data_4NOF # _entry.id 4NOF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NOF pdb_00004nof 10.2210/pdb4nof/pdb RCSB RCSB083456 ? ? WWPDB D_1000083456 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-04 2 'Structure model' 1 1 2020-07-29 3 'Structure model' 1 2 2023-09-20 4 'Structure model' 1 3 2024-11-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Refinement description' 8 3 'Structure model' 'Structure summary' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' entity 3 2 'Structure model' pdbx_chem_comp_identifier 4 2 'Structure model' pdbx_entity_nonpoly 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_ref_seq_dif 7 2 'Structure model' struct_site 8 2 'Structure model' struct_site_gen 9 3 'Structure model' chem_comp 10 3 'Structure model' chem_comp_atom 11 3 'Structure model' chem_comp_bond 12 3 'Structure model' database_2 13 3 'Structure model' pdbx_initial_refinement_model 14 4 'Structure model' pdbx_entry_details 15 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.name' 2 2 'Structure model' '_chem_comp.type' 3 2 'Structure model' '_entity.pdbx_description' 4 2 'Structure model' '_pdbx_entity_nonpoly.name' 5 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 2 'Structure model' '_struct_conn.pdbx_role' 7 2 'Structure model' '_struct_ref_seq_dif.details' 8 3 'Structure model' '_chem_comp.pdbx_synonyms' 9 3 'Structure model' '_database_2.pdbx_DOI' 10 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 4NOF _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-11-19 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4NOB . unspecified TargetTrack NYSGRC-006220 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sampathkumar, P.' 1 'Kumar, P.R.' 2 'Ahmed, M.' 3 'Banu, R.' 4 'Bhosle, R.' 5 'Calarese, D.A.' 6 'Celikgil, A.' 7 'Chamala, S.' 8 'Chan, M.K.' 9 'Chowdhury, S.' 10 'Fiser, A.' 11 'Garforth, S.J.' 12 'Glenn, A.S.' 13 'Hillerich, B.' 14 'Khafizov, K.' 15 'Attonito, J.' 16 'Love, J.D.' 17 'Patel, H.' 18 'Patel, R.' 19 'Seidel, R.D.' 20 'Smith, B.' 21 'Stead, M.' 22 'Casadevall, A.' 23 'Almo, S.C.' 24 'New York Structural Genomics Research Consortium (NYSGRC)' 25 'Atoms-to-Animals: The Immune Function Network (IFN)' 26 # _citation.id primary _citation.title 'Crystal structure of the second Ig domain from mouse Polymeric Immunoglobulin receptor' _citation.journal_abbrev 'to be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sampathkumar, P.' 1 ? primary 'Casadevall, A.' 2 ? primary 'Almo, S.C.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Polymeric immunoglobulin receptor' 13912.700 2 ? ? 'Ig-like V-type 2 domain residues 133-249' ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 146 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PIgR, Poly-Ig receptor, Secretory component' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QDYGGLPSDTHVYTKDIGRNVTIECPFKRENAPSKKSLCKKTNQSCELVIDSTEKVNPSYIGRAKLFMKGTDLTVFYVNI SHLTHNDAGLYICQAGEGPSADKKNVDLQVLAPEPELLAENLYFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;QDYGGLPSDTHVYTKDIGRNVTIECPFKRENAPSKKSLCKKTNQSCELVIDSTEKVNPSYIGRAKLFMKGTDLTVFYVNI SHLTHNDAGLYICQAGEGPSADKKNVDLQVLAPEPELLAENLYFQ ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier NYSGRC-006220 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 GLYCEROL GOL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ASP n 1 3 TYR n 1 4 GLY n 1 5 GLY n 1 6 LEU n 1 7 PRO n 1 8 SER n 1 9 ASP n 1 10 THR n 1 11 HIS n 1 12 VAL n 1 13 TYR n 1 14 THR n 1 15 LYS n 1 16 ASP n 1 17 ILE n 1 18 GLY n 1 19 ARG n 1 20 ASN n 1 21 VAL n 1 22 THR n 1 23 ILE n 1 24 GLU n 1 25 CYS n 1 26 PRO n 1 27 PHE n 1 28 LYS n 1 29 ARG n 1 30 GLU n 1 31 ASN n 1 32 ALA n 1 33 PRO n 1 34 SER n 1 35 LYS n 1 36 LYS n 1 37 SER n 1 38 LEU n 1 39 CYS n 1 40 LYS n 1 41 LYS n 1 42 THR n 1 43 ASN n 1 44 GLN n 1 45 SER n 1 46 CYS n 1 47 GLU n 1 48 LEU n 1 49 VAL n 1 50 ILE n 1 51 ASP n 1 52 SER n 1 53 THR n 1 54 GLU n 1 55 LYS n 1 56 VAL n 1 57 ASN n 1 58 PRO n 1 59 SER n 1 60 TYR n 1 61 ILE n 1 62 GLY n 1 63 ARG n 1 64 ALA n 1 65 LYS n 1 66 LEU n 1 67 PHE n 1 68 MET n 1 69 LYS n 1 70 GLY n 1 71 THR n 1 72 ASP n 1 73 LEU n 1 74 THR n 1 75 VAL n 1 76 PHE n 1 77 TYR n 1 78 VAL n 1 79 ASN n 1 80 ILE n 1 81 SER n 1 82 HIS n 1 83 LEU n 1 84 THR n 1 85 HIS n 1 86 ASN n 1 87 ASP n 1 88 ALA n 1 89 GLY n 1 90 LEU n 1 91 TYR n 1 92 ILE n 1 93 CYS n 1 94 GLN n 1 95 ALA n 1 96 GLY n 1 97 GLU n 1 98 GLY n 1 99 PRO n 1 100 SER n 1 101 ALA n 1 102 ASP n 1 103 LYS n 1 104 LYS n 1 105 ASN