HEADER PROTEIN BINDING 28-NOV-13 4NSO TITLE CRYSTAL STRUCTURE OF THE EFFECTOR-IMMUNITY PROTEIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: EFFECTOR PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 731-981; COMPND 5 SYNONYM: VGRG PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: IMMUNITY PROTEIN; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: UNP RESIDUES 26-122; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O1 BIOVAR EL TOR; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: N16961; SOURCE 5 GENE: VCPCS023_003519, VC_A0123; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O1 BIOVAR EL TOR; SOURCE 10 ORGANISM_TAXID: 243277; SOURCE 11 STRAIN: N16961; SOURCE 12 GENE: VC_A0124; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HELIX, PEPTIDOGLYCAN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.DONG REVDAT 3 11-JUN-14 4NSO 1 JRNL REVDAT 2 21-MAY-14 4NSO 1 JRNL REVDAT 1 16-APR-14 4NSO 0 JRNL AUTH J.ZHANG,H.ZHANG,Z.GAO,H.HU,C.DONG,Y.H.DONG JRNL TITL STRUCTURAL BASIS FOR RECOGNITION OF THE TYPE VI SPIKE JRNL TITL 2 PROTEIN VGRG3 BY A COGNATE IMMUNITY PROTEIN. JRNL REF FEBS LETT. V. 588 1891 2014 JRNL REFN ISSN 0014-5793 JRNL PMID 24751834 JRNL DOI 10.1016/J.FEBSLET.2014.04.016 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 18466 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1847 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.1701 - 5.6377 0.99 1356 149 0.2049 0.2417 REMARK 3 2 5.6377 - 4.4770 0.99 1330 148 0.1772 0.2055 REMARK 3 3 4.4770 - 3.9117 0.99 1311 147 0.1710 0.2090 REMARK 3 4 3.9117 - 3.5544 0.98 1297 145 0.2161 0.2683 REMARK 3 5 3.5544 - 3.2998 0.97 1291 144 0.2308 0.2419 REMARK 3 6 3.2998 - 3.1053 0.99 1289 145 0.2266 0.2754 REMARK 3 7 3.1053 - 2.9498 0.98 1292 144 0.2210 0.2919 REMARK 3 8 2.9498 - 2.8215 0.98 1301 146 0.2388 0.2889 REMARK 3 9 2.8215 - 2.7129 0.97 1270 142 0.2457 0.3072 REMARK 3 10 2.7129 - 2.6193 0.96 1253 140 0.2505 0.3265 REMARK 3 11 2.6193 - 2.5374 0.96 1261 143 0.2680 0.3306 REMARK 3 12 2.5374 - 2.4649 0.94 1241 132 0.2837 0.3633 REMARK 3 13 2.4649 - 2.4000 0.87 1127 122 0.3104 0.3576 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 34.44 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.49640 REMARK 3 B22 (A**2) : 10.02300 REMARK 3 B33 (A**2) : -0.52660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 7.31880 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2390 REMARK 3 ANGLE : 1.048 3218 REMARK 3 CHIRALITY : 0.076 343 REMARK 3 PLANARITY : 0.006 415 REMARK 3 DIHEDRAL : 14.828 890 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: all REMARK 3 ORIGIN FOR THE GROUP (A): 42.9516 47.7970 36.6877 REMARK 3 T TENSOR REMARK 3 T11: 0.3119 T22: 0.3100 REMARK 3 T33: 0.1917 T12: -0.0354 REMARK 3 T13: -0.0265 T23: 0.0454 REMARK 3 L TENSOR REMARK 3 L11: 4.0665 L22: 0.8748 REMARK 3 L33: 1.8228 L12: -0.1037 REMARK 3 L13: -1.4440 L23: 0.0681 REMARK 3 S TENSOR REMARK 3 S11: -0.1215 S12: 0.2736 S13: -0.1459 REMARK 3 S21: -0.0588 S22: 0.1283 S23: 0.1587 REMARK 3 S31: 0.1983 S32: -0.3371 S33: -0.0025 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NSO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-DEC-13. REMARK 100 THE RCSB ID CODE IS RCSB083606. