HEADER PROTEIN BINDING 20-NOV-13 4NOZ TITLE CRYSTAL STRUCTURE OF AN ORGANIC HYDROPEROXIDE RESISTANCE PROTEIN FROM TITLE 2 BURKHOLDERIA CENOCEPACIA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORGANIC HYDROPEROXIDE RESISTANCE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CENOCEPACIA; SOURCE 3 ORGANISM_TAXID: 216591; SOURCE 4 STRAIN: ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / SOURCE 5 CF5610; SOURCE 6 GENE: OHR, BCEJ2315_63600, BCAS0085; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, SSGCID, OSMC-LIKE PROTEIN, ORGANIC HYDROPEROXIDE KEYWDS 4 RESISTANCE, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR D.M.DRANOW,C.M.LUKACS,T.E.EDWARDS,D.LORIMER,SEATTLE STRUCTURAL AUTHOR 2 GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 20-SEP-23 4NOZ 1 REMARK SEQADV REVDAT 3 22-NOV-17 4NOZ 1 REMARK REVDAT 2 11-DEC-13 4NOZ 1 REMARK REVDAT 1 04-DEC-13 4NOZ 0 JRNL AUTH D.M.DRANOW,C.M.LUKACS,T.E.EDWARDS,D.LORIMER JRNL TITL CRYSTAL STRUCTURE OF AN ORGANIC HYDROPEROXIDE RESISTANCE JRNL TITL 2 PROTEIN FROM BURKHOLDERIA CENOCEPACIA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 85.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 24096 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1226 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1649 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.1900 REMARK 3 BIN FREE R VALUE SET COUNT : 103 REMARK 3 BIN FREE R VALUE : 0.2450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2092 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 237 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : -0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.142 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.088 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.568 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2167 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2132 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2929 ; 1.481 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4886 ; 0.719 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 292 ; 5.585 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;34.242 ;23.086 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 332 ;11.904 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;15.705 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 338 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2484 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 468 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1162 ; 1.219 ; 1.795 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1161 ; 1.206 ; 1.793 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1450 ; 1.967 ; 2.681 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 32 REMARK 3 ORIGIN FOR THE GROUP (A): 46.4450 19.6498 12.1151 REMARK 3 T TENSOR REMARK 3 T11: 0.0829 T22: 0.1481 REMARK 3 T33: 0.1115 T12: 0.0189 REMARK 3 T13: 0.0320 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 1.9629 L22: 4.1953 REMARK 3 L33: 1.2635 L12: -0.4779 REMARK 3 L13: -0.7846 L23: 1.2282 REMARK 3 S TENSOR REMARK 3 S11: 0.0458 S12: 0.3287 S13: 0.0185 REMARK 3 S21: -0.2983 S22: -0.0380 S23: -0.2097 REMARK 3 S31: -0.0555 S32: -0.0040 S33: -0.0079 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 33 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): 39.6385 14.8056 24.5566 REMARK 3 T TENSOR REMARK 3 T11: 0.0802 T22: 0.0944 REMARK 3 T33: 0.1530 T12: 0.0349 REMARK 3 T13: -0.0124 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.8573 L22: 2.8020 REMARK 3 L33: 2.0593 L12: 0.7836 REMARK 3 L13: 0.4252 L23: 1.8787 REMARK 3 S TENSOR REMARK 3 S11: -0.0053 S12: -0.0380 S13: -0.0810 REMARK 3 S21: -0.0337 S22: 0.0855 S23: -0.1781 REMARK 3 S31: 0.0181 S32: 0.0905 S33: -0.0802 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 75 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 34.6290 15.8972 32.0792 REMARK 3 T TENSOR REMARK 3 T11: 0.0632 T22: 0.0896 REMARK 3 T33: 0.1091 T12: 0.0521 REMARK 3 T13: -0.0006 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 2.7008 L22: 1.4975 REMARK 3 L33: 5.5994 L12: 0.7994 REMARK 3 L13: 2.9152 L23: 1.2528 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: -0.1416 S13: -0.2545 REMARK 3 S21: 0.1478 S22: 0.0436 S23: -0.0289 REMARK 3 S31: 0.2172 S32: -0.0872 S33: -0.0773 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 