HEADER OXIDOREDUCTASE 11-NOV-13 4NJM TITLE CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE BOUND 3-PHOSPHOGLYCERATE TITLE 2 DEHYDROGENASE IN ENTAMOEBA HISTOLYTICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-3-PHOSPHOGLYCERATE DEHYDROGENASE, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: D-PHOSPHOGLYCERATE DEHYDROGENASE; COMPND 5 EC: 1.1.1.95; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: D-3-PHOSPHOGLYCERATE DEHYDROGENASE, PUTATIVE; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: D-PHOSPHOGLYCERATE DEHYDROGENASE; COMPND 11 EC: 1.1.1.95; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 3 ORGANISM_TAXID: 5759; SOURCE 4 STRAIN: HM1:IMSS; SOURCE 5 GENE: EHPGDH, EHI_060860; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 13 ORGANISM_TAXID: 5759; SOURCE 14 STRAIN: HM1:IMSS; SOURCE 15 GENE: EHPGDH, EHI_060860; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS ROSSMANN FOLD, DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.K.SINGH,S.GOURINATH REVDAT 3 08-NOV-23 4NJM 1 REMARK SEQADV LINK REVDAT 2 17-JUN-15 4NJM 1 JRNL REVDAT 1 08-OCT-14 4NJM 0 JRNL AUTH R.K.SINGH,I.RAJ,R.PUJARI,S.GOURINATH JRNL TITL CRYSTAL STRUCTURES AND KINETICS OF TYPE III JRNL TITL 2 3-PHOSPHOGLYCERATE DEHYDROGENASE REVEAL CATALYSIS BY LYSINE. JRNL REF FEBS J. V. 281 5498 2014 JRNL REFN ISSN 1742-464X JRNL PMID 25294608 JRNL DOI 10.1111/FEBS.13091 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 88.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 60186 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3218 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4179 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 228 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4746 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 413 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.12000 REMARK 3 B22 (A**2) : -0.32000 REMARK 3 B33 (A**2) : -0.85000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.10000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.761 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4823 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6448 ; 1.076 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 604 ; 5.379 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 206 ;34.823 ;25.243 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 982 ;13.264 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;14.664 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 724 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3478 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4NJM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083285. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 77.150 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63428 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 88.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: DM REMARK 200 STARTING MODEL: 4NFY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 100MM TRIS PH 7.0-8.0, REMARK 280 200MM SODIUM FORMATE, 5% GLYCEROL , VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 289K, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.67300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 302 REMARK 465 HIS A 303 REMARK 465 HIS A 304 REMARK 465 HIS A 305 REMARK 465 HIS A 306 REMARK 465 HIS A 307 REMARK 465 HIS B 302 REMARK 465 HIS B 303 REMARK 465 HIS B 304 REMARK 465 HIS B 305 REMARK 465 HIS B 306 REMARK 465 HIS B 307 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 55 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 55 -121.61 -102.45 REMARK 500 ALA A 216 -97.28 -93.19 REMARK 500 ARG B 55 -120.98 -101.80 REMARK 500 ALA B 216 -96.12 -99.96 REMARK 500 ARG B 256 20.17 -143.27 REMARK 500 CYS B 284 -57.47 95.