HEADER TRANSPORT PROTEIN 16-NOV-13 4NN3 TITLE CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM TITLE 2 DESULFOVIBRIO SALEXIGENS (DESAL_2161), TARGET EFI-510109, WITH BOUND TITLE 3 OROTIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRAP PERIPLASMIC SOLUTE BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO SALEXIGENS; SOURCE 3 ORGANISM_TAXID: 526222; SOURCE 4 STRAIN: ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763; SOURCE 5 GENE: DESAL_2161; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TRAP PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,L.L.MORISCO,S.R.WASSERMAN,S.SOJITRA, AUTHOR 2 M.STEAD,J.D.ATTONITO,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,B.HILLERICH, AUTHOR 3 J.LOVE,R.D.SEIDEL,H.J.IMKER,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION AUTHOR 4 INITIATIVE (EFI) REVDAT 5 03-APR-24 4NN3 1 REMARK REVDAT 4 28-FEB-24 4NN3 1 REMARK SEQADV REVDAT 3 22-NOV-17 4NN3 1 REMARK REVDAT 2 25-FEB-15 4NN3 1 JRNL REVDAT 1 04-DEC-13 4NN3 0 JRNL AUTH M.W.VETTING,N.AL-OBAIDI,S.ZHAO,B.SAN FRANCISCO,J.KIM, JRNL AUTH 2 D.J.WICHELECKI,J.T.BOUVIER,J.O.SOLBIATI,H.VU,X.ZHANG, JRNL AUTH 3 D.A.RODIONOV,J.D.LOVE,B.S.HILLERICH,R.D.SEIDEL,R.J.QUINN, JRNL AUTH 4 A.L.OSTERMAN,J.E.CRONAN,M.P.JACOBSON,J.A.GERLT,S.C.ALMO JRNL TITL EXPERIMENTAL STRATEGIES FOR FUNCTIONAL ANNOTATION AND JRNL TITL 2 METABOLISM DISCOVERY: TARGETED SCREENING OF SOLUTE BINDING JRNL TITL 3 PROTEINS AND UNBIASED PANNING OF METABOLOMES. JRNL REF BIOCHEMISTRY V. 54 909 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25540822 JRNL DOI 10.1021/BI501388Y REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 53419 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2726 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.7358 - 3.7337 0.97 3038 143 0.1437 0.1647 REMARK 3 2 3.7337 - 2.9643 0.99 2918 163 0.1324 0.1705 REMARK 3 3 2.9643 - 2.5898 0.99 2858 146 0.1461 0.1700 REMARK 3 4 2.5898 - 2.3531 0.99 2854 155 0.1404 0.1586 REMARK 3 5 2.3531 - 2.1845 0.98 2812 154 0.1347 0.1695 REMARK 3 6 2.1845 - 2.0557 0.97 2794 142 0.1410 0.1944 REMARK 3 7 2.0557 - 1.9528 0.97 2786 150 0.1431 0.1784 REMARK 3 8 1.9528 - 1.8678 0.97 2752 144 0.1443 0.1781 REMARK 3 9 1.8678 - 1.7959 0.95 2707 153 0.1469 0.1840 REMARK 3 10 1.7959 - 1.7339 0.94 2677 157 0.1593 0.2166 REMARK 3 11 1.7339 - 1.6797 0.93 2608 164 0.1563 0.1947 REMARK 3 12 1.6797 - 1.6317 0.92 2601 123 0.1717 0.2196 REMARK 3 13 1.6317 - 1.5888 0.91 2603 120 0.1741 0.2203 REMARK 3 14 1.5888 - 1.5500 0.90 2540 144 0.1817 0.2503 REMARK 3 15 1.5500 - 1.5148 0.90 2541 142 0.1951 0.2415 REMARK 3 16 1.5148 - 1.4825 0.89 2523 122 0.2117 0.2384 REMARK 3 17 1.4825 - 1.4529 0.89 2466 147 0.2294 0.2767 REMARK 3 18 1.4529 - 1.4255 0.86 2453 132 0.2376 0.2766 REMARK 3 19 1.4255 - 1.4000 0.78 2162 125 0.2671 0.2975 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.000 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2541 REMARK 3 ANGLE : 1.232 3427 REMARK 3 CHIRALITY : 0.061 367 REMARK 3 PLANARITY : 0.007 450 REMARK 3 DIHEDRAL : 15.913 967 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9423 30.7412 16.0804 REMARK 3 T TENSOR REMARK 3 T11: 0.1058 T22: 0.0811 REMARK 3 T33: 0.1103 T12: -0.0274 REMARK 3 T13: -0.0082 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.9433 L22: 0.4598 REMARK 3 L33: 1.4394 L12: 0.0554 REMARK 3 L13: 0.5429 L23: -0.1182 REMARK 3 S TENSOR REMARK 3 