data_4NPB # _entry.id 4NPB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4NPB RCSB RCSB083486 WWPDB D_1000083486 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id CSGID-IDP02103 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4NPB _pdbx_database_status.recvd_initial_deposition_date 2013-11-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tan, K.' 1 'Zhou, M.' 2 'Kwon, K.' 3 'Anderson, W.F.' 4 'Joachimiak, A.' 5 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 # _citation.id primary _citation.title 'The crystal structure of thiol:disulfide interchange protein DsbC from Yersinia pestis CO92' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tan, K.' 1 ? primary 'Zhou, M.' 2 ? primary 'Kwon, K.' 3 ? primary 'Anderson, W.F.' 4 ? primary 'Joachimiak, A.' 5 ? # _cell.entry_id 4NPB _cell.length_a 90.894 _cell.length_b 141.335 _cell.length_c 41.153 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NPB _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein disulfide isomerase II' 24515.713 2 ? ? ? ? 2 branched man 'beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose' 342.297 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 4 water nat water 18.015 62 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Thiol:disulfide interchange protein (DsbC)' 2 sucrose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNADDSAIQQTLKKLDIQQADIQPSPIPGISTV(MSE)TESGVLYISADGKHLLQGPLYDVSGDQPINVTNQALLKKLEA LSSE(MSE)IVYKAPEEKHVITVFTDITCGYCRKLHEQ(MSE)KDYNALGITVRYLAFPRQGLSSQAEKD(MSE)RSIWC (MSE)ADRNKAFDDA(MSE)KNNDISPATCKTDISKHYQLGVQFGIQGTPAIVLQNGTIVPGYQGPKE(MSE)LQ(MSE) LNAHQASLKAGG ; _entity_poly.pdbx_seq_one_letter_code_can ;SNADDSAIQQTLKKLDIQQADIQPSPIPGISTVMTESGVLYISADGKHLLQGPLYDVSGDQPINVTNQALLKKLEALSSE MIVYKAPEEKHVITVFTDITCGYCRKLHEQMKDYNALGITVRYLAFPRQGLSSQAEKDMRSIWCMADRNKAFDDAMKNND ISPATCKTDISKHYQLGVQFGIQGTPAIVLQNGTIVPGYQGPKEMLQMLNAHQASLKAGG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier CSGID-IDP02103 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 ASP n 1 5 ASP n 1 6 SER n 1 7 ALA n 1 8 ILE n 1 9 GLN n 1 10 GLN n 1 11 THR n 1 12 LEU n 1 13 LYS n 1 14 LYS n 1 15 LEU n 1 16 ASP n 1 17 ILE n 1 18 GLN n 1 19 GLN n 1 20 ALA n 1 21 ASP n 1 22 ILE n 1 23 GLN n 1 24 PRO n 1 25 SER n 1 26 PRO n 1 27 ILE n 1 28 PRO n 1 29 GLY n 1 30 ILE n 1 31 SER n 1 32 THR n 1 33 VAL n 1 34 MSE n 1 35 THR n 1 36 GLU n 1 37 SER n 1 38 GLY n 1 39 VAL n 1 40 LEU n 1 41 TYR n 1 42 ILE n 1 43 SER n 1 44 ALA n 1 45 ASP n 1 46 GLY n 1 47 LYS n 1 48 HIS n 1 49 LEU n 1 50 LEU n 1 51 GLN n 1 52 GLY n 1 53 PRO n 1 54 LEU n 1 55 TYR n 1 56 ASP n 1 57 VAL n 1 58 SER n 1 59 GLY n 1 60 ASP n 1 61 GLN n 1 62 PRO n 1 63 ILE n 1 64 ASN n 1 65 VAL n 1 66 THR n 1 67 ASN n 1 68 GLN n 1 69 ALA n 1 70 LEU n 1 71 LEU n 1 72 LYS n 1 73 LYS n 1 74 LEU n 1 75 GLU n 1 76 ALA n 1 77 LEU n 1 78 SER n 1 79 SER n 1 80 GLU n 1 81 MSE n 1 82 ILE n 1 83 VAL n 1 84 TYR n 1 85 LYS n 1 86 ALA n 1 87 PRO n 1 88 GLU n 1 89 GLU n 1 90 LYS n 1 91 HIS n 1 92 VAL n 1 93 ILE n 1 94 THR n 1 95 VAL n 1 96 PHE n 1 97 THR n 1 98 ASP n 1 99 ILE n 1 100 THR n 1 101 CYS n 1 102 GLY n 1 103 TYR n 1 104 CYS n 1 105 ARG n 1 106 LYS n 1 107 LEU n 1 108 HIS n 1 109 GLU n 1 110 GLN n 1 111 MSE n 1 112 LYS n 1 113 ASP n 1 114 TYR n 1 115 ASN n 1 116 ALA n 1 117 LEU n 1 118 GLY n 1 119 ILE n 1 120 THR n 1 121 VAL n 1 122 ARG n 1 123 TYR n 1 124 LEU n 1 125 ALA n 1 126 PHE n 1 127 PRO n 1 128 ARG n 1 129 GLN n 1 130 GLY n 1 131 LEU n 1 132 SER n 1 133 SER n 1 134 GLN n 1 135 ALA n 1 136 GLU n 1 137 LYS n 1 138 ASP n 1 139 MSE n 1 140 ARG n 1 141 SER n 1 142 ILE n 1 143 TRP n 1 144 CYS n 1 145 MSE n 1 146 ALA n 1 147 ASP n 1 148 ARG n 1 149 ASN n 1 150 LYS n 1 151 ALA n 1 152 PHE n 1 153 ASP n 1 154 ASP n 1 155 ALA n 1 156 MSE n 1 157 LYS n 1 158 ASN n 1 159 ASN n 1 160 ASP n 1 161 ILE n 1 162 SER n 1 163 PRO n 1 164 ALA n 1 165 THR n 1 166 CYS n 1 167 LYS n 1 168 THR n 1 169 ASP n 1 170 ILE n 1 171 SER n 1 172 LYS n 1 173 HIS n 1 174 TYR n 1 175 GLN n 1 176 LEU n 1 177 GLY n 1 178 VAL n 1 179 GLN n 1 180 PHE n 1 181 GLY n 1 182 ILE n 1 183 GLN n 1 184 GLY n 1 185 THR n 1 186 PRO n 1 187 ALA n 1 188 ILE n 1 189 VAL n 1 190 LEU n 1 191 GLN n 1 192 ASN n 1 193 GLY n 1 194 THR n 1 195 ILE n 1 196 VAL n 1 197 PRO n 1 198 GLY n 1 199 TYR n 1 200 GLN n 1 201 GLY n 1 202 PRO n 1 203 LYS n 1 204 GLU n 1 205 MSE n 1 206 LEU n 1 207 GLN n 1 208 MSE n 1 209 LEU n 1 210 ASN n 1 211 ALA n 1 212 HIS n 1 213 GLN n 1 214 ALA n 1 215 SER n 1 216 LEU n 1 217 LYS n 1 218 ALA n 1 219 GLY n 1 220 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dsbC, y3275, Yersinia pestis, YPO0891, YP_3587' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain CO92 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Yersinia pestis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 214092 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG53 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q7CGT8_YERPE _struct_ref.pdbx_db_accession Q7CGT8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DDSAIQQTLKKLDIQQADIQPSPIPGISTVMTESGVLYISADGKHLLQGPLYDVSGDQPINVTNQALLKKLEALSSEMIV YKAPEEKHVITVFTDITCGYCRKLHEQMKDYNALGITVRYLAFPRQGLSSQAEKDMRSIWCMADRNKAFDDAMKNNDISP ATCKTDISKHYQLGVQFGIQGTPAIVLQNGTIVPGYQGPKEMLQMLNAHQASLKAGG ; _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4NPB A 4 ? 220 ? Q7CGT8 22 ? 238 ? 22 238 2 1 4NPB B 4 ? 220 ? Q7CGT8 22 ? 238 ? 