n 1 106 VAL n 1 107 ASP n 1 108 LEU n 1 109 GLN n 1 110 VAL n 1 111 LEU n 1 112 ALA n 1 113 PRO n 1 114 GLU n 1 115 PRO n 1 116 GLU n 1 117 LEU n 1 118 LEU n 1 119 ALA n 1 120 GLU n 1 121 ASN n 1 122 LEU n 1 123 TYR n 1 124 PHE n 1 125 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Pigr _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'cabbage looper' _entity_src_gen.pdbx_host_org_scientific_name 'Trichoplusia ni' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7111 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Hi5 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pIEX _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 128 ? ? ? A . n A 1 2 ASP 2 129 ? ? ? A . n A 1 3 TYR 3 130 ? ? ? A . n A 1 4 GLY 4 131 131 GLY GLY A . n A 1 5 GLY 5 132 132 GLY GLY A . n A 1 6 LEU 6 133 133 LEU LEU A . n A 1 7 PRO 7 134 134 PRO PRO A . n A 1 8 SER 8 135 135 SER SER A . n A 1 9 ASP 9 136 136 ASP ASP A . n A 1 10 THR 10 137 137 THR THR A . n A 1 11 HIS 11 138 138 HIS HIS A . n A 1 12 VAL 12 139 139 VAL VAL A . n A 1 13 TYR 13 140 140 TYR TYR A . n A 1 14 THR 14 141 141 THR THR A . n A 1 15 LYS 15 142 142 LYS LYS A . n A 1 16 ASP 16 143 143 ASP ASP A . n A 1 17 ILE 17 144 144 ILE ILE A . n A 1 18 GLY 18 145 145 GLY GLY A . n A 1 19 ARG 19 146 146 ARG ARG A . n A 1 20 ASN 20 147 147 ASN ASN A . n A 1 21 VAL 21 148 148 VAL VAL A . n A 1 22 THR 22 149 149 THR THR A . n A 1 23 ILE 23 150 150 ILE ILE A . n A 1 24 GLU 24 151 151 GLU GLU A . n A 1 25 CYS 25 152 152 CYS CYS A . n A 1 26 PRO 26 153 153 PRO PRO A . n A 1 27 PHE 27 154 154 PHE PHE A . n A 1 28 LYS 28 155 155 LYS LYS A . n A 1 29 ARG 29 156 156 ARG ARG A . n A 1 30 GLU 30 157 157 GLU GLU A . n A 1 31 ASN 31 158 158 ASN ASN A . n A 1 32 ALA 32 159 159 ALA ALA A . n A 1 33 PRO 33 160 160 PRO PRO A . n A 1 34 SER 34 161 161 SER SER A . n A 1 35 LYS 35 162 162 LYS LYS A . n A 1 36 LYS 36 163 163 LYS LYS A . n A 1 37 SER 37 164 164 SER SER A . n A 1 38 LEU 38 165 165 LEU LEU A . n A 1 39 CYS 39 166 166 CYS CYS A . n A 1 40 LYS 40 167 167 LYS LYS A . n A 1 41 LYS 41 168 168 LYS LYS A . n A 1 42 THR 42 169 169 THR THR A . n A 1 43 ASN 43 170 170 ASN ASN A . n A 1 44 GLN 44 171 171 GLN GLN A . n A 1 45 SER 45 172 172 SER SER A . n A 1 46 CYS 46 173 173 CYS CYS A . n A 1 47 GLU 47 174 174 GLU GLU A . n A 1 48 LEU 48 175 175 LEU LEU A . n A 1 49 VAL 49 176 176 VAL VAL A . n A 1 50 ILE 50 177 177 ILE ILE A . n A 1 51 ASP 51 178 178 ASP ASP A . n A 1 52 SER 52 179 179 SER SER A . n A 1 53 THR 53 180 180 THR THR A . n A 1 54 GLU 54 181 181 GLU GLU A . n A 1 55 LYS 55 182 182 LYS LYS A . n A 1 56 VAL 56 183 183 VAL VAL A . n A 1 57 ASN 57 184 184 ASN ASN A . n A 1 58 PRO 58 185 185 PRO PRO A . n A 1 59 SER 59 186 186 SER SER A . n A 1 60 TYR 60 187 187 TYR TYR A . n A 1 61 ILE 61 188 188 ILE ILE A . n A 1 62 GLY 62 189 189 GLY GLY A . n A 1 63 ARG 63 190 190 ARG ARG A . n A 1 64 ALA 64 191 191 ALA ALA A . n A 1 65 LYS 65 192 192 LYS LYS A . n A 1 66 LEU 66 193 193 LEU LEU A . n A 1 67 PHE 67 194 194 PHE PHE A . n A 1 68 MET 68 195 195 MET MET A . n A 1 69 LYS 69 196 196 LYS LYS A . n A 1 70 GLY 70 197 197 GLY GLY A . n A 1 71 THR 71 198 198 THR THR A . n A 1 72 ASP 72 199 199 ASP ASP A . n A 1 73 LEU 73 200 200 LEU LEU A . n A 1 74 THR 74 201 201 THR THR A . n A 1 75 VAL 75 202 202 VAL VAL A . n A 1 76 PHE 76 203 203 PHE PHE A . n A 1 77 TYR 77 204 204 TYR TYR A . n A 1 78 VAL 78 205 205 VAL VAL A . n A 1 79 ASN 79 206 206 ASN ASN A . n A 1 80 ILE 80 207 207 ILE ILE A . n A 1 81 SER 81 208 208 SER SER A . n A 1 82 HIS 82 209 209 HIS HIS A . n A 1 83 LEU 83 210 210 LEU LEU A . n A 1 84 THR 84 211 211 THR THR A . n A 1 85 HIS 85 212 212 HIS HIS A . n A 1 86 ASN 86 213 213 ASN ASN A . n A 1 87 ASP 87 214 214 ASP ASP A . n A 1 88 ALA 88 215 215 ALA ALA A . n A 1 89 GLY 89 216 216 GLY GLY A . n A 1 90 LEU 90 217 217 LEU LEU A . n A 1 91 TYR 91 218 218 TYR TYR A . n A 1 92 ILE 92 219 219 ILE ILE A . n A 1 93 CYS 93 220 220 CYS CYS A . n A 1 94 GLN 94 221 221 GLN GLN A . n A 1 95 ALA 95 222 222 ALA ALA A . n A 1 96 GLY 96 223 223 GLY GLY A . n A 1 97 GLU 97 224 224 GLU GLU A . n A 1 98 GLY 98 225 225 GLY GLY A . n A 1 99 PRO 99 226 226 PRO PRO A . n A 1 100 SER 100 227 227 SER SER A . n A 1 101 ALA 101 228 228 ALA ALA A . n A 1 102 ASP 102 229 229 ASP ASP A . n A 1 103 LYS 103 230 230 LYS LYS A . n A 1 104 LYS 104 231 231 LYS LYS A . n A 1 105 ASN 105 232 232 ASN ASN A . n A 1 106 VAL 106 233 233 VAL VAL A . n A 1 107 ASP 107 234 234 ASP ASP A . n A 1 108 LEU 108 235 235 LEU LEU A . n A 1 109 GLN 109 236 236 GLN GLN A . n A 1 110 VAL 110 237 237 VAL VAL A . n A 1 111 LEU 111 238 238 LEU LEU A . n A 1 112 ALA 112 239 239 ALA ALA A . n A 1 113 PRO 113 240 240 PRO PRO A . n A 1 114 GLU 114 241 241 GLU GLU A . n A 1 115 PRO 115 242 ? ? ? A . n A 1 116 GLU 116 243 ? ? ? A . n A 1 117 LEU 117 244 ? ? ? A . n A 1 118 LEU 118 245 ? ? ? A . n A 1 119 ALA 119 246 ? ? ? A . n A 1 120 GLU 120 247 ? ? ? A . n A 1 121 ASN 121 248 ? ? ? A . n A 1 122 LEU 122 249 ? ? ? A . n A 1 123 TYR 123 250 ? ? ? A . n A 1 124 PHE 124 251 ? ? ? A . n A 1 125 GLN 125 252 ? ? ? A . n B 1 1 GLN 1 128 ? ? ? B . n B 1 2 ASP 2 129 ? ? ? B . n B 1 3 TYR 3 130 ? ? ? B . n B 1 4 GLY 4 131 ? ? ? B . n B 1 5 GLY 5 132 ? ? ? B . n B 1 6 LEU 6 133 ? ? ? B . n B 1 7 PRO 7 134 ? ? ? B . n B 1 8 SER 8 135 ? ? ? B . n B 1 9 ASP 9 136 136 ASP ASP B . n B 1 10 THR 10 137 137 THR THR B . n B 1 11 HIS 11 138 138 HIS HIS B . n B 1 12 VAL 12 139 139 VAL VAL B . n B 1 13 TYR 13 140 140 TYR TYR B . n B 1 14 THR 14 141 141 THR THR B . n B 1 15 LYS 15 142 142 LYS LYS B . n B 1 16 ASP 16 143 143 ASP ASP B . n B 1 17 ILE 17 144 144 ILE ILE B . n B 1 18 GLY 18 145 145 GLY GLY B . n B 1 19 ARG 19 146 146 ARG ARG B . n B 1 20 ASN 20 147 147 ASN ASN B . n B 1 21 VAL 21 148 148 VAL VAL B . n B 1 22 THR 22 149 149 THR THR B . n B 1 23 ILE 23 150 150 ILE ILE B . n B 1 24 GLU 24 151 151 GLU GLU B . n B 1 25 CYS 25 152 152 CYS CYS B . n B 1 26 PRO 26 153 153 PRO PRO B . n B 1 27 PHE 27 154 154 PHE PHE B . n B 1 28 LYS 28 155 155 LYS LYS B . n B 1 29 ARG 29 156 156 ARG ARG B . n B 1 30 GLU 30 157 157 GLU GLU B . n B 1 31 ASN 31 158 158 ASN ASN B . n B 1 32 ALA 32 159 159 ALA ALA B . n B 1 33 PRO 33 160 160 PRO PRO B . n B 1 34 SER 34 161 161 SER SER B . n B 1 35 LYS 35 162 162 LYS LYS B . n B 1 36 LYS 36 163 163 LYS LYS B . n B 1 37 SER 37 164 164 SER SER B . n B 1 38 LEU 38 165 165 LEU LEU B . n B 1 39 CYS 39 166 166 CYS CYS B . n B 1 40 LYS 40 167 167 LYS LYS B . n B 1 41 LYS 41 168 168 LYS LYS B . n B 1 42 THR 42 169 169 THR THR B . n B 1 43 ASN 43 170 170 ASN ASN B . n B 1 44 GLN 44 171 171 GLN GLN B . n B 1 45 SER 45 172 172 SER SER B . n B 1 46 CYS 46 173 173 CYS CYS B . n B 1 47 GLU 47 174 174 GLU GLU B . n B 1 48 LEU 48 175 175 LEU LEU B . n B 1 49 VAL 49 176 176 VAL VAL B . n B 1 50 ILE 50 177 177 ILE ILE B . n B 1 51 ASP 51 178 178 ASP ASP B . n B 1 52 SER 52 179 179 SER SER B . n B 1 53 THR 53 180 180 THR THR B . n B 1 54 GLU 54 181 181 GLU GLU B . n B 1 55 LYS 55 182 182 LYS LYS B . n B 1 56 VAL 56 183 183 VAL VAL B . n B 1 57 ASN 57 184 184 ASN ASN B . n B 1 58 PRO 58 185 185 PRO PRO B . n B 1 59 SER 59 186 186 SER SER B . n B 1 60 TYR 60 187 187 TYR TYR B . n B 1 61 ILE 61 188 188 ILE ILE B . n B 1 62 GLY 62 189 189 GLY GLY B . n B 1 63 ARG 63 190 190 ARG ARG B . n B 1 64 ALA 64 191 191 ALA ALA B . n B 1 65 LYS 65 192 192 LYS LYS B . n B 1 66 LEU 66 193 193 LEU LEU B . n B 1 67 PHE 67 194 194 PHE PHE B . n B 1 68 MET 68 195 195 MET MET B . n B 1 69 LYS 69 196 196 LYS LYS B . n B 1 70 GLY 70 197 197 GLY GLY B . n B 1 71 THR 71 198 198 THR THR B . n B 1 72 ASP 72 199 199 ASP ASP B . n B 1 73 LEU 73 200 200 LEU LEU B . n B 1 74 THR 74 201 201 THR THR B . n B 1 75 VAL 75 202 202 VAL VAL B . n B 1 76 PHE 76 203 203 PHE PHE B . n B 1 77 TYR 77 204 204 TYR TYR B . n B 1 78 VAL 78 205 205 VAL VAL B . n B 1 79 ASN 79 206 206 ASN ASN B . n B 1 80 ILE 80 207 207 ILE ILE B . n B 1 81 SER 81 208 208 SER SER B . n B 1 82 HIS 82 209 209 HIS HIS B . n B 1 83 LEU 83 210 210 LEU LEU B . n B 1 84 THR 84 211 211 THR THR B . n B 1 85 HIS 85 212 212 HIS HIS B . n B 1 86 ASN 86 213 213 ASN ASN B . n B 1 87 ASP 87 214 214 ASP ASP B . n B 1 88 ALA 88 215 215 ALA ALA B . n B 1 89 GLY 89 216 216 GLY GLY B . n B 1 90 LEU 90 217 217 LEU LEU B . n B 1 91 TYR 91 218 218 TYR TYR B . n B 1 92 ILE 92 219 219 ILE ILE B . n B 1 93 CYS 93 220 220 CYS CYS B . n B 1 94 GLN 94 221 221 GLN GLN B . n B 1 95 ALA 95 222 222 ALA ALA B . n B 1 96 GLY 96 223 223 GLY GLY B . n B 1 97 GLU 97 224 224 GLU GLU B . n B 1 98 GLY 98 225 225 GLY GLY B . n B 1 99 PRO 99 226 226 PRO PRO B . n B 1 100 SER 100 227 227 SER SER B . n B 1 101 ALA 101 228 228 ALA ALA B . n B 1 102 ASP 102 229 229 ASP ASP B . n B 1 103 LYS 103 230 230 LYS LYS B . n B 1 104 LYS 104 231 231 LYS LYS B . n B 1 105 ASN 105 232 232 ASN ASN B . n B 1 106 VAL 106 233 233 VAL VAL B . n B 1 107 ASP 107 234 234 ASP ASP B . n B 1 108 LEU 108 235 235 LEU LEU B . n B 1 109 GLN 