S11: -0.0356 S12: -0.0283 S13: 0.1578 REMARK 3 S21: 0.0454 S22: -0.0064 S23: -0.1064 REMARK 3 S31: -0.2300 S32: 0.1962 S33: 0.0402 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7919 24.2717 0.6684 REMARK 3 T TENSOR REMARK 3 T11: 0.0835 T22: 0.1500 REMARK 3 T33: 0.0971 T12: -0.0271 REMARK 3 T13: 0.0184 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 2.8855 L22: 1.4180 REMARK 3 L33: 1.9324 L12: -0.5125 REMARK 3 L13: 0.5648 L23: -0.5327 REMARK 3 S TENSOR REMARK 3 S11: 0.0161 S12: 0.2616 S13: -0.0368 REMARK 3 S21: -0.1984 S22: 0.1483 S23: -0.1179 REMARK 3 S31: -0.0284 S32: 0.2161 S33: -0.1662 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7197 12.4765 10.8708 REMARK 3 T TENSOR REMARK 3 T11: 0.0807 T22: 0.0603 REMARK 3 T33: 0.0894 T12: 0.0092 REMARK 3 T13: -0.0039 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.7497 L22: 0.5928 REMARK 3 L33: 0.5981 L12: 0.1701 REMARK 3 L13: 0.1487 L23: 0.1836 REMARK 3 S TENSOR REMARK 3 S11: 0.0070 S12: -0.0129 S13: -0.0753 REMARK 3 S21: 0.0299 S22: 0.0089 S23: -0.0320 REMARK 3 S31: 0.0983 S32: 0.0379 S33: -0.0178 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.9083 21.3606 1.0629 REMARK 3 T TENSOR REMARK 3 T11: 0.0705 T22: 0.0670 REMARK 3 T33: 0.0559 T12: 0.0124 REMARK 3 T13: 0.0067 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 0.6568 L22: 0.3666 REMARK 3 L33: 1.0807 L12: -0.1452 REMARK 3 L13: 0.1906 L23: 0.0713 REMARK 3 S TENSOR REMARK 3 S11: 0.0321 S12: 0.0940 S13: 0.0154 REMARK 3 S21: -0.0420 S22: -0.0369 S23: 0.0010 REMARK 3 S31: -0.0675 S32: -0.0766 S33: 0.0020 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 296 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6099 25.6650 15.0407 REMARK 3 T TENSOR REMARK 3 T11: 0.0891 T22: 0.0653 REMARK 3 T33: 0.0798 T12: 0.0115 REMARK 3 T13: 0.0133 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 1.0736 L22: 0.3265 REMARK 3 L33: 1.1644 L12: 0.0609 REMARK 3 L13: 0.5018 L23: 0.1749 REMARK 3 S TENSOR REMARK 3 S11: 0.0032 S12: -0.0908 S13: 0.0270 REMARK 3 S21: 0.0198 S22: -0.0311 S23: 0.0223 REMARK 3 S31: -0.0701 S32: -0.1617 S33: 0.0276 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 297 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5396 3.3174 7.5220 REMARK 3 T TENSOR REMARK 3 T11: 0.1494 T22: 0.0969 REMARK 3 T33: 0.1743 T12: -0.0188 REMARK 3 T13: -0.0091 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.1151 L22: 0.3260 REMARK 3 L33: 0.6729 L12: -0.4501 REMARK 3 L13: 0.5589 L23: -0.0238 REMARK 3 S TENSOR REMARK 3 S11: 0.1195 S12: -0.0155 S13: -0.2708 REMARK 3 S21: 0.0984 S22: -0.0681 S23: 0.1507 REMARK 3 S31: 0.2219 S32: -0.0850 S33: -0.0470 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NN3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083409. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53494 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 147.006 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.60000 REMARK 200 R SYM FOR SHELL (I) : 0.60000 REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX AUTOSOLVE REMARK 200 STARTING MODEL: STRUCTURE SOLVED INITIALLY IN SAME CRYSTAL FORM REMARK 200 SOAKED WITH SODIUM IODIDE AND SAD PHASED REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 30.