HEADER    HYDROLASE/HYDROLASE INHIBITOR           11-NOV-13   4NJS              
TITLE     CRYSTAL STRUCTURE OF MULTIDRUG-RESISTANT CLINICAL ISOLATE A02 HIV-1   
TITLE    2 PROTEASE IN COMPLEX WITH NON-PEPTIDIC INHIBITOR, GRL008              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PROTEASE;                                                  
COMPND   3 CHAIN: A, B, C, D;                                                   
COMPND   4 ENGINEERED: YES;                                                     
COMPND   5 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1;                 
SOURCE   3 ORGANISM_TAXID: 11676;                                               
SOURCE   4 GENE: POL;                                                           
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    MULTIDRUG-RESISTANCE, HIV-1 PROTEASE, NON-PEPTIDIC INHIBITOR,         
KEYWDS   2 PROTEASE INHIBITOR, DARUNAVIR ANALOG, HYDROLASE-HYDROLASE INHIBITOR  
KEYWDS   3 COMPLEX                                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.S.YEDIDI,H.GARIMELLA,J.D.KAUFMAN,D.DAS,P.T.WINGFIELD,A.K.GHOSH,     
AUTHOR   2 H.MITSUYA                                                            
REVDAT   4   28-FEB-24 4NJS    1       REMARK SEQADV                            
REVDAT   3   25-JUN-14 4NJS    1       JRNL                                     
REVDAT   2   21-MAY-14 4NJS    1       JRNL                                     
REVDAT   1   02-APR-14 4NJS    0                                                
JRNL        AUTH   R.S.YEDIDI,H.GARIMELLA,M.AOKI,H.AOKI-OGATA,D.V.DESAI,        
JRNL        AUTH 2 S.B.CHANG,D.A.DAVIS,W.S.FYVIE,J.D.KAUFMAN,D.W.SMITH,D.DAS,   
JRNL        AUTH 3 P.T.WINGFIELD,K.MAEDA,A.K.GHOSH,H.MITSUYA                    
JRNL        TITL   A CONSERVED HYDROGEN-BONDING NETWORK OF P2                   
JRNL        TITL 2 BIS-TETRAHYDROFURAN-CONTAINING HIV-1 PROTEASE INHIBITORS     
JRNL        TITL 3 (PIS) WITH A PROTEASE ACTIVE-SITE AMINO ACID BACKBONE AIDS   
JRNL        TITL 4 IN THEIR ACTIVITY AGAINST PI-RESISTANT HIV.                  
JRNL        REF    ANTIMICROB.AGENTS CHEMOTHER.  V.  58  3679 2014              
JRNL        REFN                   ISSN 0066-4804                               
JRNL        PMID   24752271                                                     
JRNL        DOI    10.1128/AAC.00107-14                                         
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (PHENIX.REFINE: 1.8.1_1168)                   
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 35.37                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.350                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.2                           
REMARK   3   NUMBER OF REFLECTIONS             : 40957                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.184                           
REMARK   3   R VALUE            (WORKING SET) : 0.182                           
REMARK   3   FREE R VALUE                     : 0.216                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.050                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2067                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 35.3772 -  4.4432    0.99     2699   138  0.1698 0.2003        
REMARK   3     2  4.4432 -  3.5277    1.00     2670   143  0.1538 0.1626        
REMARK   3     3  3.5277 -  3.0821    0.99     2621   151  0.1757 0.2050        
REMARK   3     4  3.0821 -  2.8004    0.99     2596   143  0.1975 0.2165        
REMARK   3     5  2.8004 -  2.5998    0.99     2644   112  0.2039 0.2337        
REMARK   3     6  2.5998 -  2.4465    0.99     2614   151  0.1983 0.2477        
REMARK   3     7  2.4465 -  2.3240    0.99     2627   141  0.1917 0.2451        
REMARK   3     8  2.3240 -  2.2229    0.99     2601   127  0.1898 0.2253        
REMARK   3     9  2.2229 -  2.1373    0.99     2607   127  0.1744 0.2304        
REMARK   3    10  2.1373 -  2.0636    0.99     2618   129  0.1752 0.2250        
REMARK   3    11  2.0636 -  1.9990    0.99     2576   152  0.1883 0.2218        
REMARK   3    12  1.9990 -  1.9419    0.99     2564   136  0.1971 0.2748        
REMARK   3    13  1.9419 -  1.8908    0.98     2595   153  0.2050 0.2534        
REMARK   3    14  1.8908 -  1.8447    0.97     2539   122  0.2147 0.2868        
REMARK   3    15  1.8447 -  1.8000    0.89     2319   142  0.2343 0.2703        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.190            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.620           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.007           3186                                  
REMARK   3   ANGLE     :  1.160           4330                                  
REMARK   3   CHIRALITY :  0.082            512                                  
REMARK   3   PLANARITY :  0.004            544                                  
REMARK   3   DIHEDRAL  : 15.143           1220                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4NJS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-DEC-13.                  
