data_4NLN # _entry.id 4NLN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NLN pdb_00004nln 10.2210/pdb4nln/pdb NDB NA2772 ? ? RCSB RCSB083357 ? ? WWPDB D_1000083357 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-01-22 2 'Structure model' 1 1 2014-02-12 3 'Structure model' 1 2 2014-03-19 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.value' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 40 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 41 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4NLN _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-11-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1BPX . unspecified PDB 3ISB . unspecified PDB 4NLK . unspecified PDB 4NLZ . unspecified PDB 4NM1 . unspecified PDB 4NM2 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Koag, M.-C.' 1 'Min, K.' 2 'Monzingo, A.F.' 3 'Lee, S.' 4 # _citation.id primary _citation.title 'Structural basis for promutagenicity of 8-halogenated Guanine.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 289 _citation.page_first 6289 _citation.page_last 6298 _citation.year 2014 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24425881 _citation.pdbx_database_id_DOI 10.1074/jbc.M113.537803 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Koag, M.C.' 1 ? primary 'Min, K.' 2 ? primary 'Lee, S.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 37536.770 1 '2.7.7.7, 4.2.99.-' ? ? ? 2 polymer syn "5'-D(*CP*CP*GP*AP*CP*(BGM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'" 4923.040 1 ? ? ? template 3 polymer syn "5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*AP*C)-3'" 3374.210 1 ? ? ? 'up primer' 4 polymer syn "5'-D(P*GP*TP*CP*GP*G)-3'" 1536.035 1 ? ? ? 'down primer' 5 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 7 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 8 water nat water 18.015 61 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;PQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLE KIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEV KKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKND EKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWK YREPKDRSE ; ;PQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLE KIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEV KKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKND EKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWK YREPKDRSE ; A ? 2 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(BGM)(DT)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACGTCGCATCAGC T ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DA)(DC)' GCTGATGCGAC P ? 4 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'SODIUM ION' NA 7 'PHOSPHATE ION' PO4 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 GLU n 1 4 THR n 1 5 LEU n 1 6 ASN n 1 7 GLY n 1 8 GLY n 1 9 ILE n 1 10 THR n 1 11 ASP n 1 12 MET n 1 13 LEU n 1 14 THR n 1 15 GLU n 1 16 LEU n 1 17 ALA n 1 18 ASN n 1 19 PHE n 1 20 GLU n 1 21 LYS n 1 22 ASN n 1 23 VAL n 1 24 SER n 1 25 GLN n 1 26 ALA n 1 27 ILE n 1 28 HIS n 1 29 LYS n 1 30 TYR n 1 31 ASN n 1 32 ALA n 1 33 TYR n 1 34 ARG n 1 35 LYS n 1 36 ALA n 1 37 ALA n 1 38 SER n 1 39 VAL n 1 40 ILE n 1 41 ALA n 1 42 LYS n 1 43 TYR n 1 44 PRO n 1 45 HIS n 1 46 LYS n 1 47 ILE n 1 48 LYS n 1 49 SER n 1 50 GLY n 1 51 ALA n 1 52 GLU n 1 53 ALA n 1 54 LYS n 1 55 LYS n 1 56 LEU n 1 57 PRO n 1 58 GLY n 1 59 VAL n 1 60 GLY n 1 61 THR n 1 62 LYS n 1 63 ILE n 1 64 ALA n 1 65 GLU n 1 66 LYS n 1 67 ILE n 1 68 ASP n 1 69 GLU n 1 70 PHE n 1 71 LEU n 1 72 ALA n 1 73 THR n 1 74 GLY n 1 75 LYS n 1 76 LEU n 1 77 ARG n 1 78 LYS n 1 79 LEU n 1 80 GLU n 1 81 LYS n 1 82 ILE n 1 83 ARG n 1 84 GLN n 1 85 ASP n 1 86 ASP n 1 87 THR n 1 88 SER n 1 89 SER n 1 90 SER n 1 91 ILE n 1 92 ASN n 1 93 PHE n 1 94 LEU n 1 95 THR n 1 96 ARG n 1 97 VAL n 1 98 SER n 1 99 GLY n 1 100 ILE n 1 101 GLY n 1 102 PRO n 1 103 SER n 1 104 ALA n 1 105 ALA n 1 106 ARG n 1 107 LYS n 1 108 PHE n 1 109 VAL n 1 110 ASP n 1 111 GLU n 1 112 GLY n 1 113 ILE n 1 114 LYS n 1 115 THR n 1 116 LEU n 1 117 GLU n 1 118 ASP n 1 119 LEU n 1 120 ARG n 1 121 LYS n 1 122 ASN n 1 123 GLU n 1 124 ASP n 1 125 LYS n 1 126 LEU n 1 127 ASN n 1 128 HIS n 1 129 HIS n 1 130 GLN n 1 131 ARG n 1 132 ILE n 1 133 GLY n 1 134 LEU n 1 135 LYS n 1 136 TYR n 1 137 PHE n 1 138 GLY n 1 139 ASP n 1 140 PHE n 1 141 GLU n 1 142 LYS n 1 143 ARG n 1 144 ILE n 1 145 PRO n 1 146 ARG n 1 147 GLU n 1 148 GLU n 1 149 MET n 1 150 LEU n 1 151 GLN n 1 152 MET n 1 153 GLN n 1 154 ASP n 1 155 ILE n 1 156 VAL n 1 157 LEU n 1 158 ASN n 1 159 GLU n 1 160 VAL n 1 161 LYS n 1 162 LYS n 1 163 VAL n 1 164 ASP n 1 165 SER n 1 166 GLU n 1 167 TYR n 1 168 ILE n 1 169 ALA n 1 170 THR n 1 171 VAL n 1 172 CYS n 1 173 GLY n 1 174 SER n 1 175 PHE n 1 176 ARG n 1 177 ARG n 1 178 GLY n 1 179 ALA n 1 180 GLU n 1 181 SER n 1 182 SER n 1 183 GLY n 1 184 ASP n 1 185 MET n 1 186 ASP n 1 187 VAL n 1 188 LEU n 1 189 LEU n 1 190 THR n 1 191 HIS n 1 192 PRO n 1 193 SER n 1 194 PHE n 1 195 THR n 1 196 SER n 1 197 GLU n 1 198 SER n 1 199 THR n 1 200 LYS n 1 201 GLN n 1 202 PRO n 1 203 LYS n 1 204 LEU n 1 205 LEU n 1 206 HIS n 1 207 GLN n 1 208 VAL n 1 209 VAL n 1 210 GLU n 1 211 GLN n 1 212 LEU n 1 213 GLN n 1 214 LYS n 1 215 VAL n 1 216 HIS n 1 217 PHE n 1 218 ILE n 1 219 THR n 1 220 ASP n 1 221 THR n 1 222 LEU n 1 223 SER n 1 224 LYS n 1 225 GLY n 1 226 GLU n 1 227 THR n 1 228 LYS n 1 229 PHE n 1 230 MET n 1 231 GLY n 1 232 VAL n 1 233 CYS n 1 234 GLN n 1 235 LEU n 1 236 PRO n 1 237 SER n 1 238 LYS n 1 239 ASN n 1 240 ASP n 1 241 GLU n 1 242 LYS n 1 243 GLU n 1 244 TYR n 1 245 PRO n 1 246 HIS n 1 247 ARG n 1 248 ARG n 1 249 ILE n 1 250 ASP n 1 251 ILE n 1 252 ARG n 1 253 LEU n 1 254 ILE n 1 255 PRO n 1 256 LYS n 1 257 ASP n 1 258 GLN n 1 259 TYR n 1 260 TYR n 1 261 CYS n 1 262 GLY n 1 263 VAL n 1 264 LEU n 1 265 TYR n 1 266 PHE n 1 267 THR n 1 268 GLY n 1 269 SER n 1 270 ASP n 1 271 ILE n 1 272 PHE n 1 273 ASN n 1 274 LYS n 1 275 ASN n 1 276 MET n 1 277 ARG n 1 278 ALA n 1 279 HIS n 1 280 ALA n 1 281 LEU n 1 282 GLU n 1 283 LYS n 1 284 GLY n 1 285 PHE n 1 286 THR n 1 287 ILE n 1 288 ASN n 1 289 GLU n 1 290 TYR n 1 291 THR n 1 292 ILE n 1 293 ARG n 1 294 PRO n 1 295 LEU n 1 296 GLY n 1 297 VAL n 1 298 THR n 1 299 GLY n 1 300 VAL n 1 301 ALA n 1 302 GLY n 1 303 GLU n 1 304 PRO n 1 305 LEU n 1 306 PRO n 1 307 VAL n 1 308 ASP n 1 309 SER n 1 310 GLU n 1 311 LYS n 1 312 ASP n 1 313 ILE n 1 314 PHE n 1 315 ASP n 1 316 TYR n 1 317 ILE n 1 318 GLN n 1 319 TRP n 1 320 LYS n 1 321 TYR n 1 322 ARG n 1 323 GLU n 1 324 PRO n 1 325 LYS n 1 326 ASP n 1 327 ARG n 1 328 SER n 1 329 GLU n 2 1 DC n 2 2 DC n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 BGM n 2 7 DT n 2 8 DC n 2 9 DG n 2 10 DC n 2 11 DA n 2 12 DT n 2 13 DC n 2 14 DA n 2 15 DG n 2 16 DC n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DA n 3 11 DC n 4 1 DG n 4 2 DT n 4 3 DC n 4 4 DG n 4 5 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGM 'DNA linking' n "8-BROMO-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H13 Br N5 O7 P' 426.117 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 7 7 PRO PRO A . n A 1 2 GLN 2 8 8 GLN GLN A . n A 1 3 GLU 3 9 9 GLU GLU A . n A 1 4 THR 4 10 10 THR THR A . n A 1 5 LEU 5 11 11 LEU LEU A . n A 1 6 ASN 6 12 12 ASN ASN A . n A 1 7 GLY 7 13 13 GLY GLY A . n A 1 8 GLY 8 14 14 GLY GLY A . n A 1 9 ILE 9 15 15 ILE ILE A . n A 1 10 THR 10 16 16 THR THR A . n A 1 11 ASP 11 17 17 ASP ASP A . n A 1 12 MET 12 18 18 MET MET A . n A 1 13 LEU 13 19 19 LEU LEU A . n A 1 14 THR 14 20 20 THR THR A . n A 1 15 GLU 15 21 21 GLU GLU A . n A 1 16 LEU 16 22 22 LEU LEU A . n A 1 17 ALA 17 23 23 ALA ALA A . n A 1 18 ASN 18 24 24 ASN ASN A . n A 1 19 PHE 19 25 25 PHE PHE A . n A 1 20 GLU 20 26 26 GLU GLU A . n A 1 21 LYS 21 27 27 LYS LYS A . n A 1 22 ASN 22 28 28 ASN ASN A . n A 1 23 VAL 23 29 29 VAL VAL A . n A 1 24 SER 24 30 30 SER SER A . n A 1 25 GLN 25 31 