HEADER MEMBRANE PROTEIN 21-NOV-13 4NPJ TITLE EXTENDED-SYNAPTOTAGMIN 2, C2A- AND C2B-DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTENDED SYNAPTOTAGMIN-2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C2 AND C2B DOMAINS (UNP RESIDUES 363-660); COMPND 5 SYNONYM: E-SYT2, CHR2SYT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESYT2, EXTENDED-SYNAPTOTAGMIN 2, FAM62B, KIAA1228; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CALCIUM/PHOSPHOLIPID BINDING PROTEIN, C2 DOMAIN, MEMBRANE TRAFFIC, KEYWDS 2 PROTEIN TARGETING, PLASMA MEMBRANE, MEMBRANE PROTEIN, ER TO PLASMA KEYWDS 3 MEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR D.R.TOMCHICK,J.RIZO,J.XU REVDAT 4 28-FEB-24 4NPJ 1 REMARK SEQADV LINK REVDAT 3 22-NOV-17 4NPJ 1 REMARK REVDAT 2 19-MAR-14 4NPJ 1 JRNL REVDAT 1 29-JAN-14 4NPJ 0 JRNL AUTH J.XU,T.BACAJ,A.ZHOU,D.R.TOMCHICK,T.C.SUDHOF,J.RIZO JRNL TITL STRUCTURE AND CA(2+)-BINDING PROPERTIES OF THE TANDEM C2 JRNL TITL 2 DOMAINS OF E-SYT2. JRNL REF STRUCTURE V. 22 269 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 24373768 JRNL DOI 10.1016/J.STR.2013.11.011 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.W.MIN,W.P.CHANG,T.C.SUDHOF REMARK 1 TITL E-SYTS, A FAMILY OF MEMBRANOUS CA2+-SENSOR PROTEINS WITH REMARK 1 TITL 2 MULTIPLE C2 DOMAINS. REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 104 3823 2007 REMARK 1 REFN ISSN 0027-8424 REMARK 1 PMID 17360437 REMARK 1 DOI 10.1073/PNAS.0611725104 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 48422 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.9006 - 5.5010 0.99 2662 124 0.1726 0.2176 REMARK 3 2 5.5010 - 4.3678 1.00 2618 169 0.1430 0.1770 REMARK 3 3 4.3678 - 3.8161 1.00 2645 149 0.1582 0.1921 REMARK 3 4 3.8161 - 3.4674 1.00 2600 150 0.1858 0.2284 REMARK 3 5 3.4674 - 3.2190 1.00 2654 144 0.2149 0.2704 REMARK 3 6 3.2190 - 3.0292 1.00 2621 130 0.2293 0.2312 REMARK 3 7 3.0292 - 2.8776 1.00 2666 136 0.2315 0.2763 REMARK 3 8 2.8776 - 2.7523 1.00 2596 143 0.2451 0.2920 REMARK 3 9 2.7523 - 2.6464 1.00 2674 131 0.2451 0.2542 REMARK 3 10 2.6464 - 2.5551 1.00 2625 134 0.2552 0.3088 REMARK 3 11 2.5551 - 2.4752 1.00 2618 133 0.2562 0.3152 REMARK 3 12 2.4752 - 2.4045 1.00 2626 132 0.2528 0.3130 REMARK 3 13 2.4045 - 2.3412 1.00 2636 162 0.2610 0.3258 REMARK 3 14 2.3412 - 2.2840 0.99 2616 127 0.2719 0.2936 REMARK 3 15 2.2840 - 2.2321 0.97 2527 148 0.2824 0.3389 REMARK 3 16 2.2321 - 2.1846 0.92 2422 143 0.2937 0.3324 REMARK 3 17 2.1846 - 2.1409 0.84 2169 105 0.2910 0.3271 REMARK 3 18 2.1409 - 2.1005 0.74 1979 108 0.2946 0.3929 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4735 REMARK 3 ANGLE : 0.904 6400 REMARK 3 CHIRALITY : 0.034 721 REMARK 3 PLANARITY : 0.004 