HEADER TRANSCRIPTION 26-NOV-13 4NRB TITLE CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN BAZ2B IN COMPLEX WITH TITLE 2 COMPOUND-1 N01197 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BROMODOMAIN (RESIDUES 2054-2168); COMPND 5 SYNONYM: HWALP4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAZ2B, KIAA1476; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS SGC, STRUCTURAL GENOMICS CONSORTIUM, TRANSCRIPTION, BROMODOMAIN, KEYWDS 2 ACETYLATED LYSINE BINDING PROTEIN, KIAA1476, WALP4 EXPDTA X-RAY DIFFRACTION AUTHOR J.R.C.MUNIZ,I.FELLETAR,A.CHAIKUAD,P.FILIPPAKOPOULOS,F.M.FERGUSON, AUTHOR 2 O.FEDOROV,F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,A.CIULLI, AUTHOR 3 S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 20-SEP-23 4NRB 1 REMARK SEQADV REVDAT 2 02-JUL-14 4NRB 1 REVDAT 1 25-DEC-13 4NRB 0 JRNL AUTH F.M.FERGUSON,O.FEDOROV,A.CHAIKUAD,M.PHILPOTT,J.R.MUNIZ, JRNL AUTH 2 I.FELLETAR,F.VON DELFT,T.HEIGHTMAN,S.KNAPP,C.ABELL,A.CIULLI JRNL TITL TARGETING LOW-DRUGGABILITY BROMODOMAINS: FRAGMENT BASED JRNL TITL 2 SCREENING AND INHIBITOR DESIGN AGAINST THE BAZ2B JRNL TITL 3 BROMODOMAIN. JRNL REF J.MED.CHEM. V. 56 10183 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 24304323 JRNL DOI 10.1021/JM401582C REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 14004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 696 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 7 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.25 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2839 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2265 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2695 REMARK 3 BIN R VALUE (WORKING SET) : 0.2242 REMARK 3 BIN FREE R VALUE : 0.2683 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.07 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 144 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 920 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 202 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.02260 REMARK 3 B22 (A**2) : 2.94260 REMARK 3 B33 (A**2) : 1.07990 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.237 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 976 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1314 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 456 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 28 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 141 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 976 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 124 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1329 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.92 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.08 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.64 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|1856 - A|1863 } REMARK 3 ORIGIN FOR THE GROUP (A): -7.9796 32.9152 -11.1086 REMARK 3 T TENSOR REMARK 3 T11: 0.0475 T22: 0.0936 REMARK 3 T33: -0.0137 T12: -0.0513 REMARK 3 T13: 0.0051 T23: -0.0890 REMARK 3 L TENSOR REMARK 3 L11: 0.1734 L22: 1.8560 REMARK 3 L33: 0.6777 L12: 0.7584 REMARK 3 L13: 0.2682 L23: -2.9026 REMARK 3 S TENSOR REMARK 3 S11: -0.0130 S12: -0.1692 S13: 0.2344 REMARK 3 S21: -0.1629 S22: 0.0489 S23: -0.1756 REMARK 3 S31: 0.1017 S32: 0.1653 S33: -0.0358 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|1864 - A|1894 } REMARK 3 ORIGIN FOR THE GROUP (A): 21.8077 25.2165 -2.2762 REMARK 3 T TENSOR REMARK 3 T11: 0.0073 T22: -0.1049 REMARK 3 T33: -0.0841 T12: 0.0001 REMARK 3 T13: 0.0281 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 2.1282 L22: 2.3682 REMARK 3 L33: 1.9987 L12: -0.6157 REMARK 3 L13: 0.5189 L23: -0.2860 REMARK 3 S TENSOR REMARK 3 S11: -0.0405 S12: -0.0728 S13: 0.2814 REMARK 3 S21: 0.1193 S22: 0.0071 S23: -0.2111 REMARK 3 S31: -0.0781 S32: -0.0479 S33: 0.0334 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|1895 - A|1903 } REMARK 3 ORIGIN FOR THE GROUP (A): 26.3357 2.2539 -6.4663 REMARK 3 T TENSOR REMARK 3 T11: 0.1121 T22: -0.0661 REMARK 3 T33: 0.0235 T12: 0.0387 REMARK 3 T13: 0.0147 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.5880 L22: 1.8550 REMARK 3 L33: 0.6813 L12: 2.0987 REMARK 3 L13: 2.9029 L23: 0.5530 REMARK 3 S TENSOR REMARK 3 S11: 0.0514 S12: -0.0051 S13: -0.0746 REMARK 3 S21: -0.1629 S22: -0.0834 S23: -0.4126 REMARK 3 S31: 0.2263 S32: -0.0794 S33: 0.0320 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|1904 - A|1908 } REMARK 3 ORIGIN FOR THE GROUP (A): 17.3890 5.8114 -6.3807 REMARK 3 T TENSOR REMARK 3 T11: 0.1417 T22: -0.0821 REMARK 3 T33: -0.0012 T12: -0.0033 REMARK 3 T13: -0.0318 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.1364 REMARK 3 L33: 0.4679 L12: -0.2506 REMARK 3 L13: -1.0735 L23: -0.0146 REMARK 3 S