31 GLN GLN A . n A 1 26 ALA 26 32 32 ALA ALA A . n A 1 27 ILE 27 33 33 ILE ILE A . n A 1 28 HIS 28 34 34 HIS HIS A . n A 1 29 LYS 29 35 35 LYS LYS A . n A 1 30 TYR 30 36 36 TYR TYR A . n A 1 31 ASN 31 37 37 ASN ASN A . n A 1 32 ALA 32 38 38 ALA ALA A . n A 1 33 TYR 33 39 39 TYR TYR A . n A 1 34 ARG 34 40 40 ARG ARG A . n A 1 35 LYS 35 41 41 LYS LYS A . n A 1 36 ALA 36 42 42 ALA ALA A . n A 1 37 ALA 37 43 43 ALA ALA A . n A 1 38 SER 38 44 44 SER SER A . n A 1 39 VAL 39 45 45 VAL VAL A . n A 1 40 ILE 40 46 46 ILE ILE A . n A 1 41 ALA 41 47 47 ALA ALA A . n A 1 42 LYS 42 48 48 LYS LYS A . n A 1 43 TYR 43 49 49 TYR TYR A . n A 1 44 PRO 44 50 50 PRO PRO A . n A 1 45 HIS 45 51 51 HIS HIS A . n A 1 46 LYS 46 52 52 LYS LYS A . n A 1 47 ILE 47 53 53 ILE ILE A . n A 1 48 LYS 48 54 54 LYS LYS A . n A 1 49 SER 49 55 55 SER SER A . n A 1 50 GLY 50 56 56 GLY GLY A . n A 1 51 ALA 51 57 57 ALA ALA A . n A 1 52 GLU 52 58 58 GLU GLU A . n A 1 53 ALA 53 59 59 ALA ALA A . n A 1 54 LYS 54 60 60 LYS LYS A . n A 1 55 LYS 55 61 61 LYS LYS A . n A 1 56 LEU 56 62 62 LEU LEU A . n A 1 57 PRO 57 63 63 PRO PRO A . n A 1 58 GLY 58 64 64 GLY GLY A . n A 1 59 VAL 59 65 65 VAL VAL A . n A 1 60 GLY 60 66 66 GLY GLY A . n A 1 61 THR 61 67 67 THR THR A . n A 1 62 LYS 62 68 68 LYS LYS A . n A 1 63 ILE 63 69 69 ILE ILE A . n A 1 64 ALA 64 70 70 ALA ALA A . n A 1 65 GLU 65 71 71 GLU GLU A . n A 1 66 LYS 66 72 72 LYS LYS A . n A 1 67 ILE 67 73 73 ILE ILE A . n A 1 68 ASP 68 74 74 ASP ASP A . n A 1 69 GLU 69 75 75 GLU GLU A . n A 1 70 PHE 70 76 76 PHE PHE A . n A 1 71 LEU 71 77 77 LEU LEU A . n A 1 72 ALA 72 78 78 ALA ALA A . n A 1 73 THR 73 79 79 THR THR A . n A 1 74 GLY 74 80 80 GLY GLY A . n A 1 75 LYS 75 81 81 LYS LYS A . n A 1 76 LEU 76 82 82 LEU LEU A . n A 1 77 ARG 77 83 83 ARG ARG A . n A 1 78 LYS 78 84 84 LYS LYS A . n A 1 79 LEU 79 85 85 LEU LEU A . n A 1 80 GLU 80 86 86 GLU GLU A . n A 1 81 LYS 81 87 87 LYS LYS A . n A 1 82 ILE 82 88 88 ILE ILE A . n A 1 83 ARG 83 89 89 ARG ARG A . n A 1 84 GLN 84 90 90 GLN GLN A . n A 1 85 ASP 85 91 91 ASP ASP A . n A 1 86 ASP 86 92 92 ASP ASP A . n A 1 87 THR 87 93 93 THR THR A . n A 1 88 SER 88 94 94 SER SER A . n A 1 89 SER 89 95 95 SER SER A . n A 1 90 SER 90 96 96 SER SER A . n A 1 91 ILE 91 97 97 ILE ILE A . n A 1 92 ASN 92 98 98 ASN ASN A . n A 1 93 PHE 93 99 99 PHE PHE A . n A 1 94 LEU 94 100 100 LEU LEU A . n A 1 95 THR 95 101 101 THR THR A . n A 1 96 ARG 96 102 102 ARG ARG A . n A 1 97 VAL 97 103 103 VAL VAL A . n A 1 98 SER 98 104 104 SER SER A . n A 1 99 GLY 99 105 105 GLY GLY A . n A 1 100 ILE 100 106 106 ILE ILE A . n A 1 101 GLY 101 107 107 GLY GLY A . n A 1 102 PRO 102 108 108 PRO PRO A . n A 1 103 SER 103 109 109 SER SER A . n A 1 104 ALA 104 110 110 ALA ALA A . n A 1 105 ALA 105 111 111 ALA ALA A . n A 1 106 ARG 106 112 112 ARG ARG A . n A 1 107 LYS 107 113 113 LYS LYS A . n A 1 108 PHE 108 114 114 PHE PHE A . n A 1 109 VAL 109 115 115 VAL VAL A . n A 1 110 ASP 110 116 116 ASP ASP A . n A 1 111 GLU 111 117 117 GLU GLU A . n A 1 112 GLY 112 118 118 GLY GLY A . n A 1 113 ILE 113 119 119 ILE ILE A . n A 1 114 LYS 114 120 120 LYS LYS A . n A 1 115 THR 115 121 121 THR THR A . n A 1 116 LEU 116 122 122 LEU LEU A . n A 1 117 GLU 117 123 123 GLU GLU A . n A 1 118 ASP 118 124 124 ASP ASP A . n A 1 119 LEU 119 125 125 LEU LEU A . n A 1 120 ARG 120 126 126 ARG ARG A . n A 1 121 LYS 121 127 127 LYS LYS A . n A 1 122 ASN 122 128 128 ASN ASN A . n A 1 123 GLU 123 129 129 GLU GLU A . n A 1 124 ASP 124 130 130 ASP ASP A . n A 1 125 LYS 125 131 131 LYS LYS A . n A 1 126 LEU 126 132 132 LEU LEU A . n A 1 127 ASN 127 133 133 ASN ASN A . n A 1 128 HIS 128 134 134 HIS HIS A . n A 1 129 HIS 129 135 135 HIS HIS A . n A 1 130 GLN 130 136 136 GLN GLN A . n A 1 131 ARG 131 137 137 ARG ARG A . n A 1 132 ILE 132 138 138 ILE ILE A . n A 1 133 GLY 133 139 139 GLY GLY A . n A 1 134 LEU 134 140 140 LEU LEU A . n A 1 135 LYS 135 141 141 LYS LYS A . n A 1 136 TYR 136 142 142 TYR TYR A . n A 1 137 PHE 137 143 143 PHE PHE A . n A 1 138 GLY 138 144 144 GLY GLY A . n A 1 139 ASP 139 145 145 ASP ASP A . n A 1 140 PHE 140 146 146 PHE PHE A . n A 1 141 GLU 141 147 147 GLU GLU A . n A 1 142 LYS 142 148 148 LYS LYS A . n A 1 143 ARG 143 149 149 ARG ARG A . n A 1 144 ILE 144 150 150 ILE ILE A . n A 1 145 PRO 145 151 151 PRO PRO A . n A 1 146 ARG 146 152 152 ARG ARG A . n A 1 147 GLU 147 153 153 GLU GLU A . n A 1 148 GLU 148 154 154 GLU GLU A . n A 1 149 MET 149 155 155 MET MET A . n A 1 150 LEU 150 156 156 LEU LEU A . n A 1 151 GLN 151 157 157 GLN GLN A . n A 1 152 MET 152 158 158 MET MET A . n A 1 153 GLN 153 159 159 GLN GLN A . n A 1 154 ASP 154 160 160 ASP ASP A . n A 1 155 ILE 155 161 161 ILE ILE A . n A 1 156 VAL 156 162 162 VAL VAL A . n A 1 157 LEU 157 163 163 LEU LEU A . n A 1 158 ASN 158 164 164 ASN ASN A . n A 1 159 GLU 159 165 165 GLU GLU A . n A 1 160 VAL 160 166 166 VAL VAL A . n A 1 161 LYS 161 167 167 LYS LYS A . n A 1 162 LYS 162 168 168 LYS LYS A . n A 1 163 VAL 163 169 169 VAL VAL A . n A 1 164 ASP 164 170 170 ASP ASP A . n A 1 165 SER 165 171 171 SER SER A . n A 1 166 GLU 166 172 172 GLU GLU A . n A 1 167 TYR 167 173 173 TYR TYR A . n A 1 168 ILE 168 174 174 ILE ILE A . n A 1 169 ALA 169 175 175 ALA ALA A . n A 1 170 THR 170 176 176 THR THR A . n A 1 171 VAL 171 177 177 VAL VAL A . n A 1 172 CYS 172 178 178 CYS CYS A . n A 1 173 GLY 173 179 179 GLY GLY A . n A 1 174 SER 174 180 180 SER SER A . n A 1 175 PHE 175 181 181 PHE PHE A . n A 1 176 ARG 176 182 182 ARG ARG A . n A 1 177 ARG 177 183 183 ARG ARG A . n A 1 178 GLY 178 184 184 GLY GLY A . n A 1 179 ALA 179 185 185 ALA ALA A . n A 1 180 GLU 180 186 186 GLU GLU A . n A 1 181 SER 181 187 187 SER SER A . n A 1 182 SER 182 188 188 SER SER A . n A 1 183 GLY 183 189 189 GLY GLY A . n A 1 184 ASP 184 190 190 ASP ASP A . n A 1 185 MET 185 191 191 MET MET A . n A 1 186 ASP 186 192 192 ASP ASP A . n A 1 187 VAL 187 193 193 VAL VAL A . n A 1 188 LEU 188 194 194 LEU LEU A . n A 1 189 LEU 189 195 195 LEU LEU A . n A 1 190 THR 190 196 196 THR THR A . n A 1 191 HIS 191 197 197 HIS HIS A . n A 1 192 PRO 192 198 198 PRO PRO A . n A 1 193 SER 193 199 199 SER SER A . n A 1 194 PHE 194 200 200 PHE PHE A . n A 1 195 THR 195 201 201 THR THR A . n A 1 196 SER 196 202 202 SER SER A . n A 1 197 GLU 197 203 203 GLU GLU A . n A 1 198 SER 198 204 204 SER SER A . n A 1 199 THR 199 205 ? ? ? A . n A 1 200 LYS 200 206 ? ? ? A . n A 1 201 GLN 201 207 ? ? ? A . n A 1 202 PRO 202 208 208 PRO PRO A . n A 1 203 LYS 203 209 209 LYS LYS A . n A 1 204 LEU 204 210 210 LEU LEU A . n A 1 205 LEU 205 211 211 LEU LEU A . n A 1 206 HIS 206 212 212 HIS HIS A . n A 1 207 GLN 207 213 213 GLN GLN A . n A 1 208 VAL 208 214 214 VAL VAL A . n A 1 209 VAL 209 215 215 VAL VAL A . n A 1 210 GLU 210 216 216 GLU GLU A . n A 1 211 GLN 211 217 217 GLN GLN A . n A 1 212 LEU 212 218 218 LEU LEU A . n A 1 213 GLN 213 219 219 GLN GLN A . n A 1 214 LYS 214 220 220 LYS LYS A . n A 1 215 VAL 215 221 221 VAL VAL A . n A 1 216 HIS 216 222 222 HIS HIS A . n A 1 217 PHE 217 223 223 PHE PHE A . n A 1 218 ILE 218 224 224 ILE ILE A . n A 1 219 THR 219 225 225 THR THR A . n A 1 220 ASP 220 226 226 ASP ASP A . n A 1 221 THR 221 227 227 THR THR A . n A 1 222 LEU 222 228 228 LEU LEU A . n A 1 223 SER 223 229 229 SER SER A . n A 1 224 LYS 224 230 230 LYS LYS A . n A 1 225 GLY 225 231 231 GLY GLY A . n A 1 226 GLU 226 232 232 GLU GLU A . n A 1 227 THR 227 233 233 THR THR A . n A 1 228 LYS 228 234 234 LYS LYS A . n A 1 229 PHE 229 235 235 PHE PHE A . n A 1 230 MET 230 236 236 MET MET A . n A 1 231 GLY 231 237 237 GLY GLY A . n A 1 232 VAL 232 238 238 VAL VAL A . n A 1 233 CYS 233 239 239 CYS CYS A . n A 1 234 GLN 234 240 240 GLN GLN A . n A 1 235 LEU 235 241 241 LEU LEU A . n A 1 236 PRO 236 242 242 PRO PRO A . n A 1 237 SER 237 243 243 SER SER A . n A 1 238 LYS 238 244 244 LYS LYS A . n A 1 239 ASN 239 245 245 ASN ASN A . n A 1 240 ASP 240 246 246 ASP