141 REMARK 3 ORIGIN FOR THE GROUP (A): 33.4825 23.6553 31.3156 REMARK 3 T TENSOR REMARK 3 T11: 0.0759 T22: 0.0958 REMARK 3 T33: 0.1252 T12: 0.0281 REMARK 3 T13: -0.0121 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.4634 L22: 1.1635 REMARK 3 L33: 2.0518 L12: -0.1465 REMARK 3 L13: 0.3647 L23: 0.3199 REMARK 3 S TENSOR REMARK 3 S11: 0.0039 S12: -0.0821 S13: 0.0061 REMARK 3 S21: 0.0151 S22: 0.0200 S23: -0.0566 REMARK 3 S31: -0.0031 S32: -0.0095 S33: -0.0239 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -6 B 34 REMARK 3 ORIGIN FOR THE GROUP (A): 35.7838 13.2373 24.9468 REMARK 3 T TENSOR REMARK 3 T11: 0.0519 T22: 0.0415 REMARK 3 T33: 0.0800 T12: 0.0175 REMARK 3 T13: -0.0032 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.9535 L22: 1.6700 REMARK 3 L33: 0.9511 L12: -0.4458 REMARK 3 L13: 0.0951 L23: 0.0891 REMARK 3 S TENSOR REMARK 3 S11: -0.0455 S12: -0.0371 S13: -0.2762 REMARK 3 S21: 0.0219 S22: 0.0695 S23: -0.0504 REMARK 3 S31: -0.0068 S32: 0.0139 S33: -0.0240 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 35 B 75 REMARK 3 ORIGIN FOR THE GROUP (A): 40.3260 17.1403 12.2307 REMARK 3 T TENSOR REMARK 3 T11: 0.1377 T22: 0.1773 REMARK 3 T33: 0.1455 T12: 0.0368 REMARK 3 T13: 0.0046 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 4.2547 L22: 0.9202 REMARK 3 L33: 2.6856 L12: 1.4392 REMARK 3 L13: 2.2693 L23: 1.1559 REMARK 3 S TENSOR REMARK 3 S11: 0.1184 S12: 0.2247 S13: -0.1681 REMARK 3 S21: -0.1392 S22: -0.0599 S23: -0.1803 REMARK 3 S31: 0.0169 S32: -0.1419 S33: -0.0585 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 76 B 111 REMARK 3 ORIGIN FOR THE GROUP (A): 39.4364 22.5954 6.8247 REMARK 3 T TENSOR REMARK 3 T11: 0.1174 T22: 0.2323 REMARK 3 T33: 0.0929 T12: 0.0327 REMARK 3 T13: 0.0428 T23: 0.0418 REMARK 3 L TENSOR REMARK 3 L11: 1.3364 L22: 2.6426 REMARK 3 L33: 6.8894 L12: 0.3611 REMARK 3 L13: 0.3179 L23: 3.5031 REMARK 3 S TENSOR REMARK 3 S11: 0.0716 S12: 0.4519 S13: 0.0940 REMARK 3 S21: -0.2083 S22: 0.0275 S23: -0.1839 REMARK 3 S31: -0.0544 S32: 0.0130 S33: -0.0991 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 112 B 141 REMARK 3 ORIGIN FOR THE GROUP (A): 31.0955 21.7529 7.0782 REMARK 3 T TENSOR REMARK 3 T11: 0.1513 T22: 0.2473 REMARK 3 T33: 0.0790 T12: 0.0525 REMARK 3 T13: -0.0464 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 3.2735 L22: 1.7428 REMARK 3 L33: 1.5509 L12: -0.0399 REMARK 3 L13: -0.7026 L23: 0.9062 REMARK 3 S TENSOR REMARK 3 S11: 0.1415 S12: 0.6056 S13: 0.0784 REMARK 3 S21: -0.2752 S22: -0.0531 S23: 0.0099 REMARK 3 S31: -0.1675 S32: -0.2597 S33: -0.0884 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NOZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083475. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24096 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 99.611 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.6700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.46600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.5 REMARK 200 STARTING MODEL: PDB ENTRY 1ZB8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MCSG1(D2): 0.2M NACL, 0.1M BIS REMARK 280 -TRIS:HCL, PH=6.5, 25% PEG-3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K, PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.59500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.59500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.59500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.59500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.59500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.59500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.59500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.59500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 418 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 MET B -7 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 0 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 18 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 ARG B 18 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 73 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 9 O1 EDO A 302 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 374 O HOH B 374 7556 1.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 9 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 41.76 -100.