HEADER OXIDOREDUCTASE 21-NOV-13 4NPC TITLE CRYSTAL STRUCTURE OF AN OXIDOREDUCTASE, SHORT-CHAIN TITLE 2 DEHYDROGENASE/REDUCTASE FAMILY PROTEIN FROM BRUCELLA SUIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SORBITOL DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA SUIS; SOURCE 3 ORGANISM_TAXID: 470137; SOURCE 4 STRAIN: ATCC 23445 / NCTC 10510; SOURCE 5 GENE: POLS, BSUIS_A1688; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, SSGCID, REDUCTASE, SHORT-CHAIN DEHYDROGENASE, KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.M.DRANOW,D.R.DAVIES,T.E.EDWARDS,D.LORIMER,SEATTLE STRUCTURAL AUTHOR 2 GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 20-SEP-23 4NPC 1 REMARK SEQADV REVDAT 2 22-NOV-17 4NPC 1 REMARK REVDAT 1 11-DEC-13 4NPC 0 JRNL AUTH D.M.DRANOW,D.R.DAVIES,T.E.EDWARDS,D.LORIMER JRNL TITL CRYSTAL STRUCTURE OF AN OXIDOREDUCTASE, SHORT-CHAIN JRNL TITL 2 DEHYDROGENASE/REDUCTASE FAMILY PROTEIN FROM BRUCELLA SUIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 46512 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2353 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3224 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2030 REMARK 3 BIN FREE R VALUE SET COUNT : 166 REMARK 3 BIN FREE R VALUE : 0.2490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3614 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 387 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : -0.41000 REMARK 3 B33 (A**2) : 0.82000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.101 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.029 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3747 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3712 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5107 ; 1.497 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8543 ; 0.809 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 526 ; 6.092 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 119 ;37.712 ;25.798 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 605 ;12.819 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;15.373 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 616 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4337 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 769 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2051 ; 0.931 ; 1.354 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2048 ; 0.928 ; 1.352 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2568 ; 1.391 ; 2.023 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 96 REMARK 3 ORIGIN FOR THE GROUP (A): 30.8363 -4.0072 24.9700 REMARK 3 T TENSOR REMARK 3 T11: 0.0355 T22: 0.0800 REMARK 3 T33: 0.1479 T12: 0.0416 REMARK 3 T13: 0.0303 T23: -0.0200 REMARK 3 L TENSOR REMARK 3 L11: 1.4665 L22: 1.2379 REMARK 3 L33: 0.3950 L12: 0.4967 REMARK 3 L13: -0.2181 L23: 0.0078 REMARK 3 S TENSOR REMARK 3 S11: -0.0075 S12: 0.0315 S13: -0.1829 REMARK 3 S21: -0.0566 S22: -0.0133 S23: -0.2940 REMARK 3 S31: 0.0276 S32: 0.0362 S33: 0.0208 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 97 A 199 REMARK 3 ORIGIN FOR THE GROUP (A): 16.0702 6.0490 27.5678 REMARK 3 T TENSOR REMARK 3 T11: 0.0853 T22: 0.1202 REMARK 3 T33: 0.0550 T12: 0.0275 REMARK 3 T13: 0.0019 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 1.2861 L22: 1.2115 REMARK 3 L33: 0.3372 L12: -0.1873 REMARK 3 L13: -0.1555 L23: 0.3421 REMARK 3 S TENSOR REMARK 3 S11: -0.0418 S12: -0.0762 S13: 0.0337 REMARK 3 S21: -0.0091 S22: 0.0339 S23: -0.1968 REMARK 3 S31: 0.0155 S32: 0.0778 S33: 0.0080 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 200 A 209 REMARK 3 ORIGIN FOR THE GROUP (A): 19.7099 3.5439 49.8110 REMARK 3 T TENSOR REMARK 3 T11: 0.3205 T22: 0.4379 REMARK 3 T33: 