HEADER PROTEIN TRANSPORT 29-NOV-13 4NSW TITLE CRYSTAL STRUCTURE OF THE BAR-PH DOMAIN OF ACAP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARF-GAP WITH COILED-COIL, ANK REPEAT AND PH DOMAIN- COMPND 3 CONTAINING PROTEIN 1; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: UNP RESIDUES 1-377; COMPND 6 SYNONYM: CENTAURIN-BETA-1, CNT-B1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ACAP1, CENTB1, KIAA0050; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS COILED-COIL, BAR DOMAIN, PH DOMAIN, GTPASE ACTIVATION, PROTEIN KEYWDS 2 TRANSPORT, MEMBRANE REMODELING EXPDTA X-RAY DIFFRACTION AUTHOR X.PANG,K.ZHANG,J.MA,Q.ZHOU,F.SUN REVDAT 4 20-MAR-24 4NSW 1 SEQADV REVDAT 3 22-NOV-17 4NSW 1 REMARK REVDAT 2 22-OCT-14 4NSW 1 JRNL REVDAT 1 15-OCT-14 4NSW 0 JRNL AUTH X.PANG,J.FAN,Y.ZHANG,K.ZHANG,B.GAO,J.MA,J.LI,Y.DENG,Q.ZHOU, JRNL AUTH 2 E.H.EGELMAN,V.W.HSU,F.SUN JRNL TITL A PH DOMAIN IN ACAP1 POSSESSES KEY FEATURES OF THE BAR JRNL TITL 2 DOMAIN IN PROMOTING MEMBRANE CURVATURE JRNL REF DEV.CELL V. 31 73 2014 JRNL REFN ISSN 1534-5807 JRNL PMID 25284369 JRNL DOI 10.1016/J.DEVCEL.2014.08.020 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 39141 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2059 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2649 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 156 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5839 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.57000 REMARK 3 B22 (A**2) : 3.62000 REMARK 3 B33 (A**2) : -2.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.302 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.236 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.179 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.900 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5935 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7986 ; 1.459 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 728 ; 6.026 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 295 ;36.279 ;23.186 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1114 ;20.492 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 66 ;19.053 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 884 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4461 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3630 ; 0.670 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5808 ; 1.284 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2305 ; 2.227 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2178 ; 3.728 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -3 A 250 REMARK 3 ORIGIN FOR THE GROUP (A): -15.6157 -1.3411 32.4278 REMARK 3 T TENSOR REMARK 3 T11: 0.1129 T22: 0.0912 REMARK 3 T33: 0.0986 T12: -0.0064 REMARK 3 T13: 0.1000 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 7.4414 L22: 0.5072 REMARK 