data_4NPG # _entry.id 4NPG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4NPG RCSB RCSB083491 WWPDB D_1000083491 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2014-04-23 _pdbx_database_PDB_obs_spr.pdb_id 4Q1Z _pdbx_database_PDB_obs_spr.replace_pdb_id 4NPG _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-392884 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4NPG _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-11-21 _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a hypothetical protein (BT1938) from Bacteroides thetaiotaomicron VPI-5482 at 2.50 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG)' _citation_author.ordinal 1 # _cell.entry_id 4NPG _cell.length_a 76.202 _cell.length_b 76.202 _cell.length_c 174.721 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NPG _symmetry.Int_Tables_number 154 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative lipoprotein' 44852.320 1 ? ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 3 ? ? ? ? 4 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 3 ? ? ? ? 5 water nat water 18.015 151 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)SGTAEVNPITVDVYLDITVENISTLKDLTVKFDNYDEDLHYVKEVTDNSVKVDGIIPGIYSVTVSGTAIDTENN EYYINGNSVNAALFKHGSALNIEVQGLKVSPLIFKEIYYCGSRPEKGGVYFRDQFYEIYNNSADILYLDGIYFANLTPGT ATTKLPIWPEADGNNYAYGERVWKFPGNGTEYPLAPGESCIISQFAANHQLDIYNPQSPIDGSSSEFEFN(MSE)NNPNF PDQAAYD(MSE)QHVFYQGKAE(MSE)GSIPQYLTSVFGGAYVIFRVPEGEAWDPVNDEN(MSE)KTTDLSKPNSNVYYA KIPIKYVLDAVEAVNNESK(MSE)NAKRVPGVLDAGITWVGATYCGLGIARKLSTDEEGNPIIREETGTYIYQDTNNSTD DFERGVVPV(MSE)RRNGAK(MSE)PSWNHTL ; _entity_poly.pdbx_seq_one_letter_code_can ;GMSGTAEVNPITVDVYLDITVENISTLKDLTVKFDNYDEDLHYVKEVTDNSVKVDGIIPGIYSVTVSGTAIDTENNEYYI NGNSVNAALFKHGSALNIEVQGLKVSPLIFKEIYYCGSRPEKGGVYFRDQFYEIYNNSADILYLDGIYFANLTPGTATTK LPIWPEADGNNYAYGERVWKFPGNGTEYPLAPGESCIISQFAANHQLDIYNPQSPIDGSSSEFEFNMNNPNFPDQAAYDM QHVFYQGKAEMGSIPQYLTSVFGGAYVIFRVPEGEAWDPVNDENMKTTDLSKPNSNVYYAKIPIKYVLDAVEAVNNESKM NAKRVPGVLDAGITWVGATYCGLGIARKLSTDEEGNPIIREETGTYIYQDTNNSTDDFERGVVPVMRRNGAKMPSWNHTL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-392884 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 SER n 1 4 GLY n 1 5 THR n 1 6 ALA n 1 7 GLU n 1 8 VAL n 1 9 ASN n 1 10 PRO n 1 11 ILE n 1 12 THR n 1 13 VAL n 1 14 ASP n 1 15 VAL n 1 16 TYR n 1 17 LEU n 1 18 ASP n 1 19 ILE n 1 20 THR n 1 21 VAL n 1 22 GLU n 1 23 ASN n 1 24 ILE n 1 25 SER n 1 26 THR n 1 27 LEU n 1 28 LYS n 1 29 ASP n 1 30 LEU n 1 31 THR n 1 32 VAL n 1 33 LYS n 1 34 PHE n 1 35 ASP n 1 36 ASN n 1 37 TYR n 1 38 ASP n 1 39 GLU n 1 40 ASP n 1 41 LEU n 1 42 HIS n 1 43 TYR n 1 44 VAL n 1 45 LYS n 1 46 GLU n 1 47 VAL n 1 48 THR n 1 49 ASP n 1 50 ASN n 1 51 SER n 1 52 VAL n 1 53 LYS n 1 54 VAL n 1 55 ASP n 1 56 GLY n 1 57 ILE n 1 58 ILE n 1 59 PRO n 1 60 GLY n 1 61 ILE n 1 62 TYR n 1 63 SER n 1 64 VAL n 1 65 THR n 1 66 VAL n 1 67 SER n 1 68 GLY n 1 69 THR n 1 70 ALA n 1 71 ILE n 1 72 ASP n 1 73 THR n 1 74 GLU n 1 75 ASN n 1 76 ASN n 1 77 GLU n 1 78 TYR n 1 79 TYR n 1 80 ILE n 1 81 ASN n 1 82 GLY n 1 83 ASN n 1 84 SER n 1 85 VAL n 1 86 ASN n 1 87 ALA n 1 88 ALA n 1 89 LEU n 1 90 PHE n 1 91 LYS n 1 92 HIS n 1 93 GLY n 1 94 SER n 1 95 ALA n 1 96 LEU n 1 97 ASN n 1 98 ILE n 1 99 GLU n 1 100 VAL n 1 101 GLN n 1 102 GLY n 1 103 LEU n 1 104 LYS n 1 105 VAL n 1 106 SER n 1 107 PRO n 1 108 LEU n 1 109 ILE n 1 110 PHE n 1 111 LYS n 1 112 GLU n 1 113 ILE n 1 114 TYR n 1 115 TYR n 1 116 CYS n 1 117 GLY n 1 118 SER n 1 119 ARG n 1 120 PRO n 1 121 GLU n 1 122 LYS n 1 123 GLY n 1 124 GLY n 1 125 VAL n 1 126 TYR n 1 127 PHE n 1 128 ARG n 1 129 ASP n 1 130 GLN n 1 131 PHE n 1 132 TYR n 1 133 GLU n 1 134 ILE n 1 135 TYR n 1 136 ASN n 1 137 ASN n 1 138 SER n 1 139 ALA n 1 140 ASP n 1 141 ILE n 1 142 LEU n 1 143 TYR n 1 144 LEU n 1 145 ASP n 1 146 GLY n 1 147 ILE n 1 148 TYR n 1 149 PHE n 1 150 ALA n 1 151 ASN n 1 152 LEU n 1 153 THR n 1 154 PRO n 1 155 GLY n 1 156 THR n 1 157 ALA n 1 158 THR n 1 159 THR n 1 160 LYS n 1 161 LEU n 1 162 PRO n 1 163 ILE n 1 164 TRP n 1 165 PRO n 1 166 GLU n 1 167 ALA n 1 168 ASP n 1 169 GLY n 1 170 ASN n 1 171 ASN n 1 172 TYR n 1 173 ALA n 1 174 TYR n 1 175 GLY n 1 176 GLU n 1 177 ARG n 1 178 VAL n 1 179 TRP n 1 180 LYS n 1 181 PHE n 1 182 PRO n 1 183 GLY n 1 184 ASN n 1 185 GLY n 1 186 THR n 1 187 GLU n 1 188 TYR n 1 189 PRO n 1 190 LEU n 1 191 ALA n 1 192 PRO n 1 193 GLY n 1 194 GLU n 1 195 SER n 1 196 CYS n 1 197 ILE n 1 198 ILE n 1 199 SER n 1 200 GLN n 1 201 PHE n 1 202 ALA n 1 203 ALA n 1 204 ASN n 1 205 HIS n 1 206 GLN n 1 207 LEU n 1 208 ASP n 1 209 ILE n 1 210 TYR n 1 211 ASN n 1 212 PRO n 1 213 GLN n 1 214 SER n 1 215 PRO n 1 216 ILE n 1 217 ASP n 1 218 GLY n 1 219 SER n 1 220 SER n 1 221 SER n 1 222 GLU n 1 223 PHE n 1 224 GLU n 1 225 PHE n 1 226 ASN n 1 227 MSE n 1 228 ASN n 1 229 ASN n 1 230 PRO n 1 231 ASN n 1 232 PHE n 1 233 PRO n 1 234 ASP n 1 235 GLN n 1 236 ALA n 1 237 ALA n 1 238 TYR n 1 239 ASP n 1 240 MSE n 1 241 GLN n 1 242 HIS n 1 243 VAL n 1 244 PHE n 1 245 TYR n 1 246 GLN n 1 247 GLY n 1 248 LYS n 1 249 ALA n 1 250 GLU n 1 251 MSE n 1 252 GLY n 1 253 SER n 1 254 ILE n 1 255 PRO n 1 256 GLN n 1 257 TYR n 1 258 LEU n 1 259 THR n 1 260 SER n 1 261 VAL n 1 262 PHE n 1 263 GLY n 1 264 GLY n 1 265 ALA n 1 266 TYR n 1 267 VAL n 1 268 ILE n 1 269 PHE n 1 270 ARG n 1 271 VAL n 1 272 PRO n 1 273 GLU n 1 274 GLY n 1 275 GLU n 1 276 ALA n 1 277 TRP n 1 278 ASP n 1 279 PRO n 1 280 VAL n 1 281 ASN n 1 282 ASP n 1 283 GLU n 1 284 ASN n 1 285 MSE n 1 286 LYS n 1 287 THR n 1 288 THR n 1 289 ASP n 1 290 LEU n 1 291 SER n 1 292 LYS n 1 293 PRO n 1 294 ASN n 1 295 SER n 1 296 ASN n 1 297 VAL n 1 298 TYR n 1 299 TYR n 1 300 ALA n 1 301 LYS n 1 302 ILE n 1 303 PRO n 1 304 ILE n 1 305 LYS n 1 306 TYR n 1 307 VAL n 1 308 LEU n 1 309 ASP n 1 310 ALA n 1 311 VAL n 1 312 GLU n 1 313 ALA n 1 314 VAL n 1 315 ASN n 1 316 ASN n 1 317 GLU n 1 318 SER n 1 319 LYS n 1 320 MSE n 1 321 ASN n 1 322 ALA n 1 323 LYS n 1 324 ARG n 1 325 VAL n 1 326 PRO n 1 327 GLY n 1 328 VAL n 1 329 LEU n 1 330 ASP n 1 331 ALA n 1 332 GLY n 1 333 ILE n 1 334 THR n 1 335 TRP n 1 336 VAL n 1 337 GLY n 1 338 ALA n 1 339 THR n 1 340 TYR n 1 