0.3980 T12: -0.1433 REMARK 3 T13: 0.0677 T23: -0.1367 REMARK 3 L TENSOR REMARK 3 L11: 6.8788 L22: 0.7515 REMARK 3 L33: 11.8031 L12: -0.9570 REMARK 3 L13: -0.8167 L23: 2.8035 REMARK 3 S TENSOR REMARK 3 S11: -0.1339 S12: -1.0665 S13: 0.3585 REMARK 3 S21: -0.0676 S22: 0.2652 S23: -0.0799 REMARK 3 S31: -0.3587 S32: 0.6360 S33: -0.1313 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 210 A 257 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6762 -6.6637 36.6681 REMARK 3 T TENSOR REMARK 3 T11: 0.0809 T22: 0.0912 REMARK 3 T33: 0.0405 T12: 0.0250 REMARK 3 T13: -0.0263 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 1.3637 L22: 0.8155 REMARK 3 L33: 0.8863 L12: 0.1846 REMARK 3 L13: -0.4324 L23: -0.1687 REMARK 3 S TENSOR REMARK 3 S11: 0.0460 S12: -0.1804 S13: -0.0777 REMARK 3 S21: 0.0953 S22: -0.0402 S23: -0.1682 REMARK 3 S31: -0.0465 S32: 0.0808 S33: -0.0059 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 98 REMARK 3 ORIGIN FOR THE GROUP (A): -5.1982 32.0808 27.4591 REMARK 3 T TENSOR REMARK 3 T11: 0.0343 T22: 0.0477 REMARK 3 T33: 0.1668 T12: -0.0033 REMARK 3 T13: 0.0175 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 1.5079 L22: 2.4067 REMARK 3 L33: 0.7506 L12: 0.5361 REMARK 3 L13: -0.1751 L23: 0.0847 REMARK 3 S TENSOR REMARK 3 S11: 0.0478 S12: 0.0878 S13: 0.3681 REMARK 3 S21: 0.0849 S22: 0.0551 S23: 0.1680 REMARK 3 S31: 0.0055 S32: 0.0024 S33: -0.1029 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 99 B 199 REMARK 3 ORIGIN FOR THE GROUP (A): 4.5220 17.0614 25.6793 REMARK 3 T TENSOR REMARK 3 T11: 0.0824 T22: 0.0999 REMARK 3 T33: 0.0435 T12: 0.0068 REMARK 3 T13: 0.0021 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.3486 L22: 1.1359 REMARK 3 L33: 0.5727 L12: -0.2991 REMARK 3 L13: -0.5214 L23: 0.2182 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: 0.0205 S13: 0.2203 REMARK 3 S21: -0.0298 S22: 0.0521 S23: -0.0770 REMARK 3 S31: 0.0438 S32: 0.0821 S33: -0.0448 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 200 B 208 REMARK 3 ORIGIN FOR THE GROUP (A): -3.7606 16.2262 4.6396 REMARK 3 T TENSOR REMARK 3 T11: 0.3722 T22: 0.2899 REMARK 3 T33: 0.2662 T12: -0.0594 REMARK 3 T13: 0.0513 T23: 0.0355 REMARK 3 L TENSOR REMARK 3 L11: 1.2682 L22: 12.4142 REMARK 3 L33: 5.2878 L12: -3.5068 REMARK 3 L13: -1.9638 L23: 2.9709 REMARK 3 S TENSOR REMARK 3 S11: 0.3048 S12: 0.0717 S13: -0.0239 REMARK 3 S21: -0.8977 S22: -0.2382 S23: 0.1628 REMARK 3 S31: -0.4806 S32: -0.0111 S33: -0.0666 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 209 B 257 REMARK 3 ORIGIN FOR THE GROUP (A): -9.6838 12.1210 20.6131 REMARK 3 T TENSOR REMARK 3 T11: 0.1300 T22: 0.1477 REMARK 3 T33: 0.0558 T12: -0.0097 REMARK 3 T13: -0.0141 T23: 0.0319 REMARK 3 L TENSOR REMARK 3 L11: 1.5896 L22: 1.7020 REMARK 3 L33: 0.2541 L12: 0.4471 REMARK 3 L13: 0.3067 L23: 0.3892 REMARK 3 S TENSOR REMARK 3 S11: -0.0702 S12: 0.2455 S13: 0.1516 REMARK 3 S21: -0.1904 S22: 0.0900 S23: 0.1012 REMARK 3 S31: -0.0239 S32: 0.1076 S33: -0.0198 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4NPC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083487. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46513 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 70.