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40.2 MG/ML PROTEIN IN 10 MM HEPES, PH REMARK 280 7.5, 5 MM DTT, RESERVOIR: MCSG1(H9) (0.1 M BIS-TRIS, PH 5.5, 25% REMARK 280 W/V PEG3350), CRYOPROTECTION: 4:1 50% W/V PEG3350:RESERVOIR, REMARK 280 LIGAND COPURIFIED WITH PROTEIN, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 24.67300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 73.50300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.67300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 73.50300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 692 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 PHE A 3 REMARK 465 PHE A 4 REMARK 465 GLY A 5 REMARK 465 ARG A 6 REMARK 465 ILE A 7 REMARK 465 VAL A 8 REMARK 465 THR A 9 REMARK 465 VAL A 10 REMARK 465 ALA A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 CYS A 15 REMARK 465 MET A 16 REMARK 465 VAL A 17 REMARK 465 MET A 18 REMARK 465 GLY A 19 REMARK 465 GLY A 20 REMARK 465 VAL A 21 REMARK 465 ILE A 22 REMARK 465 SER A 23 REMARK 465 ALA A 24 REMARK 465 ASN A 25 REMARK 465 ALA A 26 REMARK 465 ALA A 27 REMARK 465 LYS A 339 REMARK 465 ALA A 340 REMARK 465 GLU A 341 REMARK 465 ASN A 342 REMARK 465 LEU A 343 REMARK 465 TYR A 344 REMARK 465 PHE A 345 REMARK 465 GLN A 346 REMARK 465 GLY A 347 REMARK 465 HIS A 348 REMARK 465 HIS A 349 REMARK 465 HIS A 350 REMARK 465 HIS A 351 REMARK 465 HIS A 352 REMARK 465 HIS A 353 REMARK 465 HIS A 354 REMARK 465 HIS A 355 REMARK 465 HIS A 356 REMARK 465 HIS A 357 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 300 O HOH A 834 2.04 REMARK 500 OE1 GLN A 324 O HOH A 775 2.08 REMARK 500 O HOH A 744 O HOH A 869 2.10 REMARK 500 O HOH A 879 O HOH A 895 2.15 REMARK 500 O HOH A 714 O HOH A 869 2.16 REMARK 500 NZ LYS A 221 O HOH A 845 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 101 86.12 -150.93 REMARK 500 ASN A 149 46.66 -149.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ORO A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-510109 RELATED DB: TARGETTRACK DBREF 4NN3 A 1 339 UNP C6BW16 C6BW16_DESAD 1 339 SEQADV 4NN3 ALA A 340 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 GLU A 341 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 ASN A 342 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 LEU A 343 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 TYR A 344 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 PHE A 345 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 GLN A 346 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 GLY A 347 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 HIS A 348 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 HIS A 349 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 HIS A 350 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 HIS A 351 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 HIS A 352 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 HIS A 353 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 HIS A 354 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 HIS A 355 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 HIS A 356 UNP C6BW16 EXPRESSION TAG SEQADV 4NN3 HIS A 357 UNP C6BW16 EXPRESSION TAG SEQRES 1 A 357 MET LYS PHE PHE GLY ARG ILE VAL THR VAL ALA LEU ALA SEQRES 2 A 357 LEU CYS MET VAL MET GLY GLY VAL ILE SER ALA ASN ALA SEQRES 3 A 357 ALA LYS TYR GLU ALA ARG ILE GLY HIS LEU GLU SER PRO SEQRES 4 A 357 LEU GLN PRO ARG HIS GLN GLY LEU GLU LYS VAL ALA LYS SEQRES 5 A 357 LEU VAL LYS GLU ARG THR ASN GLY GLU VAL GLU PHE LYS SEQRES 6 A 357 ILE PHE PRO