341 CYS n 1 342 GLY n 1 343 LEU n 1 344 GLY n 1 345 ILE n 1 346 ALA n 1 347 ARG n 1 348 LYS n 1 349 LEU n 1 350 SER n 1 351 THR n 1 352 ASP n 1 353 GLU n 1 354 GLU n 1 355 GLY n 1 356 ASN n 1 357 PRO n 1 358 ILE n 1 359 ILE n 1 360 ARG n 1 361 GLU n 1 362 GLU n 1 363 THR n 1 364 GLY n 1 365 THR n 1 366 TYR n 1 367 ILE n 1 368 TYR n 1 369 GLN n 1 370 ASP n 1 371 THR n 1 372 ASN n 1 373 ASN n 1 374 SER n 1 375 THR n 1 376 ASP n 1 377 ASP n 1 378 PHE n 1 379 GLU n 1 380 ARG n 1 381 GLY n 1 382 VAL n 1 383 VAL n 1 384 PRO n 1 385 VAL n 1 386 MSE n 1 387 ARG n 1 388 ARG n 1 389 ASN n 1 390 GLY n 1 391 ALA n 1 392 LYS n 1 393 MSE n 1 394 PRO n 1 395 SER n 1 396 TRP n 1 397 ASN n 1 398 HIS n 1 399 THR n 1 400 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BT_1938 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain VPI-5482 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides thetaiotaomicron' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 226186 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8A6E6_BACTN _struct_ref.pdbx_db_accession Q8A6E6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSGTAEVNPITVDVYLDITVENISTLKDLTVKFDNYDEDLHYVKEVTDNSVKVDGIIPGIYSVTVSGTAIDTENNEYYIN GNSVNAALFKHGSALNIEVQGLKVSPLIFKEIYYCGSRPEKGGVYFRDQFYEIYNNSADILYLDGIYFANLTPGTATTKL PIWPEADGNNYAYGERVWKFPGNGTEYPLAPGESCIISQFAANHQLDIYNPQSPIDGSSSEFEFNMNNPNFPDQAAYDMQ HVFYQGKAEMGSIPQYLTSVFGGAYVIFRVPEGEAWDPVNDENMKTTDLSKPNSNVYYAKIPIKYVLDAVEAVNNESKMN AKRVPGVLDAGITWVGATYCGLGIARKLSTDEEGNPIIREETGTYIYQDTNNSTDDFERGVVPVMRRNGAKMPSWNHTL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NPG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 400 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8A6E6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 399 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 399 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4NPG _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q8A6E6 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'LEADER SEQUENCE' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4NPG # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.26 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 62.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.200M NaCl, 50.00% PEG-400, 0.1M CHES pH 9.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.pdbx_collection_date 2013-05-01 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97867 1.0 3 0.97806 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97867,0.97806 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 4NPG _reflns.d_resolution_high 2.50 _reflns.d_resolution_low 29.120 _reflns.number_obs 20991 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_netI_over_sigmaI 14.740 _reflns.percent_possible_obs 99.000 _reflns.B_iso_Wilson_estimate 70.520 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.500 2.590 14284 ? 3730 0.978 1.4 ? ? ? ? ? 92.800 1 1 2.590 2.690 14621 ? 3781 0.699 2.0 ? ? ? ? ? 100.000 2 1 2.690 2.810 15101 ? 3926 0.473 2.9 ? ? ? ? ? 100.000 3 1 2.810 2.960 14769 ? 3949 0.329 4.2 ? ? ? ? ? 99.900 4 1 2.960 3.150 14218 ? 4017 0.194 6.9 ? ? ? ? ? 99.500 5 1 3.150 3.390 15567 ? 3895 0.117 11.6 ? ? ? ? ? 99.900 6 1 3.390 3.730 15167 ? 3922 0.075 18.3 ? ? ? ? ? 99.600 7 1 3.730 4.260 14597 ? 3897 0.050 26.0 ? ? ? ? ? 99.700 8 1 4.260 5.350 14474 ? 3935 0.034 33.6 ? ? ? ? ? 99.500 9 1 5.350 ? 15346 ? 3999 0.027 39.2 ? ? ? ? ? 98.800 10 1 # _refine.entry_id 4NPG _refine.ls_d_res_high 2.5000 _refine.ls_d_res_low 29.120 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.5200 _refine.ls_number_reflns_obs 20945 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2.ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 3.SODIUM (NA) AND PEG FRAGMENTS (PEG) FROM THE CRYSTALLIZATION SOLUTION HAVE BEEN MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1807 _refine.ls_R_factor_R_work 0.1792 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2091 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1200 _refine.ls_number_reflns_R_free 1072 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 64.6397 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 4.5479 _refine.aniso_B[2][2] 4.5479 _refine.aniso_B[3][3] -9.0958 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9429 _refine.correlation_coeff_Fo_to_Fc_free 0.9292 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 162.280 _refine.B_iso_min 33.270 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4NPG _refine_analyze.Luzzati_coordinate_error_obs 0.334 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3030 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 53 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 3234 _refine_hist.d_res_high 2.5000 _refine_hist.d_res_low 29.120 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 1418 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 93 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 453 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 3167 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd 5 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 411 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 3571 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 3167 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 4303 1.160 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 3.850 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 3.020 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.5000 _refine_ls_shell.d_res_low 2.6200 _refine_ls_shell.pdbx_total_number_of_bins_used 11 _refine_ls_shell.percent_reflns_obs 99.5200 _refine_ls_shell.number_reflns_R_work 2520 _refine_ls_shell.R_factor_all 0.2215 _refine_ls_shell.R_factor_R_work 0.2193 _refine_ls_shell.R_factor_R_free 0.2565 _refine_ls_shell.percent_reflns_R_free 5.7900 _refine_ls_shell.number_reflns_R_free 155 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2675 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4NPG _struct.title 'Crystal structure of a hypothetical protein (BT1938) from Bacteroides thetaiotaomicron VPI-5482 at 2.50 A resolution' _struct.pdbx_descriptor 'Putative lipoprotein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.text ;two domains protein, PF16215 family (DUF4876), Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 4NPG # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 165 ? GLY A 169 ? PRO A 164 GLY A 168 5 ? 