22 238 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NPB SER A 1 ? UNP Q7CGT8 ? ? 'expression tag' 19 1 1 4NPB ASN A 2 ? UNP Q7CGT8 ? ? 'expression tag' 20 2 1 4NPB ALA A 3 ? UNP Q7CGT8 ? ? 'expression tag' 21 3 2 4NPB SER B 1 ? UNP Q7CGT8 ? ? 'expression tag' 19 4 2 4NPB ASN B 2 ? UNP Q7CGT8 ? ? 'expression tag' 20 5 2 4NPB ALA B 3 ? UNP Q7CGT8 ? ? 'expression tag' 21 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FRU 'D-saccharide, beta linking' . beta-D-fructofuranose ? 'C6 H12 O6' 180.156 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose ? 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4NPB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_percent_sol 54.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.056M Sodium Phosphate monobasic monohydrate, 1.344M potassium phosphate dibasic, pH 8.2, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-12-07 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97899 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97899 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4NPB _reflns.observed_criterion_sigma_I -5 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30.1 _reflns.d_resolution_high 2.15 _reflns.number_obs 29556 _reflns.number_all 29556 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs 0.102 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.8 _reflns.B_iso_Wilson_estimate 38.1 _reflns.pdbx_redundancy 5.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.19 _reflns_shell.percent_possible_all 97.8 _reflns_shell.Rmerge_I_obs 0.664 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.57 _reflns_shell.pdbx_redundancy 5.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4NPB _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 29507 _refine.ls_number_reflns_all 29508 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.505 _refine.ls_d_res_high 2.147 _refine.ls_percent_reflns_obs 98.87 _refine.ls_R_factor_obs 0.1940 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1918 _refine.ls_R_factor_R_free 0.2352 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.07 _refine.ls_number_reflns_R_free 1497 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.26 _refine.pdbx_overall_phase_error 27.28 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3271 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 3366 _refine_hist.d_res_high 2.147 _refine_hist.d_res_low 30.505 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 3363 'X-RAY DIFFRACTION' ? f_angle_d 1.068 ? ? 4563 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.563 ? ? 1251 'X-RAY DIFFRACTION' ? f_chiral_restr 0.067 ? ? 528 'X-RAY DIFFRACTION' ? f_plane_restr 0.004 ? ? 588 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.1470 2.2163 2442 0.2789 96.00 0.3408 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.2163 2.2954 2471 0.2548 98.00 0.3130 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.2954 2.3873 2476 0.2481 99.00 0.3335 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.3873 2.4959 2514 0.2242 99.00 0.2888 . . 144 . . . . 'X-RAY DIFFRACTION' . 2.4959 2.6274 2534 0.2312 99.00 0.2897 . . 128 . . . . 'X-RAY DIFFRACTION' . 2.6274 2.7919 2539 0.2297 99.00 0.2899 . . 125 . . . . 'X-RAY DIFFRACTION' . 2.7919 3.0073 2537 0.2373 99.00 0.3070 . . 141 . . . . 'X-RAY DIFFRACTION' . 3.0073 3.3097 2542 0.2253 99.00 0.2610 . . 135 . . . . 'X-RAY DIFFRACTION' . 3.3097 3.7878 2597 0.1831 100.00 0.2439 . . 137 . . . . 'X-RAY DIFFRACTION' . 3.7878 4.7693 2602 0.1442 100.00 0.1669 . . 142 . . . . 'X-RAY DIFFRACTION' . 4.7693 30.5080 2756 0.1597 99.00 0.1770 . . 134 . . . . # _struct.entry_id 4NPB _struct.title 'The crystal structure of thiol:disulfide interchange protein DsbC from Yersinia pestis CO92' _struct.pdbx_descriptor 'Protein disulfide isomerase II' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NPB _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text ;structural genomics, The Center for Structural Genomics of Infectious Diseases, CSGID, NIAID, National Institute of Allergy and Infectious Diseases, ISOMERASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details 'Experimentally unknown. It is predicted that the chains A and B form a dimer.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 5 ? LEU A 15 ? ASP A 23 LEU A 33 1 ? 11 HELX_P HELX_P2 2 VAL A 65 ? LEU A 77 ? VAL A 83 LEU A 95 1 ? 13 HELX_P HELX_P3 3 SER A 78 ? MSE A 81 ? SER A 96 MSE A 99 5 ? 4 HELX_P HELX_P4 4 CYS A 101 ? GLU A 109 ? CYS A 119 GLU A 127 1 ? 9 HELX_P HELX_P5 5 GLN A 110 ? LEU A 117 ? GLN A 128 LEU A 135 1 ? 8 HELX_P HELX_P6 6 SER A 133 ? CYS A 144 ? SER A 151 CYS A 162 1 ? 12 HELX_P HELX_P7 7 ASP A 147 ? LYS A 157 ? ASP A 165 LYS A 175 1 ? 11 HELX_P HELX_P8 8 ILE A 170 ? GLY A 181 ? ILE A 188 GLY A 199 1 ? 12 HELX_P HELX_P9 9 GLY A 201 ? GLN A 213 ? GLY A 219 GLN A 231 1 ? 13 HELX_P HELX_P10 10 ASP B 5 ? LEU B 15 ? ASP B 23 LEU B 33 1 ? 11 HELX_P HELX_P11 11 VAL B 65 ? ALA B 76 ? VAL B 83 ALA B 94 1 ? 12 HELX_P HELX_P12 12 LEU B 77 ? MSE B 81 ? LEU B 95 MSE B 99 5 ? 5 HELX_P HELX_P13 13 CYS B 101 ? GLN B 110 ? CYS B 119 GLN B 128 1 ? 10 HELX_P HELX_P14 14 GLN B 110 ? LEU B 117 ? GLN B 128 LEU B 135 1 ? 8 HELX_P HELX_P15 15 SER B 133 ? MSE B 145 ? SER B 151 MSE B 163 1 ? 13 HELX_P HELX_P16 16 ASP B 147 ? LYS B 157 ? ASP B 165 LYS B 175 1 ? 11 HELX_P HELX_P17 17 ILE B 170 ? GLY B 181 ? ILE B 188 GLY B 199 1 ? 