109 236 236 GLN GLN B . n B 1 110 VAL 110 237 237 VAL VAL B . n B 1 111 LEU 111 238 238 LEU LEU B . n B 1 112 ALA 112 239 239 ALA ALA B . n B 1 113 PRO 113 240 240 PRO PRO B . n B 1 114 GLU 114 241 241 GLU GLU B . n B 1 115 PRO 115 242 ? ? ? B . n B 1 116 GLU 116 243 ? ? ? B . n B 1 117 LEU 117 244 ? ? ? B . n B 1 118 LEU 118 245 ? ? ? B . n B 1 119 ALA 119 246 ? ? ? B . n B 1 120 GLU 120 247 ? ? ? B . n B 1 121 ASN 121 248 ? ? ? B . n B 1 122 LEU 122 249 ? ? ? B . n B 1 123 TYR 123 250 ? ? ? B . n B 1 124 PHE 124 251 ? ? ? B . n B 1 125 GLN 125 252 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG 1 301 301 NAG NAG A . D 2 NAG 1 301 301 NAG NAG B . E 3 GOL 1 302 1 GOL GOL B . F 4 HOH 1 401 3 HOH HOH A . F 4 HOH 2 402 6 HOH HOH A . F 4 HOH 3 403 7 HOH HOH A . F 4 HOH 4 404 11 HOH HOH A . F 4 HOH 5 405 12 HOH HOH A . F 4 HOH 6 406 15 HOH HOH A . F 4 HOH 7 407 16 HOH HOH A . F 4 HOH 8 408 17 HOH HOH A . F 4 HOH 9 409 18 HOH HOH A . F 4 HOH 10 410 20 HOH HOH A . F 4 HOH 11 411 21 HOH HOH A . F 4 HOH 12 412 22 HOH HOH A . F 4 HOH 13 413 25 HOH HOH A . F 4 HOH 14 414 28 HOH HOH A . F 4 HOH 15 415 29 HOH HOH A . F 4 HOH 16 416 30 HOH HOH A . F 4 HOH 17 417 31 HOH HOH A . F 4 HOH 18 418 32 HOH HOH A . F 4 HOH 19 419 35 HOH HOH A . F 4 HOH 20 420 37 HOH HOH A . F 4 HOH 21 421 38 HOH HOH A . F 4 HOH 22 422 41 HOH HOH A . F 4 HOH 23 423 42 HOH HOH A . F 4 HOH 24 424 45 HOH HOH A . F 4 HOH 25 425 47 HOH HOH A . F 4 HOH 26 426 49 HOH HOH A . F 4 HOH 27 427 50 HOH HOH A . F 4 HOH 28 428 51 HOH HOH A . F 4 HOH 29 429 53 HOH HOH A . F 4 HOH 30 430 54 HOH HOH A . F 4 HOH 31 431 56 HOH HOH A . F 4 HOH 32 432 59 HOH HOH A . F 4 HOH 33 433 61 HOH HOH A . F 4 HOH 34 434 62 HOH HOH A . F 4 HOH 35 435 69 HOH HOH A . F 4 HOH 36 436 73 HOH HOH A . F 4 HOH 37 437 76 HOH HOH A . F 4 HOH 38 438 77 HOH HOH A . F 4 HOH 39 439 81 HOH HOH A . F 4 HOH 40 440 83 HOH HOH A . F 4 HOH 41 441 86 HOH HOH A . F 4 HOH 42 442 89 HOH HOH A . F 4 HOH 43 443 90 HOH HOH A . F 4 HOH 44 444 99 HOH HOH A . F 4 HOH 45 445 100 HOH HOH A . F 4 HOH 46 446 101 HOH HOH A . F 4 HOH 47 447 102 HOH HOH A . F 4 HOH 48 448 104 HOH HOH A . F 4 HOH 49 449 108 HOH HOH A . F 4 HOH 50 450 109 HOH HOH A . F 4 HOH 51 451 110 HOH HOH A . F 4 HOH 52 452 111 HOH HOH A . F 4 HOH 53 453 113 HOH HOH A . F 4 HOH 54 454 114 HOH HOH A . F 4 HOH 55 455 115 HOH HOH A . F 4 HOH 56 456 116 HOH HOH A . F 4 HOH 57 457 117 HOH HOH A . F 4 HOH 58 458 118 HOH HOH A . F 4 HOH 59 459 119 HOH HOH A . F 4 HOH 60 460 122 HOH HOH A . F 4 HOH 61 461 124 HOH HOH A . F 4 HOH 62 462 125 HOH HOH A . F 4 HOH 63 463 128 HOH HOH A . F 4 HOH 64 464 131 HOH HOH A . F 4 HOH 65 465 132 HOH HOH A . F 4 HOH 66 466 133 HOH HOH A . F 4 HOH 67 467 135 HOH HOH A . F 4 HOH 68 468 137 HOH HOH A . F 4 HOH 69 469 138 HOH HOH A . F 4 HOH 70 470 143 HOH HOH A . F 4 HOH 71 471 144 HOH HOH A . F 4 HOH 72 472 146 HOH HOH A . G 4 HOH 1 401 1 HOH HOH B . G 4 HOH 2 402 2 HOH HOH B . G 4 HOH 3 403 4 HOH HOH B . G 4 HOH 4 404 5 HOH HOH B . G 4 HOH 5 405 8 HOH HOH B . G 4 HOH 6 406 9 HOH HOH B . G 4 HOH 7 407 10 HOH HOH B . G 4 HOH 8 408 13 HOH HOH B . G 4 HOH 9 409 14 HOH HOH B . G 4 HOH 10 410 19 HOH HOH B . G 4 HOH 11 411 23 HOH HOH B . G 4 HOH 12 412 24 HOH HOH B . G 4 HOH 13 413 26 HOH HOH B . G 4 HOH 14 414 27 HOH HOH B . G 4 HOH 15 415 33 HOH HOH B . G 4 HOH 16 416 34 HOH HOH B . G 4 HOH 17 417 36 HOH HOH B . G 4 HOH 18 418 39 HOH HOH B . G 4 HOH 19 419 40 HOH HOH B . G 4 HOH 20 420 43 HOH HOH B . G 4 HOH 21 421 44 HOH HOH B . G 4 HOH 22 422 46 HOH HOH B . G 4 HOH 23 423 48 HOH HOH B . G 4 HOH 24 424 52 HOH HOH B . G 4 HOH 25 425 55 HOH HOH B . G 4 HOH 26 426 57 HOH HOH B . G 4 HOH 27 427 58 HOH HOH B . G 4 HOH 28 428 60 HOH HOH B . G 4 HOH 29 429 63 HOH HOH B . G 4 HOH 30 430 64 HOH HOH B . G 4 HOH 31 431 65 HOH HOH B . G 4 HOH 32 432 66 HOH HOH B . G 4 HOH 33 433 67 HOH HOH B . G 4 HOH 34 434 68 HOH HOH B . G 4 HOH 35 435 70 HOH HOH B . G 4 HOH 36 436 71 HOH HOH B . G 4 HOH 37 437 72 HOH HOH B . G 4 HOH 38 438 74 HOH HOH B . G 4 HOH 39 439 75 HOH HOH B . G 4 HOH 40 440 78 HOH HOH B . G 4 HOH 41 441 79 HOH HOH B . G 4 HOH 42 442 80 HOH HOH B . G 4 HOH 43 443 82 HOH HOH B . G 4 HOH 44 444 84 HOH HOH B . G 4 HOH 45 445 85 HOH HOH B . G 4 HOH 46 446 87 HOH HOH B . G 4 HOH 47 447 88 HOH HOH B . G 4 HOH 48 448 91 HOH HOH B . G 4 HOH 49 449 92 HOH HOH B . G 4 HOH 50 450 93 HOH HOH B . G 4 HOH 51 451 94 HOH HOH B . G 4 HOH 52 452 95 HOH HOH B . G 4 HOH 53 453 96 HOH HOH B . G 4 HOH 54 454 97 HOH HOH B . G 4 HOH 55 455 98 HOH HOH B . G 4 HOH 56 456 103 HOH HOH B . G 4 HOH 57 457 105 HOH HOH B . G 4 HOH 58 458 106 HOH HOH B . G 4 HOH 59 459 107 HOH HOH B . G 4 HOH 60 460 112 HOH HOH B . G 4 HOH 61 461 120 HOH HOH B . G 4 HOH 62 462 121 HOH HOH B . G 4 HOH 63 463 123 HOH HOH B . G 4 HOH 64 464 126 HOH HOH B . G 4 HOH 65 465 127 HOH HOH B . G 4 HOH 66 466 129 HOH HOH B . G 4 HOH 67 467 130 HOH HOH B . G 4 HOH 68 468 134 HOH HOH B . G 4 HOH 69 469 136 HOH HOH B . G 4 HOH 70 470 139 HOH HOH B . G 4 HOH 71 471 140 HOH HOH B . G 4 HOH 72 472 141 HOH HOH B . G 4 HOH 73 473 142 HOH HOH B . G 4 HOH 74 474 145 HOH HOH B . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.8.0049 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 CBASS . ? ? ? ? 'data collection' ? ? ? 4 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 5 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # _cell.length_a 101.388 _cell.length_b 35.365 _cell.length_c 73.238 _cell.angle_alpha 90.000 _cell.angle_beta 105.960 _cell.angle_gamma 90.000 _cell.entry_id 4NOF _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 4NOF _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 5 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4NOF _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 3.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details ;Protein (20 mM Hepes, pH 7.5, 150 mM NaCl, 5% glycerol), Reservoir (0.1 M Citric Acid:NaOH pH 3.5, 25% (w/v) PEG 3350), Cryoprotection (30% Glycerol), Vapor Diffusion, Sitting Drop, temperature 298K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-09-27 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0750 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_wavelength_list 1.0750 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A # _reflns.entry_id 4NOF _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.65 _reflns.d_resolution_low 50.00 _reflns.number_all 30181 _reflns.number_obs 30181 _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.3 _reflns.B_iso_Wilson_estimate 21.9 _reflns.pdbx_redundancy 6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.68 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 94.0 _reflns_shell.Rmerge_I_obs 0.702 _reflns_shell.meanI_over_sigI_obs 1.89 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 5.0 _reflns_shell.number_unique_all 1467 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4NOF _refine.ls_d_res_high 1.6500 _refine.ls_d_res_low 50.00 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.6200 _refine.ls_number_reflns_obs 30082 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1810 _refine.ls_R_factor_R_work 0.1800 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1992 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1522 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 27.9053 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.8400 _refine.aniso_B[2][2] 1.1500 _refine.aniso_B[3][3] -1.3400 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.7700 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9630 _refine.correlation_coeff_Fo_to_Fc_free 0.9590 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0910 _refine.pdbx_overall_ESU_R_Free 0.0870 _refine.overall_SU_ML 0.0620 _refine.overall_SU_B 1.8380 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'Poly-alanine model of PDB code 1XED' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 83.830 _refine.B_iso_min 13.930 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1675 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 146 _refine_hist.number_atoms_total 1855 _refine_hist.d_res_high 1.6500 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1790 0.011 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1733 0.003 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2436 1.531 1.997 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4016 0.768 3.004 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 233 6.358 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 73 41.297 25.616 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 324 11.739 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 6 21.406 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 285 0.094 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2005 0.007 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 365 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 884 2.163 2.381 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 883 