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.5 REMARK 200 STARTING MODEL: PDB ENTRY 4EGF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MCSG1(F5): 0.2M SODIUM ACETATE, 20% REMARK 280 PEG-3350, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.50000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.87000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.87000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.25000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.87000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.87000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.75000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.87000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.87000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.25000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.87000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.87000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 87.75000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.50000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 GLN A 4 REMARK 465 ALA A 5 REMARK 465 PRO A 6 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 465 GLN B 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 7 CG CD OE1 NE2 REMARK 470 GLU A 199 CG CD OE1 OE2 REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 GLU A 208 CG CD OE1 OE2 REMARK 470 GLU B 199 CG CD OE1 OE2 REMARK 470 LYS B 203 CG CD CE NZ REMARK 470 GLU B 208 CG CD OE1 OE2 REMARK 470 LYS B 215 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 583 O HOH B 584 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 158 CD GLU B 158 OE1 0.076 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 98 38.13 -82.54 REMARK 500 LEU A 122 -60.29 -102.17 REMARK 500 ALA A 149 -117.61 -104.66 REMARK 500 SER A 150 157.89 171.34 REMARK 500 ALA B 98 31.15 -95.43 REMARK 500 LEU B 122 -62.31 -101.46 REMARK 500 ALA B 149 -117.99 -104.62 REMARK 500 SER B 150 158.47 176.32 REMARK 500 THR B 194 -164.86 -72.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-BRSUB.00143.E RELATED DB: TARGETTRACK DBREF 4NPC A 1 257 UNP B0CIA7 B0CIA7_BRUSI 1 257 DBREF 4NPC B 1 257 UNP B0CIA7 B0CIA7_BRUSI 1 257 SEQADV 4NPC MET A -7 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC ALA A -6 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS A -5 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS A -4 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS A -3 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS A -2 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS A -1 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS A 0 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC MET B -7 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC ALA B -6 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS B -5 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS B -4 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS B -3 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS B -2 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS B -1 UNP B0CIA7 EXPRESSION TAG SEQADV 4NPC HIS B 0 UNP B0CIA7 EXPRESSION TAG SEQRES 1 A 265 MET ALA HIS HIS HIS HIS HIS HIS MET SER ASP GLN ALA SEQRES 2 A 265 PRO GLN ILE ASP LEU ASN PHE PRO LEU SER GLU LYS VAL SEQRES 3 A 265 ALA ILE VAL THR GLY GLY ALA SER GLY ILE GLY ALA ALA SEQRES 4 A 265 ILE SER LYS ALA PHE ILE ALA LYS GLY ALA LYS VAL ALA SEQRES 5 A 265 VAL LEU ASP ILE SER ALA ASP ILE ALA LYS ALA LYS ALA SEQRES 6 A 265 GLU GLU LEU GLY GLU ASN ALA LYS PRO PHE VAL CYS ASP SEQRES 7 A 265 VAL SER SER GLN GLN SER VAL ASN ASP ALA ILE THR ALA SEQRES 8 A 265 VAL ILE SER GLN PHE GLY LYS ILE ASP ILE ALA VAL ASN SEQRES 9 A 265 SER ALA GLY VAL VAL TYR LEU ALA PRO ALA GLU ASP ILE SEQRES 10 A 265 SER LEU ASP TYR TRP ASP LYS THR ILE ASN ILE ASN LEU SEQRES 11 A 265 LYS GLY SER PHE LEU VAL THR GLN ALA VAL GLY ARG ALA SEQRES 12 A 265 MET ILE ALA ALA GLY ASN GLY GLY LYS ILE ILE ASN LEU SEQRES 13 A 265 ALA SER GLN ALA GLY THR VAL ALA ILE GLU GLU HIS VAL SEQRES 14 A 265 ALA TYR CYS ALA SER LYS PHE GLY VAL ILE GLY MET SER SEQRES 15 A 265 LYS THR PHE ALA ALA GLU TRP GLY LYS TYR GLY ILE CYS SEQRES 16 A 265 VAL ASN THR LEU SER PRO THR ILE VAL LEU THR GLU LEU SEQRES 17 A 265 GLY