5 HELX_P HELX_P2 2 ASP A 217 ? SER A 221 ? ASP A 216 SER A 220 5 ? 5 HELX_P HELX_P3 3 ASP A 282 ? ASN A 284 ? ASP A 281 ASN A 283 5 ? 3 HELX_P HELX_P4 4 ASN A 373 ? ASP A 377 ? ASN A 372 ASP A 376 1 ? 5 HELX_P HELX_P5 5 ARG A 387 ? ALA A 391 ? ARG A 386 ALA A 390 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASN 226 C ? ? ? 1_555 A MSE 227 N ? ? A ASN 225 A MSE 226 1_555 ? ? ? ? ? ? ? 1.335 ? covale2 covale ? ? A MSE 227 C ? ? ? 1_555 A ASN 228 N ? ? A MSE 226 A ASN 227 1_555 ? ? ? ? ? ? ? 1.346 ? covale3 covale ? ? A ASP 239 C ? ? ? 1_555 A MSE 240 N ? ? A ASP 238 A MSE 239 1_555 ? ? ? ? ? ? ? 1.346 ? covale4 covale ? ? A MSE 240 C ? ? ? 1_555 A GLN 241 N ? ? A MSE 239 A GLN 240 1_555 ? ? ? ? ? ? ? 1.341 ? covale5 covale ? ? A GLU 250 C ? ? ? 1_555 A MSE 251 N ? ? A GLU 249 A MSE 250 1_555 ? ? ? ? ? ? ? 1.345 ? covale6 covale ? ? A MSE 251 C ? ? ? 1_555 A GLY 252 N ? ? A MSE 250 A GLY 251 1_555 ? ? ? ? ? ? ? 1.330 ? covale7 covale ? ? A ASN 284 C ? ? ? 1_555 A MSE 285 N ? ? A ASN 283 A MSE 284 1_555 ? ? ? ? ? ? ? 1.368 ? covale8 covale ? ? A MSE 285 C ? ? ? 1_555 A LYS 286 N ? ? A MSE 284 A LYS 285 1_555 ? ? ? ? ? ? ? 1.337 ? covale9 covale ? ? A LYS 319 C ? ? ? 1_555 A MSE 320 N ? ? A LYS 318 A MSE 319 1_555 ? ? ? ? ? ? ? 1.341 ? covale10 covale ? ? A MSE 320 C ? ? ? 1_555 A ASN 321 N ? ? A MSE 319 A ASN 320 1_555 ? ? ? ? ? ? ? 1.347 ? covale11 covale ? ? A VAL 385 C ? ? ? 1_555 A MSE 386 N ? ? A VAL 384 A MSE 385 1_555 ? ? ? ? ? ? ? 1.349 ? covale12 covale ? ? A MSE 386 C ? ? ? 1_555 A ARG 387 N ? ? A MSE 385 A ARG 386 1_555 ? ? ? ? ? ? ? 1.360 ? covale13 covale ? ? A LYS 392 C ? ? ? 1_555 A MSE 393 N ? ? A LYS 391 A MSE 392 1_555 ? ? ? ? ? ? ? 1.331 ? covale14 covale ? ? A MSE 393 C ? ? ? 1_555 A PRO 394 N ? ? A MSE 392 A PRO 393 1_555 ? ? ? ? ? ? ? 1.366 ? metalc1 metalc ? ? A ASP 234 OD1 ? ? ? 1_555 C NA . NA ? ? A ASP 233 A NA 401 1_555 ? ? ? ? ? ? ? 2.234 ? metalc2 metalc ? ? A ASP 239 OD1 ? ? ? 1_555 C NA . NA ? ? A ASP 238 A NA 401 1_555 ? ? ? ? ? ? ? 2.235 ? metalc3 metalc ? ? A ALA 237 O ? ? ? 1_555 C NA . NA ? ? A ALA 236 A NA 401 1_555 ? ? ? ? ? ? ? 2.236 ? metalc4 metalc ? ? A GLU 224 OE2 ? ? ? 1_555 C NA . NA ? ? A GLU 223 A NA 401 1_555 ? ? ? ? ? ? ? 2.240 ? metalc5 metalc ? ? C NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 401 A HOH 602 1_555 ? ? ? ? ? ? ? 2.244 ? metalc6 metalc ? ? A ASP 309 OD1 ? ? ? 1_555 B NA . NA ? ? A ASP 308 A NA 400 1_555 ? ? ? ? ? ? ? 2.315 ? metalc7 metalc ? ? B NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 400 A HOH 606 1_555 ? ? ? ? ? ? ? 2.326 ? metalc8 metalc ? ? B NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 400 A HOH 578 1_555 ? ? ? ? ? ? ? 2.346 ? metalc9 metalc ? ? A GLN 235 O ? ? ? 1_555 C NA . NA ? ? A GLN 234 A NA 401 1_555 ? ? ? ? ? ? ? 2.360 ? metalc10 metalc ? ? A ASP 370 OD2 ? ? ? 1_555 B NA . NA ? ? A ASP 369 A NA 400 1_555 ? ? ? ? ? ? ? 2.369 ? metalc11 metalc ? ? B NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 400 A HOH 605 1_555 ? ? ? ? ? ? ? 2.373 ? metalc12 metalc ? ? A ASN 372 OD1 ? ? ? 1_555 B NA . NA ? ? A ASN 371 A NA 400 1_555 ? ? ? ? ? ? ? 2.415 ? metalc13 metalc ? ? A ASP 370 OD1 ? ? ? 1_555 B NA . NA ? ? A ASP 369 A NA 400 1_555 ? ? ? ? ? ? ? 2.549 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 HIS 92 A . ? HIS 91 A GLY 93 A ? GLY 92 A 1 0.60 2 THR 153 A . ? THR 152 A PRO 154 A ? PRO 153 A 1 -6.78 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? C ? 2 ? D ? 4 ? E ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 43 ? GLU A 46 ? TYR A 42 GLU A 45 A 2 ILE A 24 ? ASP A 35 ? ILE A 23 ASP A 34 A 3 GLY A 60 ? ASP A 72 ? GLY A 59 ASP A 71 A 4 GLU A 77 ? LEU A 89 ? GLU A 76 LEU A 88 A 5 ALA A 95 ? VAL A 105 ? ALA A 94 VAL A 104 A 6 ILE A 11 ? ILE A 19 ? ILE A 10 ILE A 18 A 7 SER A 51 ? ILE A 57 ? SER A 50 ILE A 56 B 1 TYR A 238 ? ASP A 239 ? TYR A 237 ASP A 238 B 2 PHE A 223 ? GLU A 224 ? PHE A 222 GLU A 223 B 3 SER A 195 ? SER A 199 ? SER A 194 SER A 198 B 4 PHE A 131 ? ASN A 136 ? PHE A 130 ASN A 135 B 5 LEU A 108 ? TYR A 114 ? LEU A 107 TYR A 113 B 6 GLY A 344 ? ARG A 347 ? GLY A 343 ARG A 346 B 7 PHE A 378 ? VAL A 382 ? PHE A 377 VAL A 381 C 1 LEU A 142 ? TYR A 143 ? LEU A 141 TYR A 142 C 2 PRO A 189 ? LEU A 190 ? PRO A 188 LEU A 189 D 1 GLN A 241 ? TYR A 245 ? GLN A 240 TYR A 244 D 2 TYR A 172 ? LYS A 180 ? TYR A 171 LYS A 179 D 3 TYR A 299 ? PRO A 303 ? TYR A 298 PRO A 302 D 4 LYS A 286 ? THR A 287 ? LYS A 285 THR A 286 E 1 GLN A 241 ? TYR A 245 ? GLN A 240 TYR A 244 E 2 TYR A 172 ? LYS A 180 ? TYR A 171 LYS A 179 E 3 TYR A 148 ? LEU A 152 ? TYR A 147 LEU A 151 E 4 ALA A 265 ? PHE A 269 ? ALA A 264 PHE A 268 E 5 VAL A 307 ? GLU A 312 ? VAL A 306 GLU A 311 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 43 ? O TYR A 42 N PHE A 34 ? N PHE A 33 A 2 3 N SER A 25 ? N SER A 24 O ILE A 71 ? O ILE A 70 A 3 4 N GLY A 60 ? N GLY A 59 O LEU A 89 ? O LEU A 88 A 4 5 N GLU A 77 ? N GLU A 76 O VAL A 105 ? O VAL A 104 A 5 6 O LEU A 96 ? O LEU A 95 N ASP A 14 ? N ASP A 13 A 6 7 N ILE A 11 ? N ILE A 10 O ILE A 57 ? O ILE A 56 B 1 2 O TYR A 238 ? O TYR A 237 N GLU A 224 ? N GLU A 223 B 2 3 O PHE A 223 ? O PHE A 222 N ILE A 197 ? N ILE A 196 B 3 4 O CYS A 196 ? O CYS A 195 N ILE A 134 ? N ILE A 133 B 4 5 O GLU A 133 ? O GLU A 132 N GLU A 112 ? N GLU A 111 B 5 6 N LYS A 111 ? N LYS A 110 O ARG A 347 ? O ARG A 346 B 6 7 N ALA A 346 ? N ALA A 345 O GLU A 379 ? O GLU A 378 C 1 2 N LEU A 142 ? N LEU A 141 O LEU A 190 ? O LEU A 189 D 1 2 O GLN A 241 ? O GLN A 240 N LYS A 180 ? N LYS A 179 D 2 3 N GLY A 175 ? N GLY A 174 O ALA A 300 ? O ALA A 299 D 3 4 O TYR A 299 ? O TYR A 298 N THR A 287 ? N THR A 286 E 1 2 O GLN A 241 ? O GLN A 240 N LYS A 180 ? N LYS A 179 E 2 3 O TRP A 179 ? O TRP A 178 N PHE A 149 ? N PHE A 148 E 3 4 N TYR A 148 ? N TYR A 147 O PHE A 269 ? O PHE A 268 E 4 5 N TYR A 266 ? N TYR A 265 O VAL A 311 ? O VAL A 310 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 400' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A 401' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE PEG A 402' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE PEG A 403' AC5 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE PEG A 404' AC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE PGE A 405' AC7 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE PGE A 406' AC8 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE PGE A 407' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 309 ? ASP A 308 . ? 