12 HELX_P HELX_P18 18 GLY B 201 ? GLN B 213 ? GLY B 219 GLN B 231 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 144 SG ? ? ? 1_555 A CYS 166 SG ? ? A CYS 162 A CYS 184 1_555 ? ? ? ? ? ? ? 2.057 ? ? disulf2 disulf ? ? B CYS 144 SG ? ? ? 1_555 B CYS 166 SG ? ? B CYS 162 B CYS 184 1_555 ? ? ? ? ? ? ? 2.043 ? ? covale1 covale both ? A VAL 33 C ? ? ? 1_555 A MSE 34 N ? ? A VAL 51 A MSE 52 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale2 covale both ? A MSE 34 C ? ? ? 1_555 A THR 35 N ? ? A MSE 52 A THR 53 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale3 covale both ? A GLU 80 C ? ? ? 1_555 A MSE 81 N ? ? A GLU 98 A MSE 99 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A MSE 81 C ? ? ? 1_555 A ILE 82 N ? ? A MSE 99 A ILE 100 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? A GLN 110 C ? ? ? 1_555 A MSE 111 N ? ? A GLN 128 A MSE 129 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale6 covale both ? A MSE 111 C ? ? ? 1_555 A LYS 112 N ? ? A MSE 129 A LYS 130 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A ASP 138 C ? ? ? 1_555 A MSE 139 N ? ? A ASP 156 A MSE 157 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale8 covale both ? A MSE 139 C ? ? ? 1_555 A ARG 140 N ? ? A MSE 157 A ARG 158 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale9 covale both ? A CYS 144 C ? ? ? 1_555 A MSE 145 N ? ? A CYS 162 A MSE 163 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale10 covale both ? A MSE 145 C ? ? ? 1_555 A ALA 146 N ? ? A MSE 163 A ALA 164 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale11 covale both ? A ALA 155 C ? ? ? 1_555 A MSE 156 N ? ? A ALA 173 A MSE 174 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale12 covale both ? A MSE 156 C ? ? ? 1_555 A LYS 157 N ? ? A MSE 174 A LYS 175 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale13 covale both ? A GLU 204 C ? ? ? 1_555 A MSE 205 N ? ? A GLU 222 A MSE 223 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale14 covale both ? A MSE 205 C ? ? ? 1_555 A LEU 206 N ? ? A MSE 223 A LEU 224 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale15 covale both ? A GLN 207 C ? ? ? 1_555 A MSE 208 N ? ? A GLN 225 A MSE 226 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale16 covale both ? A MSE 208 C ? ? ? 1_555 A LEU 209 N ? ? A MSE 226 A LEU 227 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale17 covale both ? B VAL 33 C ? ? ? 1_555 B MSE 34 N ? ? B VAL 51 B MSE 52 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale18 covale both ? B MSE 34 C ? ? ? 1_555 B THR 35 N ? ? B MSE 52 B THR 53 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale19 covale both ? B GLU 80 C ? ? ? 1_555 B MSE 81 N ? ? B GLU 98 B MSE 99 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale20 covale both ? B MSE 81 C ? ? ? 1_555 B ILE 82 N ? ? B MSE 99 B ILE 100 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale21 covale both ? B GLN 110 C ? ? ? 1_555 B MSE 111 N ? ? B GLN 128 B MSE 129 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale22 covale both ? B MSE 111 C ? ? ? 1_555 B LYS 112 N ? ? B MSE 129 B LYS 130 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale23 covale both ? B ASP 138 C ? ? ? 1_555 B MSE 139 N ? ? B ASP 156 B MSE 157 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale24 covale both ? B MSE 139 C ? ? ? 1_555 B ARG 140 N ? ? B MSE 157 B ARG 158 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale25 covale both ? B CYS 144 C ? ? ? 1_555 B MSE 145 N ? ? B CYS 162 B MSE 163 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale26 covale both ? B MSE 145 C ? ? ? 1_555 B ALA 146 N ? ? B MSE 163 B ALA 164 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale27 covale both ? B ALA 155 C ? ? ? 1_555 B MSE 156 N ? ? B ALA 173 B MSE 174 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale28 covale both ? B MSE 156 C ? ? ? 1_555 B LYS 157 N ? ? B MSE 174 B LYS 175 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale29 covale both ? B GLU 204 C ? ? ? 1_555 B MSE 205 N ? ? B GLU 222 B MSE 223 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale30 covale both ? B MSE 205 C ? ? ? 1_555 B LEU 206 N ? ? B MSE 223 B LEU 224 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale31 covale both ? B GLN 207 C ? ? ? 1_555 B MSE 208 N ? ? B GLN 225 B MSE 226 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale32 covale both ? B MSE 208 C ? ? ? 1_555 B LEU 209 N ? ? B MSE 226 B LEU 227 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale33 covale both ? C GLC . C1 ? ? ? 1_555 C FRU . O2 ? ? C GLC 1 C FRU 2 1_555 ? ? ? ? ? ? ? 1.426 sing ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 52 A . ? GLY 70 A PRO 53 A ? PRO 71 A 1 2.93 2 THR 185 A . ? THR 203 A PRO 186 A ? PRO 204 A 1 -10.82 3 GLY 52 B . ? GLY 70 B PRO 53 B ? PRO 71 B 1 2.26 4 THR 185 B . ? THR 203 B PRO 186 B ? PRO 204 B 1 -3.76 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? C ? 