835 REMARK 3 DIHEDRAL : 14.858 1820 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 363 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7713 -14.7180 -34.7645 REMARK 3 T TENSOR REMARK 3 T11: 1.0683 T22: 0.4081 REMARK 3 T33: 0.3668 T12: -0.2193 REMARK 3 T13: 0.1319 T23: -0.0638 REMARK 3 L TENSOR REMARK 3 L11: 2.0294 L22: -0.2390 REMARK 3 L33: 3.0794 L12: 0.3915 REMARK 3 L13: -1.6642 L23: -0.8742 REMARK 3 S TENSOR REMARK 3 S11: 0.0035 S12: -0.1705 S13: -0.2918 REMARK 3 S21: -0.5296 S22: 0.3407 S23: -0.0336 REMARK 3 S31: -1.4824 S32: -0.1756 S33: -0.0791 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 385 THROUGH 413 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4076 -17.2382 25.1750 REMARK 3 T TENSOR REMARK 3 T11: 0.5801 T22: 1.4239 REMARK 3 T33: 0.3915 T12: 0.1746 REMARK 3 T13: -0.0240 T23: -0.0852 REMARK 3 L TENSOR REMARK 3 L11: 0.8627 L22: 0.6886 REMARK 3 L33: 0.2538 L12: -1.1500 REMARK 3 L13: -1.0617 L23: 0.8080 REMARK 3 S TENSOR REMARK 3 S11: -0.5707 S12: -0.6669 S13: -0.1086 REMARK 3 S21: 0.7196 S22: 0.5097 S23: 0.1302 REMARK 3 S31: 0.4564 S32: 1.5895 S33: 0.0423 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 414 THROUGH 535 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4623 -16.5501 10.5215 REMARK 3 T TENSOR REMARK 3 T11: 0.3155 T22: 1.3709 REMARK 3 T33: 0.3836 T12: 0.0982 REMARK 3 T13: -0.0048 T23: -0.0658 REMARK 3 L TENSOR REMARK 3 L11: 3.6970 L22: 1.5554 REMARK 3 L33: 4.7632 L12: -0.2139 REMARK 3 L13: -2.1427 L23: 1.8036 REMARK 3 S TENSOR REMARK 3 S11: -0.3361 S12: -0.8848 S13: 0.0923 REMARK 3 S21: 0.2417 S22: 0.4585 S23: -0.2603 REMARK 3 S31: -0.4698 S32: 0.7832 S33: -0.1394 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 536 THROUGH 659 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5512 -32.0166 -16.6409 REMARK 3 T TENSOR REMARK 3 T11: 0.1966 T22: 0.5816 REMARK 3 T33: 0.5594 T12: 0.1029 REMARK 3 T13: 0.1052 T23: 0.0440 REMARK 3 L TENSOR REMARK 3 L11: 3.7641 L22: 2.0984 REMARK 3 L33: 6.4061 L12: -0.0301 REMARK 3 L13: 0.1869 L23: 1.3789 REMARK 3 S TENSOR REMARK 3 S11: -0.0918 S12: -0.2609 S13: -0.6770 REMARK 3 S21: -0.1158 S22: 0.2217 S23: -0.1232 REMARK 3 S31: 0.6161 S32: 0.9863 S33: -0.0651 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 364 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1741 -10.0976 12.5902 REMARK 3 T TENSOR REMARK 3 T11: 0.6508 T22: 0.8193 REMARK 3 T33: 0.3296 T12: 0.1921 REMARK 3 T13: -0.0227 T23: -0.0999 REMARK 3 L TENSOR REMARK 3 L11: 0.1172 L22: 1.0969 REMARK 3 L33: 2.7809 L12: -0.4746 REMARK 3 L13: -1.1225 L23: 1.9327 REMARK 3 S TENSOR REMARK 3 S11: -0.2016 S12: -0.1650 S13: 0.0802 REMARK 3 S21: 0.0185 S22: 0.0466 S23: -0.0605 REMARK 3 S31: -0.9798 