1_555 ? 2 AC1 6 ASP A 370 ? ASP A 369 . ? 1_555 ? 3 AC1 6 ASN A 372 ? ASN A 371 . ? 1_555 ? 4 AC1 6 HOH J . ? HOH A 578 . ? 1_555 ? 5 AC1 6 HOH J . ? HOH A 605 . ? 1_555 ? 6 AC1 6 HOH J . ? HOH A 606 . ? 1_555 ? 7 AC2 6 GLU A 224 ? GLU A 223 . ? 1_555 ? 8 AC2 6 ASP A 234 ? ASP A 233 . ? 1_555 ? 9 AC2 6 GLN A 235 ? GLN A 234 . ? 1_555 ? 10 AC2 6 ALA A 237 ? ALA A 236 . ? 1_555 ? 11 AC2 6 ASP A 239 ? ASP A 238 . ? 1_555 ? 12 AC2 6 HOH J . ? HOH A 602 . ? 1_555 ? 13 AC3 5 LYS A 160 ? LYS A 159 . ? 1_555 ? 14 AC3 5 LEU A 161 ? LEU A 160 . ? 1_555 ? 15 AC3 5 ASP A 289 ? ASP A 288 . ? 1_555 ? 16 AC3 5 SER A 291 ? SER A 290 . ? 1_555 ? 17 AC3 5 LYS A 292 ? LYS A 291 . ? 1_555 ? 18 AC4 3 LEU A 349 ? LEU A 348 . ? 1_555 ? 19 AC4 3 VAL A 382 ? VAL A 381 . ? 1_555 ? 20 AC4 3 ASN A 389 ? ASN A 388 . ? 1_555 ? 21 AC5 2 ASN A 170 ? ASN A 169 . ? 1_555 ? 22 AC5 2 TYR A 172 ? TYR A 171 . ? 1_555 ? 23 AC6 2 TYR A 172 ? TYR A 171 . ? 1_555 ? 24 AC6 2 LYS A 305 ? LYS A 304 . ? 1_555 ? 25 AC7 5 ASN A 76 ? ASN A 75 . ? 1_555 ? 26 AC7 5 TYR A 78 ? TYR A 77 . ? 1_555 ? 27 AC7 5 LYS A 104 ? LYS A 103 . ? 1_555 ? 28 AC7 5 ARG A 119 ? ARG A 118 . ? 4_655 ? 29 AC7 5 PGE I . ? PGE A 407 . ? 1_555 ? 30 AC8 6 ASN A 76 ? ASN A 75 . ? 1_555 ? 31 AC8 6 LYS A 104 ? LYS A 103 . ? 1_555 ? 32 AC8 6 SER A 106 ? SER A 105 . ? 1_555 ? 33 AC8 6 ASP A 370 ? ASP A 369 . ? 1_555 ? 34 AC8 6 ASN A 372 ? ASN A 371 . ? 1_555 ? 35 AC8 6 PGE H . ? PGE A 406 . ? 1_555 ? # _atom_sites.entry_id 4NPG _atom_sites.fract_transf_matrix[1][1] 0.013123 _atom_sites.fract_transf_matrix[1][2] 0.007577 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015153 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005723 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 SER 3 2 ? ? ? A . n A 1 4 GLY 4 3 ? ? ? A . n A 1 5 THR 5 4 ? ? ? A . n A 1 6 ALA 6 5 ? ? ? A . n A 1 7 GLU 7 6 ? ? ? A . n A 1 8 VAL 8 7 ? ? ? A . n A 1 9 ASN 9 8 ? ? ? A . n A 1 10 PRO 10 9 9 PRO PRO A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 THR 12 11 11 THR THR A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 ASP 14 13 13 ASP ASP A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 TYR 16 15 15 TYR TYR A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 ASP 18 17 17 ASP ASP A . n A 1 19 ILE 19 18 18 ILE ILE A . n A 1 20 THR 20 19 19 THR THR A . n A 1 21 VAL 21 20 20 VAL VAL A . n A 1 22 GLU 22 21 21 GLU GLU A . n A 1 23 ASN 23 22 22 ASN ASN A . n A 1 24 ILE 24 23 23 ILE ILE A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 THR 26 25 25 THR THR A . n A 1 27 LEU 27 26 26 LEU LEU A . n A 1 28 LYS 28 27 27 LYS LYS A . n A 1 29 ASP 29 28 28 ASP ASP A . n A 1 30 LEU 30 29 29 LEU LEU A . n A 1 31 THR 31 30 30 THR THR A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 LYS 33 32 32 LYS LYS A . n A 1 34 PHE 34 33 33 PHE PHE A . n A 1 35 ASP 35 34 34 ASP ASP A . n A 1 36 ASN 36 35 35 ASN ASN A . n A 1 37 TYR 37 36 36 TYR TYR A . n A 1 38 ASP 38 37 ? ? ? A . n A 1 39 GLU 39 38 ? ? ? A . n A 1 40 ASP 40 39 39 ASP ASP A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 HIS 42 41 41 HIS HIS A . n A 1 43 TYR 43 42 42 TYR TYR A . n A 1 44 VAL 44 43 43 VAL VAL A . n A 1 45 LYS 45 44 44 LYS LYS A . n A 1 46 GLU 46 45 45 GLU GLU A . n A 1 47 VAL 47 46 46 VAL VAL A . n A 1 48 THR 48 47 47 THR THR A . n A 1 49 ASP 49 48 48 ASP ASP A . n A 1 50 ASN 50 49 49 ASN ASN A . n A 1 51 SER 51 50 50 SER SER A . n A 1 52 VAL 52 51 51 VAL VAL A . n A 1 53 LYS 53 52 52 LYS LYS A . n A 1 54 VAL 54 53 53 VAL VAL A . n A 1 55 ASP 55 54 54 ASP ASP A . n A 1 56 GLY 56 55 55 GLY GLY A . n A 1 57 ILE 57 56 56 ILE ILE A . n A 1 58 ILE 58 57 57 ILE ILE A . n A 1 59 PRO 59 58 58 PRO PRO A . n A 1 60 GLY 60 59 59 GLY GLY A . n A 1 61 ILE 61 60 60 ILE ILE A . n A 1 62 TYR 62 61 61 TYR TYR A . n A 1 63 SER 63 62 62 SER SER A . n A 1 64 VAL 64 63 63 VAL VAL A . n A 1 65 THR 65 64 64 THR THR A . n A 1 66 VAL 66 65 65 VAL VAL A . n A 1 67 SER 67 66 66 SER SER A . n A 1 68 GLY 68 67 67 GLY GLY A . n A 1 69 THR 69 68 68 THR THR A . n A 1 70 ALA 70 69 69 ALA ALA A . n A 1 71 ILE 71 70 70 ILE ILE A . n A 1 72 ASP 72 71 71 ASP ASP A . n A 1 73 THR 73 72 72 THR THR A . n A 1 74 GLU 74 73 73 GLU GLU A . n A 1 75 ASN 75 74 74 ASN ASN A . n A 1 76 ASN 76 75 75 ASN ASN A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 TYR 78 77 77 TYR TYR A . n A 1 79 TYR 79 78 78 TYR TYR A . n A 1 80 ILE 80 79 79 ILE ILE A . n A 1 81 ASN 81 80 80 ASN ASN A . n A 1 82 GLY 82 81 81 GLY GLY A . n A 1 83 ASN 83 82 82 ASN ASN A . n A 1 84 SER 84 83 83 SER SER A . n A 1 85 VAL 85 84 84 VAL VAL A . n A 1 86 ASN 86 85 85 ASN ASN A . n A 1 87 ALA 87 86 86 ALA ALA A . n A 1 88 ALA 88 87 87 ALA ALA A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 PHE 90 89 89 PHE PHE A . n A 1 91 LYS 91 90 90 LYS LYS A . n A 1 92 HIS 92 91 91 HIS HIS A . n A 1 93 GLY 93 92 92 GLY GLY A . n A 1 94 SER 94 93 93 SER SER A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 LEU 96 95 95 LEU LEU A . n A 1 97 ASN 97 96 96 ASN ASN A . n A 1 98 ILE 98 97 97 ILE ILE A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 VAL 100 99 99 VAL VAL A . n A 1 101 GLN 101 100 100 GLN GLN A . n A 1 102 GLY 102 101 101 GLY GLY A . n A 1 103 LEU 103 102 102 LEU LEU A . n A 1 104 LYS 104 103 103 LYS LYS A . n A 1 105 VAL 105 104 104 VAL VAL A . n A 1 106 SER 106 105 105 SER SER A . n A 1 107 PRO 107 106 106 PRO PRO A . n A 1 108 LEU 108 107 107 LEU LEU A . n A 1 109 ILE 109 108 108 ILE ILE A . n A 1 110 PHE 