5 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 21 ? GLN A 23 ? ASP A 39 GLN A 41 A 2 ILE A 30 ? MSE A 34 ? ILE A 48 MSE A 52 A 3 VAL A 39 ? SER A 43 ? VAL A 57 SER A 61 A 4 HIS A 48 ? GLN A 51 ? HIS A 66 GLN A 69 A 5 LEU B 54 ? ASP B 56 ? LEU B 72 ASP B 74 A 6 ILE B 63 ? ASN B 64 ? ILE B 81 ASN B 82 B 1 ILE A 63 ? ASN A 64 ? ILE A 81 ASN A 82 B 2 TYR A 55 ? ASP A 56 ? TYR A 73 ASP A 74 B 3 HIS B 48 ? GLN B 51 ? HIS B 66 GLN B 69 B 4 GLY B 38 ? SER B 43 ? GLY B 56 SER B 61 B 5 ILE B 30 ? THR B 35 ? ILE B 48 THR B 53 B 6 ASP B 21 ? PRO B 24 ? ASP B 39 PRO B 42 C 1 ILE A 82 ? TYR A 84 ? ILE A 100 TYR A 102 C 2 ILE A 119 ? ALA A 125 ? ILE A 137 ALA A 143 C 3 HIS A 91 ? THR A 97 ? HIS A 109 THR A 115 C 4 ALA A 187 ? LEU A 190 ? ALA A 205 LEU A 208 C 5 ILE A 195 ? PRO A 197 ? ILE A 213 PRO A 215 D 1 ILE B 82 ? TYR B 84 ? ILE B 100 TYR B 102 D 2 ILE B 119 ? ALA B 125 ? ILE B 137 ALA B 143 D 3 HIS B 91 ? THR B 97 ? HIS B 109 THR B 115 D 4 ALA B 187 ? VAL B 189 ? ALA B 205 VAL B 207 D 5 ILE B 195 ? PRO B 197 ? ILE B 213 PRO B 215 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 23 ? N GLN A 41 O THR A 32 ? O THR A 50 A 2 3 N VAL A 33 ? N VAL A 51 O LEU A 40 ? O LEU A 58 A 3 4 N TYR A 41 ? N TYR A 59 O LEU A 50 ? O LEU A 68 A 4 5 N LEU A 49 ? N LEU A 67 O TYR B 55 ? O TYR B 73 A 5 6 N ASP B 56 ? N ASP B 74 O ILE B 63 ? O ILE B 81 B 1 2 O ILE A 63 ? O ILE A 81 N ASP A 56 ? N ASP A 74 B 2 3 N TYR A 55 ? N TYR A 73 O LEU B 49 ? O LEU B 67 B 3 4 O LEU B 50 ? O LEU B 68 N TYR B 41 ? N TYR B 59 B 4 5 O LEU B 40 ? O LEU B 58 N VAL B 33 ? N VAL B 51 B 5 6 O THR B 32 ? O THR B 50 N GLN B 23 ? N GLN B 41 C 1 2 N TYR A 84 ? N TYR A 102 O VAL A 121 ? O VAL A 139 C 2 3 O ARG A 122 ? O ARG A 140 N VAL A 95 ? N VAL A 113 C 3 4 N THR A 94 ? N THR A 112 O VAL A 189 ? O VAL A 207 C 4 5 N ILE A 188 ? N ILE A 206 O VAL A 196 ? O VAL A 214 D 1 2 N TYR B 84 ? N TYR B 102 O VAL B 121 ? O VAL B 139 D 2 3 O THR B 120 ? O THR B 138 N HIS B 91 ? N HIS B 109 D 3 4 N THR B 94 ? N THR B 112 O VAL B 189 ? O VAL B 207 D 4 5 N ILE B 188 ? N ILE B 206 O VAL B 196 ? O VAL B 214 # _database_PDB_matrix.entry_id 4NPB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4NPB _atom_sites.fract_transf_matrix[1][1] 0.011002 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007075 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024300 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 19 ? ? ? A . n A 1 2 ASN 2 20 ? ? ? A . n A 1 3 ALA 3 21 21 ALA ALA A . n A 1 4 ASP 4 22 22 ASP ASP A . n A 1 5 ASP 5 23 23 ASP ASP A . n A 1 6 SER 6 24 24 SER SER A . n A 1 7 ALA 7 25 25 ALA ALA A . n A 1 8 ILE 8 26 26 ILE ILE A . n A 1 9 GLN 9 27 27 GLN GLN A . n A 1 10 GLN 10 28 28 GLN GLN A . n A 1 11 THR 11 29 29 THR THR A . n A 1 12 LEU 12 30 30 LEU LEU A . n A 1 13 LYS 13 31 31 LYS LYS A . n A 1 14 LYS 14 32 32 LYS LYS A . n A 1 15 LEU 15 33 33 LEU LEU A . n A 1 16 ASP 16 34 34 ASP ASP A . n A 1 17 ILE 17 35 35 ILE ILE A . n A 1 18 GLN 18 36 36 GLN GLN A . n A 1 19 GLN 19 37 37 GLN GLN A . n A 1 20 ALA 20 38 38 ALA ALA A . n A 1 21 ASP 21 39 39 ASP ASP A . n A 1 22 ILE 22 40 40 ILE ILE A . n A 1 23 GLN 23 41 41 GLN GLN A . n A 1 24 PRO 24 42 42 PRO PRO A . n A 1 25 SER 25 43 43 SER SER A . n A 1 26 PRO 26 44 44 PRO PRO A . n A 1 27 ILE 27 45 45 ILE ILE A . n A 1 28 PRO 28 46 46 PRO PRO A . n A 1 29 GLY 29 47 47 GLY GLY A . n A 1 30 ILE 30 48 48 ILE ILE A . n A 1 31 SER 31 49 49 SER SER A . n A 1 32 THR 32 50 50 THR THR A . n A 1 33 VAL 33 51 51 VAL VAL A . n A 1 34 MSE 34 52 52 MSE MSE A . n A 1 35 THR 35 53 53 THR THR A . n A 1 36 GLU 36 54 54 GLU GLU A . n A 1 37 SER 37 55 55 SER SER A . n A 1 38 GLY 38 56 56 GLY GLY A . n A 1 39 VAL 39 57 57 VAL VAL A . n A 1 40 LEU 40 58 58 LEU LEU A . n A 1 41 TYR 41 59 59 TYR TYR A . n A 1 42 ILE 42 60 60 ILE ILE A . n A 1 43 SER 43 61 61 SER SER A . n A 1 44 ALA 44 62 62 ALA ALA A . n A 1 45 ASP 45 63 63 ASP ASP A . n A 1 46 GLY 46 64 64 GLY GLY A . n A 1 47 LYS 47 65 65 LYS LYS A . n A 1 48 HIS 48 66 66 HIS HIS A . n A 1 49 LEU 49 67 67 LEU LEU A . n A 1 50 LEU 50 68 68 LEU LEU A . n A 1 51 GLN 51 69 69 GLN GLN A . n A 1 52 GLY 52 70 70 GLY GLY A . n A 1 53 PRO 53 71 71 PRO PRO A . n A 1 54 LEU 54 72 72 LEU LEU A . n A 1 55 TYR 55 73 73 TYR TYR A . n A 1 56 ASP 56 74 74 ASP ASP A . n A 1 57 VAL 57 75 75 VAL VAL A . n A 1 58 SER 58 76 76 SER SER A . n A 1 59 GLY 59 77 77 GLY GLY A . n A 1 60 ASP 60 78 78 ASP ASP A . n A 1 61 GLN 61 79 79 GLN GLN A . n A 1 62 PRO 62 80 80 PRO PRO A . n A 1 63 ILE 63 81 81 ILE ILE A . n A 1 64 ASN 64 82 82 ASN ASN A . n A 1 65 VAL 65 83 83 VAL VAL A . n A 1 66 THR 66 84 84 THR THR A . n A 1 67 ASN 67 85 85 ASN ASN A . n A 1 68 GLN 68 86 86 GLN GLN A . n A 1 69 ALA 69 87 87 ALA ALA A . n A 1 70 LEU 70 88 88 LEU LEU A . n A 1 71 LEU 71 89 89 LEU LEU A . n A 1 72 LYS 72 90 90 LYS LYS A . n A 1 73 LYS 73 91 91 LYS LYS A . n A 1 74 LEU 74 92 92 LEU LEU A . n A 1 75 GLU 75 93 93 GLU GLU A . n A 1 76 ALA 76 94 94 ALA ALA A . n A 1 77 LEU 77 95 95 LEU LEU A . n A 1 78 SER 78 96 96 SER SER A . n A 1 79 SER 79 97 97 SER SER A . n A 1 80 GLU 80 98 98 GLU GLU A . n A 1 81 MSE 81 99 99 MSE MSE A . n A 1 82 ILE 82 100 100 ILE ILE A . n A 1 83 VAL 83 101 101 VAL VAL A . n A 1 84 TYR 84 102 102 TYR TYR A . n A 1 85 LYS 85 103 103 LYS LYS A . n A 1 86 ALA 86 104 104 ALA ALA A . n A 1 87 PRO 87 105 105 PRO PRO A . n A 1 88 GLU 88 106 106 GLU GLU A . n A 1 89 GLU 89 107 107 GLU GLU A . n A 1 90 LYS 90 108 108 LYS LYS A . n A 1 91 HIS 91 109 109 HIS HIS A . n A 1 92 VAL 92 110 110 VAL VAL A . n A 1 93 ILE 93 111 111 ILE ILE A . n A 1 94 THR 94 112 112 THR THR A . n A 1 95 VAL 95 113 113 VAL VAL A . n A 1 96 PHE 96 114 114 PHE PHE A . n A 1 97 THR 97 115 115 THR THR A . n A 1 98 ASP 98 116 116 ASP ASP A . n A 1 99 ILE 99 117 117 ILE ILE A . n A 1 100 THR 100 118 118 THR THR A . n A 1 101 CYS 101 119 119 CYS CYS A . n A 1 102 GLY 102 120 120 GLY GLY A . n A 1 103 TYR 103 