S32: 0.4094 S33: 0.0658 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 385 THROUGH 466 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0062 -24.4256 -33.3580 REMARK 3 T TENSOR REMARK 3 T11: 0.4035 T22: 0.4580 REMARK 3 T33: 0.3992 T12: 0.0971 REMARK 3 T13: 0.0227 T23: -0.0491 REMARK 3 L TENSOR REMARK 3 L11: 4.2296 L22: 2.5906 REMARK 3 L33: 6.4133 L12: 0.0742 REMARK 3 L13: -1.6655 L23: 0.4375 REMARK 3 S TENSOR REMARK 3 S11: 0.0848 S12: 0.7105 S13: -0.3878 REMARK 3 S21: -0.6062 S22: -0.2482 S23: -0.2570 REMARK 3 S31: -0.8134 S32: -0.3660 S33: 0.0716 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 467 THROUGH 546 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6402 -20.1125 -25.2579 REMARK 3 T TENSOR REMARK 3 T11: 0.5498 T22: 0.7435 REMARK 3 T33: 0.3919 T12: 0.3554 REMARK 3 T13: -0.0737 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 3.0696 L22: 1.4734 REMARK 3 L33: 4.4849 L12: 0.3509 REMARK 3 L13: -1.3624 L23: 0.8919 REMARK 3 S TENSOR REMARK 3 S11: 0.0374 S12: 0.6492 S13: -0.0762 REMARK 3 S21: -0.6040 S22: -0.2555 S23: 0.2155 REMARK 3 S31: -1.0349 S32: -1.4584 S33: 0.0699 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 547 THROUGH 659 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5806 -30.7108 -0.5741 REMARK 3 T TENSOR REMARK 3 T11: 0.0787 T22: 0.9511 REMARK 3 T33: 0.5128 T12: 0.0573 REMARK 3 T13: 0.1247 T23: 0.2312 REMARK 3 L TENSOR REMARK 3 L11: 3.8618 L22: 2.1990 REMARK 3 L33: 4.1755 L12: 0.4276 REMARK 3 L13: -1.1970 L23: 1.9488 REMARK 3 S TENSOR REMARK 3 S11: -0.1785 S12: -1.2539 S13: -0.8159 REMARK 3 S21: 0.0712 S22: -0.2435 S23: 0.1632 REMARK 3 S31: 0.7491 S32: -0.8106 S33: 0.1452 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NPJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083494. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-AUG-12; 18-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 4.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 19-ID; 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.38592; 0.97912 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111); REMARK 200 SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : MONOCHROMATOR; MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R; ADSC QUANTUM REMARK 200 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48539 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.50100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.460 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.25 M LICL, 0.1 M SODIUM ACETATE, REMARK 280 0.125 M NACL, 2.5% GLYCEROL, 25% ETHYLENE GLYCOL, PH 4.9, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 113.19750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 