110 109 109 PHE PHE A . n A 1 111 LYS 111 110 110 LYS LYS A . n A 1 112 GLU 112 111 111 GLU GLU A . n A 1 113 ILE 113 112 112 ILE ILE A . n A 1 114 TYR 114 113 113 TYR TYR A . n A 1 115 TYR 115 114 114 TYR TYR A . n A 1 116 CYS 116 115 115 CYS CYS A . n A 1 117 GLY 117 116 116 GLY GLY A . n A 1 118 SER 118 117 117 SER SER A . n A 1 119 ARG 119 118 118 ARG ARG A . n A 1 120 PRO 120 119 119 PRO PRO A . n A 1 121 GLU 121 120 120 GLU GLU A . n A 1 122 LYS 122 121 121 LYS LYS A . n A 1 123 GLY 123 122 122 GLY GLY A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 VAL 125 124 124 VAL VAL A . n A 1 126 TYR 126 125 125 TYR TYR A . n A 1 127 PHE 127 126 126 PHE PHE A . n A 1 128 ARG 128 127 127 ARG ARG A . n A 1 129 ASP 129 128 128 ASP ASP A . n A 1 130 GLN 130 129 129 GLN GLN A . n A 1 131 PHE 131 130 130 PHE PHE A . n A 1 132 TYR 132 131 131 TYR TYR A . n A 1 133 GLU 133 132 132 GLU GLU A . n A 1 134 ILE 134 133 133 ILE ILE A . n A 1 135 TYR 135 134 134 TYR TYR A . n A 1 136 ASN 136 135 135 ASN ASN A . n A 1 137 ASN 137 136 136 ASN ASN A . n A 1 138 SER 138 137 137 SER SER A . n A 1 139 ALA 139 138 138 ALA ALA A . n A 1 140 ASP 140 139 139 ASP ASP A . n A 1 141 ILE 141 140 140 ILE ILE A . n A 1 142 LEU 142 141 141 LEU LEU A . n A 1 143 TYR 143 142 142 TYR TYR A . n A 1 144 LEU 144 143 143 LEU LEU A . n A 1 145 ASP 145 144 144 ASP ASP A . n A 1 146 GLY 146 145 145 GLY GLY A . n A 1 147 ILE 147 146 146 ILE ILE A . n A 1 148 TYR 148 147 147 TYR TYR A . n A 1 149 PHE 149 148 148 PHE PHE A . n A 1 150 ALA 150 149 149 ALA ALA A . n A 1 151 ASN 151 150 150 ASN ASN A . n A 1 152 LEU 152 151 151 LEU LEU A . n A 1 153 THR 153 152 152 THR THR A . n A 1 154 PRO 154 153 153 PRO PRO A . n A 1 155 GLY 155 154 154 GLY GLY A . n A 1 156 THR 156 155 155 THR THR A . n A 1 157 ALA 157 156 156 ALA ALA A . n A 1 158 THR 158 157 157 THR THR A . n A 1 159 THR 159 158 158 THR THR A . n A 1 160 LYS 160 159 159 LYS LYS A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 PRO 162 161 161 PRO PRO A . n A 1 163 ILE 163 162 162 ILE ILE A . n A 1 164 TRP 164 163 163 TRP TRP A . n A 1 165 PRO 165 164 164 PRO PRO A . n A 1 166 GLU 166 165 165 GLU GLU A . n A 1 167 ALA 167 166 166 ALA ALA A . n A 1 168 ASP 168 167 167 ASP ASP A . n A 1 169 GLY 169 168 168 GLY GLY A . n A 1 170 ASN 170 169 169 ASN ASN A . n A 1 171 ASN 171 170 170 ASN ASN A . n A 1 172 TYR 172 171 171 TYR TYR A . n A 1 173 ALA 173 172 172 ALA ALA A . n A 1 174 TYR 174 173 173 TYR TYR A . n A 1 175 GLY 175 174 174 GLY GLY A . n A 1 176 GLU 176 175 175 GLU GLU A . n A 1 177 ARG 177 176 176 ARG ARG A . n A 1 178 VAL 178 177 177 VAL VAL A . n A 1 179 TRP 179 178 178 TRP TRP A . n A 1 180 LYS 180 179 179 LYS LYS A . n A 1 181 PHE 181 180 180 PHE PHE A . n A 1 182 PRO 182 181 181 PRO PRO A . n A 1 183 GLY 183 182 182 GLY GLY A . n A 1 184 ASN 184 183 183 ASN ASN A . n A 1 185 GLY 185 184 184 GLY GLY A . n A 1 186 THR 186 185 185 THR THR A . n A 1 187 GLU 187 186 186 GLU GLU A . n A 1 188 TYR 188 187 187 TYR TYR A . n A 1 189 PRO 189 188 188 PRO PRO A . n A 1 190 LEU 190 189 189 LEU LEU A . n A 1 191 ALA 191 190 190 ALA ALA A . n A 1 192 PRO 192 191 191 PRO PRO A . n A 1 193 GLY 193 192 192 GLY GLY A . n A 1 194 GLU 194 193 193 GLU GLU A . n A 1 195 SER 195 194 194 SER SER A . n A 1 196 CYS 196 195 195 CYS CYS A . n A 1 197 ILE 197 196 196 ILE ILE A . n A 1 198 ILE 198 197 197 ILE ILE A . n A 1 199 SER 199 198 198 SER SER A . n A 1 200 GLN 200 199 199 GLN GLN A . n A 1 201 PHE 201 200 200 PHE PHE A . n A 1 202 ALA 202 201 201 ALA ALA A . n A 1 203 ALA 203 202 202 ALA ALA A . n A 1 204 ASN 204 203 203 ASN ASN A . n A 1 205 HIS 205 204 204 HIS HIS A . n A 1 206 GLN 206 205 205 GLN GLN A . n A 1 207 LEU 207 206 206 LEU LEU A . n A 1 208 ASP 208 207 207 ASP ASP A . n A 1 209 ILE 209 208 208 ILE ILE A . n A 1 210 TYR 210 209 209 TYR TYR A . n A 1 211 ASN 211 210 210 ASN ASN A . n A 1 212 PRO 212 211 211 PRO PRO A . n A 1 213 GLN 213 212 212 GLN GLN A . n A 1 214 SER 214 213 213 SER SER A . n A 1 215 PRO 215 214 214 PRO PRO A . n A 1 216 ILE 216 215 215 ILE ILE A . n A 1 217 ASP 217 216 216 ASP ASP A . n A 1 218 GLY 218 217 217 GLY GLY A . n A 1 219 SER 219 218 218 SER SER A . n A 1 220 SER 220 219 219 SER SER A . n A 1 221 SER 221 220 220 SER SER A . n A 1 222 GLU 222 221 221 GLU GLU A . n A 1 223 PHE 223 222 222 PHE PHE A . n A 1 224 GLU 224 223 223 GLU GLU A . n A 1 225 PHE 225 224 224 PHE PHE A . n A 1 226 ASN 226 225 225 ASN ASN A . n A 1 227 MSE 227 226 226 MSE MSE A . n A 1 228 ASN 228 227 227 ASN ASN A . n A 1 229 ASN 229 228 228 ASN ASN A . n A 1 230 PRO 230 229 229 PRO PRO A . n A 1 231 ASN 231 230 230 ASN ASN A . n A 1 232 PHE 232 231 231 PHE PHE A . n A 1 233 PRO 233 232 232 PRO PRO A . n A 1 234 ASP 234 233 233 ASP ASP A . n A 1 235 GLN 235 234 234 GLN GLN A . n A 1 236 ALA 236 235 235 ALA ALA A . n A 1 237 ALA 237 236 236 ALA ALA A . n A 1 238 TYR 238 237 237 TYR TYR A . n A 1 239 ASP 239 238 238 ASP ASP A . n A 1 240 MSE 240 239 239 MSE MSE A . n A 1 241 GLN 241 240 240 GLN GLN A . n A 1 242 HIS 242 241 241 HIS HIS A . n A 1 243 VAL 243 242 242 VAL VAL A . n A 1 244 PHE 244 243 243 PHE PHE A . n A 1 245 TYR 245 244 244 TYR TYR A . n A 1 246 GLN 246 245 245 GLN GLN A . n A 1 247 GLY 247 246 246 GLY GLY A . n A 1 248 LYS 248 247 247 LYS LYS A . n A 1 249 ALA 249 248 248 ALA ALA A . n A 1 250 GLU 250 249 249 GLU GLU A . n A 1 251 MSE 251 250 250 MSE MSE A . n A 1 252 GLY 252 251 251 GLY GLY A . n A 1 253 SER 253 252 252 SER SER A . n A 1 254 ILE 254 253 253 ILE ILE A . n A 1 255 PRO 255 254 254 PRO PRO A . n A 1 256 GLN 256 255 255 GLN GLN A . n A 1 257 TYR 257 256 256 TYR TYR A . n A 1 258 LEU 258 257 257 LEU LEU A . n A 1 259 THR 259 258 258 THR THR A . n A 1 260 SER 260 259 259 SER SER A . n A 1 261 VAL 261 260 260 VAL VAL A . n A 1 262 PHE 262 261 261 PHE PHE A . n A 1 263 GLY 263 262 262 GLY GLY A . n A 1 264 GLY 264 263 263 GLY GLY A . n A 1 265 ALA 265 264 264 ALA ALA A . n A 1 266 TYR 266 265 265 TYR TYR A . n A 1 267 VAL 267 266 266 VAL VAL A . n A 1 268 ILE 268 267 267 ILE ILE A . n A 1 269 PHE 269 268 268 PHE PHE A . n A 1 270 ARG 270 269 