121 121 TYR TYR A . n A 1 104 CYS 104 122 122 CYS CYS A . n A 1 105 ARG 105 123 123 ARG ARG A . n A 1 106 LYS 106 124 124 LYS LYS A . n A 1 107 LEU 107 125 125 LEU LEU A . n A 1 108 HIS 108 126 126 HIS HIS A . n A 1 109 GLU 109 127 127 GLU GLU A . n A 1 110 GLN 110 128 128 GLN GLN A . n A 1 111 MSE 111 129 129 MSE MSE A . n A 1 112 LYS 112 130 130 LYS LYS A . n A 1 113 ASP 113 131 131 ASP ASP A . n A 1 114 TYR 114 132 132 TYR TYR A . n A 1 115 ASN 115 133 133 ASN ASN A . n A 1 116 ALA 116 134 134 ALA ALA A . n A 1 117 LEU 117 135 135 LEU LEU A . n A 1 118 GLY 118 136 136 GLY GLY A . n A 1 119 ILE 119 137 137 ILE ILE A . n A 1 120 THR 120 138 138 THR THR A . n A 1 121 VAL 121 139 139 VAL VAL A . n A 1 122 ARG 122 140 140 ARG ARG A . n A 1 123 TYR 123 141 141 TYR TYR A . n A 1 124 LEU 124 142 142 LEU LEU A . n A 1 125 ALA 125 143 143 ALA ALA A . n A 1 126 PHE 126 144 144 PHE PHE A . n A 1 127 PRO 127 145 145 PRO PRO A . n A 1 128 ARG 128 146 146 ARG ARG A . n A 1 129 GLN 129 147 147 GLN GLN A . n A 1 130 GLY 130 148 148 GLY GLY A . n A 1 131 LEU 131 149 149 LEU LEU A . n A 1 132 SER 132 150 150 SER SER A . n A 1 133 SER 133 151 151 SER SER A . n A 1 134 GLN 134 152 152 GLN GLN A . n A 1 135 ALA 135 153 153 ALA ALA A . n A 1 136 GLU 136 154 154 GLU GLU A . n A 1 137 LYS 137 155 155 LYS LYS A . n A 1 138 ASP 138 156 156 ASP ASP A . n A 1 139 MSE 139 157 157 MSE MSE A . n A 1 140 ARG 140 158 158 ARG ARG A . n A 1 141 SER 141 159 159 SER SER A . n A 1 142 ILE 142 160 160 ILE ILE A . n A 1 143 TRP 143 161 161 TRP TRP A . n A 1 144 CYS 144 162 162 CYS CYS A . n A 1 145 MSE 145 163 163 MSE MSE A . n A 1 146 ALA 146 164 164 ALA ALA A . n A 1 147 ASP 147 165 165 ASP ASP A . n A 1 148 ARG 148 166 166 ARG ARG A . n A 1 149 ASN 149 167 167 ASN ASN A . n A 1 150 LYS 150 168 168 LYS LYS A . n A 1 151 ALA 151 169 169 ALA ALA A . n A 1 152 PHE 152 170 170 PHE PHE A . n A 1 153 ASP 153 171 171 ASP ASP A . n A 1 154 ASP 154 172 172 ASP ASP A . n A 1 155 ALA 155 173 173 ALA ALA A . n A 1 156 MSE 156 174 174 MSE MSE A . n A 1 157 LYS 157 175 175 LYS LYS A . n A 1 158 ASN 158 176 176 ASN ASN A . n A 1 159 ASN 159 177 177 ASN ASN A . n A 1 160 ASP 160 178 178 ASP ASP A . n A 1 161 ILE 161 179 179 ILE ILE A . n A 1 162 SER 162 180 180 SER SER A . n A 1 163 PRO 163 181 181 PRO PRO A . n A 1 164 ALA 164 182 182 ALA ALA A . n A 1 165 THR 165 183 183 THR THR A . n A 1 166 CYS 166 184 184 CYS CYS A . n A 1 167 LYS 167 185 185 LYS LYS A . n A 1 168 THR 168 186 186 THR THR A . n A 1 169 ASP 169 187 187 ASP ASP A . n A 1 170 ILE 170 188 188 ILE ILE A . n A 1 171 SER 171 189 189 SER SER A . n A 1 172 LYS 172 190 190 LYS LYS A . n A 1 173 HIS 173 191 191 HIS HIS A . n A 1 174 TYR 174 192 192 TYR TYR A . n A 1 175 GLN 175 193 193 GLN GLN A . n A 1 176 LEU 176 194 194 LEU LEU A . n A 1 177 GLY 177 195 195 GLY GLY A . n A 1 178 VAL 178 196 196 VAL VAL A . n A 1 179 GLN 179 197 197 GLN GLN A . n A 1 180 PHE 180 198 198 PHE PHE A . n A 1 181 GLY 181 199 199 GLY GLY A . n A 1 182 ILE 182 200 200 ILE ILE A . n A 1 183 GLN 183 201 201 GLN ALA A . n A 1 184 GLY 184 202 202 GLY GLY A . n A 1 185 THR 185 203 203 THR THR A . n A 1 186 PRO 186 204 204 PRO PRO A . n A 1 187 ALA 187 205 205 ALA ALA A . n A 1 188 ILE 188 206 206 ILE ILE A . n A 1 189 VAL 189 207 207 VAL VAL A . n A 1 190 LEU 190 208 208 LEU LEU A . n A 1 191 GLN 191 209 209 GLN GLN A . n A 1 192 ASN 192 210 210 ASN ASN A . n A 1 193 GLY 193 211 211 GLY GLY A . n A 1 194 THR 194 212 212 THR THR A . n A 1 195 ILE 195 213 213 ILE ILE A . n A 1 196 VAL 196 214 214 VAL VAL A . n A 1 197 PRO 197 215 215 PRO PRO A . n A 1 198 GLY 198 216 216 GLY GLY A . n A 1 199 TYR 199 217 217 TYR TYR A . n A 1 200 GLN 200 218 218 GLN GLN A . n A 1 201 GLY 201 219 219 GLY GLY A . n A 1 202 PRO 202 220 220 PRO PRO A . n A 1 203 LYS 203 221 221 LYS LYS A . n A 1 204 GLU 204 222 222 GLU GLU A . n A 1 205 MSE 205 223 223 MSE MSE A . n A 1 206 LEU 206 224 224 LEU LEU A . n A 1 207 GLN 207 225 225 GLN GLN A . n A 1 208 MSE 208 226 226 MSE MSE A . n A 1 209 LEU 209 227 227 LEU LEU A . n A 1 210 ASN 210 228 228 ASN ASN A . n A 1 211 ALA 211 229 229 ALA ALA A . n A 1 212 HIS 212 230 230 HIS HIS A . n A 1 213 GLN 213 231 231 GLN GLN A . n A 1 214 ALA 214 232 232 ALA ALA A . n A 1 215 SER 215 233 233 SER SER A . n A 1 216 LEU 216 234 234 LEU LEU A . n A 1 217 LYS 217 235 235 LYS LYS A . n A 1 218 ALA 218 236 ? ? ? A . n A 1 219 GLY 219 237 ? ? ? A . n A 1 220 GLY 220 238 ? ? ? A . n B 1 1 SER 1 19 ? ? ? B . n B 1 2 ASN 2 20 ? ? ? B . n B 1 3 ALA 3 21 21 ALA ALA B . n B 1 4 ASP 4 22 22 ASP ASP B . n B 1 5 ASP 5 23 23 ASP ASP B . n B 1 6 SER 6 24 24 SER SER B . n B 1 7 ALA 7 25 25 ALA ALA B . n B 1 8 ILE 8 26 26 ILE ILE B . n B 1 9 GLN 9 27 27 GLN GLN B . n B 1 10 GLN 10 28 28 GLN GLN B . n B 1 11 THR 11 29 29 THR THR B . n B 1 12 LEU 12 30 30 LEU LEU B . n B 1 13 LYS 13 31 31 LYS LYS B . n B 1 14 LYS 14 32 32 LYS LYS B . n B 1 15 LEU 15 33 33 LEU LEU B . n B 1 16 ASP 16 34 34 ASP ASP B . n B 1 17 ILE 17 35 35 ILE ILE B . n B 1 18 GLN 18 36 36 GLN GLN B . n B 1 19 GLN 19 37 37 GLN GLN B . n B 1 20 ALA 20 38 38 ALA ALA B . n B 1 21 ASP 21 39 39 ASP ASP B . n B 1 22 ILE 22 40 40 ILE ILE B . n B 1 23 GLN 23 41 41 GLN GLN B . n B 1 24 PRO 24 42 42 PRO PRO B . n B 1 25 SER 25 43 43 SER SER B . n B 1 26 PRO 26 44 44 PRO PRO B . n B 1 27 ILE 27 45 45 ILE ILE B . n B 1 28 PRO 28 46 46 PRO PRO B . n B 1 29 GLY 