2.150 2.377 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1106 3.486 3.557 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.6500 _refine_ls_shell.d_res_low 1.6930 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 96.1500 _refine_ls_shell.number_reflns_R_work 2074 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2790 _refine_ls_shell.R_factor_R_free 0.3030 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 124 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2198 _refine_ls_shell.number_reflns_obs 2074 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4NOF _struct.title 'Crystal structure of the second Ig domain from mouse Polymeric Immunoglobulin receptor [PSI-NYSGRC-006220]' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NOF _struct_keywords.text ;Immune system, ortholog, Structural genomics, PSI-Biology, New York Structural Genomics Research Consortium, NYSGRC, IG domain, Polymeric Immunoglobulin Receptor, Immune Function Network, IFN, Atoms-to-Animals: The Immune Function Network ; _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PIGR_MOUSE _struct_ref.pdbx_db_accession O70570 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LPSDTHVYTKDIGRNVTIECPFKRENAPSKKSLCKKTNQSCELVIDSTEKVNPSYIGRAKLFMKGTDLTVFYVNISHLTH NDAGLYICQAGEGPSADKKNVDLQVLAPEPELL ; _struct_ref.pdbx_align_begin 133 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4NOF A 6 ? 118 ? O70570 133 ? 245 ? 133 245 2 1 4NOF B 6 ? 118 ? O70570 133 ? 245 ? 133 245 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NOF GLN A 1 ? UNP O70570 ? ? 'expression tag' 128 1 1 4NOF ASP A 2 ? UNP O70570 ? ? 'expression tag' 129 2 1 4NOF TYR A 3 ? UNP O70570 ? ? 'expression tag' 130 3 1 4NOF GLY A 4 ? UNP O70570 ? ? 'expression tag' 131 4 1 4NOF GLY A 5 ? UNP O70570 ? ? 'expression tag' 132 5 1 4NOF ALA A 119 ? UNP O70570 ? ? 'expression tag' 246 6 1 4NOF GLU A 120 ? UNP O70570 ? ? 'expression tag' 247 7 1 4NOF ASN A 121 ? UNP O70570 ? ? 'expression tag' 248 8 1 4NOF LEU A 122 ? UNP O70570 ? ? 'expression tag' 249 9 1 4NOF TYR A 123 ? UNP O70570 ? ? 'expression tag' 250 10 1 4NOF PHE A 124 ? UNP O70570 ? ? 'expression tag' 251 11 1 4NOF GLN A 125 ? UNP O70570 ? ? 'expression tag' 252 12 2 4NOF GLN B 1 ? UNP O70570 ? ? 'expression tag' 128 13 2 4NOF ASP B 2 ? UNP O70570 ? ? 'expression tag' 129 14 2 4NOF TYR B 3 ? UNP O70570 ? ? 'expression tag' 130 15 2 4NOF GLY B 4 ? UNP O70570 ? ? 'expression tag' 131 16 2 4NOF GLY B 5 ? UNP O70570 ? ? 'expression tag' 132 17 2 4NOF ALA B 119 ? UNP O70570 ? ? 'expression tag' 246 18 2 4NOF GLU B 120 ? UNP O70570 ? ? 'expression tag' 247 19 2 4NOF ASN B 121 ? UNP O70570 ? ? 'expression tag' 248 20 2 4NOF LEU B 122 ? UNP O70570 ? ? 'expression tag' 249 21 2 4NOF TYR B 123 ? UNP O70570 ? ? 'expression tag' 250 22 2 4NOF PHE B 124 ? UNP O70570 ? ? 'expression tag' 251 23 2 4NOF GLN B 125 ? UNP O70570 ? ? 'expression tag' 252 24 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,F 2 1 B,D,E,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 28 ? ALA A 32 ? LYS A 155 ALA A 159 5 ? 5 HELX_P HELX_P2 2 THR A 84 ? ALA A 88 ? THR A 211 ALA A 215 5 ? 5 HELX_P HELX_P3 3 GLU A 97 ? ALA A 101 ? GLU A 224 ALA A 228 5 ? 5 HELX_P HELX_P4 4 LYS B 28 ? ALA B 32 ? LYS B 155 ALA B 159 5 ? 5 HELX_P HELX_P5 5 THR B 84 ? ALA B 88 ? THR B 211 ALA B 215 5 ? 5 HELX_P HELX_P6 6 GLU B 97 ? ALA B 101 ? GLU B 224 ALA B 228 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 93 SG ? ? A CYS 152 A CYS 220 1_555 ? ? ? ? ? ? ? 2.070 ? ? disulf2 disulf ? ? A CYS 39 SG A ? ? 1_555 A CYS 46 SG A ? A CYS 166 A CYS 173 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf3 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 93 SG ? ? B CYS 152 B CYS 220 1_555 ? ? ? ? ? ? ? 2.077 ? ? disulf4 disulf ? ? B CYS 39 SG A ? ? 1_555 B CYS 46 SG A ? B CYS 166 B CYS 173 1_555 ? ? ? ? ? ? ? 2.031 ? ? covale1 covale one ? A ASN 20 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 147 A NAG 301 1_555 ? ? ? ? ? ? ? 1.450 ? N-Glycosylation covale2 covale one ? B ASN 20 ND2 ? ? ? 1_555 D NAG . C1 ? ? B ASN 147 B NAG 301 1_555 ? ? ? ? ? ? ? 1.460 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG C . ? ASN A 20 ? NAG A 301 ? 1_555 ASN A 147 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG D . ? ASN B 20 ? NAG B 301 ? 1_555 ASN B 147 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 CYS A 25 ? CYS A 93 ? CYS A 152 ? 1_555 CYS A 220 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 39 A CYS A 46 A CYS A 166 ? 