169.79625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.59875 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 56.59875 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 362 REMARK 465 LYS A 552 REMARK 465 LYS A 553 REMARK 465 ILE A 554 REMARK 465 SER A 555 REMARK 465 SER A 556 REMARK 465 ARG A 660 REMARK 465 GLY B 362 REMARK 465 ASN B 363 REMARK 465 TYR B 403 REMARK 465 LEU B 404 REMARK 465 LYS B 405 REMARK 465 GLY B 406 REMARK 465 LEU B 407 REMARK 465 VAL B 408 REMARK 465 LYS B 409 REMARK 465 SER B 550 REMARK 465 GLY B 551 REMARK 465 LYS B 552 REMARK 465 LYS B 553 REMARK 465 ILE B 554 REMARK 465 SER B 555 REMARK 465 SER B 556 REMARK 465 ARG B 660 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 408 162.86 65.27 REMARK 500 HIS A 449 92.60 -163.64 REMARK 500 ASP A 464 -130.01 -106.76 REMARK 500 ARG A 483 -48.09 67.61 REMARK 500 ASP A 543 -70.18 -83.10 REMARK 500 SER A 550 144.52 67.83 REMARK 500 ASN B 433 114.81 -161.78 REMARK 500 ASP B 464 -136.07 -96.57 REMARK 500 ARG B 483 -43.33 71.97 REMARK 500 SER B 544 -178.53 -173.37 REMARK 500 HIS B 568 -74.23 -82.87 REMARK 500 GLN B 610 73.69 46.54 REMARK 500 ASP B 628 28.59 49.29 REMARK 500 SER B 640 -153.52 -121.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 701 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 581 OE2 REMARK 620 2 HOH A 968 O 74.1 REMARK 620 3 ASP B 462 O 89.3 156.6 REMARK 620 4 ASP B 464 O 166.3 111.7 81.3 REMARK 620 5 ASP B 466 OD1 77.1 83.0 77.2 91.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 704 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NPK RELATED DB: PDB DBREF 4NPJ A 363 660 UNP A0FGR8 ESYT2_HUMAN 363 660 DBREF 4NPJ B 363 660 UNP A0FGR8 ESYT2_HUMAN 363 660 SEQADV 4NPJ GLY A 362 UNP A0FGR8 EXPRESSION TAG SEQADV 4NPJ GLY B 362 UNP A0FGR8 EXPRESSION TAG SEQRES 1 A 299 GLY ASN ARG ILE THR VAL PRO LEU VAL SER GLU VAL GLN SEQRES 2 A 299 ILE ALA GLN LEU ARG PHE PRO VAL PRO LYS GLY VAL LEU SEQRES 3 A 299 ARG ILE HIS PHE ILE GLU ALA GLN ASP LEU GLN GLY LYS SEQRES 4 A 299 ASP THR TYR LEU LYS GLY LEU VAL LYS GLY LYS SER ASP SEQRES 5 A 299 PRO TYR GLY ILE ILE ARG VAL GLY ASN GLN ILE PHE GLN SEQRES 6 A 299 SER ARG VAL ILE LYS GLU ASN LEU SER PRO LYS TRP ASN SEQRES 7 A 299 GLU VAL TYR GLU ALA LEU VAL TYR GLU HIS PRO GLY GLN SEQRES 8 A 299 GLU LEU GLU ILE GLU LEU PHE ASP GLU ASP PRO ASP LYS SEQRES 9 A 299 ASP ASP PHE LEU GLY SER LEU MET ILE ASP LEU ILE GLU SEQRES 10 A 299 VAL GLU LYS GLU ARG LEU LEU ASP GLU TRP PHE THR LEU SEQRES 11 A 299 ASP GLU VAL PRO LYS GLY LYS LEU HIS LEU ARG LEU GLU SEQRES 12 A 299 TRP LEU THR LEU MET PRO ASN ALA SER ASN LEU ASP LYS SEQRES 13 A 299 VAL LEU THR ASP ILE LYS ALA ASP LYS ASP GLN ALA ASN SEQRES 14 A 299 ASP