data_4NQT # _entry.id 4NQT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NQT pdb_00004nqt 10.2210/pdb4nqt/pdb RCSB RCSB083540 ? ? WWPDB D_1000083540 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4NQS . unspecified PDB 4NQU . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4NQT _pdbx_database_status.recvd_initial_deposition_date 2013-11-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Eigenbrot, C.' 1 'Ultsch, M.' 2 # _citation.id primary _citation.title 'Antiparallel Conformation of Knob and Hole Aglycosylated Half-Antibody Homodimers Is Mediated by a CH2-CH3 Hydrophobic Interaction.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 426 _citation.page_first 1947 _citation.page_last 1957 _citation.year 2014 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24576605 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2014.02.015 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Elliott, J.M.' 1 ? primary 'Ultsch, M.' 2 ? primary 'Lee, J.' 3 ? primary 'Tong, R.' 4 ? primary 'Takeda, K.' 5 ? primary 'Spiess, C.' 6 ? primary 'Eigenbrot, C.' 7 ? primary 'Scheer, J.M.' 8 ? # _cell.entry_id 4NQT _cell.length_a 75.468 _cell.length_b 44.478 _cell.length_c 68.895 _cell.angle_alpha 90.00 _cell.angle_beta 106.86 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NQT _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ig gamma-1 chain C region' 24000.146 1 ? T366S/L368A/Y407V 'UNP residues 118-330' ? 2 water nat water 18.015 106 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'hole Fc T366S/L368A/Y407V' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWL NGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLSCAVKGFYPSDIAVEWESNGQPENNYKTT PPVLDSDGSFFLVSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK ; _entity_poly.pdbx_seq_one_letter_code_can ;LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWL NGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLSCAVKGFYPSDIAVEWESNGQPENNYKTT PPVLDSDGSFFLVSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 GLY n 1 3 GLY n 1 4 PRO n 1 5 SER n 1 6 VAL n 1 7 PHE n 1 8 LEU n 1 9 PHE n 1 10 PRO n 1 11 PRO n 1 12 LYS n 1 13 PRO n 1 14 LYS n 1 15 ASP n 1 16 THR n 1 17 LEU n 1 18 MET n 1 19 ILE n 1 20 SER n 1 21 ARG n 1 22 THR n 1 23 PRO n 1 24 GLU n 1 25 VAL n 1 26 THR n 1 27 CYS n 1 28 VAL n 1 29 VAL n 1 30 VAL n 1 31 ASP n 1 32 VAL n 1 33 SER n 1 34 HIS n 1 35 GLU n 1 36 ASP n 1 37 PRO n 1 38 GLU n 1 39 VAL n 1 40 LYS n 1 41 PHE n 1 42 ASN n 1 43 TRP n 1 44 TYR n 1 45 VAL n 1 46 ASP n 1 47 GLY n 1 48 VAL n 1 49 GLU n 1 50 VAL n 1 51 HIS n 1 52 ASN n 1 53 ALA n 1 54 LYS n 1 55 THR n 1 56 LYS n 1 57 PRO n 1 58 ARG n 1 59 GLU n 1 60 GLU n 1 61 GLN n 1 62 TYR n 1 63 ASN n 1 64 SER n 1 65 THR n 1 66 TYR n 1 67 ARG n 1 68 VAL n 1 69 VAL n 1 70 SER n 1 71 VAL n 1 72 LEU n 1 73 THR n 1 74 VAL n 1 75 LEU n 1 76 HIS n 1 77 GLN n 1 78 ASP n 1 79 TRP n 1 80 LEU n 1 81 ASN n 1 82 GLY n 1 83 LYS n 1 84 GLU n 1 85 TYR n 1 86 LYS n 1 87 CYS n 1 88 LYS n 1 89 VAL n 1 90 SER n 1 91 ASN n 1 92 LYS n 1 93 ALA n 1 94 LEU n 1 95 PRO n 1 96 ALA n 1 97 PRO n 1 