HEADER CYTOKINE 12-NOV-13 4NKI TITLE CRYSTAL STRUCTURE OF A FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB LIGHT CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB HEAVY CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NONOCLONAL ANTIBODY, IMMUNOGLOBULIN, ANTIBODY, PD-L1, SOLUBLE KEYWDS 2 PROTEIN, CYTOKINE EXPDTA X-RAY DIFFRACTION AUTHOR X.JIANG REVDAT 3 06-NOV-24 4NKI 1 REMARK REVDAT 2 22-APR-15 4NKI 1 JRNL REVDAT 1 12-NOV-14 4NKI 0 JRNL AUTH G.HAO,J.S.WESOLOWSKI,X.JIANG,S.LAUDER,V.D.SOOD JRNL TITL EPITOPE CHARACTERIZATION OF AN ANTI-PD-L1 ANTIBODY USING JRNL TITL 2 ORTHOGONAL APPROACHES. JRNL REF J.MOL.RECOGNIT. V. 28 269 2015 JRNL REFN ISSN 0952-3499 JRNL PMID 25664688 JRNL DOI 10.1002/JMR.2418 REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 20258 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.140 REMARK 3 FREE R VALUE TEST SET COUNT : 1097 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 11 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.41 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.53 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2662 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.2362 REMARK 3 BIN FREE R VALUE SET COUNT : 136 REMARK 3 BIN FREE R VALUE : 0.2544 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3220 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 136 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.46530 REMARK 3 B22 (A**2) : 0.46530 REMARK 3 B33 (A**2) : -0.93060 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.676 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.352 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.313 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 33.841 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 221 REMARK 3 ORIGIN FOR THE GROUP (A): 14.4822 57.5769 4.5704 REMARK 3 T TENSOR REMARK 3 T11: -0.1443 T22: 0.0569 REMARK 3 T33: -0.1535 T12: 0.0205 REMARK 3 T13: -0.0329 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 1.1594 L22: 1.0515 REMARK 3 L33: 1.3184 L12: 0.4237 REMARK 3 L13: -0.6170 L23: -0.3279 REMARK 3 S TENSOR REMARK 3 S11: 0.0184 S12: 0.1001 S13: 0.1091 REMARK 3 S21: 0.0164 S22: 0.0427 S23: -0.0487 REMARK 3 S31: -0.0955 S32: -0.1482 S33: -0.0611 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 2 L 213 REMARK 3 ORIGIN FOR THE GROUP (A): 27.0101 45.3354 8.4559 REMARK 3 T TENSOR REMARK 3 T11: -0.0938 T22: -0.0844 REMARK 3 T33: -0.2026 T12: 0.0050 REMARK 3 T13: -0.0745 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 2.7591 L22: 1.4877 REMARK 3 L33: 0.5706 L12: 0.2887 REMARK 3 L13: -0.8268 L23: -0.2102 REMARK 3 S TENSOR REMARK 3 S11: -0.1283 S12: 0.0082 S13: -0.1156 REMARK 3 S21: -0.2641 S22: 0.0649 S23: -0.1942 REMARK 3 S31: 0.1290 S32: 0.0223 S33: 0.0634 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4NKI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083317. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20258 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.410 REMARK 200 RESOLUTION RANGE LOW (A) : 34.709 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE CRYSTALS WERE GROWN USING HANGING REMARK 280 -DROP VAPOR DIFFUSION AT 20 C BY MIXING EQUAL VOLUMES OF THE REMARK 280 PURIFIED PROTEIN AND THE CRYSTALLIZATION CONDITION OF 0.2M REMARK 280 LITHIUM SULFATE MONOHYDRATE AND 20% (WT/VOL) POLYETHYLENE GLYCOL REMARK 280 