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3PG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3PG B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NJO RELATED DB: PDB DBREF 4NJM A 1 299 UNP Q76KF5 Q76KF5_ENTHI 1 299 DBREF 4NJM B 1 299 UNP Q76KF5 Q76KF5_ENTHI 1 299 SEQADV 4NJM ALA A -1 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM SER A 0 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM LEU A 300 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM GLU A 301 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS A 302 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS A 303 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS A 304 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS A 305 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS A 306 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS A 307 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM ALA B -1 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM SER B 0 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM LEU B 300 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM GLU B 301 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS B 302 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS B 303 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS B 304 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS B 305 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS B 306 UNP Q76KF5 EXPRESSION TAG SEQADV 4NJM HIS B 307 UNP Q76KF5 EXPRESSION TAG SEQRES 1 A 309 ALA SER MET LYS ILE VAL VAL ILE THR GLU LYS PRO PHE SEQRES 2 A 309 ALA GLU ASN ALA VAL LYS GLY ILE ARG GLU ILE LEU GLU SEQRES 3 A 309 LYS ALA GLY HIS GLU VAL VAL MET ILE GLU LYS TYR LYS SEQRES 4 A 309 LYS LYS GLU ASP VAL ILE GLU ARG ILE LYS ASP ALA ASP SEQRES 5 A 309 GLY VAL ILE VAL ARG SER ASP LYS ILE ASP GLU GLU ILE SEQRES 6 A 309 ILE LYS ALA GLY GLU LYS VAL LYS ILE ILE VAL ARG ALA SEQRES 7 A 309 GLY ALA GLY TYR ASP ASN ILE ASP ILE GLU ALA CYS ASN SEQRES 8 A 309 GLN GLY LYS ILE VAL VAL MET ASN THR PRO GLY GLN ASN SEQRES 9 A 309 ARG ASN GLY VAL ALA GLU LEU CYS ILE GLY MET MET ILE SEQRES 10 A 309 PHE GLY PHE ARG LYS GLY PHE LYS GLU GLY LYS GLY ARG SEQRES 11 A 309 GLU LEU LYS ASP LYS THR LEU GLY ILE CYS GLY CYS GLY SEQRES 12 A 309 TYR VAL GLY LYS ARG VAL LYS GLU ILE ALA GLU GLY ILE SEQRES 13 A 309 GLY MET LYS ILE LYS VAL TYR ASP PRO PHE ILE THR THR SEQRES 14 A 309 GLU ASN GLN VAL LYS LYS ILE GLU GLU LEU PHE GLU GLU SEQRES 15 A 309 CYS GLN VAL ILE SER LEU HIS LEU PRO LEU THR LYS GLU SEQRES 16 A 309 THR LYS GLY LYS ILE GLY TYR GLU LEU ILE LYS LYS LEU SEQRES 17 A 309 PRO TYR GLY GLY MET ILE CYS ASN THR ALA ARG LYS GLU SEQRES 18 A 309 ILE ILE ASP GLU GLU GLY LEU ILE ARG ILE MET ARG GLU SEQRES 19 A 309 ARG GLU ASP LEU ILE TYR ILE THR ASP VAL ALA PRO THR SEQRES 20 A 309 SER LYS VAL PHE ASN ASN GLU PHE LYS GLY ARG PHE PHE SEQRES 21 A 309 ALA THR PRO ILE LYS ILE GLY ALA GLU THR GLU GLU SER SEQRES 22 A 309 ASN ILE ASN ALA GLY MET ALA ALA ALA SER GLN ILE CYS SEQRES 23 A 309 ASP PHE PHE THR ASN GLY THR VAL LYS PHE GLN VAL ASN SEQRES 24 A 309 LYS PHE LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 309 ALA SER MET LYS ILE VAL VAL ILE THR GLU LYS PRO PHE SEQRES 2 B 309 ALA GLU ASN ALA VAL LYS GLY ILE ARG GLU ILE LEU GLU SEQRES 3 B 309 LYS ALA GLY HIS GLU VAL VAL MET ILE GLU LYS TYR LYS SEQRES 4 B 309 LYS LYS GLU ASP VAL ILE GLU ARG ILE LYS ASP ALA ASP SEQRES 5 B 309 GLY VAL ILE VAL ARG SER ASP LYS ILE ASP GLU GLU ILE SEQRES 6 B 309 ILE LYS ALA GLY GLU LYS VAL LYS ILE ILE VAL ARG ALA SEQRES 7 B 309 GLY ALA GLY TYR ASP ASN ILE ASP ILE GLU ALA CYS ASN SEQRES 8 B 309 GLN GLY LYS ILE VAL VAL MET ASN THR PRO GLY GLN ASN SEQRES 9 B 309 ARG ASN GLY VAL ALA GLU LEU CYS ILE GLY MET MET ILE SEQRES 10 B 309 PHE GLY PHE ARG LYS GLY PHE LYS GLU GLY LYS GLY ARG SEQRES 11 B 309 GLU LEU LYS ASP LYS THR LEU GLY ILE CYS GLY CME GLY SEQRES 12 B 309 TYR VAL GLY LYS ARG VAL LYS GLU ILE ALA GLU GLY ILE SEQRES 13 B 309 GLY MET