GLY LEU SER SER ALA LEU LEU ILE LEU TYR LEU ASP SEQRES 15 A 299 SER ALA ARG ASN LEU PRO SER GLY LYS LYS ILE SER SER SEQRES 16 A 299 ASN PRO ASN PRO VAL VAL GLN MET SER VAL GLY HIS LYS SEQRES 17 A 299 ALA GLN GLU SER LYS ILE ARG TYR LYS THR ASN GLU PRO SEQRES 18 A 299 VAL TRP GLU GLU ASN PHE THR PHE PHE ILE HIS ASN PRO SEQRES 19 A 299 LYS ARG GLN ASP LEU GLU VAL GLU VAL ARG ASP GLU GLN SEQRES 20 A 299 HIS GLN CYS SER LEU GLY ASN LEU LYS VAL PRO LEU SER SEQRES 21 A 299 GLN LEU LEU THR SER GLU ASP MET THR VAL SER GLN ARG SEQRES 22 A 299 PHE GLN LEU SER ASN SER GLY PRO ASN SER THR ILE LYS SEQRES 23 A 299 MET LYS ILE ALA LEU ARG VAL LEU HIS LEU GLU LYS ARG SEQRES 1 B 299 GLY ASN ARG ILE THR VAL PRO LEU VAL SER GLU VAL GLN SEQRES 2 B 299 ILE ALA GLN LEU ARG PHE PRO VAL PRO LYS GLY VAL LEU SEQRES 3 B 299 ARG ILE HIS PHE ILE GLU ALA GLN ASP LEU GLN GLY LYS SEQRES 4 B 299 ASP THR TYR LEU LYS GLY LEU VAL LYS GLY LYS SER ASP SEQRES 5 B 299 PRO TYR GLY ILE ILE ARG VAL GLY ASN GLN ILE PHE GLN SEQRES 6 B 299 SER ARG VAL ILE LYS GLU ASN LEU SER PRO LYS TRP ASN SEQRES 7 B 299 GLU VAL TYR GLU ALA LEU VAL TYR GLU HIS PRO GLY GLN SEQRES 8 B 299 GLU LEU GLU ILE GLU LEU PHE ASP GLU ASP PRO ASP LYS SEQRES 9 B 299 ASP ASP PHE LEU GLY SER LEU MET ILE ASP LEU ILE GLU SEQRES 10 B 299 VAL GLU LYS GLU ARG LEU LEU ASP GLU TRP PHE THR LEU SEQRES 11 B 299 ASP GLU VAL PRO LYS GLY LYS LEU HIS LEU ARG LEU GLU SEQRES 12 B 299 TRP LEU THR LEU MET PRO ASN ALA SER ASN LEU ASP LYS SEQRES 13 B 299 VAL LEU THR ASP ILE LYS ALA ASP LYS ASP GLN ALA ASN SEQRES 14 B 299 ASP GLY LEU SER SER ALA LEU LEU ILE LEU TYR LEU ASP SEQRES 15 B 299 SER ALA ARG ASN LEU PRO SER GLY LYS LYS ILE SER SER SEQRES 16 B 299 ASN PRO ASN PRO VAL VAL GLN MET SER VAL GLY HIS LYS SEQRES 17 B 299 ALA GLN GLU SER LYS ILE ARG TYR LYS THR ASN GLU PRO SEQRES 18 B 299 VAL TRP GLU GLU ASN PHE THR PHE PHE ILE HIS ASN PRO SEQRES 19 B 299 LYS ARG GLN ASP LEU GLU VAL GLU VAL ARG ASP GLU GLN SEQRES 20 B 299 HIS GLN CYS SER LEU GLY ASN LEU LYS VAL PRO LEU SER SEQRES 21 B 299 GLN LEU LEU THR SER GLU ASP MET THR VAL SER GLN ARG SEQRES 22 B 299 PHE GLN LEU SER ASN SER GLY PRO ASN SER THR ILE LYS SEQRES 23 B 299 MET LYS ILE ALA LEU ARG VAL LEU HIS LEU GLU LYS ARG HET CL A 801 1 HET CL A 802 1 HET NA B 701 1 HET CL B 702 1 HET ACT B 703 7 HET ACT B 704 7 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM ACT ACETATE ION FORMUL 3 CL 3(CL 1-) FORMUL 5 NA NA 1+ FORMUL 7 ACT 2(C2 H3 O2 1-) FORMUL 9 HOH *148(H2 O) HELIX 1 1 LEU A 476 ARG A 483 1 8 HELIX 2 2 ASN A 514 ASP A 525 1 12 HELIX 3 3 LEU A 620 THR A 625 1 6 HELIX 4 4 SER A 626 ASP A 628 5 3 HELIX 5 5 LEU B 476 ARG B 483 1 8 HELIX 6 6 ASN B 514 ALA B 524 1 11 HELIX 7 7 SER B 621 