269 ARG ARG A . n A 1 271 VAL 271 270 270 VAL VAL A . n A 1 272 PRO 272 271 271 PRO PRO A . n A 1 273 GLU 273 272 272 GLU GLU A . n A 1 274 GLY 274 273 273 GLY GLY A . n A 1 275 GLU 275 274 274 GLU GLU A . n A 1 276 ALA 276 275 275 ALA ALA A . n A 1 277 TRP 277 276 276 TRP TRP A . n A 1 278 ASP 278 277 277 ASP ASP A . n A 1 279 PRO 279 278 278 PRO PRO A . n A 1 280 VAL 280 279 279 VAL VAL A . n A 1 281 ASN 281 280 280 ASN ASN A . n A 1 282 ASP 282 281 281 ASP ASP A . n A 1 283 GLU 283 282 282 GLU GLU A . n A 1 284 ASN 284 283 283 ASN ASN A . n A 1 285 MSE 285 284 284 MSE MSE A . n A 1 286 LYS 286 285 285 LYS LYS A . n A 1 287 THR 287 286 286 THR THR A . n A 1 288 THR 288 287 287 THR THR A . n A 1 289 ASP 289 288 288 ASP ASP A . n A 1 290 LEU 290 289 289 LEU LEU A . n A 1 291 SER 291 290 290 SER SER A . n A 1 292 LYS 292 291 291 LYS LYS A . n A 1 293 PRO 293 292 292 PRO PRO A . n A 1 294 ASN 294 293 293 ASN ASN A . n A 1 295 SER 295 294 294 SER SER A . n A 1 296 ASN 296 295 295 ASN ASN A . n A 1 297 VAL 297 296 296 VAL VAL A . n A 1 298 TYR 298 297 297 TYR TYR A . n A 1 299 TYR 299 298 298 TYR TYR A . n A 1 300 ALA 300 299 299 ALA ALA A . n A 1 301 LYS 301 300 300 LYS LYS A . n A 1 302 ILE 302 301 301 ILE ILE A . n A 1 303 PRO 303 302 302 PRO PRO A . n A 1 304 ILE 304 303 303 ILE ILE A . n A 1 305 LYS 305 304 304 LYS LYS A . n A 1 306 TYR 306 305 305 TYR TYR A . n A 1 307 VAL 307 306 306 VAL VAL A . n A 1 308 LEU 308 307 307 LEU LEU A . n A 1 309 ASP 309 308 308 ASP ASP A . n A 1 310 ALA 310 309 309 ALA ALA A . n A 1 311 VAL 311 310 310 VAL VAL A . n A 1 312 GLU 312 311 311 GLU GLU A . n A 1 313 ALA 313 312 312 ALA ALA A . n A 1 314 VAL 314 313 313 VAL VAL A . n A 1 315 ASN 315 314 314 ASN ASN A . n A 1 316 ASN 316 315 315 ASN ASN A . n A 1 317 GLU 317 316 316 GLU GLU A . n A 1 318 SER 318 317 317 SER SER A . n A 1 319 LYS 319 318 318 LYS LYS A . n A 1 320 MSE 320 319 319 MSE MSE A . n A 1 321 ASN 321 320 320 ASN ASN A . n A 1 322 ALA 322 321 321 ALA ALA A . n A 1 323 LYS 323 322 322 LYS LYS A . n A 1 324 ARG 324 323 323 ARG ARG A . n A 1 325 VAL 325 324 324 VAL VAL A . n A 1 326 PRO 326 325 325 PRO PRO A . n A 1 327 GLY 327 326 326 GLY GLY A . n A 1 328 VAL 328 327 327 VAL VAL A . n A 1 329 LEU 329 328 328 LEU LEU A . n A 1 330 ASP 330 329 329 ASP ASP A . n A 1 331 ALA 331 330 330 ALA ALA A . n A 1 332 GLY 332 331 331 GLY GLY A . n A 1 333 ILE 333 332 332 ILE ILE A . n A 1 334 THR 334 333 333 THR THR A . n A 1 335 TRP 335 334 334 TRP TRP A . n A 1 336 VAL 336 335 335 VAL VAL A . n A 1 337 GLY 337 336 336 GLY GLY A . n A 1 338 ALA 338 337 337 ALA ALA A . n A 1 339 THR 339 338 338 THR THR A . n A 1 340 TYR 340 339 339 TYR TYR A . n A 1 341 CYS 341 340 340 CYS CYS A . n A 1 342 GLY 342 341 341 GLY GLY A . n A 1 343 LEU 343 342 342 LEU LEU A . n A 1 344 GLY 344 343 343 GLY GLY A . n A 1 345 ILE 345 344 344 ILE ILE A . n A 1 346 ALA 346 345 345 ALA ALA A . n A 1 347 ARG 347 346 346 ARG ARG A . n A 1 348 LYS 348 347 347 LYS LYS A . n A 1 349 LEU 349 348 348 LEU LEU A . n A 1 350 SER 350 349 349 SER SER A . n A 1 351 THR 351 350 350 THR THR A . n A 1 352 ASP 352 351 351 ASP ASP A . n A 1 353 GLU 353 352 352 GLU GLU A . n A 1 354 GLU 354 353 353 GLU GLU A . n A 1 355 GLY 355 354 354 GLY GLY A . n A 1 356 ASN 356 355 355 ASN ASN A . n A 1 357 PRO 357 356 356 PRO PRO A . n A 1 358 ILE 358 357 357 ILE ILE A . n A 1 359 ILE 359 358 358 ILE ILE A . n A 1 360 ARG 360 359 359 ARG ARG A . n A 1 361 GLU 361 360 360 GLU GLU A . n A 1 362 GLU 362 361 361 GLU GLU A . n A 1 363 THR 363 362 362 THR THR A . n A 1 364 GLY 364 363 363 GLY GLY A . n A 1 365 THR 365 364 364 THR THR A . n A 1 366 TYR 366 365 365 TYR TYR A . n A 1 367 ILE 367 366 366 ILE ILE A . n A 1 368 TYR 368 367 367 TYR TYR A . n A 1 369 GLN 369 368 368 GLN GLN A . n A 1 370 ASP 370 369 369 ASP ASP A . n A 1 371 THR 371 370 370 THR THR A . n A 1 372 ASN 372 371 371 ASN ASN A . n A 1 373 ASN 373 372 372 ASN ASN A . n A 1 374 SER 374 373 373 SER SER A . n A 1 375 THR 375 374 374 THR THR A . n A 1 376 ASP 376 375 375 ASP ASP A . n A 1 377 ASP 377 376 376 ASP ASP A . n A 1 378 PHE 378 377 377 PHE PHE A . n A 1 379 GLU 379 378 378 GLU GLU A . n A 1 380 ARG 380 379 379 ARG ARG A . n A 1 381 GLY 381 380 380 GLY GLY A . n A 1 382 VAL 382 381 381 VAL VAL A . n A 1 383 VAL 383 382 382 VAL VAL A . n A 1 384 PRO 384 383 383 PRO PRO A . n A 1 385 VAL 385 384 384 VAL VAL A . n A 1 386 MSE 386 385 385 MSE MSE A . n A 1 387 ARG 387 386 386 ARG ARG A . n A 1 388 ARG 388 387 387 ARG ARG A . n A 1 389 ASN 389 388 388 ASN ASN A . n A 1 390 GLY 390 389 389 GLY GLY A . n A 1 391 ALA 391 390 390 ALA ALA A . n A 1 392 LYS 392 391 391 LYS LYS A . n A 1 393 MSE 393 392 392 MSE MSE A . n A 1 394 PRO 394 393 393 PRO PRO A . n A 1 395 SER 395 394 394 SER SER A . n A 1 396 TRP 396 395 395 TRP TRP A . n A 1 397 ASN 397 396 396 ASN ASN A . n A 1 398 HIS 398 397 397 HIS HIS A . n A 1 399 THR 399 398 398 THR THR A . n A 1 400 LEU 400 399 399 LEU LEU A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 400 400 NA NA A . C 2 NA 1 401 401 NA NA A . D 3 PEG 1 402 402 PEG PEG A . E 3 PEG 1 403 403 PEG PEG A . F 3 PEG 1 404 404 PEG PEG A . G 4 PGE 1 405 405 PGE PGE A . H 4 PGE 1 406 406 PGE PGE A . I 4 PGE 1 407 407 PGE PGE A . J 5 HOH 1 501 408 HOH HOH A . J 5 HOH 2 502 409 HOH HOH A . J 5 HOH 3 503 410 HOH HOH A . J 5 HOH 4 504 411 HOH HOH A . J 5 HOH 5 505 412 HOH HOH A . J 5 HOH 6 506 413 HOH HOH A . J 5 HOH 7 507 414 HOH HOH A . J 5 HOH 8 508 415 HOH HOH A . J 5 HOH 9 509 416 HOH HOH A . J 5 HOH 10 510 417 HOH HOH A . J 5 HOH 11 511 418 HOH HOH A . J 5 HOH 12 512 419 HOH HOH A . J 5 HOH 13 513 420 HOH HOH A . J 5 HOH 14 514 421 HOH HOH A . J 5 HOH 15 515 422 HOH HOH A . J 5 HOH 16 516 423 HOH HOH A . J 5 HOH 17 517 424 HOH HOH A . J 5 HOH 18 518 425 HOH HOH A . J 5 HOH 19 519 426 HOH HOH A . J 5 HOH 20 520 427 HOH HOH A . J 5 HOH 21 521 428 HOH HOH A . J 5 HOH 22 522 429 HOH HOH A . J 5 HOH 23 523 430 HOH HOH A . J 5 HOH 24 524 431 HOH HOH A . J 5 HOH 25 525 432 HOH HOH A . J 5 HOH 26 526 433 HOH HOH A . J 5 HOH 27 527 434 HOH HOH A . J 5 HOH 28 528 435 HOH HOH A . J 