3 L33: 3.1095 L12: -0.9379 REMARK 3 L13: 4.1793 L23: -0.3464 REMARK 3 S TENSOR REMARK 3 S11: 0.0591 S12: -0.3899 S13: 0.0035 REMARK 3 S21: -0.0020 S22: -0.0532 S23: 0.0088 REMARK 3 S31: -0.0058 S32: -0.1774 S33: -0.0059 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 250 REMARK 3 ORIGIN FOR THE GROUP (A): 11.0239 -8.3792 46.2037 REMARK 3 T TENSOR REMARK 3 T11: 0.1822 T22: 0.1512 REMARK 3 T33: 0.1303 T12: -0.0125 REMARK 3 T13: 0.0583 T23: 0.0374 REMARK 3 L TENSOR REMARK 3 L11: 4.7170 L22: 0.7811 REMARK 3 L33: 1.5940 L12: -1.4637 REMARK 3 L13: 2.0960 L23: -0.6544 REMARK 3 S TENSOR REMARK 3 S11: 0.0938 S12: -0.3448 S13: -0.0895 REMARK 3 S21: 0.0648 S22: -0.0007 S23: -0.0349 REMARK 3 S31: 0.1678 S32: 0.0325 S33: -0.0931 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 251 A 364 REMARK 3 ORIGIN FOR THE GROUP (A): 40.2939 -35.9722 82.2715 REMARK 3 T TENSOR REMARK 3 T11: 0.5358 T22: 0.2275 REMARK 3 T33: 0.2271 T12: 0.1038 REMARK 3 T13: -0.1365 T23: 0.0343 REMARK 3 L TENSOR REMARK 3 L11: 5.8697 L22: 4.9024 REMARK 3 L33: 10.3702 L12: 0.0810 REMARK 3 L13: -0.5761 L23: -3.4347 REMARK 3 S TENSOR REMARK 3 S11: 0.1478 S12: 0.0479 S13: -0.1296 REMARK 3 S21: -0.1963 S22: -0.1195 S23: -0.0396 REMARK 3 S31: 0.7290 S32: 0.4054 S33: -0.0283 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 251 B 361 REMARK 3 ORIGIN FOR THE GROUP (A): -46.8866 2.0681 -12.8652 REMARK 3 T TENSOR REMARK 3 T11: 0.5184 T22: 0.2850 REMARK 3 T33: 0.3011 T12: 0.1013 REMARK 3 T13: -0.1676 T23: 0.0224 REMARK 3 L TENSOR REMARK 3 L11: 2.2589 L22: 9.0011 REMARK 3 L33: 4.0609 L12: 1.4655 REMARK 3 L13: 0.1477 L23: 2.6397 REMARK 3 S TENSOR REMARK 3 S11: -0.4353 S12: 0.4440 S13: 0.5067 REMARK 3 S21: -1.4671 S22: 0.0217 S23: 0.6167 REMARK 3 S31: -0.8487 S32: -0.1075 S33: 0.4135 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 401 A 479 REMARK 3 RESIDUE RANGE : B 401 B 467 REMARK 3 ORIGIN FOR THE GROUP (A): -9.5988 -5.6709 31.8679 REMARK 3 T TENSOR REMARK 3 T11: 0.2339 T22: 0.3688 REMARK 3 T33: 0.2676 T12: 0.0089 REMARK 3 T13: 0.0963 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 1.4967 L22: 0.2283 REMARK 3 L33: 0.6509 L12: -0.2835 REMARK 3 L13: 0.9680 L23: -0.1566 REMARK 3 S TENSOR REMARK 3 S11: 0.0936 S12: -0.0085 S13: 0.0946 REMARK 3 S21: -0.0411 S22: -0.1233 S23: -0.0364 REMARK 3 S31: 0.1058 S32: -0.0015 S33: 0.0297 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4NSW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083614. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-09; 09-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY; PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A; BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000; 0.97900 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL; REMARK 200 NUMERICAL LINK TYPE SI(111) REMARK 200 DOUBLE CRYSTAL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R; ADSC QUANTUM REMARK 200 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41826 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 29.