TENSOR REMARK 3 S11: 0.0195 S12: 0.0547 S13: -0.0749 REMARK 3 S21: -0.0282 S22: -0.0024 S23: 0.0169 REMARK 3 S31: 0.0168 S32: -0.0200 S33: -0.0171 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|1909 - A|1961 } REMARK 3 ORIGIN FOR THE GROUP (A): 18.8240 17.1598 -0.8789 REMARK 3 T TENSOR REMARK 3 T11: 0.0411 T22: -0.0674 REMARK 3 T33: -0.0916 T12: 0.0057 REMARK 3 T13: 0.0166 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 1.2299 L22: 1.9618 REMARK 3 L33: 2.5304 L12: -0.7380 REMARK 3 L13: 0.1412 L23: -0.9279 REMARK 3 S TENSOR REMARK 3 S11: 0.0362 S12: -0.0362 S13: 0.0322 REMARK 3 S21: 0.0159 S22: -0.0011 S23: 0.0004 REMARK 3 S31: 0.0117 S32: -0.0585 S33: -0.0351 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { A|1962 - A|1969 } REMARK 3 ORIGIN FOR THE GROUP (A): 12.6762 29.0275 3.7882 REMARK 3 T TENSOR REMARK 3 T11: 0.1845 T22: -0.0270 REMARK 3 T33: -0.0644 T12: 0.0962 REMARK 3 T13: 0.0306 T23: -0.0387 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.8553 REMARK 3 L33: 0.0000 L12: -1.2959 REMARK 3 L13: 0.6351 L23: -2.6561 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: -0.0259 S13: 0.0555 REMARK 3 S21: 0.1814 S22: 0.0368 S23: 0.1111 REMARK 3 S31: -0.1667 S32: -0.1744 S33: -0.0190 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NRB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083558. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : FLAT GRAPHITE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14004 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 29.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.15400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.78700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3G0L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 19% PEG 1000, 15% GLYCEROL, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.84000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 28.84000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.72000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.27500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.72000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.27500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.84000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.72000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.27500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 28.84000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.72000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.27500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2270 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2301 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 1970 REMARK 465 VAL A 1971 REMARK 465 SER A 1972 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1863 CG CD CE NZ REMARK 470 LYS A1868 CE NZ REMARK 470 GLU A1927 CD OE1 OE2 REMARK 470 LYS A1959 CE NZ REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2LX A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NR9 RELATED DB: PDB REMARK 900 RELATED ID: 4NRA RELATED DB: PDB REMARK 900 RELATED ID: 4NRC RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CRYSTALLIZED SEQUENCE CORRESPONDS TO ISOFORM 4 DBREF 4NRB A 1858 1972 UNP Q9UIF8 BAZ2B_HUMAN 2054 2168 SEQADV 4NRB SER A 1856 UNP Q9UIF8 EXPRESSION TAG SEQADV 4NRB MET A 1857 UNP Q9UIF8 EXPRESSION TAG SEQRES 1 A 117 SER MET SER VAL LYS LYS PRO LYS ARG ASP ASP SER LYS SEQRES 2 A 117 ASP LEU ALA LEU CYS SER MET ILE LEU THR GLU MET GLU SEQRES 3 A 117 THR HIS GLU ASP ALA TRP PRO PHE LEU LEU PRO VAL ASN SEQRES 4 A 117 LEU LYS LEU VAL PRO GLY TYR LYS LYS VAL ILE LYS LYS SEQRES 5 A 117 PRO MET ASP PHE SER THR ILE ARG GLU LYS LEU SER SER SEQRES 6 A 117 GLY GLN TYR PRO ASN LEU GLU THR PHE ALA LEU ASP VAL SEQRES 7 A 117 ARG LEU VAL PHE ASP ASN CYS GLU THR PHE ASN GLU ASP SEQRES 8 A 117 ASP SER ASP ILE GLY ARG ALA GLY HIS ASN MET ARG LYS SEQRES 9 A 117 TYR PHE GLU LYS LYS TRP THR ASP THR PHE LYS VAL SER HET 2LX A2001 17 HET EDO A2002 4 HETNAM 2LX N-METHYL-2-(TETRAHYDRO-2H-PYRAN-4-YLOXY)BENZAMIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 2LX C13 H17 N O3 FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *202(H2 O) HELIX 1 1 LYS A 1868 HIS A 1883 1 16 HELIX 2 2 GLU A 1884 LEU A 1890 5 7 HELIX 3 3 GLY A 1900 ILE A 1905 1 6 HELIX 4 4 ASP A 1910 SER A 1920 1 11 HELIX 5 5 ASN A 1925 ASN A 1944 1 20 HELIX 6 6 SER A 1948 PHE A 1969 1 22 SITE 1 AC1 8 PRO A1888 VAL A1893 VAL A1898 PHE A1943 SITE 2 AC1 8 ASN A1944 ILE A1950 HOH A2268 HOH A2277 SITE 1 AC2 3 LYS A1917 HOH A2169 HOH A2288 CRYST1 81.440 96.550 57.680 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012279 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010357 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017337 0.00000