29 47 47 GLY GLY B . n B 1 30 ILE 30 48 48 ILE ILE B . n B 1 31 SER 31 49 49 SER SER B . n B 1 32 THR 32 50 50 THR THR B . n B 1 33 VAL 33 51 51 VAL VAL B . n B 1 34 MSE 34 52 52 MSE MSE B . n B 1 35 THR 35 53 53 THR THR B . n B 1 36 GLU 36 54 54 GLU GLU B . n B 1 37 SER 37 55 55 SER SER B . n B 1 38 GLY 38 56 56 GLY GLY B . n B 1 39 VAL 39 57 57 VAL VAL B . n B 1 40 LEU 40 58 58 LEU LEU B . n B 1 41 TYR 41 59 59 TYR TYR B . n B 1 42 ILE 42 60 60 ILE ILE B . n B 1 43 SER 43 61 61 SER SER B . n B 1 44 ALA 44 62 62 ALA ALA B . n B 1 45 ASP 45 63 63 ASP ASP B . n B 1 46 GLY 46 64 64 GLY GLY B . n B 1 47 LYS 47 65 65 LYS LYS B . n B 1 48 HIS 48 66 66 HIS HIS B . n B 1 49 LEU 49 67 67 LEU LEU B . n B 1 50 LEU 50 68 68 LEU LEU B . n B 1 51 GLN 51 69 69 GLN GLN B . n B 1 52 GLY 52 70 70 GLY GLY B . n B 1 53 PRO 53 71 71 PRO PRO B . n B 1 54 LEU 54 72 72 LEU LEU B . n B 1 55 TYR 55 73 73 TYR TYR B . n B 1 56 ASP 56 74 74 ASP ASP B . n B 1 57 VAL 57 75 75 VAL VAL B . n B 1 58 SER 58 76 76 SER SER B . n B 1 59 GLY 59 77 77 GLY GLY B . n B 1 60 ASP 60 78 78 ASP ASP B . n B 1 61 GLN 61 79 79 GLN GLN B . n B 1 62 PRO 62 80 80 PRO PRO B . n B 1 63 ILE 63 81 81 ILE ILE B . n B 1 64 ASN 64 82 82 ASN ASN B . n B 1 65 VAL 65 83 83 VAL VAL B . n B 1 66 THR 66 84 84 THR THR B . n B 1 67 ASN 67 85 85 ASN ASN B . n B 1 68 GLN 68 86 86 GLN GLN B . n B 1 69 ALA 69 87 87 ALA ALA B . n B 1 70 LEU 70 88 88 LEU LEU B . n B 1 71 LEU 71 89 89 LEU LEU B . n B 1 72 LYS 72 90 90 LYS LYS B . n B 1 73 LYS 73 91 91 LYS LYS B . n B 1 74 LEU 74 92 92 LEU LEU B . n B 1 75 GLU 75 93 93 GLU GLU B . n B 1 76 ALA 76 94 94 ALA ALA B . n B 1 77 LEU 77 95 95 LEU LEU B . n B 1 78 SER 78 96 96 SER SER B . n B 1 79 SER 79 97 97 SER SER B . n B 1 80 GLU 80 98 98 GLU GLU B . n B 1 81 MSE 81 99 99 MSE MSE B . n B 1 82 ILE 82 100 100 ILE ILE B . n B 1 83 VAL 83 101 101 VAL VAL B . n B 1 84 TYR 84 102 102 TYR TYR B . n B 1 85 LYS 85 103 103 LYS LYS B . n B 1 86 ALA 86 104 104 ALA ALA B . n B 1 87 PRO 87 105 105 PRO PRO B . n B 1 88 GLU 88 106 106 GLU GLU B . n B 1 89 GLU 89 107 107 GLU GLU B . n B 1 90 LYS 90 108 108 LYS LYS B . n B 1 91 HIS 91 109 109 HIS HIS B . n B 1 92 VAL 92 110 110 VAL VAL B . n B 1 93 ILE 93 111 111 ILE ILE B . n B 1 94 THR 94 112 112 THR THR B . n B 1 95 VAL 95 113 113 VAL VAL B . n B 1 96 PHE 96 114 114 PHE PHE B . n B 1 97 THR 97 115 115 THR THR B . n B 1 98 ASP 98 116 116 ASP ASP B . n B 1 99 ILE 99 117 117 ILE ILE B . n B 1 100 THR 100 118 118 THR THR B . n B 1 101 CYS 101 119 119 CYS CYS B . n B 1 102 GLY 102 120 120 GLY GLY B . n B 1 103 TYR 103 121 121 TYR TYR B . n B 1 104 CYS 104 122 122 CYS CYS B . n B 1 105 ARG 105 123 123 ARG ARG B . n B 1 106 LYS 106 124 124 LYS LYS B . n B 1 107 LEU 107 125 125 LEU LEU B . n B 1 108 HIS 108 126 126 HIS HIS B . n B 1 109 GLU 109 127 127 GLU GLU B . n B 1 110 GLN 110 128 128 GLN GLN B . n B 1 111 MSE 111 129 129 MSE MSE B . n B 1 112 LYS 112 130 130 LYS LYS B . n B 1 113 ASP 113 131 131 ASP ASP B . n B 1 114 TYR 114 132 132 TYR TYR B . n B 1 115 ASN 115 133 133 ASN ASN B . n B 1 116 ALA 116 134 134 ALA ALA B . n B 1 117 LEU 117 135 135 LEU LEU B . n B 1 118 GLY 118 136 136 GLY GLY B . n B 1 119 ILE 119 137 137 ILE ILE B . n B 1 120 THR 120 138 138 THR THR B . n B 1 121 VAL 121 139 139 VAL VAL B . n B 1 122 ARG 122 140 140 ARG ARG B . n B 1 123 TYR 123 141 141 TYR TYR B . n B 1 124 LEU 124 142 142 LEU LEU B . n B 1 125 ALA 125 143 143 ALA ALA B . n B 1 126 PHE 126 144 144 PHE PHE B . n B 1 127 PRO 127 145 145 PRO PRO B . n B 1 128 ARG 128 146 146 ARG ARG B . n B 1 129 GLN 129 147 147 GLN GLN B . n B 1 130 GLY 130 148 148 GLY GLY B . n B 1 131 LEU 131 149 149 LEU LEU B . n B 1 132 SER 132 150 150 SER SER B . n B 1 133 SER 133 151 151 SER SER B . n B 1 134 GLN 134 152 152 GLN GLN B . n B 1 135 ALA 135 153 153 ALA ALA B . n B 1 136 GLU 136 154 154 GLU GLU B . n B 1 137 LYS 137 155 155 LYS LYS B . n B 1 138 ASP 138 156 156 ASP ASP B . n B 1 139 MSE 139 157 157 MSE MSE B . n B 1 140 ARG 140 158 158 ARG ARG B . n B 1 141 SER 141 159 159 SER SER B . n B 1 142 ILE 142 160 160 ILE ILE B . n B 1 143 TRP 143 161 161 TRP TRP B . n B 1 144 CYS 144 162 162 CYS CYS B . n B 1 145 MSE 145 163 163 MSE MSE B . n B 1 146 ALA 146 164 164 ALA ALA B . n B 1 147 ASP 147 165 165 ASP ASP B . n B 1 148 ARG 148 166 166 ARG ARG B . n B 1 149 ASN 149 167 167 ASN ASN B . n B 1 150 LYS 150 168 168 LYS LYS B . n B 1 151 ALA 151 169 169 ALA ALA B . n B 1 152 PHE 152 170 170 PHE PHE B . n B 1 153 ASP 153 171 171 ASP ASP B . n B 1 154 ASP 154 172 172 ASP ASP B . n B 1 155 ALA 155 173 173 ALA ALA B . n B 1 156 MSE 156 174 174 MSE MSE B . n B 1 157 LYS 157 175 175 LYS LYS B . n B 1 158 ASN 158 176 176 ASN ASN B . n B 1 159 ASN 159 177 177 ASN ASN B . n B 1 160 ASP 160 178 178 ASP ASP B . n B 1 161 ILE 161 179 179 ILE ILE B . n B 1 162 SER 162 180 180 SER SER B . n B 1 163 PRO 163 181 181 PRO PRO B . n B 1 164 ALA 164 182 182 ALA ALA B . n B 1 165 THR 165 183 183 THR THR B . n B 1 166 CYS 166 184 184 CYS CYS B . n B 1 167 LYS 167 185 185 LYS LYS B . n B 1 168 THR 168 186 186 THR THR B . n B 1 169 ASP 169 187 187 ASP ASP B . n B 1 170 ILE 170 188 188 ILE ILE B . n B 1 171 SER 171 189 189 SER SER B . n B 1 172 LYS 172 190 190 LYS LYS B . n B 1 173 HIS 173 191 191 HIS HIS B . n B 1 174 TYR 174 192 192 TYR TYR B . n B 1 175 GLN 175 193 193 GLN GLN B . n B 1 176 LEU 176 194 194 LEU LEU B . n B 1 177 GLY 177 195 195 