98 ILE n 1 99 GLU n 1 100 LYS n 1 101 THR n 1 102 ILE n 1 103 SER n 1 104 LYS n 1 105 ALA n 1 106 LYS n 1 107 GLY n 1 108 GLN n 1 109 PRO n 1 110 ARG n 1 111 GLU n 1 112 PRO n 1 113 GLN n 1 114 VAL n 1 115 TYR n 1 116 THR n 1 117 LEU n 1 118 PRO n 1 119 PRO n 1 120 SER n 1 121 ARG n 1 122 GLU n 1 123 GLU n 1 124 MET n 1 125 THR n 1 126 LYS n 1 127 ASN n 1 128 GLN n 1 129 VAL n 1 130 SER n 1 131 LEU n 1 132 SER n 1 133 CYS n 1 134 ALA n 1 135 VAL n 1 136 LYS n 1 137 GLY n 1 138 PHE n 1 139 TYR n 1 140 PRO n 1 141 SER n 1 142 ASP n 1 143 ILE n 1 144 ALA n 1 145 VAL n 1 146 GLU n 1 147 TRP n 1 148 GLU n 1 149 SER n 1 150 ASN n 1 151 GLY n 1 152 GLN n 1 153 PRO n 1 154 GLU n 1 155 ASN n 1 156 ASN n 1 157 TYR n 1 158 LYS n 1 159 THR n 1 160 THR n 1 161 PRO n 1 162 PRO n 1 163 VAL n 1 164 LEU n 1 165 ASP n 1 166 SER n 1 167 ASP n 1 168 GLY n 1 169 SER n 1 170 PHE n 1 171 PHE n 1 172 LEU n 1 173 VAL n 1 174 SER n 1 175 LYS n 1 176 LEU n 1 177 THR n 1 178 VAL n 1 179 ASP n 1 180 LYS n 1 181 SER n 1 182 ARG n 1 183 TRP n 1 184 GLN n 1 185 GLN n 1 186 GLY n 1 187 ASN n 1 188 VAL n 1 189 PHE n 1 190 SER n 1 191 CYS n 1 192 SER n 1 193 VAL n 1 194 MET n 1 195 HIS n 1 196 GLU n 1 197 ALA n 1 198 LEU n 1 199 HIS n 1 200 ASN n 1 201 HIS n 1 202 TYR n 1 203 THR n 1 204 GLN n 1 205 LYS n 1 206 SER n 1 207 LEU n 1 208 SER n 1 209 LEU n 1 210 SER n 1 211 PRO n 1 212 GLY n 1 213 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene IGHG1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IGHG1_HUMAN _struct_ref.pdbx_db_accession P01857 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWL NGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTT PPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK ; _struct_ref.pdbx_align_begin 118 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NQT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 213 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01857 _struct_ref_seq.db_align_beg 118 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 330 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 235 _struct_ref_seq.pdbx_auth_seq_align_end 447 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NQT GLU A 122 ? UNP P01857 ASP 239 'SEE REMARK 999' 356 1 1 4NQT MET A 124 ? UNP P01857 LEU 241 'SEE REMARK 999' 358 2 1 4NQT SER A 132 ? UNP P01857 THR 249 'engineered mutation' 366 3 1 4NQT ALA A 134 ? UNP P01857 LEU 251 'engineered mutation' 368 4 1 4NQT VAL A 173 ? UNP P01857 TYR 290 'engineered mutation' 407 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4NQT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_percent_sol 46.65 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_details '25% PEG1500, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX-300' _diffrn_detector.pdbx_collection_date 2010-09-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.entry_id 4NQT _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 38 _reflns.d_resolution_high 2.1 _reflns.number_obs 12855 _reflns.number_all 13006 _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4NQT _refine.ls_number_reflns_obs 11950 _refine.ls_number_reflns_all 13006 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.90 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 99.26 _refine.ls_R_factor_obs 0.19824 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19407 _refine.ls_R_factor_R_free 0.25284 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.0 _refine.ls_number_reflns_R_free 905 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.921 _refine.B_iso_mean 42.057 _refine.aniso_B[1][1] -1.50 _refine.aniso_B[2][2] 1.15 _refine.aniso_B[3][3] 0.43 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.51 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1L6X' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.251 _refine.pdbx_overall_ESU_R_Free 0.209 _refine.overall_SU_ML 0.150 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 11.412 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4NQT _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1656 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 1762 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 37.90 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.008 0.019 ? 1703 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.007 0.020 ? 1594 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.085 1.956 ? 2320 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.757 3.002 ? 3698 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.133 5.000 ? 207 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 37.851 25.067 ? 75 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 15.430 15.000 ? 290 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 25.219 15.000 ? 6 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.062 0.200 ? 255 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.004 0.021 ? 1901 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 369 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.213 _refine_ls_shell.number_reflns_R_work 1727 _refine_ls_shell.R_factor_R_work 0.237 _refine_ls_shell.percent_reflns_obs 99.14 _refine_ls_shell.R_factor_R_free 0.304 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 126 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4NQT _struct.title 'anti-parallel Fc-hole(T366S/L368A/Y407V) homodimer' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NQT _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'immunoglobulin, IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 12 ? MET A 18 ? LYS A 246 MET A 252 1 ? 7 HELX_P HELX_P2 2 LEU A 75 ? ASN A 81 ? LEU A 309 ASN A 315 1 ? 7 HELX_P HELX_P3 3 LYS A 180 ? GLN A 185 ? LYS A 414 GLN A 419 1 ? 6 HELX_P HELX_P4 4 LEU A 198 ? TYR A 202 ? LEU A 432 TYR A 436 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 27 SG ? ? ? 1_555 A CYS 87 SG ? ? A CYS 261 A CYS 321 1_555 ? ? ? ? ? ? ? 2.057 ? ? disulf2 disulf ? ? A CYS 133 SG ? ? ? 1_555 A CYS 191 SG ? ? A CYS 367 A CYS 425 1_555 ? ? ? ? ? ? ? 