ASP A . n A 1 241 GLU 241 247 247 GLU GLU A . n A 1 242 LYS 242 248 248 LYS LYS A . n A 1 243 GLU 243 249 249 GLU GLU A . n A 1 244 TYR 244 250 250 TYR TYR A . n A 1 245 PRO 245 251 251 PRO PRO A . n A 1 246 HIS 246 252 252 HIS HIS A . n A 1 247 ARG 247 253 253 ARG ARG A . n A 1 248 ARG 248 254 254 ARG ARG A . n A 1 249 ILE 249 255 255 ILE ILE A . n A 1 250 ASP 250 256 256 ASP ASP A . n A 1 251 ILE 251 257 257 ILE ILE A . n A 1 252 ARG 252 258 258 ARG ARG A . n A 1 253 LEU 253 259 259 LEU LEU A . n A 1 254 ILE 254 260 260 ILE ILE A . n A 1 255 PRO 255 261 261 PRO PRO A . n A 1 256 LYS 256 262 262 LYS LYS A . n A 1 257 ASP 257 263 263 ASP ASP A . n A 1 258 GLN 258 264 264 GLN GLN A . n A 1 259 TYR 259 265 265 TYR TYR A . n A 1 260 TYR 260 266 266 TYR TYR A . n A 1 261 CYS 261 267 267 CYS CYS A . n A 1 262 GLY 262 268 268 GLY GLY A . n A 1 263 VAL 263 269 269 VAL VAL A . n A 1 264 LEU 264 270 270 LEU LEU A . n A 1 265 TYR 265 271 271 TYR TYR A . n A 1 266 PHE 266 272 272 PHE PHE A . n A 1 267 THR 267 273 273 THR THR A . n A 1 268 GLY 268 274 274 GLY GLY A . n A 1 269 SER 269 275 275 SER SER A . n A 1 270 ASP 270 276 276 ASP ASP A . n A 1 271 ILE 271 277 277 ILE ILE A . n A 1 272 PHE 272 278 278 PHE PHE A . n A 1 273 ASN 273 279 279 ASN ASN A . n A 1 274 LYS 274 280 280 LYS LYS A . n A 1 275 ASN 275 281 281 ASN ASN A . n A 1 276 MET 276 282 282 MET MET A . n A 1 277 ARG 277 283 283 ARG ARG A . n A 1 278 ALA 278 284 284 ALA ALA A . n A 1 279 HIS 279 285 285 HIS HIS A . n A 1 280 ALA 280 286 286 ALA ALA A . n A 1 281 LEU 281 287 287 LEU LEU A . n A 1 282 GLU 282 288 288 GLU GLU A . n A 1 283 LYS 283 289 289 LYS LYS A . n A 1 284 GLY 284 290 290 GLY GLY A . n A 1 285 PHE 285 291 291 PHE PHE A . n A 1 286 THR 286 292 292 THR THR A . n A 1 287 ILE 287 293 293 ILE ILE A . n A 1 288 ASN 288 294 294 ASN ASN A . n A 1 289 GLU 289 295 295 GLU GLU A . n A 1 290 TYR 290 296 296 TYR TYR A . n A 1 291 THR 291 297 297 THR THR A . n A 1 292 ILE 292 298 298 ILE ILE A . n A 1 293 ARG 293 299 299 ARG ARG A . n A 1 294 PRO 294 300 300 PRO PRO A . n A 1 295 LEU 295 301 301 LEU LEU A . n A 1 296 GLY 296 302 302 GLY GLY A . n A 1 297 VAL 297 303 303 VAL VAL A . n A 1 298 THR 298 304 304 THR THR A . n A 1 299 GLY 299 305 305 GLY GLY A . n A 1 300 VAL 300 306 306 VAL VAL A . n A 1 301 ALA 301 307 307 ALA ALA A . n A 1 302 GLY 302 308 308 GLY GLY A . n A 1 303 GLU 303 309 309 GLU GLU A . n A 1 304 PRO 304 310 310 PRO PRO A . n A 1 305 LEU 305 311 311 LEU LEU A . n A 1 306 PRO 306 312 312 PRO PRO A . n A 1 307 VAL 307 313 313 VAL VAL A . n A 1 308 ASP 308 314 314 ASP ASP A . n A 1 309 SER 309 315 315 SER SER A . n A 1 310 GLU 310 316 316 GLU GLU A . n A 1 311 LYS 311 317 317 LYS LYS A . n A 1 312 ASP 312 318 318 ASP ASP A . n A 1 313 ILE 313 319 319 ILE ILE A . n A 1 314 PHE 314 320 320 PHE PHE A . n A 1 315 ASP 315 321 321 ASP ASP A . n A 1 316 TYR 316 322 322 TYR TYR A . n A 1 317 ILE 317 323 323 ILE ILE A . n A 1 318 GLN 318 324 324 GLN GLN A . n A 1 319 TRP 319 325 325 TRP TRP A . n A 1 320 LYS 320 326 326 LYS LYS A . n A 1 321 TYR 321 327 327 TYR TYR A . n A 1 322 ARG 322 328 328 ARG ARG A . n A 1 323 GLU 323 329 329 GLU GLU A . n A 1 324 PRO 324 330 330 PRO PRO A . n A 1 325 LYS 325 331 331 LYS LYS A . n A 1 326 ASP 326 332 332 ASP ASP A . n A 1 327 ARG 327 333 333 ARG ARG A . n A 1 328 SER 328 334 334 SER SER A . n A 1 329 GLU 329 335 335 GLU GLU A . n B 2 1 DC 1 1 1 DC DC T . n B 2 2 DC 2 2 2 DC DC T . n B 2 3 DG 3 3 3 DG DG T . n B 2 4 DA 4 4 4 DA DA T . n B 2 5 DC 5 5 5 DC DC T . n B 2 6 BGM 6 6 6 BGM BGM T . n B 2 7 DT 7 7 7 DT DT T . n B 2 8 DC 8 8 8 DC DC T . n B 2 9 DG 9 9 9 DG DG T . n B 2 10 DC 10 10 10 DC DC T . n B 2 11 DA 11 11 11 DA DA T . n B 2 12 DT 12 12 12 DT DT T . n B 2 13 DC 13 13 13 DC DC T . n B 2 14 DA 14 14 14 DA DA T . n B 2 15 DG 15 15 15 DG DG T . n B 2 16 DC 16 16 16 DC DC T . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DA 10 10 10 DA DA P . n C 3 11 DC 11 11 11 DC DC P . n D 4 1 DG 1 1 1 DG DG D . n D 4 2 DT 2 2 2 DT DT D . n D 4 3 DC 3 3 3 DC DC D . n D 4 4 DG 4 4 4 DG DG D . n D 4 5 DG 5 5 5 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 401 401 MG MG A . F 6 NA 1 402 402 NA NA A . G 6 NA 1 403 403 NA NA A . H 7 PO4 1 404 404 PO4 PO4 A . I 5 MG 1 405 405 MG MG A . J 8 HOH 1 501 1 HOH HOH A . J 8 HOH 2 502 2 HOH HOH A . J 8 HOH 3 503 3 HOH HOH A . J 8 HOH 4 504 4 HOH HOH A . J 8 HOH 5 505 5 HOH HOH A . J 8 HOH 6 506 7 HOH HOH A . J 8 HOH 7 507 8 HOH HOH A . J 8 HOH 8 508 11 HOH HOH A . J 8 HOH 9 509 12 HOH HOH A . J 8 HOH 10 510 13 HOH HOH A . J 8 HOH 11 511 16 HOH HOH A . J 8 HOH 12 512 17 HOH HOH A . J 8 HOH 13 513 18 HOH HOH A . J 8 HOH 14 514 19 HOH HOH A . J 8 HOH 15 515 20 HOH HOH A . J 8 HOH 16 516 21 HOH HOH A . J 8 HOH 17 517 23 HOH HOH A . J 8 HOH 18 518 24 HOH HOH A . J 8 HOH 19 519 25 HOH HOH A . J 8 HOH 20 520 26 HOH HOH A . J 8 HOH 21 521 27 HOH HOH A . J 8 HOH 22 522 28 HOH HOH A . J 8 HOH 23 523 30 HOH HOH A . J 8 HOH 24 524 31 HOH HOH A . J 8 HOH 25 525 32 HOH HOH A . J 8 HOH 26 526 34 HOH HOH A . J 8 HOH 27 527 35 HOH HOH A . J 8 HOH 28 528 36 HOH HOH A . J 8 HOH 29 529 37 HOH HOH A . J 8 HOH 30 530 38 HOH HOH A . J 8 HOH 31 531 39 HOH HOH A . J 8 HOH 32 532 40 HOH HOH A . J 8 HOH 33 533 41 HOH HOH A . J 8 HOH 34 534 43 HOH HOH A . J 8 HOH 35 535 45 HOH HOH A . J 8 HOH 36 536 47 HOH HOH A . J 8 HOH 37 537 51 HOH HOH A . J 8 HOH 38 538 53 HOH HOH A . J 8 HOH 39 539 54 HOH HOH A . J 8 HOH 40 540 55 HOH HOH A . J 8 HOH 41 541 56 HOH HOH A . J 8 HOH 42 542 57 HOH HOH A . J 8 HOH 43 543 58 HOH HOH A . J 8 HOH 44 544 59 HOH HOH A . J 8 HOH 45 545 60 HOH HOH A . J 8 HOH 46 546 61 HOH HOH A . J 8 HOH 47 547 62 HOH HOH A . J 8 HOH 48 548 66 HOH HOH A . J 8 HOH 49 549 67 HOH HOH A . K 8 HOH 1 101 6 HOH HOH T . K 8 HOH 2 102 9 HOH HOH T . K 8 HOH 3 103 14 HOH HOH T . K 8 HOH 4 104 22 HOH HOH T . K 8 HOH 5 105 42 HOH HOH T . K 8 HOH 6 106 49 HOH HOH T . L 8 HOH 1 101 33 HOH HOH P . L 8 HOH 2 102 44 HOH HOH P . M 8 HOH 1 101 48 HOH HOH D . M 8 HOH 2 102 52 HOH HOH D . M 8 HOH 3 103 63 HOH HOH D . M 8 HOH 4 104 65 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 8 ? CG ? A GLN 2 CG 2 1 Y 1 A GLN 8 ? CD ? A GLN 2 CD 3 1 Y 1 A GLN 8 ? OE1 ? A GLN 2 OE1 4 1 Y 1 A GLN 8 ? NE2 ? A GLN 2 NE2 5 1 Y 1 A GLU 9 ? CG ? A GLU 3 CG 6 1 Y 1 A GLU 9 ? CD ? A GLU 3 CD 7 1 Y 1 A GLU 9 ? OE1 ? A GLU 3 OE1 8 1 Y 1 A GLU 9 ? OE2 ? A GLU 3 OE2 9 1 Y 1 A GLU 203 ? CG ? A GLU 197 CG 10 1 Y 1 A GLU 203 ? CD ? A GLU 197 CD 11 1 Y 1 A GLU 203 ? OE1 ? A GLU 197 OE1 12 1 Y 1 A GLU 203 ? OE2 ? A GLU 197 OE2 13 1 Y 1 A LYS 244 ? CG ? A LYS 238 CG 14 1 Y 1 A LYS 244 ? CD ? A LYS 238 CD 15 1 Y 1 A LYS 244 ? CE ? A LYS 238 CE 16 1 Y 1 A LYS 244 ? NZ ? A LYS 238 NZ 17 1 Y 1 A ASN 245 ? CG ? A ASN 239 CG 18 1 Y 1 A ASN 245 ? OD1 ? A ASN 239 OD1 19 1 Y 1 A ASN 245 ? ND2 ? A ASN 239 ND2 20 1 Y 1 A ASP 246 ? CG ? A ASP 240 CG 21 1 Y 1 A ASP 246 ? OD1 ? A ASP 240 OD1 22 1 Y 1 A ASP 246 ? OD2 ? A ASP 240 OD2 23 1 Y 1 A GLU 247 ? CG ? A GLU 241 CG 24 1 Y 1 A GLU 247 ? CD ? A GLU 241 CD 25 1 Y 1 A GLU 247 ? OE1 ? A GLU 241 OE1 26 1 Y 1 A GLU 247 ? OE2 ? A GLU 241 OE2 27 1 Y 1 A LYS 280 ? CG ? A LYS 274 CG 28 1 Y 1 A LYS 280 ? CD ? A LYS 274 CD 29 1 Y 1 A LYS 280 ? CE ? A LYS 274 CE 30 1 Y 1 A LYS 280 ? NZ ? A LYS 274 NZ 31 1 Y 1 A GLU 288 ? CG ? A GLU 282 CG 32 1 Y 1 A GLU 288 ? CD ? A GLU 282 CD 33 1 Y 1 A GLU 288 ? OE1 ? A GLU 282 OE1 34 1 Y 1 A GLU 288 ? OE2 ? A GLU 282 OE2 35 1 Y 1 A LYS 289 ? CG ? A LYS 283 CG 36 1 Y 1 A LYS 289 ? CD ? A LYS 283 CD 37 1 Y 1 A LYS 289 ? CE ? A LYS 283 CE 38 1 Y 1 A LYS 289 ? NZ ? A LYS 283 NZ 39 1 Y 1 A VAL 303 ? CG1 ? A VAL 297 CG1 40 1 Y 1 A VAL 303 ? CG2 ? A VAL 297 CG2 41 1 Y 1 A LYS 326 ? CG ? A LYS 320 CG 42 1 Y 1 A LYS 326 ? CD ? A LYS 320 CD 43 1 Y 1 A LYS 326 ? CE ? A LYS 320 CE 44 1 Y 1 A LYS 326 ? NZ ? A LYS 320 NZ 45 1 Y 1 A GLU 335 ? CG ? A GLU 329 CG 46 1 Y 1 A GLU 335 ? CD ? A GLU 329 CD 47 1 Y 1 A GLU 335 ? OE1 ? A GLU 329 OE1 48 1 Y 1 A GLU 335 ? OE2 ? A GLU 329 OE2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.6.0117 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 StructureStudio . ? ? ? ? 