3350. , VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.46000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 59.19000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 19.73000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.46000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 19.73000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.19000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 222 REMARK 465 CYS H 223 REMARK 465 ALA H 224 REMARK 465 ALA H 225 REMARK 465 ALA H 226 REMARK 465 HIS H 227 REMARK 465 HIS H 228 REMARK 465 HIS H 229 REMARK 465 HIS H 230 REMARK 465 HIS H 231 REMARK 465 HIS H 232 REMARK 465 GLN L 1 REMARK 465 GLU L 214 REMARK 465 CYS L 215 REMARK 465 SER L 216 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 134 130.34 -34.22 REMARK 500 THR H 138 3.74 -62.98 REMARK 500 ASP L 28 -97.64 -141.25 REMARK 500 ASN L 33 32.40 -91.29 REMARK 500 TYR L 34 51.69 -107.09 REMARK 500 VAL L 53 -55.57 78.65 REMARK 500 ALA L 86 -176.57 -172.49 REMARK 500 SER L 97 -2.88 73.16 REMARK 500 SER L 157 145.83 65.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO H 302 DBREF 4NKI H 1 232 PDB 4NKI 4NKI 1 232 DBREF 4NKI L 1 216 PDB 4NKI 4NKI 1 216 SEQRES 1 H 232 GLU VAL GLN LEU LEU GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 232 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 232 PHE THR PHE SER SER TYR ILE MET MET TRP VAL ARG GLN SEQRES 4 H 232 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER SER ILE TYR SEQRES 5 H 232 PRO SER GLY GLY ILE THR PHE TYR ALA ASP THR VAL LYS SEQRES 6 H 232 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 232 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 232 ALA VAL TYR TYR CYS ALA ARG ILE LYS LEU GLY THR VAL SEQRES 9 H 232 THR THR VAL ASP TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 H 232 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 H 232 LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA SEQRES 12 H 232 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 H 232 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 H 232 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 H 232 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 H 232 LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS SEQRES 17 H 232 PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SEQRES 18 H 232 SER CYS ALA ALA ALA HIS HIS HIS HIS HIS HIS SEQRES 1 L 216 GLN SER ALA LEU THR GLN PRO ALA SER VAL SER GLY SER SEQRES 2 L 216 PRO GLY GLN SER ILE THR ILE SER CYS THR GLY THR SER SEQRES 3 L 216 SER ASP VAL GLY GLY TYR ASN TYR VAL SER TRP TYR GLN SEQRES 4 L 216 GLN HIS PRO GLY LYS ALA PRO LYS LEU MET ILE TYR ASP SEQRES 5 L 216 VAL SER ASN ARG PRO SER GLY VAL SER ASN ARG PHE SER SEQRES 6 L 216 GLY SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER SEQRES 7 L 216 GLY LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS SER SEQRES 8 L 216 SER TYR THR SER SER SER THR ARG VAL PHE GLY THR GLY SEQRES 9 L 216 THR LYS VAL THR VAL LEU GLY GLN PRO LYS ALA ASN PRO SEQRES 10 L 216 THR VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 L 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 L 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP GLY SEQRES 13 L 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR LYS PRO SER SEQRES 14 L 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 L 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 L 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 