2.047 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 139 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 373 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 140 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 374 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.47 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 5 ? PHE A 9 ? SER A 239 PHE A 243 A 2 GLU A 24 ? VAL A 32 ? GLU A 258 VAL A 266 A 3 TYR A 66 ? THR A 73 ? TYR A 300 THR A 307 A 4 LYS A 54 ? THR A 55 ? LYS A 288 THR A 289 B 1 SER A 5 ? PHE A 9 ? SER A 239 PHE A 243 B 2 GLU A 24 ? VAL A 32 ? GLU A 258 VAL A 266 B 3 TYR A 66 ? THR A 73 ? TYR A 300 THR A 307 B 4 GLU A 59 ? GLU A 60 ? GLU A 293 GLU A 294 C 1 VAL A 48 ? VAL A 50 ? VAL A 282 VAL A 284 C 2 LYS A 40 ? VAL A 45 ? LYS A 274 VAL A 279 C 3 TYR A 85 ? SER A 90 ? TYR A 319 SER A 324 C 4 ILE A 98 ? ILE A 102 ? ILE A 332 ILE A 336 D 1 GLN A 113 ? LEU A 117 ? GLN A 347 LEU A 351 D 2 GLN A 128 ? PHE A 138 ? GLN A 362 PHE A 372 D 3 PHE A 170 ? ASP A 179 ? PHE A 404 ASP A 413 D 4 TYR A 157 ? THR A 159 ? TYR A 391 THR A 393 E 1 GLN A 113 ? LEU A 117 ? GLN A 347 LEU A 351 E 2 GLN A 128 ? PHE A 138 ? GLN A 362 PHE A 372 E 3 PHE A 170 ? ASP A 179 ? PHE A 404 ASP A 413 E 4 VAL A 163 ? LEU A 164 ? VAL A 397 LEU A 398 F 1 GLN A 152 ? GLU A 154 ? GLN A 386 GLU A 388 F 2 ALA A 144 ? SER A 149 ? ALA A 378 SER A 383 F 3 PHE A 189 ? MET A 194 ? PHE A 423 MET A 428 F 4 THR A 203 ? LEU A 207 ? THR A 437 LEU A 441 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 5 ? N SER A 239 O VAL A 30 ? O VAL A 264 A 2 3 N CYS A 27 ? N CYS A 261 O SER A 70 ? O SER A 304 A 3 4 O VAL A 71 ? O VAL A 305 N LYS A 54 ? N LYS A 288 B 1 2 N SER A 5 ? N SER A 239 O VAL A 30 ? O VAL A 264 B 2 3 N CYS A 27 ? N CYS A 261 O SER A 70 ? O SER A 304 B 3 4 O ARG A 67 ? O ARG A 301 N GLU A 59 ? N GLU A 293 C 1 2 O VAL A 48 ? O VAL A 282 N VAL A 45 ? N VAL A 279 C 2 3 N ASN A 42 ? N ASN A 276 O LYS A 88 ? O LYS A 322 C 3 4 N VAL A 89 ? N VAL A 323 O ILE A 98 ? O ILE A 332 D 1 2 N TYR A 115 ? N TYR A 349 O ALA A 134 ? O ALA A 368 D 2 3 N LEU A 131 ? N LEU A 365 O LEU A 176 ? O LEU A 410 D 3 4 O LYS A 175 ? O LYS A 409 N LYS A 158 ? N LYS A 392 E 1 2 N TYR A 115 ? N TYR A 349 O ALA A 134 ? O ALA A 368 E 2 3 N LEU A 131 ? N LEU A 365 O LEU A 176 ? O LEU A 410 E 3 4 O PHE A 171 ? O PHE A 405 N VAL A 163 ? N VAL A 397 F 1 2 O GLU A 154 ? O GLU A 388 N TRP A 147 ? N TRP A 381 F 2 3 N ALA A 144 ? N ALA A 378 O MET A 194 ? O MET A 428 F 3 4 N CYS A 191 ? N CYS A 425 O LYS A 205 ? O LYS A 439 # _database_PDB_matrix.entry_id 4NQT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4NQT _atom_sites.fract_transf_matrix[1][1] 0.013251 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004017 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022483 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015167 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 235 ? ? ? A . n A 1 2 GLY 2 236 ? ? ? A . n A 1 3 GLY 3 237 237 GLY GLY A . n A 1 4 PRO 4 238 238 PRO PRO A . n A 1 5 SER 5 239 239 SER SER A . n A 1 6 VAL 6 240 240 VAL VAL A . n A 1 7 PHE 7 241 241 PHE PHE A . n A 1 8 LEU 8 242 242 LEU LEU A . n A 1 9 PHE 9 243 243 PHE PHE A . n A 1 10 PRO 10 