GLY GLY B . n B 1 178 VAL 178 196 196 VAL VAL B . n B 1 179 GLN 179 197 197 GLN GLN B . n B 1 180 PHE 180 198 198 PHE PHE B . n B 1 181 GLY 181 199 199 GLY GLY B . n B 1 182 ILE 182 200 200 ILE ILE B . n B 1 183 GLN 183 201 201 GLN GLN B . n B 1 184 GLY 184 202 202 GLY GLY B . n B 1 185 THR 185 203 203 THR THR B . n B 1 186 PRO 186 204 204 PRO PRO B . n B 1 187 ALA 187 205 205 ALA ALA B . n B 1 188 ILE 188 206 206 ILE ILE B . n B 1 189 VAL 189 207 207 VAL VAL B . n B 1 190 LEU 190 208 208 LEU LEU B . n B 1 191 GLN 191 209 209 GLN GLN B . n B 1 192 ASN 192 210 210 ASN ASN B . n B 1 193 GLY 193 211 211 GLY GLY B . n B 1 194 THR 194 212 212 THR THR B . n B 1 195 ILE 195 213 213 ILE ILE B . n B 1 196 VAL 196 214 214 VAL VAL B . n B 1 197 PRO 197 215 215 PRO PRO B . n B 1 198 GLY 198 216 216 GLY GLY B . n B 1 199 TYR 199 217 217 TYR TYR B . n B 1 200 GLN 200 218 218 GLN GLN B . n B 1 201 GLY 201 219 219 GLY GLY B . n B 1 202 PRO 202 220 220 PRO PRO B . n B 1 203 LYS 203 221 221 LYS LYS B . n B 1 204 GLU 204 222 222 GLU GLU B . n B 1 205 MSE 205 223 223 MSE MSE B . n B 1 206 LEU 206 224 224 LEU LEU B . n B 1 207 GLN 207 225 225 GLN GLN B . n B 1 208 MSE 208 226 226 MSE MSE B . n B 1 209 LEU 209 227 227 LEU LEU B . n B 1 210 ASN 210 228 228 ASN ASN B . n B 1 211 ALA 211 229 229 ALA ALA B . n B 1 212 HIS 212 230 230 HIS HIS B . n B 1 213 GLN 213 231 231 GLN GLN B . n B 1 214 ALA 214 232 232 ALA ALA B . n B 1 215 SER 215 233 233 SER SER B . n B 1 216 LEU 216 234 234 LEU LEU B . n B 1 217 LYS 217 235 235 LYS LYS B . n B 1 218 ALA 218 236 ? ? ? B . n B 1 219 GLY 219 237 ? ? ? B . n B 1 220 GLY 220 238 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 PO4 1 302 1 PO4 PO4 A . E 3 PO4 1 301 2 PO4 PO4 B . F 4 HOH 1 401 1 HOH HOH A . F 4 HOH 2 402 2 HOH HOH A . F 4 HOH 3 403 3 HOH HOH A . F 4 HOH 4 404 4 HOH HOH A . F 4 HOH 5 405 5 HOH HOH A . F 4 HOH 6 406 6 HOH HOH A . F 4 HOH 7 407 7 HOH HOH A . F 4 HOH 8 408 8 HOH HOH A . F 4 HOH 9 409 9 HOH HOH A . F 4 HOH 10 410 10 HOH HOH A . F 4 HOH 11 411 11 HOH HOH A . F 4 HOH 12 412 12 HOH HOH A . F 4 HOH 13 413 13 HOH HOH A . F 4 HOH 14 414 14 HOH HOH A . F 4 HOH 15 415 15 HOH HOH A . F 4 HOH 16 416 16 HOH HOH A . F 4 HOH 17 417 17 HOH HOH A . F 4 HOH 18 418 18 HOH HOH A . F 4 HOH 19 419 19 HOH HOH A . F 4 HOH 20 420 20 HOH HOH A . F 4 HOH 21 421 21 HOH HOH A . F 4 HOH 22 422 22 HOH HOH A . F 4 HOH 23 423 23 HOH HOH A . F 4 HOH 24 424 24 HOH HOH A . F 4 HOH 25 425 25 HOH HOH A . F 4 HOH 26 426 26 HOH HOH A . F 4 HOH 27 427 27 HOH HOH A . G 4 HOH 1 401 28 HOH HOH B . G 4 HOH 2 402 29 HOH HOH B . G 4 HOH 3 403 30 HOH HOH B . G 4 HOH 4 404 31 HOH HOH B . G 4 HOH 5 405 32 HOH HOH B . G 4 HOH 6 406 33 HOH HOH B . G 4 HOH 7 407 34 HOH HOH B . G 4 HOH 8 408 35 HOH HOH B . G 4 HOH 9 409 36 HOH HOH B . G 4 HOH 10 410 37 HOH HOH B . G 4 HOH 11 411 38 HOH HOH B . G 4 HOH 12 412 39 HOH HOH B . G 4 HOH 13 413 40 HOH HOH B . G 4 HOH 14 414 41 HOH HOH B . G 4 HOH 15 415 42 HOH HOH B . G 4 HOH 16 416 43 HOH HOH B . G 4 HOH 17 417 44 HOH HOH B . G 4 HOH 18 418 45 HOH HOH B . G 4 HOH 19 419 46 HOH HOH B . G 4 HOH 20 420 47 HOH HOH B . G 4 HOH 21 421 48 HOH HOH B . G 4 HOH 22 422 49 HOH HOH B . G 4 HOH 23 423 50 HOH HOH B . G 4 HOH 24 424 51 HOH HOH B . G 4 HOH 25 425 52 HOH HOH B . G 4 HOH 26 426 53 HOH HOH B . G 4 HOH 27 427 54 HOH HOH B . G 4 HOH 28 428 55 HOH HOH B . G 4 HOH 29 429 56 HOH HOH B . G 4 HOH 30 430 57 HOH HOH B . G 4 HOH 31 431 58 HOH HOH B . G 4 HOH 32 432 59 HOH HOH B . G 4 HOH 33 433 60 HOH HOH B . G 4 HOH 34 434 61 HOH HOH B . G 4 HOH 35 435 62 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_900003 _pdbx_molecule_features.name sucrose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900003 _pdbx_molecule.asym_id C # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 34 A MSE 52 ? MET SELENOMETHIONINE 2 A MSE 81 A MSE 99 ? MET SELENOMETHIONINE 3 A MSE 111 A MSE 129 ? MET SELENOMETHIONINE 4 A MSE 139 A MSE 157 ? MET SELENOMETHIONINE 5 A MSE 145 A MSE 163 ? MET SELENOMETHIONINE 6 A MSE 156 A MSE 174 ? MET SELENOMETHIONINE 7 A MSE 205 A MSE 223 ? MET SELENOMETHIONINE 8 A MSE 208 A MSE 226 ? MET SELENOMETHIONINE 9 B MSE 34 B MSE 52 ? MET SELENOMETHIONINE 10 B MSE 81 B MSE 99 ? MET SELENOMETHIONINE 11 B MSE 111 B MSE 129 ? MET SELENOMETHIONINE 12 B MSE 139 B MSE 157 ? MET SELENOMETHIONINE 13 B MSE 145 B MSE 163 ? MET SELENOMETHIONINE 14 B MSE 156 B MSE 174 ? MET SELENOMETHIONINE 15 B MSE 205 B MSE 223 ? MET SELENOMETHIONINE 16 B MSE 208 B MSE 226 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2710 ? 1 MORE -20 ? 1 'SSA (A^2)' 21460 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-25 2 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Database references' 4 2 'Structure model' 'Derived calculations' 5 2 'Structure model' 'Non-polymer description' 6 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' entity_name_com 5 2 'Structure model' pdbx_branch_scheme 6 2 'Structure model' pdbx_chem_comp_identifier 7 2 'Structure model' pdbx_entity_branch 8 2 'Structure model' pdbx_entity_branch_descriptor 9 2 'Structure model' pdbx_entity_branch_link 10 2 'Structure model' pdbx_entity_branch_list 11 2 'Structure model' pdbx_entity_nonpoly 12 2 'Structure model' pdbx_molecule_features 13 2 'Structure model' pdbx_nonpoly_scheme 14 2 'Structure model' struct_conn 15 2 'Structure model' struct_ref_seq_dif 16 2 'Structure model' struct_site 17 