REMARK 100 THE DEPOSITION ID IS D_1000083291.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 01-MAR-13                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 22-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARMOSAIC 300 MM CCD               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 41155                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.800                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 35.370                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : NULL                               
REMARK 200  DATA REDUNDANCY                : 3.800                              
REMARK 200  R MERGE                    (I) : 0.09000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.84                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.09000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 23.10                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: BALBES                                                
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 53.13                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M AMMONIUM SULFATE (PRECIPITANT),    
REMARK 280  0.1 M CITRIC ACID (BUFFER), PH 5.0, VAPOR DIFFUSION, HANGING        
REMARK 280  DROP, TEMPERATURE 298K                                              
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       28.99750            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 4050 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 9400 ANGSTROM**2                        
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 4070 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 9610 ANGSTROM**2                        
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    HOH A   149     O    HOH A   174              1.89            
REMARK 500   O    HOH B   656     O    HOH B   704              1.89            
REMARK 500   O    HOH B   677     O    HOH B   706              1.89            
REMARK 500   O    HOH D   657     O    HOH D   702              1.96            
REMARK 500   O    ILE C    50     O    HOH C   114              1.97            
REMARK 500   O    HOH D   609     O    HOH D   688              2.00            
REMARK 500   O    ILE A    50     O    HOH A   114              2.05            
REMARK 500   O    HOH A   146     O    HOH A   169              2.06            
REMARK 500   NZ   LYS B    20     O    HOH B   698              2.09            
REMARK 500   O    HOH B   670     O    HOH B   688              2.12            
REMARK 500   OE2  GLU A    37     O    HOH A   157              2.13            
REMARK 500   O    HOH D   681     O    HOH D   699              2.14            
REMARK 500   O    HOH B   683     O    HOH B   701              2.14            
REMARK 500   O    HOH A   158     O    HOH B   708              2.15            
REMARK 500   O    HOH A   173     O    HOH A   174              2.19            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   OE1  GLN D    61     O    HOH C   116     2556     2.17            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    MET B  36      -50.07   -144.40                                   