244 244 PRO PRO A . n A 1 11 PRO 11 245 245 PRO PRO A . n A 1 12 LYS 12 246 246 LYS LYS A . n A 1 13 PRO 13 247 247 PRO PRO A . n A 1 14 LYS 14 248 248 LYS LYS A . n A 1 15 ASP 15 249 249 ASP ASP A . n A 1 16 THR 16 250 250 THR THR A . n A 1 17 LEU 17 251 251 LEU LEU A . n A 1 18 MET 18 252 252 MET MET A . n A 1 19 ILE 19 253 253 ILE ILE A . n A 1 20 SER 20 254 254 SER SER A . n A 1 21 ARG 21 255 255 ARG ARG A . n A 1 22 THR 22 256 256 THR THR A . n A 1 23 PRO 23 257 257 PRO PRO A . n A 1 24 GLU 24 258 258 GLU GLU A . n A 1 25 VAL 25 259 259 VAL VAL A . n A 1 26 THR 26 260 260 THR THR A . n A 1 27 CYS 27 261 261 CYS CYS A . n A 1 28 VAL 28 262 262 VAL VAL A . n A 1 29 VAL 29 263 263 VAL VAL A . n A 1 30 VAL 30 264 264 VAL VAL A . n A 1 31 ASP 31 265 265 ASP ASP A . n A 1 32 VAL 32 266 266 VAL VAL A . n A 1 33 SER 33 267 267 SER SER A . n A 1 34 HIS 34 268 268 HIS HIS A . n A 1 35 GLU 35 269 269 GLU GLU A . n A 1 36 ASP 36 270 270 ASP ASP A . n A 1 37 PRO 37 271 271 PRO PRO A . n A 1 38 GLU 38 272 272 GLU GLU A . n A 1 39 VAL 39 273 273 VAL VAL A . n A 1 40 LYS 40 274 274 LYS LYS A . n A 1 41 PHE 41 275 275 PHE PHE A . n A 1 42 ASN 42 276 276 ASN ASN A . n A 1 43 TRP 43 277 277 TRP TRP A . n A 1 44 TYR 44 278 278 TYR TYR A . n A 1 45 VAL 45 279 279 VAL VAL A . n A 1 46 ASP 46 280 280 ASP ASP A . n A 1 47 GLY 47 281 281 GLY GLY A . n A 1 48 VAL 48 282 282 VAL VAL A . n A 1 49 GLU 49 283 283 GLU GLU A . n A 1 50 VAL 50 284 284 VAL VAL A . n A 1 51 HIS 51 285 285 HIS HIS A . n A 1 52 ASN 52 286 286 ASN ASN A . n A 1 53 ALA 53 287 287 ALA ALA A . n A 1 54 LYS 54 288 288 LYS LYS A . n A 1 55 THR 55 289 289 THR THR A . n A 1 56 LYS 56 290 290 LYS LYS A . n A 1 57 PRO 57 291 291 PRO PRO A . n A 1 58 ARG 58 292 292 ARG ARG A . n A 1 59 GLU 59 293 293 GLU GLU A . n A 1 60 GLU 60 294 294 GLU GLU A . n A 1 61 GLN 61 295 295 GLN GLN A . n A 1 62 TYR 62 296 296 TYR TYR A . n A 1 63 ASN 63 297 297 ASN ASN A . n A 1 64 SER 64 298 298 SER SER A . n A 1 65 THR 65 299 299 THR THR A . n A 1 66 TYR 66 300 300 TYR TYR A . n A 1 67 ARG 67 301 301 ARG ARG A . n A 1 68 VAL 68 302 302 VAL VAL A . n A 1 69 VAL 69 303 303 VAL VAL A . n A 1 70 SER 70 304 304 SER SER A . n A 1 71 VAL 71 305 305 VAL VAL A . n A 1 72 LEU 72 306 306 LEU LEU A . n A 1 73 THR 73 307 307 THR THR A . n A 1 74 VAL 74 308 308 VAL VAL A . n A 1 75 LEU 75 309 309 LEU LEU A . n A 1 76 HIS 76 310 310 HIS HIS A . n A 1 77 GLN 77 311 311 GLN GLN A . n A 1 78 ASP 78 312 312 ASP ASP A . n A 1 79 TRP 79 313 313 TRP TRP A . n A 1 80 LEU 80 314 314 LEU LEU A . n A 1 81 ASN 81 315 315 ASN ASN A . n A 1 82 GLY 82 316 316 GLY GLY A . n A 1 83 LYS 83 317 317 LYS LYS A . n A 1 84 GLU 84 318 318 GLU GLU A . n A 1 85 TYR 85 319 319 TYR TYR A . n A 1 86 LYS 86 320 320 LYS LYS A . n A 1 87 CYS 87 321 321 CYS CYS A . n A 1 88 LYS 88 322 322 LYS LYS A . n A 1 89 VAL 89 323 323 VAL VAL A . n A 1 90 SER 90 324 324 SER SER A . n A 1 91 ASN 91 325 325 ASN ASN A . n A 1 92 LYS 92 326 326 LYS LYS A . n A 1 93 ALA 93 327 327 ALA ALA A . n A 1 94 LEU 94 328 328 LEU LEU A . n A 1 95 PRO 95 329 329 