'data collection' ? ? ? 4 DENZO . ? ? ? ? 'data reduction' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 MOLREP . ? ? ? ? phasing ? ? ? # _cell.length_a 54.955 _cell.length_b 79.075 _cell.length_c 54.912 _cell.angle_alpha 90.000 _cell.angle_beta 106.590 _cell.angle_gamma 90.000 _cell.entry_id 4NLN _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 4NLN _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 4 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4NLN _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.41 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '14-23% PEG3400, 350 mM sodium acetate, 50 mM imidazole, pH 7.5, VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-07-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(220)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97648 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.3' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97648 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.3 # _reflns.entry_id 4NLN _reflns.observed_criterion_sigma_F 1 _reflns.observed_criterion_sigma_I 1 _reflns.d_resolution_high 2.261 _reflns.d_resolution_low 52.667 _reflns.number_all 21169 _reflns.number_obs 20822 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.261 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4NLN _refine.ls_d_res_high 2.261 _refine.ls_d_res_low 52.667 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 94.31 _refine.ls_number_reflns_obs 19968 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2137 _refine.ls_R_factor_R_work 0.2104 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2732 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1022 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 38.0607 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.6100 _refine.aniso_B[2][2] -0.4300 _refine.aniso_B[3][3] 0.8600 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 1.8100 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9450 _refine.correlation_coeff_Fo_to_Fc_free 0.9060 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.3740 _refine.pdbx_overall_ESU_R_Free 0.2680 _refine.overall_SU_ML 0.2070 _refine.overall_SU_B 8.5980 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 103.010 _refine.B_iso_min 16.620 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2565 _refine_hist.pdbx_number_atoms_nucleic_acid 652 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 61 _refine_hist.number_atoms_total 3287 _refine_hist.d_res_high 2.261 _refine_hist.d_res_low 52.667 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 3354 0.013 0.018 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 4657 1.842 1.837 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 325 6.140 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 118 37.113 23.898 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 478 16.760 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 18 17.671 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 486 0.108 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2293 0.008 0.021 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.261 _refine_ls_shell.d_res_low 2.319 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 85.0 _refine_ls_shell.number_reflns_R_work 1223 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2840 _refine_ls_shell.R_factor_R_free 0.3690 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1298 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4NLN _struct.title 'Structure of human DNA polymerase beta complexed with nicked DNA containing a template 8BrG and incoming CTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NLN _struct_keywords.pdbx_keywords 'TRANSFERASE, LYASE/DNA' _struct_keywords.text 'DNA binding, helix-turn-helix motif, polymerase fold, nucleotidyl transferase, nucleus, TRANSFERASE, LYASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 5 ? J N N 8 ? K N N 8 ? L N N 8 ? M N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLB_HUMAN P06746 1 ;PQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLE KIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEV KKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKND EKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWK YREPKDRSE ; 7 ? 2 PDB 4NLN 4NLN 2 'CCGAC(BGM)TCGCATCAGC' 1 ? 3 PDB 4NLN 4NLN 3 GCTGATGCGAC 1 ? 4 PDB 4NLN 4NLN 4 GTCGG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4NLN A 1 ? 329 ? P06746 7 ? 335 ? 7 335 2 2 4NLN T 1 ? 16 ? 4NLN 1 ? 16 ? 1 16 3 3 4NLN P 1 ? 11 ? 4NLN 1 ? 11 ? 1 11 4 4 4NLN D 1 ? 5 ? 4NLN 1 ? 5 ? 1 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5440 ? 1 MORE -67 ? 1 'SSA (A^2)' 20730 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 6 ? VAL A 23 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA A 26 ? TYR A 43 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 3 SER A 49 ? LYS A 55 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY A 60 ? GLY A 74 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 5 LEU A 76 ? GLN A 84 ? LEU A 82 GLN A 90 1 ? 9 HELX_P HELX_P6 6 ASP A 85 ? THR A 95 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 7 GLY A 101 ? GLU A 111 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR A 115 ? LYS A 121 ? THR A 121 LYS A 127 1 ? 7 HELX_P HELX_P9 9 ASN A 122 ? LEU A 126 ? ASN A 128 LEU A 132 5 ? 5 HELX_P HELX_P10 10 ASN A 127 ? TYR A 136 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR A 136 ? LYS A 142 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 12 ARG A 146 ? ASP A 164 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 13 CYS A 172 ? ARG A 177 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 14 LYS A 203 ? VAL A 215 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 15 PRO A 255 ? ASP A 257 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN A 258 ? GLY A 268 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER A 269 ? LYS A 283 ? SER A 275 LYS A 289 1 ? 15 HELX_P HELX_P18 18 SER A 309 ? ILE A 317 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 19 GLU A 323 ? ARG A 327 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 5 "O3'" ? ? ? 1_555 B BGM 6 P ? ? T DC 5 T BGM 6 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale2 covale both ? B BGM 6 "O3'" ? ? ? 1_555 B DT 7 P ? ? T BGM 6 T DT 7 1_555 ? ? ? ? ? ? ? 1.580 ? ? metalc1 metalc ? ? A LYS 54 O ? ? ? 1_555 G NA . NA ? ? A LYS 60 A NA 403 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc2 metalc ? ? A LEU 56 O ? ? ? 1_555 G NA . NA ? ? A LEU 62 A NA 403 1_555 ? ? ? ? ? ? ? 2.495 ? ? metalc3 metalc ? ? A VAL 59 O ? ? ? 1_555 G NA . NA ? ? A VAL 65 A NA 403 1_555 ? ? ? ? ? ? ? 2.507 ? ? metalc4 metalc ? ? A THR 95 O ? ? ? 1_555 F NA . NA ? ? A THR 101 A NA 402 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc5 metalc ? ? A VAL 97 O ? ? ? 1_555 F NA . NA ? ? A VAL 103 A NA 402 1_555 ? ? ? ? ? ? ? 2.619 ? ? metalc6 metalc ? ? A ILE 100 O ? ? ? 1_555 F NA . NA ? ? A ILE 106 A NA 402 1_555 ? ? ? ? ? ? ? 2.414 ? ? metalc7 metalc ? ? A SER 165 OG ? ? ? 1_555 E MG . MG ? ? A SER 171 A MG 401 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 401 A HOH 511 1_555 ? ? ? ? ? ? ? 2.788 ? ? metalc9 metalc ? ? F NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 402 P DG 9 1_555 ? ? ? ? ? ? ? 2.381 ? ? metalc10 metalc ? ? G NA . NA ? ? ? 1_555 D DC 3 OP1 ? ? A NA 403 D DC 3 1_555 ? ? ? ? ? ? ? 2.935 ? ? metalc11 metalc ? ? I MG . MG ? ? ? 1_555 C DC 11 OP1 ? ? A MG 405 P DC 11 1_555 ? ? ? ? ? ? ? 