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BSRF REMARK 200 BEAMLINE : 3W1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19076 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.54800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1MM HEPES PH7.6, 12%(W/V)PEG3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.81550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.33000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.81550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.33000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND PART OF THE BIOLOGICAL ASSEMBLY IS GENERATED BY REMARK 300 THE TWO FOLD AXIS: -X+1,Y,-Z+1 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 124.07288 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 46.89586 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 717 REMARK 465 ALA A 718 REMARK 465 SER A 719 REMARK 465 MSE A 720 REMARK 465 THR A 721 REMARK 465 GLY A 722 REMARK 465 GLY A 723 REMARK 465 GLN A 724 REMARK 465 GLN A 725 REMARK 465 MSE A 726 REMARK 465 GLY A 727 REMARK 465 ARG A 728 REMARK 465 GLY A 729 REMARK 465 SER A 730 REMARK 465 SER A 731 REMARK 465 ASP A 732 REMARK 465 GLU A 733 REMARK 465 VAL A 734 REMARK 465 LYS A 735 REMARK 465 LEU A 736 REMARK 465 LEU A 737 REMARK 465 GLN A 738 REMARK 465 GLU A 739 REMARK 465 ALA A 740 REMARK 465 LEU A 741 REMARK 465 ILE A 742 REMARK 465 LYS A 743 REMARK 465 LEU A 744 REMARK 465 GLY A 745 REMARK 465 PHE A 746 REMARK 465 ASP A 747 REMARK 465 LEU A 748 REMARK 465 GLY A 749 REMARK 465 LYS A 750 REMARK 465 ALA A 751 REMARK 465 GLY A 752 REMARK 465 ALA A 753 REMARK 465 ASP A 754 REMARK 465 GLY A 755 REMARK 465 ASP A 756 REMARK 465 PHE A 757 REMARK 465 GLY A 758 REMARK 465 SER A 759 REMARK 465 LYS A 760 REMARK 465 THR A 761 REMARK 465 LYS A 762 REMARK 465 THR A 763 REMARK 465 ALA A 764 REMARK 465 ILE A 765 REMARK 465 GLU A 766 REMARK 465 GLN A 767 REMARK 465 PHE A 768 REMARK 465 GLN A 769 REMARK 465 LYS A 770 REMARK 465 SER A 771 REMARK 465 TYR A 772 REMARK 465 GLN A 773 REMARK 465 PRO A 774 REMARK 465 SER A 775 REMARK 465 HIS A 776 REMARK 465 GLN A 777 REMARK 465 THR A 778 REMARK 465 HIS A 779 REMARK 465 PRO A 780 REMARK 465 SER A 781 REMARK 465 TYR A 782 REMARK 465 SER A 783 REMARK 465 ILE A 784 REMARK 465 GLY A 785 REMARK 465 ALA A 786 REMARK 465 VAL A 787 REMARK 465 ASP A 788 REMARK 465 GLY A 789 REMARK 465 ILE A 790 REMARK 465 VAL A 791 REMARK 465 GLY A 792 REMARK 465 LYS A 793 REMARK 465 GLY A 794 REMARK 465 THR A 795 REMARK 465 LEU A 796 REMARK 465 LEU A 797 REMARK 465 ALA A 798 REMARK 465 LEU A 799 REMARK 465 ASP A 800 REMARK 465 GLU A 801 REMARK 465 ALA A 802 REMARK 465 LEU A 803 REMARK 465 MSE A 804 REMARK 465 ASP A 805 REMARK 465 GLY A 806 REMARK 465 TRP A 807 REMARK 465 VAL A 808 REMARK 465 TYR A 809 REMARK 465 GLU A 810 REMARK 465 ASN A 811 REMARK 465 ASN A 812 REMARK 465 ILE A 813 REMARK 465 TYR A 814 REMARK 465 GLN A 815 REMARK 465 HIS A 1013 REMARK 465 HIS A 1014 REMARK 465 HIS A 1015 REMARK 465 HIS A 1016 REMARK 465 HIS A 1017 REMARK 465 MSE B 24 REMARK 465 GLY B 25 REMARK 465 GLU B 26 REMARK 465 ASN B 27 REMARK 465 CYS B 28 REMARK 465 ASN B 29 REMARK 465 ASP B 30 REMARK 465 GLU B 125 REMARK 465 HIS B 126 REMARK 465 HIS B 127 REMARK 465 HIS B 128 REMARK 465 HIS B 129 REMARK 465 HIS B 130 REMARK 465 HIS B 131 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB ARG A 929 OE1 GLU A 1011 1.73 REMARK 500 CG ARG A 929 OE1 GLU A 1011 1.74 REMARK 500 O GLU A 1008 CG GLU A 1011 1.74 REMARK 500 NZ LYS A 975 O HOH A 1161 1.79 REMARK 500 CG GLU A 1008 OE2 GLU A 1011 1.86 REMARK 500 NZ LYS A 907 O HOH A 1151 1.92 REMARK 500 CD GLU A 1008 OE2 GLU A 1011 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 921 CD2 LEU B 124 2656 0.51 REMARK 500 NZ LYS A 921 CG LEU B 124 2656 1.10 REMARK 500 CE LYS A 921 CD2 LEU B 124 2656 1.71 REMARK 500 NZ LYS A 921 CD1 LEU B 124 2656 2.07 REMARK 500 NZ LYS A 921 CB LEU B 124 2656 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 910 -71.62 -137.73 REMARK 500 ASN A 928 -162.70 -118.27 REMARK 500 GLN A 957 117.11 -161.57 REMARK 500 SER A 961 6.12 84.