5 HOH 29 529 436 HOH HOH A . J 5 HOH 30 530 437 HOH HOH A . J 5 HOH 31 531 438 HOH HOH A . J 5 HOH 32 532 439 HOH HOH A . J 5 HOH 33 533 440 HOH HOH A . J 5 HOH 34 534 441 HOH HOH A . J 5 HOH 35 535 442 HOH HOH A . J 5 HOH 36 536 443 HOH HOH A . J 5 HOH 37 537 444 HOH HOH A . J 5 HOH 38 538 445 HOH HOH A . J 5 HOH 39 539 446 HOH HOH A . J 5 HOH 40 540 447 HOH HOH A . J 5 HOH 41 541 448 HOH HOH A . J 5 HOH 42 542 449 HOH HOH A . J 5 HOH 43 543 450 HOH HOH A . J 5 HOH 44 544 451 HOH HOH A . J 5 HOH 45 545 452 HOH HOH A . J 5 HOH 46 546 453 HOH HOH A . J 5 HOH 47 547 454 HOH HOH A . J 5 HOH 48 548 455 HOH HOH A . J 5 HOH 49 549 456 HOH HOH A . J 5 HOH 50 550 457 HOH HOH A . J 5 HOH 51 551 458 HOH HOH A . J 5 HOH 52 552 459 HOH HOH A . J 5 HOH 53 553 460 HOH HOH A . J 5 HOH 54 554 461 HOH HOH A . J 5 HOH 55 555 462 HOH HOH A . J 5 HOH 56 556 463 HOH HOH A . J 5 HOH 57 557 464 HOH HOH A . J 5 HOH 58 558 465 HOH HOH A . J 5 HOH 59 559 466 HOH HOH A . J 5 HOH 60 560 467 HOH HOH A . J 5 HOH 61 561 468 HOH HOH A . J 5 HOH 62 562 469 HOH HOH A . J 5 HOH 63 563 470 HOH HOH A . J 5 HOH 64 564 471 HOH HOH A . J 5 HOH 65 565 472 HOH HOH A . J 5 HOH 66 566 473 HOH HOH A . J 5 HOH 67 567 474 HOH HOH A . J 5 HOH 68 568 475 HOH HOH A . J 5 HOH 69 569 476 HOH HOH A . J 5 HOH 70 570 477 HOH HOH A . J 5 HOH 71 571 478 HOH HOH A . J 5 HOH 72 572 479 HOH HOH A . J 5 HOH 73 573 480 HOH HOH A . J 5 HOH 74 574 481 HOH HOH A . J 5 HOH 75 575 482 HOH HOH A . J 5 HOH 76 576 483 HOH HOH A . J 5 HOH 77 577 484 HOH HOH A . J 5 HOH 78 578 485 HOH HOH A . J 5 HOH 79 579 486 HOH HOH A . J 5 HOH 80 580 487 HOH HOH A . J 5 HOH 81 581 488 HOH HOH A . J 5 HOH 82 582 489 HOH HOH A . J 5 HOH 83 583 490 HOH HOH A . J 5 HOH 84 584 491 HOH HOH A . J 5 HOH 85 585 492 HOH HOH A . J 5 HOH 86 586 493 HOH HOH A . J 5 HOH 87 587 494 HOH HOH A . J 5 HOH 88 588 495 HOH HOH A . J 5 HOH 89 589 496 HOH HOH A . J 5 HOH 90 590 497 HOH HOH A . J 5 HOH 91 591 498 HOH HOH A . J 5 HOH 92 592 499 HOH HOH A . J 5 HOH 93 593 500 HOH HOH A . J 5 HOH 94 594 501 HOH HOH A . J 5 HOH 95 595 502 HOH HOH A . J 5 HOH 96 596 503 HOH HOH A . J 5 HOH 97 597 504 HOH HOH A . J 5 HOH 98 598 505 HOH HOH A . J 5 HOH 99 599 506 HOH HOH A . J 5 HOH 100 600 507 HOH HOH A . J 5 HOH 101 601 508 HOH HOH A . J 5 HOH 102 602 509 HOH HOH A . J 5 HOH 103 603 510 HOH HOH A . J 5 HOH 104 604 511 HOH HOH A . J 5 HOH 105 605 512 HOH HOH A . J 5 HOH 106 606 513 HOH HOH A . J 5 HOH 107 607 514 HOH HOH A . J 5 HOH 108 608 515 HOH HOH A . J 5 HOH 109 609 516 HOH HOH A . J 5 HOH 110 610 517 HOH HOH A . J 5 HOH 111 611 518 HOH HOH A . J 5 HOH 112 612 519 HOH HOH A . J 5 HOH 113 613 520 HOH HOH A . J 5 HOH 114 614 521 HOH HOH A . J 5 HOH 115 615 522 HOH HOH A . J 5 HOH 116 616 523 HOH HOH A . J 5 HOH 117 617 524 HOH HOH A . J 5 HOH 118 618 525 HOH HOH A . J 5 HOH 119 619 526 HOH HOH A . J 5 HOH 120 620 527 HOH HOH A . J 5 HOH 121 621 528 HOH HOH A . J 5 HOH 122 622 529 HOH HOH A . J 5 HOH 123 623 530 HOH HOH A . J 5 HOH 124 624 531 HOH HOH A . J 5 HOH 125 625 532 HOH HOH A . J 5 HOH 126 626 533 HOH HOH A . J 5 HOH 127 627 534 HOH HOH A . J 5 HOH 128 628 535 HOH HOH A . J 5 HOH 129 629 536 HOH HOH A . J 5 HOH 130 630 537 HOH HOH A . J 5 HOH 131 631 538 HOH HOH A . J 5 HOH 132 632 539 HOH HOH A . J 5 HOH 133 633 540 HOH HOH A . J 5 HOH 134 634 541 HOH HOH A . J 5 HOH 135 635 542 HOH HOH A . J 5 HOH 136 636 543 HOH HOH A . J 5 HOH 137 637 544 HOH HOH A . J 5 HOH 138 638 545 HOH HOH A . J 5 HOH 139 639 546 HOH HOH A . J 5 HOH 140 640 547 HOH HOH A . J 5 HOH 141 641 548 HOH HOH A . J 5 HOH 142 642 549 HOH HOH A . J 5 HOH 143 643 550 HOH HOH A . J 5 HOH 144 644 551 HOH HOH A . J 5 HOH 145 645 552 HOH HOH A . J 5 HOH 146 646 553 HOH HOH A . J 5 HOH 147 647 554 HOH HOH A . J 5 HOH 148 648 555 HOH HOH A . J 5 HOH 149 649 556 HOH HOH A . J 5 HOH 150 650 557 HOH HOH A . J 5 HOH 151 651 558 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 227 A MSE 226 ? MET SELENOMETHIONINE 2 A MSE 240 A MSE 239 ? MET SELENOMETHIONINE 3 A MSE 251 A MSE 250 ? MET SELENOMETHIONINE 4 A MSE 285 A MSE 284 ? MET SELENOMETHIONINE 5 A MSE 320 A MSE 319 ? MET SELENOMETHIONINE 6 A MSE 386 A MSE 385 ? MET SELENOMETHIONINE 7 A MSE 393 A MSE 392 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 234 ? A ASP 233 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 OD1 ? A ASP 239 ? A ASP 238 ? 1_555 88.5 ? 2 OD1 ? A ASP 234 ? A ASP 233 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? A ALA 237 ? A ALA 236 ? 1_555 170.9 ? 3 OD1 ? A ASP 239 ? A ASP 238 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? A ALA 237 ? A ALA 236 ? 1_555 99.1 ? 4 OD1 ? A ASP 234 ? A ASP 233 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 OE2 ? A GLU 224 ? A GLU 223 ? 1_555 85.2 ? 5 OD1 ? A ASP 239 ? A ASP 238 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 OE2 ? A GLU 224 ? A GLU 223 ? 1_555 107.9 ? 6 O ? A ALA 237 ? A ALA 236 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 OE2 ? A GLU 224 ? A GLU 223 ? 1_555 97.2 ? 7 OD1 ? A ASP 234 ? A ASP 233 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? J HOH . ? A HOH 602 ? 1_555 94.2 ? 8 OD1 ? A ASP 239 ? A ASP 238 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? J HOH . ? A HOH 602 ? 1_555 85.7 ? 9 O ? A ALA 237 ? A ALA 236 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? J HOH . ? A HOH 602 ? 1_555 81.4 ? 10 OE2 ? A GLU 224 ? A GLU 223 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? J HOH . ? A HOH 602 ? 1_555 166.3 ? 11 OD1 ? A ASP 234 ? A ASP 233 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? A GLN 235 ? A GLN 234 ? 1_555 89.2 ? 12 OD1 ? A ASP 239 ? A ASP 238 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? A GLN 235 ? A GLN 234 ? 1_555 169.8 ? 13 O ? A ALA 237 ? A ALA 236 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? A GLN 235 ? A GLN 234 ? 1_555 82.4 ? 14 OE2 ? A GLU 224 ? A GLU 223 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? A GLN 235 ? A GLN 234 ? 1_555 81.7 ? 15 O ? J HOH . ? A HOH 602 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? A GLN 235 ? A GLN 234 ? 1_555 84.6 ? 