2.400 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 D DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 D DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 D DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 D DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 D DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 D DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 D DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 D DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 D DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N1 ? ? ? 1_555 D DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DA 4 N6 ? ? ? 1_555 D DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N3 ? ? ? 1_555 D DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 N4 ? ? ? 1_555 D DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 5 O2 ? ? ? 1_555 D DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 10 N1 ? ? T DT 7 P DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 10 N6 ? ? T DT 7 P DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DA 11 N1 ? ? ? 1_555 C DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DA 11 N6 ? ? ? 1_555 C DT 6 O4 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DA 14 N1 ? ? ? 1_555 C DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DA 14 N6 ? ? ? 1_555 C DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DG 15 N1 ? ? ? 1_555 C DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DG 15 N2 ? ? ? 1_555 C DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DG 15 O6 ? ? ? 1_555 C DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 54 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A LEU 56 ? A LEU 62 ? 1_555 97.4 ? 2 O ? A LYS 54 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A VAL 59 ? A VAL 65 ? 1_555 82.3 ? 3 O ? A LEU 56 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A VAL 59 ? A VAL 65 ? 1_555 96.2 ? 4 O ? A LYS 54 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 166.7 ? 5 O ? A LEU 56 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 84.9 ? 6 O ? A VAL 59 ? A VAL 65 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 84.4 ? 7 O ? A THR 95 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? A VAL 97 ? A VAL 103 ? 1_555 98.3 ? 8 O ? A THR 95 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? A ILE 100 ? A ILE 106 ? 1_555 94.3 ? 9 O ? A VAL 97 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? A ILE 100 ? A ILE 106 ? 1_555 80.4 ? 10 O ? A THR 95 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 167.4 ? 11 O ? A VAL 97 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 91.3 ? 12 O ? A ILE 100 ? A ILE 106 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 95.3 ? 13 OG ? A SER 165 ? A SER 171 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O ? J HOH . ? A HOH 511 ? 1_555 68.6 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 268 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 269 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.39 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 144 ? PRO A 145 ? ILE A 150 PRO A 151 A 2 SER A 181 ? SER A 182 ? SER A 187 SER A 188 B 1 ILE A 168 ? VAL A 171 ? ILE A 174 VAL A 177 B 2 MET A 185 ? THR A 190 ? MET A 191 THR A 196 B 3 ARG A 247 ? LEU A 253 ? ARG A 253 LEU A 259 B 4 LYS A 228 ? CYS A 233 ? LYS A 234 CYS A 239 B 5 ILE A 218 ? LYS A 224 ? ILE A 224 LYS A 230 C 1 PHE A 285 ? ILE A 287 ? PHE A 291 ILE A 293 C 2 ILE A 292 ? PRO A 294 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 144 ? N ILE A 150 O SER A 182 ? O SER A 188 B 1 2 N THR A 170 ? N THR A 176 O LEU A 188 ? O LEU A 194 B 2 3 N VAL A 187 ? N VAL A 193 O ASP A 250 ? O ASP A 256 B 3 4 O ILE A 249 ? O ILE A 255 N GLY A 231 ? N GLY A 237 B 4 5 O MET A 230 ? O MET A 236 N SER A 223 ? N SER A 229 C 1 2 N THR A 286 ? N THR A 292 O ARG A 293 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 401 ? 3 'BINDING SITE FOR RESIDUE MG A 401' AC2 Software A NA 402 ? 4 'BINDING SITE FOR RESIDUE NA A 402' AC3 Software A NA 403 ? 4 'BINDING SITE FOR RESIDUE NA A 403' AC4 Software A PO4 404 ? 4 'BINDING SITE FOR RESIDUE PO4 A 404' AC5 Software A MG 405 ? 3 'BINDING SITE FOR RESIDUE MG A 405' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 SER A 24 ? SER A 30 . ? 1_554 ? 2 AC1 3 SER A 165 ? SER A 171 . ? 1_555 ? 3 AC1 3 HOH J . ? HOH A 511 . ? 1_555 ? 4 AC2 4 THR A 95 ? THR A 101 . ? 1_555 ? 5 AC2 4 VAL A 97 ? VAL A 103 . ? 1_555 ? 6 AC2 4 ILE A 100 ? ILE A 106 . ? 1_555 ? 7 AC2 4 DG C 9 ? DG P 9 . ? 1_555 ? 8 AC3 4 LYS A 54 ? LYS A 60 . ? 1_555 ? 9 AC3 4 LEU A 56 ? LEU A 62 . ? 1_555 ? 10 AC3 4 VAL A 59 ? VAL A 65 . ? 1_555 ? 11 AC3 4 DC D 3 ? DC D 3 . ? 1_555 ? 12 AC4 4 SER A 174 ? SER A 180 . ? 1_555 ? 13 AC4 4 SER A 182 ? SER A 188 . ? 1_555 ? 14 AC4 4 GLY A 183 ? GLY A 189 . ? 1_555 ? 15 AC4 4 ASP A 184 ? ASP A 190 . ? 1_555 ? 16 AC5 3 ASP A 184 ? ASP A 190 . ? 1_555 ? 17 AC5 3 ASP A 186 ? ASP A 192 . ? 1_555 ? 18 AC5 3 DC C 11 ? DC P 11 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" P DG 7 ? ? P P DC 8 ? ? 1.532 1.607 -0.075 0.012 Y 2 1 P D DG 1 ? ? OP3 D DG 1 ? ? 1.499 1.607 -0.108 0.012 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 195 ? ? CB A LEU 195 ? ? CG A LEU 195 ? ? 130.67 115.30 15.37 2.30 N 2 1 "O3'" T DC 8 ? ? P T DG 9 ? ? OP2 T DG 9 ? ? 117.25 110.50 6.75 1.10 Y 3 1 "C3'" T DG 9 ? ? "O3'" T DG 9 ? ? P T DC 10 ? ? 127.43 119.70 7.73 1.20 Y 4 1 "C3'" T DC 10 ? ? "O3'" T DC 10 ? ? P T DA 11 ? ? 128.24 119.70 8.54 1.20 Y 5 1 "C3'" P DG 4 ? ? "O3'" P DG 4 ? ? P P DA 5 ? ? 127.23 119.70 7.53 1.20 Y 6 1 "O5'" P DA 5 ? ? P P DA 5 ? ? OP1 P DA 5 ? ? 100.14 105.70 -5.56 0.90 N 7 1 "O5'" P DT 6 ? ? P P DT 6 ? ? OP1 P DT 6 ? ? 100.09 105.70 -5.60 0.90 N 8 1 "C3'" P DA 10 ? ? "O3'" P DA 10 ? ? P P DC 11 ? ? 127.66 119.70 7.96 1.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 50 ? ? -96.99 41.56 2 1 ASP A 170 ? ? -166.75 112.95 3 1 SER A 171 ? ? -59.52 -4.10 4 1 CYS A 178 ? ? -105.93 -148.67 5 1 ASP A 263 ? ? -69.35 2.72 6 1 ASN A 294 ? ? -111.42 -165.07 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LYS _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 244 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASN _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 245 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -142.00 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id BGM _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id T _pdbx_struct_mod_residue.auth_comp_id BGM _pdbx_struct_mod_residue.auth_seq_id 6 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 205 ? A THR 199 2 1 Y 1 A LYS 206 ? A LYS 200 3 1 Y 1 A GLN 207 ? A GLN 201 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BGM P P N N 74 BGM OP1 O N N 75 BGM OP2 O N N 76 BGM "O5'" O N N 77 BGM "C5'" C N N 78 BGM "C4'" C N R 79 BGM "O4'" O N N 80 BGM "C1'" C N R 81 BGM N9 N Y N 82 BGM C8 C Y N 83 BGM N7 N Y N 84 BGM C5 C Y N 85 BGM C4 C Y N 86 BGM N3 N N N 87 BGM C2 C N N 88 BGM N2 N N N 89 BGM N1 N N N 90 BGM C6 C N N 91 BGM O6 O N N 92 BGM "C2'" C N N 93 BGM "C3'" C N S 94 BGM "O3'" O N N 95 BGM OP3 O N N 96 BGM BR BR N N 97 BGM HOP2 H N N 98 BGM "H5'" H N N 99 BGM "H5''" H N N 100 BGM "H4'" H N N 101 BGM "H1'" H N N 102 BGM H21 H N N 103 BGM H22 H N N 104 BGM H1 H N N 105 BGM "H2'" H N N 106 BGM "H2''" H N N 107 BGM "H3'" H N N 108 BGM "HO3'" H N N 109 BGM HOP3 H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 DA OP3 O N N 125 DA P P N N 126 DA OP1 O N N 127 DA OP2 O N N 128 DA "O5'" O N N 129 DA "C5'" C N N 130 DA "C4'" C N R 131 DA "O4'" O N N 132 DA "C3'" C N S 133 DA "O3'" O N N 134 DA "C2'" C N N 135 DA "C1'" C N R 136 DA N9 N Y N 137 DA C8 C Y N 138 DA N7 N Y N 139 DA C5 C Y N 140 DA C6 C Y N 141 DA N6 N N N 142 DA N1 N Y N 143 DA C2 C Y N 144 DA N3 N Y N 145 DA C4 C Y N 146 DA HOP3 H N N 147 DA HOP2 H N N 148 DA "H5'" H N N 149 DA "H5''" H N N 150 DA "H4'" H N N 151 DA "H3'" H N N 152 DA "HO3'" H N N 153 DA "H2'" H N N 154 DA "H2''" H N N 155 DA "H1'" H N N 156 DA H8 H N N 157 DA H61 H N N 158 DA H62 H N N 159 DA H2 H N N 160 DC OP3 