PRO PRO A . n A 1 96 ALA 96 330 330 ALA ALA A . n A 1 97 PRO 97 331 331 PRO PRO A . n A 1 98 ILE 98 332 332 ILE ILE A . n A 1 99 GLU 99 333 333 GLU GLU A . n A 1 100 LYS 100 334 334 LYS LYS A . n A 1 101 THR 101 335 335 THR THR A . n A 1 102 ILE 102 336 336 ILE ILE A . n A 1 103 SER 103 337 337 SER SER A . n A 1 104 LYS 104 338 338 LYS LYS A . n A 1 105 ALA 105 339 339 ALA ALA A . n A 1 106 LYS 106 340 340 LYS LYS A . n A 1 107 GLY 107 341 341 GLY GLY A . n A 1 108 GLN 108 342 342 GLN GLN A . n A 1 109 PRO 109 343 343 PRO PRO A . n A 1 110 ARG 110 344 344 ARG ARG A . n A 1 111 GLU 111 345 345 GLU GLU A . n A 1 112 PRO 112 346 346 PRO PRO A . n A 1 113 GLN 113 347 347 GLN GLN A . n A 1 114 VAL 114 348 348 VAL VAL A . n A 1 115 TYR 115 349 349 TYR TYR A . n A 1 116 THR 116 350 350 THR THR A . n A 1 117 LEU 117 351 351 LEU LEU A . n A 1 118 PRO 118 352 352 PRO PRO A . n A 1 119 PRO 119 353 353 PRO PRO A . n A 1 120 SER 120 354 354 SER SER A . n A 1 121 ARG 121 355 355 ARG ARG A . n A 1 122 GLU 122 356 356 GLU GLU A . n A 1 123 GLU 123 357 357 GLU GLU A . n A 1 124 MET 124 358 358 MET MET A . n A 1 125 THR 125 359 359 THR THR A . n A 1 126 LYS 126 360 360 LYS LYS A . n A 1 127 ASN 127 361 361 ASN ASN A . n A 1 128 GLN 128 362 362 GLN GLN A . n A 1 129 VAL 129 363 363 VAL VAL A . n A 1 130 SER 130 364 364 SER SER A . n A 1 131 LEU 131 365 365 LEU LEU A . n A 1 132 SER 132 366 366 SER SER A . n A 1 133 CYS 133 367 367 CYS CYS A . n A 1 134 ALA 134 368 368 ALA ALA A . n A 1 135 VAL 135 369 369 VAL VAL A . n A 1 136 LYS 136 370 370 LYS LYS A . n A 1 137 GLY 137 371 371 GLY GLY A . n A 1 138 PHE 138 372 372 PHE PHE A . n A 1 139 TYR 139 373 373 TYR TYR A . n A 1 140 PRO 140 374 374 PRO PRO A . n A 1 141 SER 141 375 375 SER SER A . n A 1 142 ASP 142 376 376 ASP ASP A . n A 1 143 ILE 143 377 377 ILE ILE A . n A 1 144 ALA 144 378 378 ALA ALA A . n A 1 145 VAL 145 379 379 VAL VAL A . n A 1 146 GLU 146 380 380 GLU GLU A . n A 1 147 TRP 147 381 381 TRP TRP A . n A 1 148 GLU 148 382 382 GLU GLU A . n A 1 149 SER 149 383 383 SER SER A . n A 1 150 ASN 150 384 384 ASN ASN A . n A 1 151 GLY 151 385 385 GLY GLY A . n A 1 152 GLN 152 386 386 GLN GLN A . n A 1 153 PRO 153 387 387 PRO PRO A . n A 1 154 GLU 154 388 388 GLU GLU A . n A 1 155 ASN 155 389 389 ASN ASN A . n A 1 156 ASN 156 390 390 ASN ASN A . n A 1 157 TYR 157 391 391 TYR TYR A . n A 1 158 LYS 158 392 392 LYS LYS A . n A 1 159 THR 159 393 393 THR THR A . n A 1 160 THR 160 394 394 THR THR A . n A 1 161 PRO 161 395 395 PRO PRO A . n A 1 162 PRO 162 396 396 PRO PRO A . n A 1 163 VAL 163 397 397 VAL VAL A . n A 1 164 LEU 164 398 398 LEU LEU A . n A 1 165 ASP 165 399 399 ASP ASP A . n A 1 166 SER 166 400 400 SER SER A . n A 1 167 ASP 167 401 401 ASP ASP A . n A 1 168 GLY 168 402 402 GLY GLY A . n A 1 169 SER 169 403 403 SER SER A . n A 1 170 PHE 170 404 404 PHE PHE A . n A 1 171 PHE 171 405 405 PHE PHE A . n A 1 172 LEU 172 406 406 LEU LEU A . n A 1 173 VAL 173 407 407 VAL VAL A . n A 1 174 SER 174 408 408 SER SER A . n A 1 175 LYS 175 409 409 LYS LYS A . n A 1 176 LEU 176 410 