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.41800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.960 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE, OASIS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM CITRATE, 10% PEG3350, REMARK 280 6.0MM OCTYL BETA-THIOGLUCOPYRANOSIDE, PH 7.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.86000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -92.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 GLN A 365 REMARK 465 ALA A 366 REMARK 465 ARG A 367 REMARK 465 LEU A 368 REMARK 465 ASP A 369 REMARK 465 ASP A 370 REMARK 465 SER A 371 REMARK 465 PRO A 372 REMARK 465 ARG A 373 REMARK 465 GLY A 374 REMARK 465 PRO A 375 REMARK 465 GLY A 376 REMARK 465 GLN A 377 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 GLY B -1 REMARK 465 ALA B 362 REMARK 465 PHE B 363 REMARK 465 SER B 364 REMARK 465 GLN B 365 REMARK 465 ALA B 366 REMARK 465 ARG B 367 REMARK 465 LEU B 368 REMARK 465 ASP B 369 REMARK 465 ASP B 370 REMARK 465 SER B 371 REMARK 465 PRO B 372 REMARK 465 ARG B 373 REMARK 465 GLY B 374 REMARK 465 PRO B 375 REMARK 465 GLY B 376 REMARK 465 GLN B 377 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 402 O HOH B 410 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 121 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 0 -49.88 -171.33 REMARK 500 ASP A 65 -60.86 -28.26 REMARK 500 LYS A 114 -92.64 -87.99 REMARK 500 ARG A 146 -76.39 -37.83 REMARK 500 GLN A 247 -83.89 -72.12 REMARK 500 GLU A 249 -134.82 -103.10 REMARK 500 LEU A 250 142.47 -37.03 REMARK 500 GLU A 261 146.78 63.99 REMARK 500 SER A 277 55.41 -90.14 REMARK 500 ASN A 278 65.86 -158.30 REMARK 500 LYS A 281 25.84 92.41 REMARK 500 LYS B 114 -99.31 -106.22 REMARK 500 LYS B 248 -35.70 -130.52 REMARK 500 LEU B 250 -71.61 -84.74 REMARK 500 REMARK 500 REMARK: NULL DBREF 4NSW A 1 377 UNP Q15027 ACAP1_HUMAN 1 377 DBREF 4NSW B 1 377 UNP Q15027 ACAP1_HUMAN 1 377 SEQADV 4NSW GLY A -4 UNP Q15027 EXPRESSION TAG SEQADV 4NSW PRO A -3 UNP Q15027 EXPRESSION TAG SEQADV 4NSW LEU A -2 UNP Q15027 EXPRESSION TAG SEQADV 4NSW GLY A -1 UNP Q15027 EXPRESSION TAG SEQADV 4NSW SER A 0 UNP Q15027 EXPRESSION TAG SEQADV 4NSW GLY B -4 UNP Q15027 EXPRESSION TAG SEQADV 4NSW PRO B -3 UNP Q15027 EXPRESSION TAG SEQADV 4NSW LEU B -2 UNP Q15027 EXPRESSION TAG SEQADV 4NSW GLY B -1 UNP Q15027 EXPRESSION TAG SEQADV 4NSW SER B 0 UNP Q15027 EXPRESSION TAG SEQRES 1 A 382 GLY PRO LEU GLY SER MET THR VAL LYS LEU ASP PHE GLU SEQRES 2 A 382 GLU CYS LEU LYS ASP SER PRO ARG PHE ARG ALA SER ILE SEQRES 3 A 382 GLU LEU VAL GLU ALA GLU VAL SER GLU LEU GLU THR ARG SEQRES 4 A 382 LEU GLU LYS LEU LEU LYS LEU GLY THR GLY LEU