16 OD1 ? A ASP 309 ? A ASP 308 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 O ? J HOH . ? A HOH 606 ? 1_555 81.1 ? 17 OD1 ? A ASP 309 ? A ASP 308 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 O ? J HOH . ? A HOH 578 ? 1_555 93.6 ? 18 O ? J HOH . ? A HOH 606 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 O ? J HOH . ? A HOH 578 ? 1_555 149.4 ? 19 OD1 ? A ASP 309 ? A ASP 308 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD2 ? A ASP 370 ? A ASP 369 ? 1_555 101.1 ? 20 O ? J HOH . ? A HOH 606 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD2 ? A ASP 370 ? A ASP 369 ? 1_555 133.6 ? 21 O ? J HOH . ? A HOH 578 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD2 ? A ASP 370 ? A ASP 369 ? 1_555 77.0 ? 22 OD1 ? A ASP 309 ? A ASP 308 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 O ? J HOH . ? A HOH 605 ? 1_555 89.6 ? 23 O ? J HOH . ? A HOH 606 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 O ? J HOH . ? A HOH 605 ? 1_555 78.6 ? 24 O ? J HOH . ? A HOH 578 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 O ? J HOH . ? A HOH 605 ? 1_555 71.2 ? 25 OD2 ? A ASP 370 ? A ASP 369 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 O ? J HOH . ? A HOH 605 ? 1_555 147.0 ? 26 OD1 ? A ASP 309 ? A ASP 308 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASN 372 ? A ASN 371 ? 1_555 168.7 ? 27 O ? J HOH . ? A HOH 606 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASN 372 ? A ASN 371 ? 1_555 92.5 ? 28 O ? J HOH . ? A HOH 578 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASN 372 ? A ASN 371 ? 1_555 87.2 ? 29 OD2 ? A ASP 370 ? A ASP 369 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASN 372 ? A ASN 371 ? 1_555 90.1 ? 30 O ? J HOH . ? A HOH 605 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASN 372 ? A ASN 371 ? 1_555 80.0 ? 31 OD1 ? A ASP 309 ? A ASP 308 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASP 370 ? A ASP 369 ? 1_555 107.3 ? 32 O ? J HOH . ? A HOH 606 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASP 370 ? A ASP 369 ? 1_555 82.3 ? 33 O ? J HOH . ? A HOH 578 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASP 370 ? A ASP 369 ? 1_555 127.6 ? 34 OD2 ? A ASP 370 ? A ASP 369 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASP 370 ? A ASP 369 ? 1_555 52.4 ? 35 O ? J HOH . ? A HOH 605 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASP 370 ? A ASP 369 ? 1_555 152.2 ? 36 OD1 ? A ASN 372 ? A ASN 371 ? 1_555 NA ? B NA . ? A NA 400 ? 1_555 OD1 ? A ASP 370 ? A ASP 369 ? 1_555 80.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-03-19 2 'Structure model' 1 1 2014-03-26 3 'Structure model' 1 2 2014-04-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 3 'Structure model' repository Obsolete ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group Other # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 55.3470 _pdbx_refine_tls.origin_y 5.9728 _pdbx_refine_tls.origin_z -0.4667 _pdbx_refine_tls.T[1][1] -0.1288 _pdbx_refine_tls.T[2][2] -0.1393 _pdbx_refine_tls.T[3][3] -0.0847 _pdbx_refine_tls.T[1][2] -0.0402 _pdbx_refine_tls.T[1][3] 0.0132 _pdbx_refine_tls.T[2][3] 0.0133 _pdbx_refine_tls.L[1][1] 1.5870 _pdbx_refine_tls.L[2][2] 1.7231 _pdbx_refine_tls.L[3][3] 0.5552 _pdbx_refine_tls.L[1][2] 0.3605 _pdbx_refine_tls.L[1][3] -0.2941 _pdbx_refine_tls.L[2][3] -0.4821 _pdbx_refine_tls.S[1][1] -0.0755 _pdbx_refine_tls.S[2][2] 0.0512 _pdbx_refine_tls.S[3][3] 0.0243 _pdbx_refine_tls.S[1][2] 0.1627 _pdbx_refine_tls.S[1][3] 0.0287 _pdbx_refine_tls.S[2][3] -0.2992 _pdbx_refine_tls.S[2][1] -0.1181 _pdbx_refine_tls.S[3][1] 0.0836 _pdbx_refine_tls.S[3][2] 0.0494 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 9 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 399 _pdbx_refine_tls_group.selection_details '{ A|9 - A|399 }' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOLPROBITY 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu validation http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE . ? package 'Wolfgang Kabsch' ? 'data processing' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 BUSTER-TNT 2.10.0 ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 XSCALE . ? ? ? ? 'data scaling' ? ? ? 9 SHELXD . ? ? ? ? phasing ? ? ? 10 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.entry_id 4NPG _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 89 ? ? -137.73 -42.74 2 1 TYR A 187 ? ? -117.88 78.68 3 1 TYR A 209 ? ? -109.16 -90.32 4 1 LYS A 318 ? ? -94.91 43.06 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 10 ? CG1 ? A ILE 11 CG1 2 1 Y 1 A ILE 10 ? CG2 ? A ILE 11 CG2 3 1 Y 1 A ILE 10 ? CD1 ? A ILE 11 CD1 4 1 Y 1 A ASP 34 ? CG ? A ASP 35 CG 5 1 Y 1 A ASP 34 ? OD1 ? A ASP 35 OD1 6 1 Y 1 A ASP 34 ? OD2 ? A ASP 35 OD2 7 1 Y 1 A TYR 36 ? CG ? A TYR 37 CG 8 1 Y 1 A TYR 36 ? CD1 ? A TYR 37 CD1 9 1 Y 1 A TYR 36 ? CD2 ? A TYR 37 CD2 10 1 Y 1 A TYR 36 ? CE1 ? A TYR 37 CE1 11 1 Y 1 A TYR 36 ? CE2 ? A TYR 37 CE2 12 1 Y 1 A TYR 36 ? CZ ? A TYR 37 CZ 13 1 Y 1 A TYR 36 ? OH ? A TYR 37 OH 14 1 Y 1 A LEU 40 ? CG ? A LEU 41 CG 15 1 Y 1 A LEU 40 ? CD1 ? A LEU 41 CD1 16 1 Y 1 A LEU 40 ? CD2 ? A LEU 41 CD2 17 1 Y 1 A LYS 52 ? CG ? A LYS 53 CG 18 1 Y 1 A LYS 52 ? CD ? A LYS 53 CD 19 1 Y 1 A LYS 52 ? CE ? A LYS 53 CE 20 1 Y 1 A LYS 52 ? NZ ? A LYS 53 NZ 21 1 Y 1 A LYS 90 ? CG ? A LYS 91 CG 22 1 Y 1 A LYS 90 ? CD ? A LYS 91 CD 23 1 Y 1 A LYS 90 ? CE ? A LYS 91 CE 24 1 Y 1 A LYS 90 ? NZ ? A LYS 91 NZ 25 1 Y 1 A GLU 165 ? CG ? A GLU 166 CG 26 1 Y 1 A GLU 165 ? CD ? A GLU 166 CD 27 1 Y 1 A GLU 165 ? OE1 ? A GLU 166 OE1 28 1 Y 1 A GLU 165 ? OE2 ? A GLU 166 OE2 29 1 Y 1 A LYS 391 ? CG ? A LYS 392 CG 30 1 Y 1 A LYS 391 ? CD ? A LYS 392 CD 31 1 Y 1 A LYS 391 ? CE ? A LYS 392 CE 32 1 Y 1 A LYS 391 ? NZ ? A LYS 392 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A SER 2 ? A SER 3 4 1 Y 1 A GLY 3 ? A GLY 4 5 1 Y 1 A THR 4 ? A THR 5 6 1 Y 1 A ALA 5 ? A ALA 6 7 1 Y 1 A GLU 6 ? A GLU 7 8 1 Y 1 A VAL 7 ? A VAL 8 9 1 Y 1 A ASN 8 ? A ASN 9 10 1 Y 1 A ASP 37 ? A ASP 38 11 1 Y 1 A GLU 38 ? A GLU 39 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 'DI(HYDROXYETHYL)ETHER' PEG 4 'TRIETHYLENE GLYCOL' PGE 5 water HOH #