LYS LYS ALA TRP ALA GLY GLU LYS GLY GLU ALA ALA SEQRES 18 A 265 LYS LYS ARG ILE PRO ALA GLY ARG PHE ALA TYR PRO GLU SEQRES 19 A 265 GLU ILE ALA ALA ALA ALA VAL PHE LEU ALA SER ALA GLY SEQRES 20 A 265 ALA ASP MET ILE THR GLY ALA ASP LEU LEU ILE ASP GLY SEQRES 21 A 265 GLY TYR THR ILE LEU SEQRES 1 B 265 MET ALA HIS HIS HIS HIS HIS HIS MET SER ASP GLN ALA SEQRES 2 B 265 PRO GLN ILE ASP LEU ASN PHE PRO LEU SER GLU LYS VAL SEQRES 3 B 265 ALA ILE VAL THR GLY GLY ALA SER GLY ILE GLY ALA ALA SEQRES 4 B 265 ILE SER LYS ALA PHE ILE ALA LYS GLY ALA LYS VAL ALA SEQRES 5 B 265 VAL LEU ASP ILE SER ALA ASP ILE ALA LYS ALA LYS ALA SEQRES 6 B 265 GLU GLU LEU GLY GLU ASN ALA LYS PRO PHE VAL CYS ASP SEQRES 7 B 265 VAL SER SER GLN GLN SER VAL ASN ASP ALA ILE THR ALA SEQRES 8 B 265 VAL ILE SER GLN PHE GLY LYS ILE ASP ILE ALA VAL ASN SEQRES 9 B 265 SER ALA GLY VAL VAL TYR LEU ALA PRO ALA GLU ASP ILE SEQRES 10 B 265 SER LEU ASP TYR TRP ASP LYS THR ILE ASN ILE ASN LEU SEQRES 11 B 265 LYS GLY SER PHE LEU VAL THR GLN ALA VAL GLY ARG ALA SEQRES 12 B 265 MET ILE ALA ALA GLY ASN GLY GLY LYS ILE ILE ASN LEU SEQRES 13 B 265 ALA SER GLN ALA GLY THR VAL ALA ILE GLU GLU HIS VAL SEQRES 14 B 265 ALA TYR CYS ALA SER LYS PHE GLY VAL ILE GLY MET SER SEQRES 15 B 265 LYS THR PHE ALA ALA GLU TRP GLY LYS TYR GLY ILE CYS SEQRES 16 B 265 VAL ASN THR LEU SER PRO THR ILE VAL LEU THR GLU LEU SEQRES 17 B 265 GLY LYS LYS ALA TRP ALA GLY GLU LYS GLY GLU ALA ALA SEQRES 18 B 265 LYS LYS ARG ILE PRO ALA GLY ARG PHE ALA TYR PRO GLU SEQRES 19 B 265 GLU ILE ALA ALA ALA ALA VAL PHE LEU ALA SER ALA GLY SEQRES 20 B 265 ALA ASP MET ILE THR GLY ALA ASP LEU LEU ILE ASP GLY SEQRES 21 B 265 GLY TYR THR ILE LEU HET ACT A 301 4 HET ACT B 301 4 HETNAM ACT ACETATE ION FORMUL 3 ACT 2(C2 H3 O2 1-) FORMUL 5 HOH *387(H2 O) HELIX 1 1 SER A 26 LYS A 39 1 14 HELIX 2 2 SER A 49 GLY A 61 1 13 HELIX 3 3 SER A 73 GLY A 89 1 17 HELIX 4 4 SER A 110 LEU A 122 1 13 HELIX 5 5 LEU A 122 GLY A 140 1 19 HELIX 6 6 SER A 150 THR A 154 5 5 HELIX 7 7 HIS A 160 GLY A 182 1 23 HELIX 8 8 THR A 198 TRP A 205 1 8 HELIX 9 9 GLY A 207 LYS A 215 1 9 HELIX 10 10 TYR A 224 SER A 237 1 14 HELIX 11 11 GLY A 253 LEU A 257 5 5 HELIX 12 12 SER B 26 LYS B 39 1 14 HELIX 13 13 SER B 49 GLY B 61 1 13 HELIX 14 14 SER B 73 GLY B 89 1 17 HELIX 15 15 SER B 110 LEU B 122 1 13 HELIX 16 16 LEU B 122 GLY B 140 1 19 HELIX 17 17 SER B 150 THR B 154 5 5 HELIX 18 18 HIS B 160 GLY B 182 1 23 HELIX 19 19 THR B 198 TRP B 205 1 8 HELIX 20 20 GLY B 207 ARG B 216 1 10 HELIX 21 21 TYR B 224 SER B 237 1 14 HELIX 22 22 GLY B 253 LEU B 257 5 5 SHEET 1 A 7 ALA A 64 VAL A 68 0 SHEET 2 A 7 LYS A 42 ASP A 47 1 N VAL A 45 O LYS A 65 SHEET 3 A 7 VAL A 18 THR A 22 1 N ALA A 19 O ALA A 44 SHEET 4 A 7 ILE A 93 ASN A 96 1 O VAL A 95 N THR A 22 SHEET 5 A 7 GLY A 143 LEU A 148 1 O ILE A 146 N ALA A 94 SHEET 6 A 7 ILE A 186 PRO A 193 1 O CYS A 187 N ILE A 145 SHEET 7 A 7 ASP A 247 ILE A 250 1 O LEU A 248 N SER A 192 SHEET 1 B 7 ALA B 64 VAL B 68 0 SHEET 2 B 7 LYS B 42 ASP B 47 1 N VAL B 45 O PHE B 67 SHEET 3 B 7 VAL B 18 THR B 22 1 N ALA B 19 O LYS B 42 SHEET 4 B 7 ILE B 93 ASN B 96 1 O VAL B 95 N ILE B 20 SHEET 5 B 7 GLY B 143 LEU B 148 1 O ILE B 146 N ALA B 94 SHEET 6 B 7 ILE B 186 PRO B 193 1 O ASN B 189 N ASN B 147 SHEET 7 B 7 ASP B 247 ILE B 250 1 O LEU B 248 N SER B 192 SITE 1 AC1 8 SER A 97 ALA A 98 GLY A 99 LEU A 148 SITE 2 AC1 8 LYS A 167 HOH A 440 HOH A 500 HOH A 603 SITE 1 AC2 8 SER B 97 ALA B 98 GLY B 99 LEU B 148 SITE 2 AC2 8 LYS B 167 HOH B 429 HOH B 437 HOH B 453 CRYST1 87.740 87.740 117.000 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011397 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011397 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008547 0.00000