LEU GLU SEQRES 5 A 382 SER GLY ARG HIS TYR LEU ALA ALA SER ARG ALA PHE VAL SEQRES 6 A 382 VAL GLY ILE CYS ASP LEU ALA ARG LEU GLY PRO PRO GLU SEQRES 7 A 382 PRO MET MET ALA GLU CYS LEU GLU LYS PHE THR VAL SER SEQRES 8 A 382 LEU ASN HIS LYS LEU ASP SER HIS ALA GLU LEU LEU ASP SEQRES 9 A 382 ALA THR GLN HIS THR LEU GLN GLN GLN ILE GLN THR LEU SEQRES 10 A 382 VAL LYS GLU GLY LEU ARG GLY PHE ARG GLU ALA ARG ARG SEQRES 11 A 382 ASP PHE TRP ARG GLY ALA GLU SER LEU GLU ALA ALA LEU SEQRES 12 A 382 THR HIS ASN ALA GLU VAL PRO ARG ARG ARG ALA GLN GLU SEQRES 13 A 382 ALA GLU GLU ALA GLY ALA ALA LEU ARG THR ALA ARG ALA SEQRES 14 A 382 GLY TYR ARG GLY ARG ALA LEU ASP TYR ALA LEU GLN ILE SEQRES 15 A 382 ASN VAL ILE GLU ASP LYS ARG LYS PHE ASP ILE MET GLU SEQRES 16 A 382 PHE VAL LEU ARG LEU VAL GLU ALA GLN ALA THR HIS PHE SEQRES 17 A 382 GLN GLN GLY HIS GLU GLU LEU SER ARG LEU SER GLN TYR SEQRES 18 A 382 ARG LYS GLU LEU GLY ALA GLN LEU HIS GLN LEU VAL LEU SEQRES 19 A 382 ASN SER ALA ARG GLU LYS ARG ASP MET GLU GLN ARG HIS SEQRES 20 A 382 VAL LEU LEU LYS GLN LYS GLU LEU GLY GLY GLU GLU PRO SEQRES 21 A 382 GLU PRO SER LEU ARG GLU GLY PRO GLY GLY LEU VAL MET SEQRES 22 A 382 GLU GLY HIS LEU PHE LYS ARG ALA SER ASN ALA PHE LYS SEQRES 23 A 382 THR TRP SER ARG ARG TRP PHE THR ILE GLN SER ASN GLN SEQRES 24 A 382 LEU VAL TYR GLN LYS LYS TYR LYS ASP PRO VAL THR VAL SEQRES 25 A 382 VAL VAL ASP ASP LEU ARG LEU CYS THR VAL LYS LEU CYS SEQRES 26 A 382 PRO ASP SER GLU ARG ARG PHE CYS PHE GLU VAL VAL SER SEQRES 27 A 382 THR SER LYS SER CYS LEU LEU GLN ALA ASP SER GLU ARG SEQRES 28 A 382 LEU LEU GLN LEU TRP VAL SER ALA VAL GLN SER SER ILE SEQRES 29 A 382 ALA SER ALA PHE SER GLN ALA ARG LEU ASP ASP SER PRO SEQRES 30 A 382 ARG GLY PRO GLY GLN SEQRES 1 B 382 GLY PRO LEU GLY SER MET THR VAL LYS LEU ASP PHE GLU SEQRES 2 B 382 GLU CYS LEU LYS ASP SER PRO ARG PHE ARG ALA SER ILE SEQRES 3 B 382 GLU LEU VAL GLU ALA GLU VAL SER GLU LEU GLU THR ARG SEQRES 4 B 382 LEU GLU LYS LEU LEU LYS LEU GLY THR GLY LEU LEU GLU SEQRES 5 B 382 SER GLY ARG HIS TYR LEU ALA ALA SER ARG ALA PHE VAL SEQRES 6 B 382 VAL GLY ILE CYS ASP LEU ALA ARG LEU GLY PRO PRO GLU SEQRES 7 B 382 PRO MET MET ALA GLU CYS LEU GLU LYS PHE THR VAL SER SEQRES 8 B 382 LEU ASN HIS LYS LEU ASP SER HIS ALA GLU LEU LEU ASP SEQRES 9 B 382 ALA THR GLN HIS THR LEU GLN GLN GLN ILE GLN THR LEU SEQRES 10 B 382 VAL LYS GLU GLY LEU ARG GLY PHE ARG GLU ALA ARG ARG SEQRES 11 B 382 ASP PHE TRP ARG GLY ALA GLU SER LEU GLU ALA ALA LEU SEQRES 12 B 382 THR HIS ASN ALA GLU VAL PRO ARG ARG ARG ALA GLN GLU SEQRES 13 B 382 ALA GLU GLU ALA GLY ALA ALA LEU ARG THR ALA ARG ALA SEQRES 14 B 382 GLY TYR ARG GLY ARG ALA LEU ASP TYR ALA LEU GLN ILE SEQRES 15 B 382 ASN VAL ILE GLU ASP LYS ARG LYS PHE ASP ILE MET GLU SEQRES 16 B 382 PHE VAL LEU ARG LEU VAL GLU ALA GLN ALA THR HIS PHE SEQRES 17 