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-BUCEA.00074.D RELATED DB: TARGETTRACK DBREF 4NOZ A 1 141 UNP B4EPK2 B4EPK2_BURCJ 1 141 DBREF 4NOZ B 1 141 UNP B4EPK2 B4EPK2_BURCJ 1 141 SEQADV 4NOZ MET A -7 UNP B4EPK2 INITIATING METHIONINE SEQADV 4NOZ ALA A -6 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS A -5 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS A -4 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS A -3 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS A -2 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS A -1 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS A 0 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ MET B -7 UNP B4EPK2 INITIATING METHIONINE SEQADV 4NOZ ALA B -6 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS B -5 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS B -4 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS B -3 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS B -2 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS B -1 UNP B4EPK2 EXPRESSION TAG SEQADV 4NOZ HIS B 0 UNP B4EPK2 EXPRESSION TAG SEQRES 1 A 149 MET ALA HIS HIS HIS HIS HIS HIS MET SER ILE GLU LYS SEQRES 2 A 149 VAL LEU TYR ARG ALA HIS ALA LYS ALA THR GLY GLY ARG SEQRES 3 A 149 ASP GLY ARG ALA THR VAL PRO GLU SER GLY LEU ASP LEU SEQRES 4 A 149 LYS LEU THR THR PRO ARG GLU LEU GLY GLY ALA GLY GLY SEQRES 5 A 149 ALA GLY ALA ASN PRO GLU GLN LEU PHE ALA ALA GLY TYR SEQRES 6 A 149 SER ALA CYS PHE ILE GLY ALA MET LYS PHE VAL ALA ALA SEQRES 7 A 149 ARG ASP LYS ILE ALA ILE PRO ALA ASP ALA ALA ILE GLU SEQRES 8 A 149 GLY SER VAL GLY ILE GLY ALA ILE PRO ASN GLY PHE GLY SEQRES 9 A 149 ILE GLU VAL GLU LEU LYS ILE SER LEU PRO GLY LEU ASP SEQRES 10 A 149 ARG ASP ILE ALA GLN THR LEU ILE ASP ARG ALA HIS VAL SEQRES 11 A 149 VAL CYS PRO TYR SER ASN ALA THR ARG GLY ASN ILE ASP SEQRES 12 A 149 VAL THR LEU THR LEU VAL SEQRES 1 B 149 MET ALA HIS HIS HIS HIS HIS HIS MET SER ILE GLU LYS SEQRES 2 B 149 VAL LEU TYR ARG ALA HIS ALA LYS ALA THR GLY GLY ARG SEQRES 3 B 149 ASP GLY ARG ALA THR VAL PRO GLU SER GLY LEU ASP LEU SEQRES 4 B 149 LYS LEU THR THR PRO ARG GLU LEU GLY GLY ALA GLY GLY SEQRES 5 B 149 ALA GLY ALA ASN PRO GLU GLN LEU PHE ALA ALA GLY TYR SEQRES 6 B 149 SER ALA CYS PHE ILE GLY ALA MET LYS PHE VAL ALA ALA SEQRES 7 B 149 ARG ASP LYS ILE ALA ILE PRO ALA ASP ALA ALA ILE GLU SEQRES 8 B 149 GLY SER VAL GLY ILE GLY ALA ILE PRO ASN GLY PHE GLY SEQRES 9 B 149 ILE GLU VAL GLU LEU LYS ILE SER LEU PRO GLY LEU ASP SEQRES 10 B 149 ARG ASP ILE ALA GLN THR LEU ILE ASP ARG ALA HIS VAL SEQRES 11 B 149 VAL CYS PRO TYR SER ASN ALA THR ARG GLY ASN ILE ASP SEQRES 12 B 149 VAL THR LEU THR LEU VAL HET EDO A 301 4 HET EDO A 302 4 HET EDO A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET EDO A 306 4 HET EDO B 201 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 7(C2 H6 O2) FORMUL 10 HOH *237(H2 O) HELIX 1 1 PRO A 36 GLY A 40 5 5 HELIX 2 2 ASN A 48 LYS A 73 1 26 HELIX 3 3 ASP A 109 CYS A 124 1 16 HELIX 4 4 CYS A 124 ARG A 131 1 8 HELIX 5 5 PRO B 36 GLY B 40 5 5 HELIX 6 6 ASN B 48 LYS B 73 1 26 HELIX 7 7 ASP B 109 CYS B 124 1 16 HELIX 8 8 CYS B 124 ARG B 131 1 8 SHEET 1 A 6 ASP A 30 LYS A 32 0 SHEET 2 A 6 ARG A 21 THR A 23 -1 N ALA A 22 O LEU A 31 SHEET 3 A 6 VAL A 6 THR A 15 -1 N LYS A 13 O THR A 23 SHEET 4 A 6 ALA B 81 ILE B 91 -1 O GLY B 84 N ALA A 12 SHEET 5 A 6 GLY B 94 SER B 104 -1 O SER B 104 N ALA B 81 SHEET 6 A 6 VAL B 136 LEU B 140 1 O THR B 139 N LEU B 101 SHEET 1 B 6 VAL A 136 LEU A 140 0 SHEET 2 B 6 GLY A 94 SER A 104 1 N ILE A 103 O THR A 139 SHEET 3 B 6 ALA A 81 ILE A 91 -1 N ALA A 81 O SER A 104 SHEET 4 B 6 VAL B 6 THR B 15 -1 O ALA B 12 N GLY A 84 SHEET 5 B 6 ARG B 21 VAL B 24 -1 O THR B 23 N LYS B 13 SHEET 6 B 6 LEU B 29 LYS B 32 -1 O LEU B 31 N ALA B 22 SITE 1 AC1 6 LEU A 31 ALA A 47 HOH A 508 SER B 27 SITE 2 AC1 6 LEU B 29 HOH B 393 SITE 1 AC2 3 VAL A 6 ARG A 9 HOH A 408 SITE 1 AC3 1 HOH A 512 SITE 1 AC4 3 ASP A 72 ARG A 119 HOH A 436 SITE 1 AC5 3 HOH A 443 HOH A 466 HOH A 507 SITE 1 AC6 6 ILE A 91 PRO A 92 HOH A 448 MET B 1 SITE 2 AC6 6 ASN B 128 HOH B 372 SITE 1 AC7 6 ASP A 118 ARG A 131 PRO B 92 ASN B 93 SITE 2 AC7 6 HOH B 354 HOH B 424 CRYST1 121.190 121.190 64.140 90.00 90.00 90.00 P 4 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008252 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008252 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015591 0.00000