410 LEU LEU A . n A 1 177 THR 177 411 411 THR THR A . n A 1 178 VAL 178 412 412 VAL VAL A . n A 1 179 ASP 179 413 413 ASP ASP A . n A 1 180 LYS 180 414 414 LYS LYS A . n A 1 181 SER 181 415 415 SER SER A . n A 1 182 ARG 182 416 416 ARG ARG A . n A 1 183 TRP 183 417 417 TRP TRP A . n A 1 184 GLN 184 418 418 GLN GLN A . n A 1 185 GLN 185 419 419 GLN GLN A . n A 1 186 GLY 186 420 420 GLY GLY A . n A 1 187 ASN 187 421 421 ASN ASN A . n A 1 188 VAL 188 422 422 VAL VAL A . n A 1 189 PHE 189 423 423 PHE PHE A . n A 1 190 SER 190 424 424 SER SER A . n A 1 191 CYS 191 425 425 CYS CYS A . n A 1 192 SER 192 426 426 SER SER A . n A 1 193 VAL 193 427 427 VAL VAL A . n A 1 194 MET 194 428 428 MET MET A . n A 1 195 HIS 195 429 429 HIS HIS A . n A 1 196 GLU 196 430 430 GLU GLU A . n A 1 197 ALA 197 431 431 ALA ALA A . n A 1 198 LEU 198 432 432 LEU LEU A . n A 1 199 HIS 199 433 433 HIS HIS A . n A 1 200 ASN 200 434 434 ASN ASN A . n A 1 201 HIS 201 435 435 HIS HIS A . n A 1 202 TYR 202 436 436 TYR TYR A . n A 1 203 THR 203 437 437 THR THR A . n A 1 204 GLN 204 438 438 GLN GLN A . n A 1 205 LYS 205 439 439 LYS LYS A . n A 1 206 SER 206 440 440 SER SER A . n A 1 207 LEU 207 441 441 LEU LEU A . n A 1 208 SER 208 442 442 SER SER A . n A 1 209 LEU 209 443 443 LEU LEU A . n A 1 210 SER 210 444 444 SER SER A . n A 1 211 PRO 211 445 ? ? ? A . n A 1 212 GLY 212 446 ? ? ? A . n A 1 213 LYS 213 447 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 501 1 HOH HOH A . B 2 HOH 2 502 2 HOH HOH A . B 2 HOH 3 503 3 HOH HOH A . B 2 HOH 4 504 4 HOH HOH A . B 2 HOH 5 505 5 HOH HOH A . B 2 HOH 6 506 6 HOH HOH A . B 2 HOH 7 507 7 HOH HOH A . B 2 HOH 8 508 8 HOH HOH A . B 2 HOH 9 509 9 HOH HOH A . B 2 HOH 10 510 10 HOH HOH A . B 2 HOH 11 511 11 HOH HOH A . B 2 HOH 12 512 12 HOH HOH A . B 2 HOH 13 513 13 HOH HOH A . B 2 HOH 14 514 14 HOH HOH A . B 2 HOH 15 515 15 HOH HOH A . B 2 HOH 16 516 16 HOH HOH A . B 2 HOH 17 517 17 HOH HOH A . B 2 HOH 18 518 18 HOH HOH A . B 2 HOH 19 519 19 HOH HOH A . B 2 HOH 20 520 20 HOH HOH A . B 2 HOH 21 521 21 HOH HOH A . B 2 HOH 22 522 22 HOH HOH A . B 2 HOH 23 523 23 HOH HOH A . B 2 HOH 24 524 24 HOH HOH A . B 2 HOH 25 525 25 HOH HOH A . B 2 HOH 26 526 26 HOH HOH A . B 2 HOH 27 527 27 HOH HOH A . B 2 HOH 28 528 28 HOH HOH A . B 2 HOH 29 529 29 HOH HOH A . B 2 HOH 30 530 30 HOH HOH A . B 2 HOH 31 531 31 HOH HOH A . B 2 HOH 32 532 32 HOH HOH A . B 2 HOH 33 533 33 HOH HOH A . B 2 HOH 34 534 34 HOH HOH A . B 2 HOH 35 535 35 HOH HOH A . B 2 HOH 36 536 36 HOH HOH A . B 2 HOH 37 537 37 HOH HOH A . B 2 HOH 38 538 38 HOH HOH A . B 2 HOH 39 539 39 HOH HOH A . B 2 HOH 40 540 40 HOH HOH A . B 2 HOH 41 541 41 HOH HOH A . B 2 HOH 42 542 42 HOH HOH A . B 2 HOH 43 543 43 HOH HOH A . B 2 HOH 44 544 44 HOH HOH A . B 2 HOH 45 545 45 HOH HOH A . B 2 HOH 46 546 46 HOH HOH A . B 2 HOH 47 547 47 HOH HOH A . B 2 HOH 48 548 48 HOH HOH A . B 2 HOH 49 549 49 HOH HOH A . B 2 HOH 50 550 50 HOH HOH A . B 2 HOH 51 551 52 HOH HOH A . B 2 HOH 52 552 53 HOH HOH A . B 2 HOH 53 553 54 HOH HOH A . B 2 HOH 54 554 55 HOH HOH A . B 2 HOH 55 555 56 HOH HOH