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 960 SER A 961 -145.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NSR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE IMMUNITY PROTEIN DBREF 4NSO A 731 1009 UNP Q9KN42 Q9KN42_VIBCH 731 1009 DBREF 4NSO B 26 122 UNP Q9KN41 Q9KN41_VIBCH 26 122 SEQADV 4NSO MSE A 717 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO ALA A 718 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO SER A 719 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO MSE A 720 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO THR A 721 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO GLY A 722 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO GLY A 723 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO GLN A 724 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO GLN A 725 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO MSE A 726 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO GLY A 727 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO ARG A 728 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO GLY A 729 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO SER A 730 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO LEU A 1010 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO GLU A 1011 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO HIS A 1012 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO HIS A 1013 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO HIS A 1014 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO HIS A 1015 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO HIS A 1016 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO HIS A 1017 UNP Q9KN42 EXPRESSION TAG SEQADV 4NSO MSE B 24 UNP Q9KN41 EXPRESSION TAG SEQADV 4NSO GLY B 25 UNP Q9KN41 EXPRESSION TAG SEQADV 4NSO LEU B 123 UNP Q9KN41 EXPRESSION TAG SEQADV 4NSO LEU B 124 UNP Q9KN41 EXPRESSION TAG SEQADV 4NSO GLU B 125 UNP Q9KN41 EXPRESSION TAG SEQADV 4NSO HIS B 126 UNP Q9KN41 EXPRESSION TAG SEQADV 4NSO HIS B 127 UNP Q9KN41 EXPRESSION TAG SEQADV 4NSO HIS B 128 UNP Q9KN41 EXPRESSION TAG SEQADV 4NSO HIS B 129 UNP Q9KN41 EXPRESSION TAG SEQADV 4NSO HIS B 130 UNP Q9KN41 EXPRESSION TAG SEQADV 4NSO HIS B 131 UNP Q9KN41 EXPRESSION TAG SEQRES 1 A 301 MSE ALA SER MSE THR GLY GLY GLN GLN MSE GLY ARG GLY SEQRES 2 A 301 SER SER ASP GLU VAL LYS LEU LEU GLN GLU ALA LEU ILE SEQRES 3 A 301 LYS LEU GLY PHE ASP LEU GLY LYS ALA GLY ALA ASP GLY SEQRES 4 A 301 ASP PHE GLY SER LYS THR LYS THR ALA ILE GLU GLN PHE SEQRES 5 A 301 GLN LYS SER TYR GLN PRO SER HIS GLN THR HIS PRO SER SEQRES 6 A 301 TYR SER ILE GLY ALA VAL ASP GLY ILE VAL GLY LYS GLY SEQRES 7 A 301 THR LEU LEU ALA LEU ASP GLU ALA LEU MSE ASP GLY TRP SEQRES 8 A 301 VAL TYR GLU ASN ASN ILE TYR GLN ILE TRP PRO LEU GLY SEQRES 9 A 301 LYS THR SER GLU LYS TYR GLU SER ALA GLY ARG GLY PRO SEQRES 10 A 301 GLY VAL ILE SER THR GLY ASN GLY ASP TYR GLY GLY ALA SEQRES 