SER SER GLN LEU GLY ASN GLN ARG GLN MET SEQRES 7 A 357 ASN GLU GLY VAL GLN PHE GLY THR ILE GLU GLY THR VAL SEQRES 8 A 357 SER ALA ALA ALA PHE LEU GLY GLY PHE ASN PRO VAL VAL SEQRES 9 A 357 SER ILE MET ASP ILE PRO PHE LEU LEU PRO VAL ASP ARG SEQRES 10 A 357 ALA LYS ALA GLN GLU LEU ARG GLN GLY LYS PHE GLY LYS SEQRES 11 A 357 ALA LEU LEU LYS SER PHE ASP SER ARG GLY PHE LYS ALA SEQRES 12 A 357 ILE ALA THR TRP PRO ASN GLY ARG LYS ASN PHE THR SER SEQRES 13 A 357 ASN LYS PRO ILE SER THR ILE ALA ASP TYR LYS GLY GLN SEQRES 14 A 357 SER PHE ARG VAL MET ASP SER LYS ILE LEU ILE GLU GLN SEQRES 15 A 357 PHE ALA ALA ILE GLY ALA SER ALA ILE ALA LEU PRO PHE SEQRES 16 A 357 GLY GLU LEU TYR THR ALA LEU GLN ASN GLY VAL VAL ASP SEQRES 17 A 357 GLY GLU GLU ASN PRO LEU ASP THR ILE GLN ARG MET LYS SEQRES 18 A 357 PHE TYR GLU VAL GLN LYS TYR LEU VAL THR SER GLU HIS SEQRES 19 A 357 GLY ALA MET GLU ASP TYR VAL LEU PHE ASN PRO SER TYR SEQRES 20 A 357 TRP GLU SER LEU PRO GLU ASN TYR GLN LYS ILE ILE VAL SEQRES 21 A 357 ASP THR PHE ILE GLU VAL MET PRO GLY VAL GLU ALA HIS SEQRES 22 A 357 LYS GLU GLN ALA GLN LYS ASP ALA LEU GLU VAL ILE LYS SEQRES 23 A 357 LYS ALA GLY VAL GLN VAL THR PRO LEU GLN ALA ALA ASP SEQRES 24 A 357 ARG ALA ALA MET ARG GLU LEU MET TYR PRO LYS THR LYS SEQRES 25 A 357 ALA ALA TYR LEU ALA ARG ALA GLY ALA GLN GLY GLN GLU SEQRES 26 A 357 LEU ILE LYS LEU TYR GLU GLU GLU TYR ALA ARG ILE VAL SEQRES 27 A 357 LYS ALA GLU ASN LEU TYR PHE GLN GLY HIS HIS HIS HIS SEQRES 28 A 357 HIS HIS HIS HIS HIS HIS HET CL A 401 1 HET PGE A 402 24 HET ORO A 403 11 HETNAM CL CHLORIDE ION HETNAM PGE TRIETHYLENE GLYCOL HETNAM ORO OROTIC ACID FORMUL 2 CL CL 1- FORMUL 3 PGE C6 H14 O4 FORMUL 4 ORO C5 H4 N2 O4 FORMUL 5 HOH *434(H2 O) HELIX 1 1 GLN A 41 THR A 58 1 18 HELIX 2 2 ASN A 74 GLY A 85 1 12 HELIX 3 3 ALA A 95 LEU A 97 5 3 HELIX 4 4 ASN A 101 ILE A 109 5 9 HELIX 5 5 ASP A 116 GLN A 125 1 10 HELIX 6 6 GLY A 126 PHE A 136 1 11 HELIX 7 7 ASP A 137 GLY A 140 5 4 HELIX 8 8 THR A 162 LYS A 167 5 6 HELIX 9 9 SER A 176 ALA A 185 1 10 HELIX 10 10 PRO A 194 GLY A 196 5 3 HELIX 11 11 GLU A 197 ASN A 204 1 8 HELIX 12 12 PRO A 213 MET A 220 1 8 HELIX 13 13 LYS A 221 VAL A 225 5 5 HELIX 14 14 ASN A 244 LEU A 251 1 8 HELIX 15 15 PRO A 252 ALA A 288 1 37 HELIX 16 16 GLN A 296 VAL A 338 1 43 SHEET 1 A 5 VAL A 62 PHE A 67 0 SHEET 2 A 5 TYR A 29 GLY A 34 1 N ILE A 33 O PHE A 67 SHEET 3 A 5 GLY A 89 ALA A 93 1 O GLY A 89 N GLY A 34 SHEET 4 A 5 ALA A 236 PHE A 243 -1 O LEU A 242 N THR A 90 SHEET 5 A 5 LYS A 142 ARG A 151 -1 N GLY A 150 O MET A 237 SHEET 1 B 4 GLY A 209 ASN A 212 0 SHEET 2 B 4 ASN A 153 SER A 156 -1 N THR A 155 O GLU A 210 SHEET 3 B 4 TYR A 228 THR A 231 -1 O VAL A 230 N PHE A 154 SHEET 4 B 4 GLN A 291 PRO A 294 1 O GLN A 291 N LEU A 229 SHEET 1 C 2 SER A 170 VAL A 173 0 SHEET 2 C 2 SER A 189 ALA A 192 1 O ILE A 191 N VAL A 173 SITE 1 AC1 4 ASN A 74 GLN A 75 PRO A 194 PHE A 195 SITE 1 AC2 7 GLY A 99 PHE A 100 ASP A 175 LYS A 177 SITE 2 AC2 7 ARG A 318 HOH A 556 HOH A 695 SITE 1 AC3 13 LEU A 36 GLU A 37 ARG A 43 PHE A 96 SITE 2 AC3 13 ARG A 172 MET A 174 PHE A 195 ASN A 212 SITE 3 AC3 13 THR A 216 MET A 237 HOH A 509 HOH A 531 SITE 4 AC3 13 HOH A 532 CRYST1 49.346 147.006 39.272 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020265 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006802 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025463 0.00000