HEADER TRANSCRIPTION 26-NOV-13 4NRC TITLE CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN BAZ2B IN COMPLEX WITH TITLE 2 COMPOUND-3 N01186 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BROMODOMAIN (UNP RESIDUES 2054-2168); COMPND 5 SYNONYM: HWALP4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAZ2B, KIAA1476; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS SGC, STRUCTURAL GENOMICS CONSORTIUM, TRANSCRIPTION, BROMODOMAIN, KEYWDS 2 ACETYLATED LYSINE BINDING PROTEIN, KIAA1476, WALP4 EXPDTA X-RAY DIFFRACTION AUTHOR J.R.C.MUNIZ,I.FELLETAR,A.CHAIKUAD,P.FILIPPAKOPOULOS,F.M.FERGUSON, AUTHOR 2 O.FEDOROV,F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,A.CIULLI, AUTHOR 3 S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 20-SEP-23 4NRC 1 REMARK SEQADV REVDAT 2 02-JUL-14 4NRC 1 REVDAT 1 25-DEC-13 4NRC 0 JRNL AUTH F.M.FERGUSON,O.FEDOROV,A.CHAIKUAD,M.PHILPOTT,J.R.MUNIZ, JRNL AUTH 2 I.FELLETAR,F.VON DELFT,T.HEIGHTMAN,S.KNAPP,C.ABELL,A.CIULLI JRNL TITL TARGETING LOW-DRUGGABILITY BROMODOMAINS: FRAGMENT BASED JRNL TITL 2 SCREENING AND INHIBITOR DESIGN AGAINST THE BAZ2B JRNL TITL 3 BROMODOMAIN. JRNL REF J.MED.CHEM. V. 56 10183 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 24304323 JRNL DOI 10.1021/JM401582C REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 19430 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 995 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.96 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2786 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2264 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2637 REMARK 3 BIN R VALUE (WORKING SET) : 0.2254 REMARK 3 BIN FREE R VALUE : 0.2454 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.35 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 149 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 922 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 231 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.34830 REMARK 3 B22 (A**2) : 2.40020 REMARK 3 B33 (A**2) : 2.94820 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.188 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1008 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1356 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 477 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 28 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 147 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1008 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 126 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1421 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.87 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.15 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.57 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|1856 - A|1863 } REMARK 3 ORIGIN FOR THE GROUP (A): 7.9174 -32.8768 -11.0093 REMARK 3 T TENSOR REMARK 3 T11: 0.0178 T22: 0.0614 REMARK 3 T33: -0.0359 T12: -0.0404 REMARK 3 T13: -0.0323 T23: 0.0356 REMARK 3 L TENSOR REMARK 3 L11: 0.6246 L22: 4.1240 REMARK 3 L33: 0.0000 L12: -0.7225 REMARK 3 L13: -0.0129 L23: 2.5423 REMARK 3 S TENSOR REMARK 3 S11: 0.0041 S12: -0.1353 S13: -0.1052 REMARK 3 S21: -0.1786 S22: 0.0300 S23: 0.0307 REMARK 3 S31: -0.0336 S32: -0.1824 S33: -0.0341 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|1864 - A|1894 } REMARK 3 ORIGIN FOR THE GROUP (A): -21.7730 -25.4348 -2.4649 REMARK 3 T TENSOR REMARK 3 T11: -0.0049 T22: -0.0655 REMARK 3 T33: -0.0700 T12: -0.0070 REMARK 3 T13: -0.0186 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.6686 L22: 1.5841 REMARK 3 L33: 1.5763 L12: -0.1386 REMARK 3 L13: -0.2106 L23: 0.3408 REMARK 3 S TENSOR REMARK 3 S11: 0.0019 S12: -0.0229 S13: -0.1606 REMARK 3 S21: 0.0646 S22: -0.0594 S23: 0.1199 REMARK 3 S31: 0.1035 S32: -0.0542 S33: 0.0574 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|1895 - A|1903 } REMARK 3 ORIGIN FOR THE GROUP (A): -26.0999 -2.0947 -6.2462 REMARK 3 T TENSOR REMARK 3 T11: 0.1035 T22: -0.0650 REMARK 3 T33: 0.0193 T12: 0.0293 REMARK 3 T13: -0.0089 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 1.2754 REMARK 3 L33: 0.3046 L12: 2.7465 REMARK 3 L13: -0.6924 L23: 0.1742 REMARK 3 S TENSOR REMARK 3 S11: 0.0232 S12: -0.0102 S13: 0.0525 REMARK 3 S21: -0.1472 S22: -0.0386 S23: 0.2472 REMARK 3 S31: -0.1322 S32: -0.0416 S33: 0.0154 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|1904 - A|1908 } REMARK 3 ORIGIN FOR THE GROUP (A): -17.3512 -5.8110 -6.3202 REMARK 3 T TENSOR REMARK 3 T11: 0.0935 T22: -0.0660 REMARK 3 T33: 0.0004 T12: -0.0215 REMARK 3 T13: 0.0400 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.0046 L22: 0.3694 REMARK 3 L33: 0.7196 L12: -0.7353 REMARK 3 L13: 1.8506 L23: -0.8613 REMARK 3 S TENSOR REMARK 3 S11: 0.0090 S12: -0.0146 S13: -0.0039 REMARK 3 S21: 0.0139 S22: 0.0246 S23: -0.0127 REMARK 3 S31: -0.0598 S32: 0.0109 S33: -0.0336 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { A|1909 - A|1961 } REMARK 3 ORIGIN FOR THE GROUP (A): -18.7626 -17.4962 -1.1184 REMARK 3 T TENSOR REMARK 3 T11: 0.0017 T22: -0.0572 REMARK 3 T33: -0.0701 T12: 0.0021 REMARK 3 T13: -0.0115 T23: 0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.4847 L22: 1.3609 REMARK 3 L33: 2.3826 L12: -0.2805 REMARK 3 L13: -0.4529 L23: 0.5492 REMARK 3 S TENSOR REMARK 3 S11: 0.0086 S12: -0.0304 S13: -0.0125 REMARK 3 S21: 0.0399 S22: 0.0031 S23: -0.0022 REMARK 3 S31: -0.0311 S32: 0.0640 S33: -0.0117 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { A|1962 - A|1970 } REMARK 3 ORIGIN FOR THE GROUP (A): -12.3429 -29.2846 3.5044 REMARK 3 T TENSOR REMARK 3 T11: 0.2379 T22: 0.0327 REMARK 3 T33: -0.1035 T12: 0.1436 REMARK 3 T13: -0.0499 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.5508 REMARK 3 L33: 0.9264 L12: 0.3627 REMARK 3 L13: 0.4758 L23: 1.2539 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: -0.0306 S13: 0.0400 REMARK 3 S21: 0.1222 S22: 0.0304 S23: -0.0528 REMARK 3 S31: 0.0986 S32: 0.1881 S33: -0.0281 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NRC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083559. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : FLAT GRAPHITE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19430 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 29.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.80200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3G0L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 19% PEG 1000, 12% GLYCEROL, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.87000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 28.87000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.63500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.29500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.63500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.29500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.87000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.63500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.29500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 28.87000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.63500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.29500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2159 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1971 REMARK 465 SER A 1972 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A1863 CG CD CE NZ REMARK 470 LYS A1868 CE NZ REMARK 470 LYS A1896 CE NZ REMARK 470 GLU A1927 CG CD OE1 OE2 REMARK 470 LYS A1959 CE NZ REMARK 470 LYS A1970 CG CD CE NZ REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 15P A 2004 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2LY A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 15P A 2004 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NR9 RELATED DB: PDB REMARK 900 RELATED ID: 4NRA RELATED DB: PDB REMARK 900 RELATED ID: 4NRB RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CRYSTALLIZED SEQUENCE CORRESPONDS TO ISOFORM 4 DBREF 4NRC A 1858 1972 UNP Q9UIF8 BAZ2B_HUMAN 2054 2168 SEQADV 4NRC SER A 1856 UNP Q9UIF8 EXPRESSION TAG SEQADV 4NRC MET A 1857 UNP Q9UIF8 EXPRESSION TAG SEQRES 1 A 117 SER MET SER VAL LYS LYS PRO LYS ARG ASP ASP SER LYS SEQRES 2 A 117 ASP LEU ALA LEU CYS SER MET ILE LEU THR GLU MET GLU SEQRES 3 A 117 THR HIS GLU ASP ALA TRP PRO PHE LEU LEU PRO VAL ASN SEQRES 4 A 117 LEU LYS LEU VAL PRO GLY TYR LYS LYS VAL ILE LYS LYS SEQRES 5 A 117 PRO MET ASP PHE SER THR ILE ARG GLU LYS LEU SER SER SEQRES 6 A 117 GLY GLN TYR PRO ASN LEU GLU THR PHE ALA LEU ASP VAL SEQRES 7 A 117 ARG LEU VAL PHE ASP ASN CYS GLU THR PHE ASN GLU ASP SEQRES 8 A 117 ASP SER ASP ILE GLY ARG ALA GLY HIS ASN MET ARG LYS SEQRES 9 A 117 TYR PHE GLU LYS LYS TRP THR ASP THR PHE LYS VAL SER HET 2LY A2001 13 HET EDO A2002 4 HET EDO A2003 4 HET 15P A2004 13 HETNAM 2LY N-METHYL-2,3-DIHYDROTHIENO[3,4-B][1,4]DIOXINE-5- HETNAM 2 2LY CARBOXAMIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM 15P POLYETHYLENE GLYCOL (N=34) HETSYN EDO ETHYLENE GLYCOL HETSYN 15P PEG 1500 FORMUL 2 2LY C8 H9 N O3 S FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 15P C69 H140 O35 FORMUL 6 HOH *231(H2 O) HELIX 1 1 LYS A 1868 HIS A 1883 1 16 HELIX 2 2 ALA A 1886 LEU A 1890 5 5 HELIX 3 3 GLY A 1900 ILE A 1905 1 6 HELIX 4 4 ASP A 1910 SER A 1920 1 11 HELIX 5 5 ASN A 1925 ASN A 1944 1 20 HELIX 6 6 SER A 1948 LYS A 1970 1 23 SITE 1 AC1 5 PRO A1888 PHE A1889 ASN A1944 ILE A1950 SITE 2 AC1 5 HOH A2326 SITE 1 AC2 6 LEU A1872 MET A1875 GLU A1879 LYS A1964 SITE 2 AC2 6 THR A1968 HOH A2173 SITE 1 AC3 4 ARG A1864 HOH A2175 HOH A2176 HOH A2224 SITE 1 AC4 4 LEU A1895 LYS A1896 LYS A1902 GLU A1945 CRYST1 81.270 96.590 57.740 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012305 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010353 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017319 0.00000