O N N 161 DC P P N N 162 DC OP1 O N N 163 DC OP2 O N N 164 DC "O5'" O N N 165 DC "C5'" C N N 166 DC "C4'" C N R 167 DC "O4'" O N N 168 DC "C3'" C N S 169 DC "O3'" O N N 170 DC "C2'" C N N 171 DC "C1'" C N R 172 DC N1 N N N 173 DC C2 C N N 174 DC O2 O N N 175 DC N3 N N N 176 DC C4 C N N 177 DC N4 N N N 178 DC C5 C N N 179 DC C6 C N N 180 DC HOP3 H N N 181 DC HOP2 H N N 182 DC "H5'" H N N 183 DC "H5''" H N N 184 DC "H4'" H N N 185 DC "H3'" H N N 186 DC "HO3'" H N N 187 DC "H2'" H N N 188 DC "H2''" H N N 189 DC "H1'" H N N 190 DC H41 H N N 191 DC H42 H N N 192 DC H5 H N N 193 DC H6 H N N 194 DG OP3 O N N 195 DG P P N N 196 DG OP1 O N N 197 DG OP2 O N N 198 DG "O5'" O N N 199 DG "C5'" C N N 200 DG "C4'" C N R 201 DG "O4'" O N N 202 DG "C3'" C N S 203 DG "O3'" O N N 204 DG "C2'" C N N 205 DG "C1'" C N R 206 DG N9 N Y N 207 DG C8 C Y N 208 DG N7 N Y N 209 DG C5 C Y N 210 DG C6 C N N 211 DG O6 O N N 212 DG N1 N N N 213 DG C2 C N N 214 DG N2 N N N 215 DG N3 N N N 216 DG C4 C Y N 217 DG HOP3 H N N 218 DG HOP2 H N N 219 DG "H5'" H N N 220 DG "H5''" H N N 221 DG "H4'" H N N 222 DG "H3'" H N N 223 DG "HO3'" H N N 224 DG "H2'" H N N 225 DG "H2''" H N N 226 DG "H1'" H N N 227 DG H8 H N N 228 DG H1 H N N 229 DG H21 H N N 230 DG H22 H N N 231 DT OP3 O N N 232 DT P P N N 233 DT OP1 O N N 234 DT OP2 O N N 235 DT "O5'" O N N 236 DT "C5'" C N N 237 DT "C4'" C N R 238 DT "O4'" O N N 239 DT "C3'" C N S 240 DT "O3'" O N N 241 DT "C2'" C N N 242 DT "C1'" C N R 243 DT N1 N N N 244 DT C2 C N N 245 DT O2 O N N 246 DT N3 N N N 247 DT C4 C N N 248 DT O4 O N N 249 DT C5 C N N 250 DT C7 C N N 251 DT C6 C N N 252 DT HOP3 H N N 253 DT HOP2 H N N 254 DT "H5'" H N N 255 DT "H5''" H N N 256 DT "H4'" H N N 257 DT "H3'" H N N 258 DT "HO3'" H N N 259 DT "H2'" H N N 260 DT "H2''" H N N 261 DT "H1'" H N N 262 DT H3 H N N 263 DT H71 H N N 264 DT H72 H N N 265 DT H73 H N N 266 DT H6 H N N 267 GLN N N N N 268 GLN CA C N S 269 GLN C C N N 270 GLN O O N N 271 GLN CB C N N 272 GLN CG C N N 273 GLN CD C N N 274 GLN OE1 O N N 275 GLN NE2 N N N 276 GLN OXT O N N 277 GLN H H N N 278 GLN H2 H N N 279 GLN HA H N N 280 GLN HB2 H N N 281 GLN HB3 H N N 282 GLN HG2 H N N 283 GLN HG3 H N N 284 GLN HE21 H N N 285 GLN HE22 H N N 286 GLN HXT H N N 287 GLU N N N N 288 GLU CA C N S 289 GLU C C N N 290 GLU O O N N 291 GLU CB C N N 292 GLU CG C N N 293 GLU CD C N N 294 GLU OE1 O N N 295 GLU OE2 O N N 296 GLU OXT O N N 297 GLU H H N N 298 GLU H2 H N N 299 GLU HA H N N 300 GLU HB2 H N N 301 GLU HB3 H N N 302 GLU HG2 H N N 303 GLU HG3 H N N 304 GLU HE2 H N N 305 GLU HXT H N N 306 GLY N N N N 307 GLY CA C N N 308 GLY C C N N 309 GLY O O N N 310 GLY OXT O N N 311 GLY H H N N 312 GLY H2 H N N 313 GLY HA2 H N N 314 GLY HA3 H N N 315 GLY HXT H N N 316 HIS N N N N 317 HIS CA C N S 318 HIS C C N N 319 HIS O O N N 320 HIS CB C N N 321 HIS CG C Y N 322 HIS ND1 N Y N 323 HIS CD2 C Y N 324 HIS CE1 C Y N 325 HIS NE2 N Y N 326 HIS OXT O N N 327 HIS H H N N 328 HIS H2 H N N 329 HIS HA H N N 330 HIS HB2 H N N 331 HIS HB3 H N N 332 HIS HD1 H N N 333 HIS HD2 H N N 334 HIS HE1 H N N 335 HIS HE2 H N N 336 HIS HXT H N N 337 HOH O O N N 338 HOH H1 H N N 339 HOH H2 H N N 340 ILE N N N N 341 ILE CA C N S 342 ILE C C N N 343 ILE O O N N 344 ILE CB C N S 345 ILE CG1 C N N 346 ILE CG2 C N N 347 ILE CD1 C N N 348 ILE OXT O N N 349 ILE H H N N 350 ILE H2 H N N 351 ILE HA H N N 352 ILE HB H N N 353 ILE HG12 H N N 354 ILE HG13 H N N 355 ILE HG21 H N N 356 ILE HG22 H N N 357 ILE HG23 H N N 358 ILE HD11 H N N 359 ILE HD12 H N N 360 ILE HD13 H N N 361 ILE HXT H N N 362 LEU N N N N 363 LEU CA C N S 364 LEU C C N N 365 LEU O O N N 366 LEU CB C N N 367 LEU CG C N N 368 LEU CD1 C N N 369 LEU CD2 C N N 370 LEU OXT O N N 371 LEU H H N N 372 LEU H2 H N N 373 LEU HA H N N 374 LEU HB2 H N N 375 LEU HB3 H N N 376 LEU HG H N N 377 LEU HD11 H N N 378 LEU HD12 H N N 379 LEU HD13 H N N 380 LEU HD21 H N N 381 LEU HD22 H N N 382 LEU HD23 H N N 383 LEU HXT H N N 384 LYS N N N N 385 LYS CA C N S 386 LYS C C N N 387 LYS O O N N 388 LYS CB C N N 389 LYS CG C N N 390 LYS CD C N N 391 LYS CE C N N 392 LYS NZ N N N 393 LYS OXT O N N 394 LYS H H N N 395 LYS H2 H N N 396 LYS HA H N N 397 LYS HB2 H N N 398 LYS HB3 H N N 399 LYS HG2 H N N 400 LYS HG3 H N N 401 LYS HD2 H N N 402 LYS HD3 H N N 403 LYS HE2 H N N 404 LYS HE3 H N N 405 LYS HZ1 H N N 406 LYS HZ2 H N N 407 LYS HZ3 H N N 408 LYS HXT H N N 409 MET N N N N 410 MET CA C N S 411 MET C C N N 412 MET O O N N 413 MET CB C N N 414 MET CG C N N 415 MET SD S N N 416 MET CE C N N 417 MET OXT O N N 418 MET H H N N 419 MET H2 H N N 420 MET HA H N N 421 MET HB2 H N N 422 MET HB3 H N N 423 MET HG2 H N N 424 MET HG3 H N N 425 MET HE1 H N N 426 MET HE2 H N N 427 MET HE3 H N N 428 MET HXT H N N 429 MG MG MG N N 430 NA NA NA N N 431 PHE N N N N 432 PHE CA C N S 433 PHE C C N N 434 PHE O O N N 435 PHE CB C N N 436 PHE CG C Y N 437 PHE CD1 C Y N 438 PHE CD2 C Y N 439 PHE CE1 C Y N 440 PHE CE2 C Y N 441 PHE CZ C Y N 442 PHE OXT O N N 443 PHE H H N N 444 PHE H2 H N N 445 PHE HA H N N 446 PHE HB2 H N N 447 PHE HB3 H N N 448 PHE HD1 H N N 449 PHE HD2 H N N 450 PHE HE1 H N N 451 PHE HE2 H N N 452 PHE HZ H N N 453 PHE HXT H N N 454 PO4 P P N N 455 PO4 O1 O N N 456 PO4 O2 O N N 457 PO4 O3 O N N 458 PO4 O4 O N N 459 PRO N N N N 460 PRO CA C N S 461 PRO C C N N 462 PRO O O N N 463 PRO CB C N N 464 PRO CG C N N 465 PRO CD C N N 466 PRO OXT O N N 467 PRO H H N N 468 PRO HA H N N 469 PRO HB2 H N N 470 PRO HB3 H N N 471 PRO HG2 H N N 472 PRO HG3 H N N 473 PRO HD2 H N N 474 PRO HD3 H N N 475 PRO HXT H N N 476 SER N N N N 477 SER CA C N S 478 SER C C N N 479 SER O O N N 480 SER CB C N N 481 SER OG O N N 482 SER OXT O N N 483 SER H H N N 484 SER H2 H N N 485 SER HA H N N 486 SER HB2 H N N 487 SER HB3 H N N 488 SER HG H N N 489 SER HXT H N N 490 THR N N N N 491 THR CA C N S 492 THR C C N N 493 THR O O N N 494 THR CB C N R 495 THR OG1 O N N 496 THR CG2 C N N 497 THR OXT O N N 498 THR H H N N 499 THR H2 H N N 500 THR HA H N N 501 THR HB H N N 502 THR HG1 H N N 503 THR HG21 H N N 504 THR HG22 H N N 505 THR HG23 H N N 506 THR HXT H N N 507 TRP N N N N 508 TRP CA C N S 509 TRP C C N N 510 TRP O O N N 511 TRP CB C N N 512 TRP CG C Y N 513 TRP CD1 C Y N 514 TRP CD2 C Y N 515 TRP NE1 N Y N 516 TRP CE2 C Y N 517 TRP CE3 C Y N 518 TRP CZ2 C Y N 519 TRP CZ3 C Y N 520 TRP CH2 C Y N 521 TRP OXT O N N 522 TRP H H N N 523 TRP H2 H N N 524 TRP HA H N N 525 TRP HB2 H N N 526 TRP HB3 H N N 527 TRP HD1 H N N 528 TRP HE1 H N N 529 TRP HE3 H N N 530 TRP HZ2 H N N 531 TRP HZ3 H N N 532 TRP HH2 H N N 533 TRP HXT H N N 534 TYR N N N N 535 TYR CA C N S 536 TYR C C N N 537 TYR O O N N 538 TYR CB C N N 539 TYR CG C Y N 540 TYR CD1 C Y N 541 TYR CD2 C Y N 542 TYR CE1 C Y N 543 TYR CE2 C Y N 544 TYR CZ C Y N 545 TYR OH O N N 546 TYR OXT O N N 547 TYR H H N N 548 TYR H2 H N N 549 TYR HA H N N 550 TYR HB2 H N N 551 TYR HB3 H N N 552 TYR HD1 H N N 553 TYR HD2 H N N 554 TYR HE1 H N N 555 TYR HE2 H N N 556 TYR HH H N N 557 TYR HXT H N N 558 VAL N N N N 559 VAL CA C N S 560 VAL C C N N 561 VAL O O N N 562 VAL CB C N N 563 VAL CG1 C N N 564 VAL CG2 C N N 565 VAL OXT O N N 566 VAL H H N N 567 VAL H2 H N N 568 VAL HA H N N 569 VAL HB H N N 570 VAL HG11 H N N 571 VAL HG12 H N N 572 VAL HG13 H N N 573 VAL HG21 H N N 574 VAL HG22 H N N 575 VAL HG23 H N N 576 VAL HXT H N N 577 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BGM P OP1 doub N N 70 BGM P OP2 sing N N 71 BGM P "O5'" sing N N 72 BGM P OP3 sing N N 73 BGM OP2 HOP2 sing N N 74 BGM "O5'" "C5'" sing N N 75 BGM "C5'" "C4'" sing N N 76 BGM "C5'" "H5'" sing N N 77 BGM "C5'" "H5''" sing N N 78 BGM "C4'" "O4'" sing N N 79 BGM "C4'" "C3'" sing N N 80 BGM "C4'" "H4'" sing N N 81 BGM "O4'" "C1'" sing N N 82 BGM "C1'" N9 sing N N 83 BGM "C1'" "C2'" sing N N 84 BGM "C1'" "H1'" sing N N 85 BGM N9 C8 sing Y N 86 BGM N9 C4 sing Y N 87 BGM C8 N7 doub Y N 88 BGM C8 BR sing N N 89 BGM N7 C5 sing Y N 90 BGM C5 C4 doub Y N 91 