11 A 301 SER TYR GLY CYS TYR GLN MSE SER SER ASN LEU GLY VAL SEQRES 12 A 301 VAL GLN LYS TYR ILE GLN SER SER LYS PHE LYS GLU PHE SEQRES 13 A 301 PHE SER GLY LEU ASN PRO ALA THR LYS GLU PHE ASN VAL SEQRES 14 A 301 VAL TRP GLN ASP ILE ALA SER ARG TYR PRO GLN GLU PHE SEQRES 15 A 301 ARG GLU GLU GLN HIS GLN PHE ILE LYS ARG THR HIS TYR SEQRES 16 A 301 ASP ILE GLN ILE GLY HIS LEU ARG GLY LYS GLY LEU LEU SEQRES 17 A 301 PHE GLU HIS ASN ARG ALA ALA VAL HIS ASP LEU ILE TRP SEQRES 18 A 301 SER THR SER VAL GLN PHE GLY GLY ARG THR ASN LEU ILE SEQRES 19 A 301 PHE ASN ALA LEU ASN GLY GLN ASN MSE GLU SER MSE THR SEQRES 20 A 301 ASP LYS ASP ILE ILE ILE LEU VAL GLN ASP TYR LYS LEU SEQRES 21 A 301 VAL ASN THR GLU ARG LEU PHE LYS SER SER PRO SER TRP SEQRES 22 A 301 TRP SER ASP LEU LYS LYS ARG ALA VAL SER GLU LYS LYS SEQRES 23 A 301 ALA LEU LEU GLU LEU GLU ILE LEU GLU HIS HIS HIS HIS SEQRES 24 A 301 HIS HIS SEQRES 1 B 108 MSE GLY GLU ASN CYS ASN ASP THR SER GLY VAL HIS GLN SEQRES 2 B 108 LYS ILE LEU VAL CYS ILE GLN ASN GLU ILE ALA LYS SER SEQRES 3 B 108 GLU THR GLN ILE ARG ASN ASN ILE SER SER LYS SER ILE SEQRES 4 B 108 ASP TYR GLY PHE PRO ASP ASP PHE TYR SER LYS GLN ARG SEQRES 5 B 108 LEU ALA ILE HIS GLU LYS CYS MSE LEU TYR ILE ASN VAL SEQRES 6 B 108 GLY GLY GLN ARG GLY GLU LEU LEU MSE ASN GLN CYS GLU SEQRES 7 B 108 LEU SER MSE LEU GLN GLY LEU ASP ILE TYR ILE GLN GLN SEQRES 8 B 108 TYR ILE GLU ASP VAL ASP ASN SER LEU LEU GLU HIS HIS SEQRES 9 B 108 HIS HIS HIS HIS MODRES 4NSO MSE A 853 MET SELENOMETHIONINE MODRES 4NSO MSE A 959 MET SELENOMETHIONINE MODRES 4NSO MSE A 962 MET SELENOMETHIONINE MODRES 4NSO MSE B 83 MET SELENOMETHIONINE MODRES 4NSO MSE B 97 MET SELENOMETHIONINE MODRES 4NSO MSE B 104 MET SELENOMETHIONINE HET MSE A 853 8 HET MSE A 959 8 HET MSE A 962 8 HET MSE B 83 8 HET MSE B 97 8 HET MSE B 104 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 HOH *107(H2 O) HELIX 1 1 GLY A 820 THR A 822 5 3 HELIX 2 2 SER A 823 SER A 828 1 6 HELIX 3 3 GLY A 858 SER A 867 1 10 HELIX 4 4 PHE A 869 SER A 874 5 6 HELIX 5 5 THR A 880 TYR A 894 1 15 HELIX 6 6 TYR A 894 HIS A 910 1 17 HELIX 7 7 HIS A 910 LYS A 921 1 12 HELIX 8 8 ARG A 929 GLY A 944 1 16 HELIX 9 9 ASN A 948 LEU A 954 1 7 HELIX 10 10 THR A 963 ASN A 978 1 16 HELIX 11 11 ASN A 978 PHE A 983 1 6 HELIX 12 12 SER A 986 SER A 988 5 3 HELIX 13 13 TRP A 989 HIS A 1012 1 24 HELIX 14 14 VAL B 34 SER B 59 1 26 HELIX 15 15 ASP B 69 LEU B 84 1 16 HELIX 16 16 TYR B 85 VAL B 88 5 4 HELIX 17 17 GLY B 89 ASN B 98 1 10 SHEET 1 A 3 ILE A 836 THR A 838 0 SHEET 2 A 3 ALA A 846 TYR A 848 -1 O SER A 847 N SER A 837 SHEET 3 A 3 MSE A 853 SER A 854 -1 O MSE A 853 N TYR A 848 LINK C MSE A 853 N SER A 854 1555 1555 1.33 LINK C ASN A 958 N MSE A 959 1555 1555 1.33 LINK C MSE A 959 N GLU A 960 1555 1555 1.32 LINK C SER A 961 N MSE A 962 1555 1555 1.33 LINK C MSE A 962 N THR A 963 1555 1555 1.33 LINK C CYS B 82 N MSE B 83 1555 1555 1.33 LINK C MSE B 83 N LEU B 84 1555 1555 1.33 LINK C LEU B 96 N MSE B 97 1555 1555 1.34 LINK C MSE B 97 N ASN B 98 1555 1555 1.34 LINK C SER B 103 N MSE B 104 1555 1555 1.34 LINK C MSE B 104 N LEU B 105 1555 1555 1.34 LINK C GLN A 852 N MSE A 853 1555 1555 1.33 CISPEP 1 GLU A 926 HIS A 927 0 -15.97 CRYST1 133.631 78.660 47.860 90.00 101.52 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007483 0.000000 0.001525 0.00000 SCALE2 0.000000 0.012713 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021323 0.00000