1_555 CYS A 173 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 25 ? CYS B 93 ? CYS B 152 ? 1_555 CYS B 220 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 39 A CYS B 46 A CYS B 166 ? 1_555 CYS B 173 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? C ? 5 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 11 ? ASP A 16 ? HIS A 138 ASP A 143 A 2 ASP A 102 ? LEU A 111 ? ASP A 229 LEU A 238 A 3 GLY A 89 ? ALA A 95 ? GLY A 216 ALA A 222 A 4 LYS A 36 ? LYS A 41 ? LYS A 163 LYS A 168 A 5 CYS A 46 ? ASP A 51 ? CYS A 173 ASP A 178 B 1 VAL A 21 ? PRO A 26 ? VAL A 148 PRO A 153 B 2 VAL A 75 ? ILE A 80 ? VAL A 202 ILE A 207 B 3 ALA A 64 ? PHE A 67 ? ALA A 191 PHE A 194 C 1 HIS B 11 ? ASP B 16 ? HIS B 138 ASP B 143 C 2 ASP B 102 ? LEU B 111 ? ASP B 229 LEU B 238 C 3 GLY B 89 ? ALA B 95 ? GLY B 216 ALA B 222 C 4 LYS B 36 ? THR B 42 ? LYS B 163 THR B 169 C 5 SER B 45 ? ASP B 51 ? SER B 172 ASP B 178 D 1 VAL B 21 ? PRO B 26 ? VAL B 148 PRO B 153 D 2 VAL B 75 ? ILE B 80 ? VAL B 202 ILE B 207 D 3 ALA B 64 ? PHE B 67 ? ALA B 191 PHE B 194 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 13 ? N TYR A 140 O GLN A 109 ? O GLN A 236 A 2 3 O VAL A 106 ? O VAL A 233 N TYR A 91 ? N TYR A 218 A 3 4 O GLN A 94 ? O GLN A 221 N SER A 37 ? N SER A 164 A 4 5 N LEU A 38 ? N LEU A 165 O VAL A 49 ? O VAL A 176 B 1 2 N CYS A 25 ? N CYS A 152 O PHE A 76 ? O PHE A 203 B 2 3 O TYR A 77 ? O TYR A 204 N PHE A 67 ? N PHE A 194 C 1 2 N TYR B 13 ? N TYR B 140 O GLN B 109 ? O GLN B 236 C 2 3 O LYS B 104 ? O LYS B 231 N CYS B 93 ? N CYS B 220 C 3 4 O GLN B 94 ? O GLN B 221 N SER B 37 ? N SER B 164 C 4 5 N THR B 42 ? N THR B 169 O SER B 45 ? O SER B 172 D 1 2 N ILE B 23 ? N ILE B 150 O VAL B 78 ? O VAL B 205 D 2 3 O TYR B 77 ? O TYR B 204 N PHE B 67 ? N PHE B 194 # _pdbx_entry_details.entry_id 4NOF _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NZ _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 196 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 448 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 178 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 178 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 178 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.94 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.64 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN B 170 ? ? -60.48 97.89 2 1 GLU B 181 ? ? 82.61 7.59 # loop_ _pdbx_SG_project.id _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.initial_of_center 1 PSI:Biology 'New York Structural Genomics Research Consortium' NYSGRC 2 PSI:Biology 'Atoms-to-Animals: The Immune Function Network' IFN # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 20 A ASN 147 ? ASN 'GLYCOSYLATION SITE' 2 B ASN 20 B ASN 147 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 128 ? A GLN 1 2 1 Y 1 A ASP 129 ? A ASP 2 3 1 Y 1 A TYR 130 ? A TYR 3 4 1 Y 1 A PRO 242 ? A PRO 115 5 1 Y 1 A GLU 243 ? A GLU 116 6 1 Y 1 A LEU 244 ? A LEU 117 7 1 Y 1 A LEU 245 ? A LEU 118 8 1 Y 1 A ALA 246 ? A ALA 119 9 1 Y 1 A GLU 247 ? A GLU 120 10 1 Y 1 A ASN 248 ? A ASN 121 11 1 Y 1 A LEU 249 ? A LEU 122 12 1 Y 1 A TYR 250 ? A TYR 123 13 1 Y 1 A PHE 251 ? A PHE 124 14 1 Y 1 A GLN 252 ? A GLN 125 15 1 Y 1 B GLN 128 ? B GLN 1 16 1 Y 1 B ASP 129 ? B ASP 2 17 1 Y 1 B TYR 130 ? B TYR 3 18 1 Y 1 B GLY 131 ? B GLY 4 19 1 Y 1 B GLY 132 ? B GLY 5 20 1 Y 1 B LEU 133 ? B LEU 6 21 1 Y 1 B PRO 134 ? B PRO 7 22 1 Y 1 B SER 135 ? B SER 8 23 1 Y 1 B PRO 242 ? B PRO 115 24 1 Y 1 B GLU 243 ? B GLU 116 25 1 Y 1 B LEU 244 ? B LEU 117 26 1 Y 1 B LEU 245 ? B LEU 118 27 1 Y 1 B ALA 246 ? B ALA 119 28 1 Y 1 B GLU 247 ? B GLU 120 29 1 Y 1 B ASN 248 ? B ASN 121 30 1 Y 1 B LEU 249 ? B LEU 122 31 1 Y 1 B TYR 250 ? B TYR 123 32 1 Y 1 B PHE 251 ? B PHE 124 33 1 Y 1 B GLN 252 ? B GLN 125 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 NAG C1 C N R 264 NAG C2 C N R 265 NAG C3 C N R 266 NAG C4 C N S 267 NAG C5 C N R 268 NAG C6 C N N 269 NAG C7 C N N 270 NAG C8 C N N 271 NAG N2 N N N 272 NAG O1 O N N 273 NAG O3 O N N 274 NAG O4 O N N 275 NAG O5 O N N 276 NAG O6 O N N 277 NAG O7 O N N 278 NAG H1 H N N 279 NAG H2 H N N 280 NAG H3 H N N 281 NAG H4 H N N 282 NAG H5 H N N 283 NAG H61 H N N 284 NAG H62 H N N 285 NAG H81 H N N 286 NAG H82 H N N 287 NAG H83 H N N 288 NAG HN2 H N N 289 NAG HO1 H N N 290 NAG HO3 H N N 291 NAG HO4 H N N 292 NAG HO6 H N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TYR N N N N 365 TYR CA C N S 366 TYR C C N N 367 TYR O O N N 368 TYR CB C N