A . B 2 HOH 56 556 57 HOH HOH A . B 2 HOH 57 557 59 HOH HOH A . B 2 HOH 58 558 60 HOH HOH A . B 2 HOH 59 559 61 HOH HOH A . B 2 HOH 60 560 62 HOH HOH A . B 2 HOH 61 561 63 HOH HOH A . B 2 HOH 62 562 64 HOH HOH A . B 2 HOH 63 563 65 HOH HOH A . B 2 HOH 64 564 66 HOH HOH A . B 2 HOH 65 565 67 HOH HOH A . B 2 HOH 66 566 69 HOH HOH A . B 2 HOH 67 567 70 HOH HOH A . B 2 HOH 68 568 71 HOH HOH A . B 2 HOH 69 569 72 HOH HOH A . B 2 HOH 70 570 73 HOH HOH A . B 2 HOH 71 571 74 HOH HOH A . B 2 HOH 72 572 75 HOH HOH A . B 2 HOH 73 573 76 HOH HOH A . B 2 HOH 74 574 77 HOH HOH A . B 2 HOH 75 575 78 HOH HOH A . B 2 HOH 76 576 79 HOH HOH A . B 2 HOH 77 577 80 HOH HOH A . B 2 HOH 78 578 81 HOH HOH A . B 2 HOH 79 579 82 HOH HOH A . B 2 HOH 80 580 83 HOH HOH A . B 2 HOH 81 581 84 HOH HOH A . B 2 HOH 82 582 86 HOH HOH A . B 2 HOH 83 583 87 HOH HOH A . B 2 HOH 84 584 88 HOH HOH A . B 2 HOH 85 585 89 HOH HOH A . B 2 HOH 86 586 90 HOH HOH A . B 2 HOH 87 587 91 HOH HOH A . B 2 HOH 88 588 92 HOH HOH A . B 2 HOH 89 589 93 HOH HOH A . B 2 HOH 90 590 94 HOH HOH A . B 2 HOH 91 591 95 HOH HOH A . B 2 HOH 92 592 97 HOH HOH A . B 2 HOH 93 593 98 HOH HOH A . B 2 HOH 94 594 99 HOH HOH A . B 2 HOH 95 595 100 HOH HOH A . B 2 HOH 96 596 101 HOH HOH A . B 2 HOH 97 597 102 HOH HOH A . B 2 HOH 98 598 103 HOH HOH A . B 2 HOH 99 599 104 HOH HOH A . B 2 HOH 100 600 105 HOH HOH A . B 2 HOH 101 601 106 HOH HOH A . B 2 HOH 102 602 108 HOH HOH A . B 2 HOH 103 603 109 HOH HOH A . B 2 HOH 104 604 110 HOH HOH A . B 2 HOH 105 605 112 HOH HOH A . B 2 HOH 106 606 114 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2570 ? 1 MORE -10 ? 1 'SSA (A^2)' 21470 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 559 ? B HOH . 2 1 A HOH 594 ? B HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-03-12 2 'Structure model' 1 1 2014-04-23 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 1.8852 -0.6490 -20.1234 0.0983 0.0686 0.0158 -0.0318 0.0364 -0.0071 1.9560 0.6917 0.9143 0.2199 0.3771 0.0431 -0.0666 0.2374 -0.0529 -0.0875 0.0789 -0.0231 0.0064 0.0363 -0.0123 'X-RAY DIFFRACTION' 2 ? refined 7.8398 -11.3839 8.4953 0.0808 0.0047 0.0985 -0.0108 0.0075 0.0053 1.1540 2.0597 1.3713 0.2102 0.5333 -0.3182 0.1234 -0.0503 -0.1641 0.1169 -0.0313 0.0677 0.0592 -0.0648 -0.0920 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 237 ? ? A 340 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 341 ? ? A 444 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.7.0029 ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 4NQT _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'D356E and L358M (UNP D239E and L241M) ARE NATURAL VARIANTS.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 298 ? ? 88.49 -14.00 2 1 MET A 358 ? ? -71.34 49.55 3 1 THR A 359 ? ? -158.08 44.36 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 235 ? A LEU 1 2 1 Y 1 A GLY 236 ? A GLY 2 3 1 Y 1 A PRO 445 ? A PRO 211 4 1 Y 1 A GLY 446 ? A GLY 212 5 1 Y 1 A LYS 447 ? A LYS 213 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1L6X _pdbx_initial_refinement_model.details 'PDB ENTRY 1L6X' #