2 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_atom_id' 10 2 'Structure model' '_atom_site.label_comp_id' 11 2 'Structure model' '_atom_site.type_symbol' 12 2 'Structure model' '_chem_comp.formula' 13 2 'Structure model' '_chem_comp.formula_weight' 14 2 'Structure model' '_chem_comp.id' 15 2 'Structure model' '_chem_comp.mon_nstd_flag' 16 2 'Structure model' '_chem_comp.name' 17 2 'Structure model' '_chem_comp.type' 18 2 'Structure model' '_entity.formula_weight' 19 2 'Structure model' '_entity.pdbx_description' 20 2 'Structure model' '_entity.type' 21 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 1.2821 38.2852 17.7985 0.2232 0.3323 0.4043 0.0329 -0.0298 0.0250 2.2171 3.5800 9.0660 -0.6698 -1.5965 2.5475 0.0193 -0.1309 -0.0321 -0.0837 -0.0769 0.0006 -0.6509 -0.2474 0.0646 'X-RAY DIFFRACTION' 2 ? refined 6.6328 46.9529 4.0603 0.3101 0.3351 0.3032 -0.0066 -0.0781 -0.0266 3.5184 4.4799 7.7959 3.6955 -4.4287 -5.8049 -0.1481 0.2708 -0.0051 -0.5743 -0.2320 0.3604 -0.0563 -0.1947 0.3844 'X-RAY DIFFRACTION' 3 ? refined 19.8982 53.2360 1.1443 0.3552 0.2845 0.2013 0.0109 -0.0004 0.0255 2.3310 5.1998 2.8924 -0.2668 -0.1338 1.8024 -0.0074 0.0343 0.1039 -0.2867 0.0553 -0.2807 -0.2881 0.0625 -0.0391 'X-RAY DIFFRACTION' 4 ? refined 4.8515 22.5233 17.6840 0.3117 0.3567 0.5180 -0.0139 0.0344 0.0373 3.9586 6.0876 9.3114 0.1461 1.5103 3.5606 -0.0026 -0.0045 -0.3386 0.2122 -0.2031 0.3314 0.8882 -0.4500 0.1797 'X-RAY DIFFRACTION' 5 ? refined 27.3255 18.8969 32.8937 0.3182 0.2750 0.2462 -0.0204 -0.0665 0.0217 2.5557 5.5276 3.4325 -0.8599 -0.1953 0.5154 0.0691 -0.0943 0.0523 0.2276 0.0985 -0.3788 0.1847 -0.1031 -0.1657 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 21 through 82 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 83 through 98 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 99 through 235 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 21 through 82 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 83 through 235 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 SHELXD phasing . ? 2 MLPHARE phasing . ? 3 DM 'model building' . ? 4 ARP 'model building' . ? 5 WARP 'model building' . ? 6 HKL-3000 phasing . ? 7 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 8 HKL-3000 'data reduction' . ? 9 HKL-3000 'data scaling' . ? 10 DM phasing . ? 11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 184 ? ? -150.03 -140.75 2 1 ASP A 187 ? ? -103.34 -163.45 3 1 PRO B 105 ? ? -42.37 -72.49 4 1 ASN B 176 ? ? 68.59 -0.49 5 1 ILE B 188 ? ? -69.98 0.47 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 31 ? CE ? A LYS 13 CE 2 1 Y 1 A LYS 31 ? NZ ? A LYS 13 NZ 3 1 Y 1 A GLN 37 ? CG ? A GLN 19 CG 4 1 Y 1 A GLN 37 ? CD ? A GLN 19 CD 5 1 Y 1 A GLN 37 ? OE1 ? A GLN 19 OE1 6 1 Y 1 A GLN 37 ? NE2 ? A GLN 19 NE2 7 1 Y 1 A GLN 69 ? OE1 ? A GLN 51 OE1 8 1 Y 1 A GLN 69 ? NE2 ? A GLN 51 NE2 9 1 Y 1 A LYS 90 ? CE ? A LYS 72 CE 10 1 Y 1 A LYS 90 ? NZ ? A LYS 72 NZ 11 1 Y 1 A LYS 91 ? CE ? A LYS 73 CE 12 1 Y 1 A LYS 91 ? NZ ? A LYS 73 NZ 13 1 Y 1 A LYS 103 ? NZ ? A LYS 85 NZ 14 1 Y 1 A ARG 123 ? CD ? A ARG 105 CD 15 1 Y 1 A ARG 123 ? NE ? A ARG 105 NE 16 1 Y 1 A ARG 123 ? CZ ? A ARG 105 CZ 17 1 Y 1 A ARG 123 ? NH1 ? A ARG 105 NH1 18 1 Y 1 A ARG 123 ? NH2 ? A ARG 105 NH2 19 1 Y 1 A ASN 176 ? CG ? A ASN 158 CG 20 1 Y 1 A ASN 176 ? OD1 ? A ASN 158 OD1 21 1 Y 1 A ASN 176 ? ND2 ? A ASN 158 ND2 22 1 Y 1 A GLN 201 ? CG ? A GLN 183 CG 23 1 Y 1 A GLN 201 ? CD ? A GLN 183 CD 24 1 Y 1 A GLN 201 ? OE1 ? A GLN 183 OE1 25 1 Y 1 A GLN 201 ? NE2 ? A GLN 183 NE2 26 1 Y 1 A LYS 235 ? CE ? A LYS 217 CE 27 1 Y 1 A LYS 235 ? NZ ? A LYS 217 NZ 28 1 Y 1 B LYS 31 ? CE ? B LYS 13 CE 29 1 Y 1 B LYS 31 ? NZ ? B LYS 13 NZ 30 1 Y 1 B LYS 90 ? CE ? B LYS 72 CE 31 1 Y 1 B LYS 90 ? NZ ? B LYS 72 NZ 32 1 Y 1 B LYS 103 ? CE ? B LYS 85 CE 33 1 Y 1 B LYS 103 ? NZ ? B LYS 85 NZ 34 1 Y 1 B LYS 108 ? CG ? B LYS 90 CG 35 1 Y 1 B LYS 108 ? CD ? B LYS 90 CD 36 1 Y 1 B LYS 108 ? CE ? B LYS 90 CE 37 1 Y 1 B LYS 108 ? NZ ? B LYS 90 NZ 38 1 Y 1 B LYS 130 ? CG ? B LYS 112 CG 39 1 Y 1 B LYS 130 ? CD ? B LYS 112 CD 40 1 Y 1 B LYS 130 ? CE ? B LYS 112 CE 41 1 Y 1 B LYS 130 ? NZ ? B LYS 112 NZ 42 1 Y 1 B LYS 155 ? CE ? B LYS 137 CE 43 1 Y 1 B LYS 155 ? NZ ? B LYS 137 NZ 44 1 Y 1 B LYS 221 ? CE ? B LYS 203 CE 45 1 Y 1 B LYS 221 ? NZ ? B LYS 203 NZ 46 1 Y 1 B GLU 222 ? CG ? B GLU 204 CG 47 1 Y 1 B GLU 222 ? CD ? B GLU 204 CD 48 1 Y 1 B GLU 222 ? OE1 ? B GLU 204 OE1 49 1 Y 1 B GLU 222 ? OE2 ? B GLU 204 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 19 ? A SER 1 2 1 Y 1 A ASN 20 ? A ASN 2 3 1 Y 1 A ALA 236 ? A ALA 218 4 1 Y 1 A GLY 237 ? A GLY 219 5 1 Y 1 A GLY 238 ? A GLY 220 6 1 Y 1 B SER 19 ? B SER 1 7 1 Y 1 B ASN 20 ? B ASN 2 8 1 Y 1 B ALA 236 ? B ALA 218 9 1 Y 1 B GLY 237 ? B GLY 219 10 1 Y 1 B GLY 238 ? B GLY 220 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 GLC 1 C GLC 1 C SUC 1 n C 2 FRU 2 C FRU 2 C SUC 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FRU 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DFrufb FRU 'COMMON NAME' GMML 1.0 b-D-fructofuranose FRU 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Fruf FRU 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fru GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DFrufb2-1DGlcpa 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GLC 1 n 2 FRU 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PHOSPHATE ION' PO4 4 water HOH #