LYS ILE LYS VAL TYR ASP PRO PHE ILE THR THR SEQRES 14 B 309 GLU ASN GLN VAL LYS LYS ILE GLU GLU LEU PHE GLU GLU SEQRES 15 B 309 CYS GLN VAL ILE SER LEU HIS LEU PRO LEU THR LYS GLU SEQRES 16 B 309 THR LYS GLY LYS ILE GLY TYR GLU LEU ILE LYS LYS LEU SEQRES 17 B 309 PRO TYR GLY GLY MET ILE CYS ASN THR ALA ARG LYS GLU SEQRES 18 B 309 ILE ILE ASP GLU GLU GLY LEU ILE ARG ILE MET ARG GLU SEQRES 19 B 309 ARG GLU ASP LEU ILE TYR ILE THR ASP VAL ALA PRO THR SEQRES 20 B 309 SER LYS VAL PHE ASN ASN GLU PHE LYS GLY ARG PHE PHE SEQRES 21 B 309 ALA THR PRO ILE LYS ILE GLY ALA GLU THR GLU GLU SER SEQRES 22 B 309 ASN ILE ASN ALA GLY MET ALA ALA ALA SER GLN ILE CYS SEQRES 23 B 309 ASP PHE PHE THR ASN GLY THR VAL LYS PHE GLN VAL ASN SEQRES 24 B 309 LYS PHE LEU GLU HIS HIS HIS HIS HIS HIS MODRES 4NJM CME B 140 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE HET CME B 140 10 HET 3PG A 401 11 HET 3PG B 401 11 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM 3PG 3-PHOSPHOGLYCERIC ACID FORMUL 2 CME C5 H11 N O3 S2 FORMUL 3 3PG 2(C3 H7 O7 P) FORMUL 5 HOH *413(H2 O) HELIX 1 1 ALA A 12 ALA A 26 1 15 HELIX 2 2 LYS A 38 ILE A 46 1 9 HELIX 3 3 ASP A 60 GLY A 67 1 8 HELIX 4 4 ASP A 84 GLY A 91 1 8 HELIX 5 5 ASN A 102 ARG A 119 1 18 HELIX 6 6 LYS A 120 LYS A 123 5 4 HELIX 7 7 GLY A 141 GLY A 155 1 15 HELIX 8 8 LYS A 173 CYS A 181 1 9 HELIX 9 9 GLY A 199 LYS A 204 1 6 HELIX 10 10 ARG A 217 ILE A 221 5 5 HELIX 11 11 ASP A 222 ARG A 233 1 12 HELIX 12 12 LYS A 247 PHE A 253 1 7 HELIX 13 13 THR A 268 GLY A 290 1 23 HELIX 14 14 ALA B 12 ALA B 26 1 15 HELIX 15 15 LYS B 38 LYS B 47 1 10 HELIX 16 16 ASP B 60 GLY B 67 1 8 HELIX 17 17 ASP B 84 GLY B 91 1 8 HELIX 18 18 ASN B 102 ARG B 119 1 18 HELIX 19 19 LYS B 120 LYS B 123 5 4 HELIX 20 20 GLY B 141 GLY B 155 1 15 HELIX 21 21 LYS B 173 CYS B 181 1 9 HELIX 22 22 GLY B 199 LYS B 204 1 6 HELIX 23 23 ARG B 217 ILE B 221 5 5 HELIX 24 24 ASP B 222 ARG B 233 1 12 HELIX 25 25 LYS B 247 PHE B 253 1 7 HELIX 26 26 THR B 268 GLY B 290 1 23 SHEET 1 A 5 GLU A 29 GLU A 34 0 SHEET 2 A 5 LYS A 2 THR A 7 1 N ILE A 3 O GLU A 29 SHEET 3 A 5 GLY A 51 VAL A 54 1 O ILE A 53 N ILE A 6 SHEET 4 A 5 ILE A 72 ARG A 75 1 O VAL A 74 N VAL A 52 SHEET 5 A 5 VAL A 94 MET A 96 1 O MET A 96 N ARG A 75 SHEET 1 B 6 LYS A 157 TYR A 161 0 SHEET 2 B 6 THR A 134 CYS A 138 1 N LEU A 135 O LYS A 157 SHEET 3 B 6 VAL A 183 LEU A 186 1 O VAL A 183 N GLY A 136 SHEET 4 B 6 MET A 211 ASN A 214 1 O CYS A 213 N ILE A 184 SHEET 5 B 6 ILE A 237 THR A 240 1 O ILE A 239 N ILE A 212 SHEET 6 B 6 PHE A 257 ALA A 259 1 O PHE A 258 N THR A 240 SHEET 1 C 5 GLU B 29 GLU B 34 0 SHEET 2 C 5 LYS B 2 THR B 7 1 N ILE B 3 O GLU B 29 SHEET 3 C 5 GLY B 51 VAL B 54 1 O ILE B 53 N ILE B 6 SHEET 4 C 5 ILE B 72 ARG B 75 1 O VAL B 74 N VAL B 52 SHEET 5 C 5 VAL B 94 MET B 96 1 O MET B 96 N ARG B 75 SHEET 1 D 6 LYS B 157 TYR B 161 0 SHEET 2 D 6 THR B 134 CYS B 138 1 N LEU B 135 O LYS B 157 SHEET 3 D 6 VAL B 183 LEU B 186 1 O VAL B 183 N GLY B 136 SHEET 4 D 6 MET B 211 ASN B 214 1 O CYS B 213 N ILE B 184 SHEET 5 D 6 ILE B 237 THR B 240 1 O ILE B 239 N ILE B 212 SHEET 6 D 6 PHE B 257 ALA B 259 1 O PHE B 258 N THR B 240 LINK C GLY B 139 N CME B 140 1555 1555 1.33 LINK C CME B 140 N GLY B 141 1555 1555 1.33 SITE 1 AC1 15 LYS A 9 ARG A 55 SER A 56 ARG A 75 SITE 2 AC1 15 GLY A 77 ALA A 78 GLY A 79 ASN A 102 SITE 3 AC1 15 ARG A 217 LYS A 263 ALA A 266 HOH A 506 SITE 4 AC1 15 HOH A 514 HOH A 521 HOH A 568 SITE 1 AC2 17 LYS B 9 ARG B 55 SER B 56 ARG B 75 SITE 2 AC2 17 GLY B 77 ALA B 78 GLY B 79 ASN B 102 SITE 3 AC2 17 ARG B 217 LYS B 263 ALA B 266 HOH B 504 SITE 4 AC2 17 HOH B 510 HOH B 523 HOH B 586 HOH B 595 SITE 5 AC2 17 HOH B 602 CRYST1 50.718 77.346 89.925 90.00 101.78 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019717 0.000000 0.004112 0.00000 SCALE2 0.000000 0.012929 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011360 0.00000