REMARK 500    GLU B  37      111.67     77.66                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE G08 B 500                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE G08 D 500                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4NJT   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF MULTIDRUG-RESISTANT CLINICAL ISOLATE A02 HIV-1  
REMARK 900 PROTEASE IN COMPLEX WITH DARUNAVIR                                   
REMARK 900 RELATED ID: 4NJU   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF MULTIDRUG-RESISTANT CLINICAL ISOLATE A02 HIV-1  
REMARK 900 PROTEASE IN COMPLEX WITH TIPRANAVIR                                  
REMARK 900 RELATED ID: 4NJV   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF MULTIDRUG-RESISTANT CLINICAL ISOLATE A02 HIV-1  
REMARK 900 PROTEASE IN COMPLEX WITH RITONAVIR                                   
REMARK 900 RELATED ID: 4I8Z   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF WILD TYPE HIV-1 PROTEASE IN COMPLEX WITH NON-   
REMARK 900 PEPTIDIC INHIBITOR, GRL008                                           
REMARK 900 RELATED ID: 4HLA   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF WILD TYPE HIV-1 PROTEASE IN COMPLEX WITH        
REMARK 900 DARUNAVIR                                                            
REMARK 900 RELATED ID: 4I8W   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF WILD TYPE HIV-1 PROTEASE IN COMPLEX WITH NON-   
REMARK 900 PEPTIDIC INHIBITOR, GRL007                                           
DBREF  4NJS A    1    99  UNP    Q9J006   Q9J006_9HIV1     1     99             
DBREF  4NJS B    1    99  UNP    Q9J006   Q9J006_9HIV1     1     99             
DBREF  4NJS C    1    99  UNP    Q9J006   Q9J006_9HIV1     1     99             
DBREF  4NJS D    1    99  UNP    Q9J006   Q9J006_9HIV1     1     99             
SEQADV 4NJS CYS A   95  UNP  Q9J006    PHE    95 ENGINEERED MUTATION            
SEQADV 4NJS CYS B   95  UNP  Q9J006    PHE    95 ENGINEERED MUTATION            
SEQADV 4NJS CYS C   95  UNP  Q9J006    PHE    95 ENGINEERED MUTATION            
SEQADV 4NJS CYS D   95  UNP  Q9J006    PHE    95 ENGINEERED MUTATION            
SEQRES   1 A   99  PRO GLN ILE THR LEU TRP GLN ARG PRO ILE VAL THR ILE          
SEQRES   2 A   99  LYS VAL GLY GLY GLN LEU LYS GLU ALA LEU LEU ASP THR          
SEQRES   3 A   99  GLY ALA ASP ASP THR VAL LEU GLU ASP MET GLU LEU PRO          
SEQRES   4 A   99  GLY ARG TRP LYS PRO ARG MET ILE GLY GLY ILE GLY GLY          
SEQRES   5 A   99  PHE VAL LYS VAL ARG GLN TYR ASP GLN ILE PRO ILE GLU          
SEQRES   6 A   99  ILE CYS GLY HIS LYS VAL ILE GLY THR VAL LEU VAL GLY          
SEQRES   7 A   99  PRO THR PRO THR ASN ILE ILE GLY ARG ASN LEU MET THR          
SEQRES   8 A   99  GLN LEU GLY CYS THR LEU ASN PHE                              
SEQRES   1 B   99  PRO GLN ILE THR LEU TRP GLN ARG PRO ILE VAL THR ILE          
SEQRES   2 B   99  LYS VAL GLY GLY GLN LEU LYS GLU ALA LEU LEU ASP THR          
SEQRES   3 B   99  GLY ALA ASP ASP THR VAL LEU GLU ASP MET GLU LEU PRO          
SEQRES   4 B   99  GLY ARG TRP LYS PRO ARG MET ILE GLY GLY ILE GLY GLY          
SEQRES   5 B   99  PHE VAL LYS VAL ARG GLN TYR ASP GLN ILE PRO ILE GLU          
SEQRES   6 B   99  ILE CYS GLY HIS LYS VAL ILE GLY THR VAL LEU VAL GLY          
SEQRES   7 B   99  PRO THR PRO THR ASN ILE ILE GLY ARG ASN LEU MET THR          
SEQRES   8 B   99  GLN LEU GLY CYS THR LEU ASN PHE                              