BGM C5 C6 sing N N 92 BGM C4 N3 sing N N 93 BGM N3 C2 doub N N 94 BGM C2 N2 sing N N 95 BGM C2 N1 sing N N 96 BGM N2 H21 sing N N 97 BGM N2 H22 sing N N 98 BGM N1 C6 sing N N 99 BGM N1 H1 sing N N 100 BGM C6 O6 doub N N 101 BGM "C2'" "C3'" sing N N 102 BGM "C2'" "H2'" sing N N 103 BGM "C2'" "H2''" sing N N 104 BGM "C3'" "O3'" sing N N 105 BGM "C3'" "H3'" sing N N 106 BGM "O3'" "HO3'" sing N N 107 BGM OP3 HOP3 sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 DA OP3 P sing N N 122 DA OP3 HOP3 sing N N 123 DA P OP1 doub N N 124 DA P OP2 sing N N 125 DA P "O5'" sing N N 126 DA OP2 HOP2 sing N N 127 DA "O5'" "C5'" sing N N 128 DA "C5'" "C4'" sing N N 129 DA "C5'" "H5'" sing N N 130 DA "C5'" "H5''" sing N N 131 DA "C4'" "O4'" sing N N 132 DA "C4'" "C3'" sing N N 133 DA "C4'" "H4'" sing N N 134 DA "O4'" "C1'" sing N N 135 DA "C3'" "O3'" sing N N 136 DA "C3'" "C2'" sing N N 137 DA "C3'" "H3'" sing N N 138 DA "O3'" "HO3'" sing N N 139 DA "C2'" "C1'" sing N N 140 DA "C2'" "H2'" sing N N 141 DA "C2'" "H2''" sing N N 142 DA "C1'" N9 sing N N 143 DA "C1'" "H1'" sing N N 144 DA N9 C8 sing Y N 145 DA N9 C4 sing Y N 146 DA C8 N7 doub Y N 147 DA C8 H8 sing N N 148 DA N7 C5 sing Y N 149 DA C5 C6 sing Y N 150 DA C5 C4 doub Y N 151 DA C6 N6 sing N N 152 DA C6 N1 doub Y N 153 DA N6 H61 sing N N 154 DA N6 H62 sing N N 155 DA N1 C2 sing Y N 156 DA C2 N3 doub Y N 157 DA C2 H2 sing N N 158 DA N3 C4 sing Y N 159 DC OP3 P sing N N 160 DC OP3 HOP3 sing N N 161 DC P OP1 doub N N 162 DC P OP2 sing N N 163 DC P "O5'" sing N N 164 DC OP2 HOP2 sing N N 165 DC "O5'" "C5'" sing N N 166 DC "C5'" "C4'" sing N N 167 DC "C5'" "H5'" sing N N 168 DC "C5'" "H5''" sing N N 169 DC "C4'" "O4'" sing N N 170 DC "C4'" "C3'" sing N N 171 DC "C4'" "H4'" sing N N 172 DC "O4'" "C1'" sing N N 173 DC "C3'" "O3'" sing N N 174 DC "C3'" "C2'" sing N N 175 DC "C3'" "H3'" sing N N 176 DC "O3'" "HO3'" sing N N 177 DC "C2'" "C1'" sing N N 178 DC "C2'" "H2'" sing N N 179 DC "C2'" "H2''" sing N N 180 DC "C1'" N1 sing N N 181 DC "C1'" "H1'" sing N N 182 DC N1 C2 sing N N 183 DC N1 C6 sing N N 184 DC C2 O2 doub N N 185 DC C2 N3 sing N N 186 DC N3 C4 doub N N 187 DC C4 N4 sing N N 188 DC C4 C5 sing N N 189 DC N4 H41 sing N N 190 DC N4 H42 sing N N 191 DC C5 C6 doub N N 192 DC C5 H5 sing N N 193 DC C6 H6 sing N N 194 DG OP3 P sing N N 195 DG OP3 HOP3 sing N N 196 DG P OP1 doub N N 197 DG P OP2 sing N N 198 DG P "O5'" sing N N 199 DG OP2 HOP2 sing N N 200 DG "O5'" "C5'" sing N N 201 DG "C5'" "C4'" sing N N 202 DG "C5'" "H5'" sing N N 203 DG "C5'" "H5''" sing N N 204 DG "C4'" "O4'" sing N N 205 DG "C4'" "C3'" sing N N 206 DG "C4'" "H4'" sing N N 207 DG "O4'" "C1'" sing N N 208 DG "C3'" "O3'" sing N N 209 DG "C3'" "C2'" sing N N 210 DG "C3'" "H3'" sing N N 211 DG "O3'" "HO3'" sing N N 212 DG "C2'" "C1'" sing N N 213 DG "C2'" "H2'" sing N N 214 DG "C2'" "H2''" sing N N 215 DG "C1'" N9 sing N N 216 DG "C1'" "H1'" sing N N 217 DG N9 C8 sing Y N 218 DG N9 C4 sing Y N 219 DG C8 N7 doub Y N 220 DG C8 H8 sing N N 221 DG N7 C5 sing Y N 222 DG C5 C6 sing N N 223 DG C5 C4 doub Y N 224 DG C6 O6 doub N N 225 DG C6 N1 sing N N 226 DG N1 C2 sing N N 227 DG N1 H1 sing N N 228 DG C2 N2 sing N N 229 DG C2 N3 doub N N 230 DG N2 H21 sing N N 231 DG N2 H22 sing N N 232 DG N3 C4 sing N N 233 DT OP3 P sing N N 234 DT OP3 HOP3 sing N N 235 DT P OP1 doub N N 236 DT P OP2 sing N N 237 DT P "O5'" sing N N 238 DT OP2 HOP2 sing N N 239 DT "O5'" "C5'" sing N N 240 DT "C5'" "C4'" sing N N 241 DT "C5'" "H5'" sing N N 242 DT "C5'" "H5''" sing N N 243 DT "C4'" "O4'" sing N N 244 DT "C4'" "C3'" sing N N 245 DT "C4'" "H4'" sing N N 246 DT "O4'" "C1'" sing N N 247 DT "C3'" "O3'" sing N N 248 DT "C3'" "C2'" sing N N 249 DT "C3'" "H3'" sing N N 250 DT "O3'" "HO3'" sing N N 251 DT "C2'" "C1'" sing N N 252 DT "C2'" "H2'" sing N N 253 DT "C2'" "H2''" sing N N 254 DT "C1'" N1 sing N N 255 DT "C1'" "H1'" sing N N 256 DT N1 C2 sing N N 257 DT N1 C6 sing N N 258 DT C2 O2 doub N N 259 DT C2 N3 sing N N 260 DT N3 C4 sing N N 261 DT N3 H3 sing N N 262 DT C4 O4 doub N N 263 DT C4 C5 sing N N 264 DT C5 C7 sing N N 265 DT C5 C6 doub N N 266 DT C7 H71 sing N N 267 DT C7 H72 sing N N 268 DT C7 H73 sing N N 269 DT C6 H6 sing N N 270 GLN N CA sing N N 271 GLN N H sing N N 272 GLN N H2 sing N N 273 GLN CA C sing N N 274 GLN CA CB sing N N 275 GLN CA HA sing N N 276 GLN C O doub N N 277 GLN C OXT sing N N 278 GLN CB CG sing N N 279 GLN CB HB2 sing N N 280 GLN CB HB3 sing N N 281 GLN CG CD sing N N 282 GLN CG HG2 sing N N 283 GLN CG HG3 sing N N 284 GLN CD OE1 doub N N 285 GLN CD NE2 sing N N 286 GLN NE2 HE21 sing N N 287 GLN NE2 HE22 sing N N 288 GLN OXT HXT sing N N 289 GLU N CA sing N N 290 GLU N H sing N N 291 GLU N H2 sing N N 292 GLU CA C sing N N 293 GLU CA CB sing N N 294 GLU CA HA sing N N 295 GLU C O doub N N 296 GLU C OXT sing N N 297 GLU CB CG sing N N 298 GLU CB HB2 sing N N 299 GLU CB HB3 sing N N 300 GLU CG CD sing N N 301 GLU CG HG2 sing N N 302 GLU CG HG3 sing N N 303 GLU CD OE1 doub N N 304 GLU CD OE2 sing N N 305 GLU OE2 HE2 sing N N 306 GLU OXT HXT sing N N 307 GLY N CA sing N N 308 GLY N H sing N N 309 GLY N H2 sing N N 310 GLY CA C sing N N 311 GLY CA HA2 sing N N 312 GLY CA HA3 sing N N 313 GLY C O doub N N 314 GLY C OXT sing N N 315 GLY OXT HXT sing N N 316 HIS N CA sing N N 317 HIS N H sing N N 318 HIS N H2 sing N N 319 HIS CA C sing N N 320 HIS CA CB sing N N 321 HIS CA HA sing N N 322 HIS C O doub N N 323 HIS C OXT sing N N 324 HIS CB CG sing N N 325 HIS CB HB2 sing N N 326 HIS CB HB3 sing N N 327 HIS CG ND1 sing Y N 328 HIS CG CD2 doub Y N 329 HIS ND1 CE1 doub Y N 330 HIS ND1 HD1 sing N N 331 HIS CD2 NE2 sing Y N 332 HIS CD2 HD2 sing N N 333 HIS CE1 NE2 sing Y N 334 HIS CE1 HE1 sing N N 335 HIS NE2 HE2 sing N N 336 HIS OXT HXT sing N N 337 HOH O H1 sing N N 338 HOH O H2 sing N N 339 ILE N CA sing N N 340 ILE N H sing N N 341 ILE N H2 sing N N 342 ILE CA C sing N N 343 ILE CA CB sing N N 344 ILE CA HA sing N N 345 ILE C O doub N N 346 ILE C OXT sing N N 347 ILE CB CG1 sing N N 348 ILE CB CG2 sing N N 349 ILE CB HB sing N N 350 ILE CG1 CD1 sing N N 351 ILE CG1 HG12 sing N N 352 ILE CG1 HG13 sing N N 353 ILE CG2 HG21 sing N N 354 ILE CG2 HG22 sing N N 355 ILE CG2 HG23 sing N N 356 ILE CD1 HD11 sing N N 357 ILE CD1 HD12 sing N N 358 ILE CD1 HD13 sing N N 359 ILE OXT HXT sing N N 360 LEU N CA sing N N 361 LEU N H sing N N 362 LEU N H2 sing N N 363 LEU CA C sing N N 364 LEU CA CB sing N N 365 LEU CA HA sing N N 366 LEU C O doub N N 367 LEU C OXT sing N N 368 LEU CB CG sing N N 369 LEU CB HB2 sing N N 370 LEU CB HB3 sing N N 371 LEU CG CD1 sing N N 372 LEU CG CD2 sing N N 373 LEU CG HG sing N N 374 LEU CD1 HD11 sing N N 375 LEU CD1 HD12 sing N N 376 LEU CD1 HD13 sing N N 377 LEU CD2 HD21 sing N N 378 LEU CD2 HD22 sing N N 379 LEU CD2 HD23 sing N N 380 LEU OXT HXT sing N N 381 LYS N CA sing N N 382 LYS N H sing N N 383 LYS N H2 sing N N 384 LYS CA C sing N N 385 LYS CA CB sing N N 386 LYS CA HA sing N N 387 LYS C O doub N N 388 LYS C OXT sing N N 389 LYS CB CG sing N N 390 LYS CB HB2 sing N N 391 LYS CB HB3 sing N N 392 LYS CG CD sing N N 393 LYS CG HG2 sing N N 394 LYS CG HG3 sing N N 395 LYS CD CE sing N N 396 LYS CD HD2 sing N N 397 LYS CD HD3 sing N N 398 LYS CE NZ sing N N 399 LYS CE HE2 sing N N 400 LYS CE HE3 sing N N 401 LYS NZ HZ1 sing N N 402 LYS NZ HZ2 sing N N 403 LYS NZ HZ3 sing N N 404 LYS OXT HXT sing N N 405 MET N CA sing N N 406 MET N H sing N N 407 MET N H2 sing N N 408 MET CA C sing N N 409 MET CA CB sing N N 410 MET CA HA sing N N 411 MET C O doub N N 412 MET C OXT sing N N 413 MET CB CG sing N N 414 MET CB HB2 sing N N 415 MET CB HB3 sing N N 416 MET CG SD sing N N 417 MET CG HG2 sing N N 418 MET CG HG3 sing N N 419 MET SD CE sing N N 420 MET CE HE1 sing N N 421 MET CE HE2 sing N N 422 MET CE HE3 sing N N 423 MET OXT HXT sing N N 424 PHE N CA sing N N 425 PHE N H sing N N 426 PHE N H2 sing N N 427 PHE CA