B 382 GLN GLN GLY HIS GLU GLU LEU SER ARG LEU SER GLN TYR SEQRES 18 B 382 ARG LYS GLU LEU GLY ALA GLN LEU HIS GLN LEU VAL LEU SEQRES 19 B 382 ASN SER ALA ARG GLU LYS ARG ASP MET GLU GLN ARG HIS SEQRES 20 B 382 VAL LEU LEU LYS GLN LYS GLU LEU GLY GLY GLU GLU PRO SEQRES 21 B 382 GLU PRO SER LEU ARG GLU GLY PRO GLY GLY LEU VAL MET SEQRES 22 B 382 GLU GLY HIS LEU PHE LYS ARG ALA SER ASN ALA PHE LYS SEQRES 23 B 382 THR TRP SER ARG ARG TRP PHE THR ILE GLN SER ASN GLN SEQRES 24 B 382 LEU VAL TYR GLN LYS LYS TYR LYS ASP PRO VAL THR VAL SEQRES 25 B 382 VAL VAL ASP ASP LEU ARG LEU CYS THR VAL LYS LEU CYS SEQRES 26 B 382 PRO ASP SER GLU ARG ARG PHE CYS PHE GLU VAL VAL SER SEQRES 27 B 382 THR SER LYS SER CYS LEU LEU GLN ALA ASP SER GLU ARG SEQRES 28 B 382 LEU LEU GLN LEU TRP VAL SER ALA VAL GLN SER SER ILE SEQRES 29 B 382 ALA SER ALA PHE SER GLN ALA ARG LEU ASP ASP SER PRO SEQRES 30 B 382 ARG GLY PRO GLY GLN FORMUL 3 HOH *146(H2 O) HELIX 1 1 ASP A 6 ASP A 13 1 8 HELIX 2 2 SER A 14 LEU A 69 1 56 HELIX 3 3 GLU A 73 LYS A 114 1 42 HELIX 4 4 LEU A 117 VAL A 144 1 28 HELIX 5 5 ARG A 148 LEU A 213 1 66 HELIX 6 6 LEU A 213 GLU A 249 1 37 HELIX 7 7 ASP A 311 ARG A 313 5 3 HELIX 8 8 SER A 344 ALA A 362 1 19 HELIX 9 9 ASP B 6 ASP B 13 1 8 HELIX 10 10 SER B 14 ARG B 68 1 55 HELIX 11 11 GLU B 73 GLN B 108 1 36 HELIX 12 12 GLN B 108 LYS B 114 1 7 HELIX 13 13 LEU B 117 VAL B 144 1 28 HELIX 14 14 GLN B 150 LEU B 213 1 64 HELIX 15 15 LEU B 213 GLU B 249 1 37 HELIX 16 16 ASP B 311 CYS B 315 5 5 HELIX 17 17 SER B 344 ILE B 359 1 16 SHEET 1 A 5 SER A 258 ARG A 260 0 SHEET 2 A 5 VAL A 267 ARG A 275 -1 O GLU A 269 N SER A 258 SHEET 3 A 5 TRP A 283 GLN A 291 -1 O ILE A 290 N MET A 268 SHEET 4 A 5 GLN A 294 GLN A 298 -1 O GLN A 298 N TRP A 287 SHEET 5 A 5 THR A 306 VAL A 309 -1 O VAL A 308 N LEU A 295 SHEET 1 B 5 SER A 258 ARG A 260 0 SHEET 2 B 5 VAL A 267 ARG A 275 -1 O GLU A 269 N SER A 258 SHEET 3 B 5 SER A 337 GLN A 341 -1 O GLN A 341 N PHE A 273 SHEET 4 B 5 CYS A 328 SER A 333 -1 N PHE A 329 O LEU A 340 SHEET 5 B 5 CYS A 315 LEU A 319 -1 N LYS A 318 O GLU A 330 SHEET 1 C 5 ARG B 260 GLY B 262 0 SHEET 2 C 5 GLY B 265 ARG B 275 -1 O VAL B 267 N ARG B 260 SHEET 3 C 5 TRP B 283 GLN B 291 -1 O ILE B 290 N MET B 268 SHEET 4 C 5 GLN B 294 GLN B 298 -1 O VAL B 296 N THR B 289 SHEET 5 C 5 THR B 306 VAL B 309 -1 O THR B 306 N TYR B 297 SHEET 1 D 5 ARG B 260 GLY B 262 0 SHEET 2 D 5 GLY B 265 ARG B 275 -1 O VAL B 267 N ARG B 260 SHEET 3 D 5 SER B 337 GLN B 341 -1 O GLN B 341 N PHE B 273 SHEET 4 D 5 CYS B 328 VAL B 332 -1 N PHE B 329 O LEU B 340 SHEET 5 D 5 THR B 316 LEU B 319 -1 N LYS B 318 O GLU B 330 CRYST1 42.460 59.720 168.950 90.00 91.40 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023552 0.000000 0.000576 0.00000 SCALE2 0.000000 0.016745 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005921 0.00000