SEQRES   1 C   99  PRO GLN ILE THR LEU TRP GLN ARG PRO ILE VAL THR ILE          
SEQRES   2 C   99  LYS VAL GLY GLY GLN LEU LYS GLU ALA LEU LEU ASP THR          
SEQRES   3 C   99  GLY ALA ASP ASP THR VAL LEU GLU ASP MET GLU LEU PRO          
SEQRES   4 C   99  GLY ARG TRP LYS PRO ARG MET ILE GLY GLY ILE GLY GLY          
SEQRES   5 C   99  PHE VAL LYS VAL ARG GLN TYR ASP GLN ILE PRO ILE GLU          
SEQRES   6 C   99  ILE CYS GLY HIS LYS VAL ILE GLY THR VAL LEU VAL GLY          
SEQRES   7 C   99  PRO THR PRO THR ASN ILE ILE GLY ARG ASN LEU MET THR          
SEQRES   8 C   99  GLN LEU GLY CYS THR LEU ASN PHE                              
SEQRES   1 D   99  PRO GLN ILE THR LEU TRP GLN ARG PRO ILE VAL THR ILE          
SEQRES   2 D   99  LYS VAL GLY GLY GLN LEU LYS GLU ALA LEU LEU ASP THR          
SEQRES   3 D   99  GLY ALA ASP ASP THR VAL LEU GLU ASP MET GLU LEU PRO          
SEQRES   4 D   99  GLY ARG TRP LYS PRO ARG MET ILE GLY GLY ILE GLY GLY          
SEQRES   5 D   99  PHE VAL LYS VAL ARG GLN TYR ASP GLN ILE PRO ILE GLU          
SEQRES   6 D   99  ILE CYS GLY HIS LYS VAL ILE GLY THR VAL LEU VAL GLY          
SEQRES   7 D   99  PRO THR PRO THR ASN ILE ILE GLY ARG ASN LEU MET THR          
SEQRES   8 D   99  GLN LEU GLY CYS THR LEU ASN PHE                              
HET    G08  B 500      40                                                       
HET    G08  D 500      40                                                       
HETNAM     G08 (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL [(2S,3R)-4-          
HETNAM   2 G08  {[(4-CARBAMOYLPHENYL)SULFONYL](2-METHYLPROPYL)AMINO}-           
HETNAM   3 G08  3-HYDROXY-1-PHENYLBUTAN-2-YL]CARBAMATE                          
FORMUL   5  G08    2(C28 H37 N3 O8 S)                                           
FORMUL   7  HOH   *378(H2 O)                                                    
HELIX    1   1 GLY A   86  THR A   91  1                                   6    
HELIX    2   2 GLN A   92  GLY A   94  5                                   3    
HELIX    3   3 GLY B   86  GLY B   94  1                                   9    
HELIX    4   4 GLY C   86  THR C   91  1                                   6    
HELIX    5   5 GLN C   92  GLY C   94  5                                   3    
HELIX    6   6 GLY D   86  GLY D   94  1                                   9    
SHEET    1   A 4 GLN A   2  ILE A   3  0                                        
SHEET    2   A 4 THR B  96  ASN B  98 -1  O  LEU B  97   N  ILE A   3           
SHEET    3   A 4 THR A  96  ASN A  98 -1  N  ASN A  98   O  THR B  96           
SHEET    4   A 4 GLN B   2  ILE B   3 -1  O  ILE B   3   N  LEU A  97           
SHEET    1   B 8 LYS A  43  GLY A  49  0                                        
SHEET    2   B 8 GLY A  52  ILE A  66 -1  O  GLN A  58   N  LYS A  43           
SHEET    3   B 8 HIS A  69  GLY A  78 -1  O  VAL A  75   N  TYR A  59           
SHEET    4   B 8 THR A  31  GLU A  34  1  N  LEU A  33   O  LEU A  76           
SHEET    5   B 8 ILE A  84  ILE A  85 -1  O  ILE A  84   N  VAL A  32           
SHEET    6   B 8 GLN A  18  LEU A  24  1  N  LEU A  23   O  ILE A  85           
SHEET    7   B 8 ILE A  10  VAL A  15 -1  N  ILE A  13   O  LYS A  20           
SHEET    8   B 8 GLY A  52  ILE A  66 -1  O  GLU A  65   N  LYS A  14           