N 369 TYR CG C Y N 370 TYR CD1 C Y N 371 TYR CD2 C Y N 372 TYR CE1 C Y N 373 TYR CE2 C Y N 374 TYR CZ C Y N 375 TYR OH O N N 376 TYR OXT O N N 377 TYR H H N N 378 TYR H2 H N N 379 TYR HA H N N 380 TYR HB2 H N N 381 TYR HB3 H N N 382 TYR HD1 H N N 383 TYR HD2 H N N 384 TYR HE1 H N N 385 TYR HE2 H N N 386 TYR HH H N N 387 TYR HXT H N N 388 VAL N N N N 389 VAL CA C N S 390 VAL C C N N 391 VAL O O N N 392 VAL CB C N N 393 VAL CG1 C N N 394 VAL CG2 C N N 395 VAL OXT O N N 396 VAL H H N N 397 VAL H2 H N N 398 VAL HA H N N 399 VAL HB H N N 400 VAL HG11 H N N 401 VAL HG12 H N N 402 VAL HG13 H N N 403 VAL HG21 H N N 404 VAL HG22 H N N 405 VAL HG23 H N N 406 VAL HXT H N N 407 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 NAG C1 C2 sing N N 250 NAG C1 O1 sing N N 251 NAG C1 O5 sing N N 252 NAG C1 H1 sing N N 253 NAG C2 C3 sing N N 254 NAG C2 N2 sing N N 255 NAG C2 H2 sing N N 256 NAG C3 C4 sing N N 257 NAG C3 O3 sing N N 258 NAG C3 H3 sing N N 259 NAG C4 C5 sing N N 260 NAG C4 O4 sing N N 261 NAG C4 H4 sing N N 262 NAG C5 C6 sing N N 263 NAG C5 O5 sing N N 264 NAG C5 H5 sing N N 265 NAG C6 O6 sing N N 266 NAG C6 H61 sing N N 267 NAG C6 H62 sing N N 268 NAG C7 C8 sing N N 269 NAG C7 N2 sing N N 270 NAG C7 O7 doub N N 271 NAG C8 H81 sing N N 272 NAG C8 H82 sing N N 273 NAG C8 H83 sing N N 274 NAG N2 HN2 sing N N 275 NAG O1 HO1 sing N N 276 NAG O3 HO3 sing N N 277 NAG O4 HO4 sing N N 278 NAG O6 HO6 sing N N 279 PHE N CA sing N N 280 PHE N H sing N N 281 PHE N H2 sing N N 282 PHE CA C sing N N 283 PHE CA CB sing N N 284 PHE CA HA sing N N 285 PHE C O doub N N 286 PHE C OXT sing N N 287 PHE CB CG sing N N 288 PHE CB HB2 sing N N 289 PHE CB HB3 sing N N 290 PHE CG CD1 doub Y N 291 PHE CG CD2 sing Y N 292 PHE CD1 CE1 sing Y N 293 PHE CD1 HD1 sing N N 294 PHE CD2 CE2 doub Y N 295 PHE CD2 HD2 sing N N 296 PHE CE1 CZ doub Y N 297 PHE CE1 HE1 sing N N 298 PHE CE2 CZ sing Y N 299 PHE CE2 HE2 sing N N 300 PHE CZ HZ sing N N 301 PHE OXT HXT sing N N 302 PRO N CA sing N N 303 PRO N CD sing N N 304 PRO N H sing N N 305 PRO CA C sing N N 306 PRO CA CB sing N N 307 PRO CA HA sing N N 308 PRO C O doub N N 309 PRO C OXT sing N N 310 PRO CB CG sing N N 311 PRO CB HB2 sing N N 312 PRO CB HB3 sing N N 313 PRO CG CD sing N N 314 PRO CG HG2 sing N N 315 PRO CG HG3 sing N N 316 PRO CD HD2 sing N N 317 PRO CD HD3 sing N N 318 PRO OXT HXT sing N N 319 SER N CA sing N N 320 SER N H sing N N 321 SER N H2 sing N N 322 SER CA C sing N N 323 SER CA CB sing N N 324 SER CA HA sing N N 325 SER C O doub N N 326 SER C OXT sing N N 327 SER CB OG sing N N 328 SER CB HB2 sing N N 329 SER CB HB3 sing N N 330 SER OG HG sing N N 331 SER OXT HXT sing N N 332 THR N CA sing N N 333 THR N H sing N N 334 THR N H2 sing N N 335 THR CA C sing N N 336 THR CA CB sing N N 337 THR CA HA sing N N 338 THR C O doub N N 339 THR C OXT sing N N 340 THR CB OG1 sing N N 341 THR CB CG2 sing N N 342 THR CB HB sing N N 343 THR OG1 HG1 sing N N 344 THR CG2 HG21 sing N N 345 THR CG2 HG22 sing N N 346 THR CG2 HG23 sing N N 347 THR OXT HXT sing N N 348 TYR N CA sing N N 349 TYR N H sing N N 350 TYR N H2 sing N N 351 TYR CA C sing N N 352 TYR CA CB sing N N 353 TYR CA HA sing N N 354 TYR C O doub N N 355 TYR C OXT sing N N 356 TYR CB CG sing N N 357 TYR CB HB2 sing N N 358 TYR CB HB3 sing N N 359 TYR CG CD1 doub Y N 360 TYR CG CD2 sing Y N 361 TYR CD1 CE1 sing Y N 362 TYR CD1 HD1 sing N N 363 TYR CD2 CE2 doub Y N 364 TYR CD2 HD2 sing N N 365 TYR CE1 CZ doub Y N 366 TYR CE1 HE1 sing N N 367 TYR CE2 CZ sing Y N 368 TYR CE2 HE2 sing N N 369 TYR CZ OH sing N N 370 TYR OH HH sing N N 371 TYR OXT HXT sing N N 372 VAL N CA sing N N 373 VAL N H sing N N 374 VAL N H2 sing N N 375 VAL CA C sing N N 376 VAL CA CB sing N N 377 VAL CA HA sing N N 378 VAL C O doub N N 379 VAL C OXT sing N N 380 VAL CB CG1 sing N N 381 VAL CB CG2 sing N N 382 VAL CB HB sing N N 383 VAL CG1 HG11 sing N N 384 VAL CG1 HG12 sing N N 385 VAL CG1 HG13 sing N N 386 VAL CG2 HG21 sing N N 387 VAL CG2 HG22 sing N N 388 VAL CG2 HG23 sing N N 389 VAL OXT HXT sing N N 390 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1XED _pdbx_initial_refinement_model.details 'Poly-alanine model of PDB code 1XED' # _atom_sites.entry_id 4NOF _atom_sites.fract_transf_matrix[1][1] 0.009863 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002821 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028277 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014201 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_