ASP B 628 5 8 SHEET 1 A 6 LYS A 437 VAL A 446 0 SHEET 2 A 6 GLY A 385 GLN A 395 -1 N ILE A 389 O TYR A 442 SHEET 3 A 6 LYS A 498 MET A 509 -1 O HIS A 500 N GLU A 393 SHEET 4 A 6 THR A 645 HIS A 656 -1 O HIS A 656 N THR A 507 SHEET 5 A 6 ALA A 536 ARG A 546 -1 N SER A 544 O LYS A 647 SHEET 6 A 6 VAL A 583 ILE A 592 -1 O GLU A 586 N LEU A 542 SHEET 1 B 4 LEU A 484 THR A 490 0 SHEET 2 B 4 LYS A 498 MET A 509 -1 O LEU A 499 N PHE A 489 SHEET 3 B 4 THR A 645 HIS A 656 -1 O HIS A 656 N THR A 507 SHEET 4 B 4 THR A 630 GLN A 636 -1 N PHE A 635 O ILE A 646 SHEET 1 C 4 GLN A 423 GLN A 426 0 SHEET 2 C 4 PRO A 414 VAL A 420 -1 N ILE A 418 O PHE A 425 SHEET 3 C 4 GLU A 453 ASP A 460 -1 O GLU A 455 N ARG A 419 SHEET 4 C 4 ASP A 467 ASP A 475 -1 O LEU A 469 N LEU A 458 SHEET 1 D 4 LYS A 569 GLU A 572 0 SHEET 2 D 4 PRO A 560 VAL A 566 -1 N MET A 564 O GLN A 571 SHEET 3 D 4 ASP A 599 ASP A 606 -1 O GLU A 601 N SER A 565 SHEET 4 D 4 SER A 612 PRO A 619 -1 O LEU A 613 N VAL A 604 SHEET 1 E 6 LYS B 437 VAL B 446 0 SHEET 2 E 6 GLY B 385 GLN B 395 -1 N ILE B 389 O TYR B 442 SHEET 3 E 6 LYS B 498 MET B 509 -1 O HIS B 500 N GLU B 393 SHEET 4 E 6 THR B 645 LEU B 657 -1 O HIS B 656 N THR B 507 SHEET 5 E 6 ALA B 536 ARG B 546 -1 N ILE B 539 O ALA B 651 SHEET 6 E 6 VAL B 583 ILE B 592 -1 O GLU B 586 N LEU B 542 SHEET 1 F 4 LEU B 484 THR B 490 0 SHEET 2 F 4 LYS B 498 MET B 509 -1 O LEU B 503 N LEU B 485 SHEET 3 F 4 THR B 645 LEU B 657 -1 O HIS B 656 N THR B 507 SHEET 4 F 4 THR B 630 GLN B 636 -1 N VAL B 631 O ILE B 650 SHEET 1 G 4 GLN B 423 GLN B 426 0 SHEET 2 G 4 PRO B 414 VAL B 420 -1 N ILE B 418 O PHE B 425 SHEET 3 G 4 GLU B 453 ASP B 460 -1 O GLU B 455 N ARG B 419 SHEET 4 G 4 ASP B 467 ASP B 475 -1 O LEU B 469 N LEU B 458 SHEET 1 H 4 ALA B 570 GLU B 572 0 SHEET 2 H 4 PRO B 560 SER B 565 -1 N MET B 564 O GLN B 571 SHEET 3 H 4 ASP B 599 ASP B 606 -1 O GLU B 601 N SER B 565 SHEET 4 H 4 CYS B 611 PRO B 619 -1 O LEU B 616 N VAL B 602 LINK OE2 GLU A 581 NA NA B 701 1555 1555 2.39 LINK O HOH A 968 NA NA B 701 1555 1555 2.47 LINK O ASP B 462 NA NA B 701 1555 1555 2.99 LINK O ASP B 464 NA NA B 701 1555 1555 2.41 LINK OD1 ASP B 466 NA NA B 701 1555 1555 2.51 SITE 1 AC1 3 LEU A 369 ARG A 419 GLU B 585 SITE 1 AC2 3 LYS A 569 PHE A 591 HOH A 922 SITE 1 AC3 6 ARG A 546 GLU A 581 HOH A 968 ASP B 462 SITE 2 AC3 6 ASP B 464 ASP B 466 SITE 1 AC4 2 LYS B 569 PHE B 591 SITE 1 AC5 2 TYR B 415 PHE B 459 SITE 1 AC6 5 GLU B 443 ASP B 531 GLY B 532 PHE B 591 SITE 2 AC6 5 HOH B 842 CRYST1 62.300 62.300 226.395 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016051 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016051 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004417 0.00000