SHEET    1   C 8 LYS B  43  GLY B  49  0                                        
SHEET    2   C 8 GLY B  52  ILE B  66 -1  O  VAL B  56   N  ARG B  45           
SHEET    3   C 8 HIS B  69  VAL B  77 -1  O  HIS B  69   N  ILE B  66           
SHEET    4   C 8 VAL B  32  LEU B  33  1  N  LEU B  33   O  LEU B  76           
SHEET    5   C 8 ILE B  84  ILE B  85 -1  O  ILE B  84   N  VAL B  32           
SHEET    6   C 8 GLN B  18  LEU B  24  1  N  LEU B  23   O  ILE B  85           
SHEET    7   C 8 ILE B  10  VAL B  15 -1  N  ILE B  13   O  LYS B  20           
SHEET    8   C 8 GLY B  52  ILE B  66 -1  O  GLU B  65   N  LYS B  14           
SHEET    1   D 4 GLN C   2  ILE C   3  0                                        
SHEET    2   D 4 THR D  96  ASN D  98 -1  O  LEU D  97   N  ILE C   3           
SHEET    3   D 4 THR C  96  ASN C  98 -1  N  ASN C  98   O  THR D  96           
SHEET    4   D 4 GLN D   2  ILE D   3 -1  O  ILE D   3   N  LEU C  97           
SHEET    1   E 8 LYS C  43  GLY C  49  0                                        
SHEET    2   E 8 GLY C  52  ILE C  66 -1  O  GLN C  58   N  LYS C  43           
SHEET    3   E 8 HIS C  69  VAL C  77 -1  O  VAL C  75   N  TYR C  59           
SHEET    4   E 8 THR C  31  LEU C  33  1  N  LEU C  33   O  LEU C  76           
SHEET    5   E 8 ILE C  84  ILE C  85 -1  O  ILE C  84   N  VAL C  32           
SHEET    6   E 8 GLN C  18  LEU C  24  1  N  LEU C  23   O  ILE C  85           
SHEET    7   E 8 ILE C  10  VAL C  15 -1  N  ILE C  13   O  LYS C  20           
SHEET    8   E 8 GLY C  52  ILE C  66 -1  O  GLU C  65   N  LYS C  14           
SHEET    1   F 8 LYS D  43  GLY D  49  0                                        
SHEET    2   F 8 GLY D  52  ILE D  66 -1  O  VAL D  56   N  ARG D  45           
SHEET    3   F 8 HIS D  69  VAL D  77 -1  O  VAL D  71   N  ILE D  64           
SHEET    4   F 8 VAL D  32  LEU D  33  1  N  LEU D  33   O  LEU D  76           
SHEET    5   F 8 ILE D  84  ILE D  85 -1  O  ILE D  84   N  VAL D  32           
SHEET    6   F 8 GLN D  18  LEU D  24  1  N  LEU D  23   O  ILE D  85           
SHEET    7   F 8 ILE D  10  VAL D  15 -1  N  ILE D  13   O  LYS D  20           
SHEET    8   F 8 GLY D  52  ILE D  66 -1  O  GLU D  65   N  LYS D  14           
SITE     1 AC1 20 ASP A  25  GLY A  27  ALA A  28  ASP A  29                    
SITE     2 AC1 20 ASP A  30  ILE A  47  GLY A  48  GLY A  49                    
SITE     3 AC1 20 THR A  82  ILE A  84  ASP B  25  GLY B  27                    
SITE     4 AC1 20 ALA B  28  ASP B  29  ASP B  30  GLY B  48                    
SITE     5 AC1 20 GLY B  49  ILE B  50  HOH B 601  HOH B 628                    
SITE     1 AC2 19 ASP C  25  GLY C  27  ALA C  28  ASP C  29                    
SITE     2 AC2 19 ASP C  30  ILE C  47  GLY C  48  GLY C  49                    
SITE     3 AC2 19 ILE C  84  HOH C 128  HOH C 172  ASP D  25                    
SITE     4 AC2 19 GLY D  27  ALA D  28  ASP D  29  ASP D  30                    
SITE     5 AC2 19 GLY D  48  GLY D  49  ILE D  50                               
CRYST1   44.632   57.995   88.111  90.00  90.03  90.00 P 1 21 1      8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.022405  0.000000  0.000013        0.00000                         
SCALE2      0.000000  0.017243  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.011349        0.00000