L 216 THR VAL ALA PRO THR GLU CYS SER HET EDO H 301 4 HET EDO H 302 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 HOH *136(H2 O) HELIX 1 1 THR H 28 TYR H 32 5 5 HELIX 2 2 ARG H 87 THR H 91 5 5 HELIX 3 3 SER H 163 ALA H 165 5 3 HELIX 4 4 SER H 194 LEU H 196 5 3 HELIX 5 5 LYS H 208 ASN H 211 5 4 HELIX 6 6 GLN L 81 GLU L 85 5 5 HELIX 7 7 SER L 125 ALA L 131 1 7 HELIX 8 8 THR L 185 HIS L 192 1 8 SHEET 1 A 4 GLN H 3 SER H 7 0 SHEET 2 A 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 A 4 THR H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 A 4 PHE H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 B 6 GLY H 10 VAL H 12 0 SHEET 2 B 6 THR H 114 VAL H 118 1 O THR H 117 N GLY H 10 SHEET 3 B 6 ALA H 92 ILE H 99 -1 N TYR H 94 O THR H 114 SHEET 4 B 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 B 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 B 6 THR H 58 TYR H 60 -1 O PHE H 59 N SER H 50 SHEET 1 C 4 GLY H 10 VAL H 12 0 SHEET 2 C 4 THR H 114 VAL H 118 1 O THR H 117 N GLY H 10 SHEET 3 C 4 ALA H 92 ILE H 99 -1 N TYR H 94 O THR H 114 SHEET 4 C 4 VAL H 107 TRP H 110 -1 O TYR H 109 N ARG H 98 SHEET 1 D 4 SER H 127 LEU H 131 0 SHEET 2 D 4 THR H 142 TYR H 152 -1 O LEU H 148 N PHE H 129 SHEET 3 D 4 TYR H 183 PRO H 192 -1 O LEU H 185 N VAL H 149 SHEET 4 D 4 VAL H 170 THR H 172 -1 N HIS H 171 O VAL H 188 SHEET 1 E 4 SER H 127 LEU H 131 0 SHEET 2 E 4 THR H 142 TYR H 152 -1 O LEU H 148 N PHE H 129 SHEET 3 E 4 TYR H 183 PRO H 192 -1 O LEU H 185 N VAL H 149 SHEET 4 E 4 VAL H 176 LEU H 177 -1 N VAL H 176 O SER H 184 SHEET 1 F 3 THR H 158 TRP H 161 0 SHEET 2 F 3 TYR H 201 HIS H 207 -1 O ASN H 204 N SER H 160 SHEET 3 F 3 THR H 212 VAL H 218 -1 O VAL H 218 N TYR H 201 SHEET 1 G 5 SER L 9 GLY L 12 0 SHEET 2 G 5 THR L 105 VAL L 109 1 O THR L 108 N GLY L 12 SHEET 3 G 5 ALA L 86 TYR L 93 -1 N ALA L 86 O VAL L 107 SHEET 4 G 5 VAL L 35 GLN L 40 -1 N GLN L 40 O ASP L 87 SHEET 5 G 5 LYS L 47 ILE L 50 -1 O ILE L 50 N TRP L 37 SHEET 1 H 4 SER L 9 GLY L 12 0 SHEET 2 H 4 THR L 105 VAL L 109 1 O THR L 108 N GLY L 12 SHEET 3 H 4 ALA L 86 TYR L 93 -1 N ALA L 86 O VAL L 107 SHEET 4 H 4 ARG L 99 PHE L 101 -1 O VAL L 100 N SER L 92 SHEET 1 I 3 ILE L 18 THR L 23 0 SHEET 2 I 3 THR L 72 ILE L 77 -1 O ALA L 73 N CYS L 22 SHEET 3 I 3 PHE L 64 SER L 69 -1 N SER L 69 O THR L 72 SHEET 1 J 4 THR L 118 PHE L 122 0 SHEET 2 J 4 ALA L 134 PHE L 143 -1 O LEU L 139 N THR L 120 SHEET 3 J 4 TYR L 176 LEU L 184 -1 O TYR L 176 N PHE L 143 SHEET 4 J 4 VAL L 163 THR L 165 -1 N GLU L 164 O TYR L 181 SHEET 1 K 4 THR L 118 PHE L 122 0 SHEET 2 K 4 ALA L 134 PHE L 143 -1 O LEU L 139 N THR L 120 SHEET 3 K 4 TYR L 176 LEU L 184 -1 O TYR L 176 N PHE L 143 SHEET 4 K 4 SER L 169 LYS L 170 -1 N SER L 169 O ALA L 177 SHEET 1 L 3 THR L 149 ALA L 154 0 SHEET 2 L 3 TYR L 195 HIS L 201 -1 O THR L 200 N THR L 149 SHEET 3 L 3 SER L 204 VAL L 210 -1 O LYS L 208 N CYS L 197 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.07 SSBOND 2 CYS H 147 CYS H 203 1555 1555 2.02 SSBOND 3 CYS L 22 CYS L 90 1555 1555 2.04 SSBOND 4 CYS L 138 CYS L 197 1555 1555 2.04 CISPEP 1 PHE H 153 PRO H 154 0 -7.28 CISPEP 2 GLU H 155 PRO H 156 0 -1.72 CISPEP 3 TYR L 144 PRO L 145 0 -2.09 SITE 1 AC1 3 GLY H 66 PHE H 68 THR H 69 SITE 1 AC2 3 THR H 91 VAL H 118 HOH H 452 CRYST1 115.944 115.944 78.920 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008625 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012671 0.00000