C sing N N 428 PHE CA CB sing N N 429 PHE CA HA sing N N 430 PHE C O doub N N 431 PHE C OXT sing N N 432 PHE CB CG sing N N 433 PHE CB HB2 sing N N 434 PHE CB HB3 sing N N 435 PHE CG CD1 doub Y N 436 PHE CG CD2 sing Y N 437 PHE CD1 CE1 sing Y N 438 PHE CD1 HD1 sing N N 439 PHE CD2 CE2 doub Y N 440 PHE CD2 HD2 sing N N 441 PHE CE1 CZ doub Y N 442 PHE CE1 HE1 sing N N 443 PHE CE2 CZ sing Y N 444 PHE CE2 HE2 sing N N 445 PHE CZ HZ sing N N 446 PHE OXT HXT sing N N 447 PO4 P O1 doub N N 448 PO4 P O2 sing N N 449 PO4 P O3 sing N N 450 PO4 P O4 sing N N 451 PRO N CA sing N N 452 PRO N CD sing N N 453 PRO N H sing N N 454 PRO CA C sing N N 455 PRO CA CB sing N N 456 PRO CA HA sing N N 457 PRO C O doub N N 458 PRO C OXT sing N N 459 PRO CB CG sing N N 460 PRO CB HB2 sing N N 461 PRO CB HB3 sing N N 462 PRO CG CD sing N N 463 PRO CG HG2 sing N N 464 PRO CG HG3 sing N N 465 PRO CD HD2 sing N N 466 PRO CD HD3 sing N N 467 PRO OXT HXT sing N N 468 SER N CA sing N N 469 SER N H sing N N 470 SER N H2 sing N N 471 SER CA C sing N N 472 SER CA CB sing N N 473 SER CA HA sing N N 474 SER C O doub N N 475 SER C OXT sing N N 476 SER CB OG sing N N 477 SER CB HB2 sing N N 478 SER CB HB3 sing N N 479 SER OG HG sing N N 480 SER OXT HXT sing N N 481 THR N CA sing N N 482 THR N H sing N N 483 THR N H2 sing N N 484 THR CA C sing N N 485 THR CA CB sing N N 486 THR CA HA sing N N 487 THR C O doub N N 488 THR C OXT sing N N 489 THR CB OG1 sing N N 490 THR CB CG2 sing N N 491 THR CB HB sing N N 492 THR OG1 HG1 sing N N 493 THR CG2 HG21 sing N N 494 THR CG2 HG22 sing N N 495 THR CG2 HG23 sing N N 496 THR OXT HXT sing N N 497 TRP N CA sing N N 498 TRP N H sing N N 499 TRP N H2 sing N N 500 TRP CA C sing N N 501 TRP CA CB sing N N 502 TRP CA HA sing N N 503 TRP C O doub N N 504 TRP C OXT sing N N 505 TRP CB CG sing N N 506 TRP CB HB2 sing N N 507 TRP CB HB3 sing N N 508 TRP CG CD1 doub Y N 509 TRP CG CD2 sing Y N 510 TRP CD1 NE1 sing Y N 511 TRP CD1 HD1 sing N N 512 TRP CD2 CE2 doub Y N 513 TRP CD2 CE3 sing Y N 514 TRP NE1 CE2 sing Y N 515 TRP NE1 HE1 sing N N 516 TRP CE2 CZ2 sing Y N 517 TRP CE3 CZ3 doub Y N 518 TRP CE3 HE3 sing N N 519 TRP CZ2 CH2 doub Y N 520 TRP CZ2 HZ2 sing N N 521 TRP CZ3 CH2 sing Y N 522 TRP CZ3 HZ3 sing N N 523 TRP CH2 HH2 sing N N 524 TRP OXT HXT sing N N 525 TYR N CA sing N N 526 TYR N H sing N N 527 TYR N H2 sing N N 528 TYR CA C sing N N 529 TYR CA CB sing N N 530 TYR CA HA sing N N 531 TYR C O doub N N 532 TYR C OXT sing N N 533 TYR CB CG sing N N 534 TYR CB HB2 sing N N 535 TYR CB HB3 sing N N 536 TYR CG CD1 doub Y N 537 TYR CG CD2 sing Y N 538 TYR CD1 CE1 sing Y N 539 TYR CD1 HD1 sing N N 540 TYR CD2 CE2 doub Y N 541 TYR CD2 HD2 sing N N 542 TYR CE1 CZ doub Y N 543 TYR CE1 HE1 sing N N 544 TYR CE2 CZ sing Y N 545 TYR CE2 HE2 sing N N 546 TYR CZ OH sing N N 547 TYR OH HH sing N N 548 TYR OXT HXT sing N N 549 VAL N CA sing N N 550 VAL N H sing N N 551 VAL N H2 sing N N 552 VAL CA C sing N N 553 VAL CA CB sing N N 554 VAL CA HA sing N N 555 VAL C O doub N N 556 VAL C OXT sing N N 557 VAL CB CG1 sing N N 558 VAL CB CG2 sing N N 559 VAL CB HB sing N N 560 VAL CG1 HG11 sing N N 561 VAL CG1 HG12 sing N N 562 VAL CG1 HG13 sing N N 563 VAL CG2 HG21 sing N N 564 VAL CG2 HG22 sing N N 565 VAL CG2 HG23 sing N N 566 VAL OXT HXT sing N N 567 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4NLN 'double helix' 4NLN 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 D DG 5 1_555 -0.254 -0.171 0.193 -1.546 -8.617 -1.542 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 B DC 2 1_555 D DG 4 1_555 0.265 -0.316 -0.144 1.227 -5.654 0.501 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 B DG 3 1_555 D DC 3 1_555 -0.180 -0.120 0.167 2.213 -4.403 -1.913 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1 1 B DA 4 1_555 D DT 2 1_555 0.039 -0.165 0.251 4.730 -2.995 -1.701 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1 1 B DC 5 1_555 D DG 1 1_555 0.358 -0.064 -0.225 11.341 0.545 0.596 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 B DT 7 1_555 C DA 10 1_555 -0.842 -0.274 -0.335 -14.456 1.781 2.078 6 T_DT7:DA10_P T 7 ? P 10 ? 20 1 1 B DC 8 1_555 C DG 9 1_555 0.562 -0.073 -0.468 6.171 -16.325 6.091 7 T_DC8:DG9_P T 8 ? P 9 ? 19 1 1 B DG 9 1_555 C DC 8 1_555 -0.340 -0.348 -0.055 0.492 -2.504 -0.065 8 T_DG9:DC8_P T 9 ? P 8 ? 19 1 1 B DC 10 1_555 C DG 7 1_555 0.262 -0.176 -0.048 6.880 -7.135 -1.156 9 T_DC10:DG7_P T 10 ? P 7 ? 19 1 1 B DA 11 1_555 C DT 6 1_555 0.110 0.105 0.421 5.730 -12.509 1.651 10 T_DA11:DT6_P T 11 ? P 6 ? 20 1 1 B DT 12 1_555 C DA 5 1_555 0.083 -0.004 -0.309 12.129 -11.005 3.038 11 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 B DC 13 1_555 C DG 4 1_555 0.368 -0.305 0.079 -2.178 -12.859 1.759 12 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 B DA 14 1_555 C DT 3 1_555 -0.184 -0.070 0.173 -5.753 -6.441 -0.489 13 T_DA14:DT3_P T 14 ? P 3 ? 20 1 1 B DG 15 1_555 C DC 2 1_555 -0.208 -0.159 0.194 6.614 -10.772 -2.355 14 T_DG15:DC2_P T 15 ? P 2 ? 19 1 1 B DC 16 1_555 C DG 1 1_555 0.148 -0.309 0.141 8.537 -14.707 0.905 15 T_DC16:DG1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 D DG 5 1_555 B DC 2 1_555 D DG 4 1_555 1.128 0.510 3.233 6.030 2.234 40.134 0.483 -0.943 3.383 3.231 -8.718 40.625 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 B DC 2 1_555 D DG 4 1_555 B DG 3 1_555 D DC 3 1_555 -1.012 0.651 3.304 -6.692 6.656 33.091 -0.002 0.603 3.499 11.400 11.461 34.375 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 B DG 3 1_555 D DC 3 1_555 B DA 4 1_555 D DT 2 1_555 -0.358 -0.195 3.198 -1.698 -1.146 37.329 -0.156 0.340 3.215 -1.789 2.650 37.383 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 B DA 4 1_555 D DT 2 1_555 B DC 5 1_555 D DG 1 1_555 0.719 -0.357 3.203 3.160 3.159 28.450 -1.414 -0.749 3.205 6.377 -6.380 28.791 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 B DT 7 1_555 C DA 10 1_555 B DC 8 1_555 C DG 9 1_555 -0.285 0.218 3.017 4.224 5.694 29.296 -0.655 1.344 2.937 11.055 -8.200 30.124 5 TT_DT7DC8:DG9DA10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 B DC 8 1_555 C DG 9 1_555 B DG 9 1_555 C DC 8 1_555 -1.298 0.899 3.389 -8.752 16.077 32.248 -1.088 0.683 3.649 26.454 14.401 36.961 6 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 B DG 9 1_555 C DC 8 1_555 B DC 10 1_555 C DG 7 1_555 -0.264 -0.281 3.221 -0.399 0.900 30.476 -0.711 0.423 3.214 1.712 0.759 30.492 7 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 B DC 10 1_555 C DG 7 1_555 B DA 11 1_555 C DT 6 1_555 0.068 -0.006 3.201 -1.832 7.502 38.423 -0.889 -0.316 3.138 11.261 2.749 39.162 8 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 B DA 11 1_555 C DT 6 1_555 B DT 12 1_555 C DA 5 1_555 0.609 -0.475 3.144 6.278 -5.667 30.189 0.183 0.049 3.236 -10.620 -11.765 31.324 9 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 B DT 12 1_555 C DA 5 1_555 B DC 13 1_555 C DG 4 1_555 0.147 -0.104 3.472 0.052 3.210 42.239 -0.491 -0.197 3.456 4.447 -0.072 42.355 10 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 B DC 13 1_555 C DG 4 1_555 B DA 14 1_555 C DT 3 1_555 -0.292 -0.158 3.289 -1.318 5.232 33.156 -1.134 0.289 3.236 9.093 2.291 33.580 11 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 B DA 14 1_555 C DT 3 1_555 B DG 15 1_555 C DC 2 1_555 0.363 -0.497 3.045 -1.618 4.278 30.368 -1.710 -0.977 2.926 8.108 3.066 30.703 12 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 B DG 15 1_555 C DC 2 1_555 B DC 16 1_555 C DG 1 1_555 -0.158 -0.704 3.173 -3.109 5.499 35.379 -1.892 -0.168 3.036 8.961 5.065 35.920 13 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ? # _atom_sites.entry_id 4NLN _atom_sites.fract_transf_matrix[1][1] 0.018197 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005421 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012646 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019002 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C MG N NA O P S # loop_