HEADER TRANSPORT PROTEIN 29-NOV-13 4NT2 TITLE CRYSTAL STRUCTURE OF ARABIDOPSIS ACD11 (ACCELERATED-CELL-DEATH 11) TITLE 2 COMPLEXED WITH LYSO-SPHINGOMYELIN (D18:1) AT 2.4 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACCELERATED-CELL-DEATH 11; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GLYCOLIPID TRANSFER PROTEIN, AT2G34690; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: ACD11, AT2G34690; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-SUMO KEYWDS PROTEIN-LIPID COMPLEXES, GLTP-FOLD, LIPID TRANSFER PROTEIN, CELL KEYWDS 2 DEATH, LYSOSM, LYSOSPHINGOMYELIN, CERAMIDE-1-PHOSPHATE, C1P, KEYWDS 3 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.K.SIMANSHU,R.E.BROWN,D.J.PATEL REVDAT 4 20-SEP-23 4NT2 1 REMARK SEQADV REVDAT 3 22-NOV-17 4NT2 1 REMARK REVDAT 2 19-FEB-14 4NT2 1 JRNL REVDAT 1 05-FEB-14 4NT2 0 JRNL AUTH D.K.SIMANSHU,X.ZHAI,D.MUNCH,D.HOFIUS,J.E.MARKHAM, JRNL AUTH 2 J.BIELAWSKI,A.BIELAWSKA,L.MALININA,J.G.MOLOTKOVSKY, JRNL AUTH 3 J.W.MUNDY,D.J.PATEL,R.E.BROWN JRNL TITL ARABIDOPSIS ACCELERATED CELL DEATH 11, ACD11, IS A JRNL TITL 2 CERAMIDE-1-PHOSPHATE TRANSFER PROTEIN AND INTERMEDIARY JRNL TITL 3 REGULATOR OF PHYTOCERAMIDE LEVELS. JRNL REF CELL REP V. 6 388 2014 JRNL REFN ESSN 2211-1247 JRNL PMID 24412362 JRNL DOI 10.1016/J.CELREP.2013.12.023 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 14519 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.6259 - 4.1074 1.00 3018 131 0.1740 0.1844 REMARK 3 2 4.1074 - 3.2609 1.00 2814 153 0.1814 0.2111 REMARK 3 3 3.2609 - 2.8489 1.00 2767 155 0.2178 0.2777 REMARK 3 4 2.8489 - 2.5885 1.00 2749 149 0.2098 0.2781 REMARK 3 5 2.5885 - 2.4030 0.89 2433 150 0.2343 0.2533 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.00 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1658 REMARK 3 ANGLE : 0.786 2241 REMARK 3 CHIRALITY : 0.053 253 REMARK 3 PLANARITY : 0.004 271 REMARK 3 DIHEDRAL : 12.890 628 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -33.6985 -27.2843 5.0594 REMARK 3 T TENSOR REMARK 3 T11: 0.1011 T22: 0.1334 REMARK 3 T33: 0.0956 T12: 0.0037 REMARK 3 T13: 0.0505 T23: -0.0549 REMARK 3 L TENSOR REMARK 3 L11: 2.3566 L22: 1.6846 REMARK 3 L33: 0.9197 L12: 0.2776 REMARK 3 L13: -0.3273 L23: -0.5959 REMARK 3 S TENSOR REMARK 3 S11: 0.0351 S12: 0.0873 S13: 0.1663 REMARK 3 S21: 0.0709 S22: 0.1092 S23: -0.1315 REMARK 3 S31: -0.0588 S32: -0.0566 S33: 0.0372 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NT2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083620. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(220) SIDE BOUNCE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14869 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.45100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.960 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 4NT1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS, PH 6.5, 2 M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.50350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 52.50350 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.50350 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 52.50350 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 52.50350 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 52.50350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 451 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 466 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 12 CE NZ REMARK 470 LYS A 93 CG CD CE NZ REMARK 470 LYS A 128 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 61 -57.07 -131.30 REMARK 500 SER A 121 31.48 -97.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SPU A 302 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPU A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SPU A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 309 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NT1 RELATED DB: PDB REMARK 900 RELATED ID: 4NTG RELATED DB: PDB REMARK 900 RELATED ID: 4NTI RELATED DB: PDB REMARK 900 RELATED ID: 4NTO RELATED DB: PDB DBREF 4NT2 A 1 206 UNP O64587 O64587_ARATH 1 206 SEQADV 4NT2 SER A 0 UNP O64587 EXPRESSION TAG SEQRES 1 A 207 SER MET ALA ASP SER GLU ALA ASP LYS PRO LEU ARG LYS SEQRES 2 A 207 ILE SER ALA ALA PHE LYS LYS LEU ALA ILE ILE VAL ASN SEQRES 3 A 207 SER PRO ASN PRO GLU VAL PRO VAL THR GLN PHE SER HIS SEQRES 4 A 207 ALA CYS SER LEU VAL SER PRO LEU PHE GLY CYS LEU GLY SEQRES 5 A 207 ILE ALA PHE LYS PHE ALA GLU MET ASP TYR VAL ALA LYS SEQRES 6 A 207 VAL ASP ASP LEU VAL ARG ALA SER SER SER ILE SER THR SEQRES 7 A 207 LEU VAL VAL MET MET ASP LYS ASP ILE GLU ALA ASP CYS SEQRES 8 A 207 VAL ARG LYS ALA GLY SER HIS THR ARG ASN LEU LEU ARG SEQRES 9 A 207 VAL LYS ARG GLY LEU ASP MET VAL LYS VAL LEU PHE GLU SEQRES 10 A 207 GLN ILE ILE ALA SER GLU GLY ASP ASN SER LEU LYS ASP SEQRES 11 A 207 PRO ALA THR LYS SER TYR ALA GLN VAL PHE ALA PRO HIS SEQRES 12 A 207 HIS GLY TRP ALA ILE ARG LYS ALA VAL SER LEU GLY MET SEQRES 13 A 207 TYR ALA LEU PRO THR ARG ALA HIS LEU LEU ASN MET LEU SEQRES 14 A 207 LYS GLU ASP GLU ALA ALA ALA LYS ILE HIS MET GLN SER SEQRES 15 A 207 TYR VAL ASN SER SER ALA PRO LEU ILE THR TYR LEU ASP SEQRES 16 A 207 ASN LEU PHE LEU SER LYS GLN LEU GLY ILE ASP TRP HET SPU A 301 31 HET SPU A 302 24 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET EDO A 308 4 HET EDO A 309 4 HETNAM SPU 2-{[(R)-{[(2S,3R,4E)-2-AMINO-3-HYDROXYOCTADEC-4-EN-1- HETNAM 2 SPU YL]OXY}(HYDROXY)PHOSPHORYL]OXY}-N,N,N- HETNAM 3 SPU TRIMETHYLETHANAMINIUM HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN SPU SPHINGOSYLPHOSPHORYLCHOLINE, SPHINGOSINE HETSYN 2 SPU PHOSPHORYLCHOLINE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 SPU 2(C23 H50 N2 O5 P 1+) FORMUL 4 SO4 5(O4 S 2-) FORMUL 9 EDO 2(C2 H6 O2) FORMUL 11 HOH *77(H2 O) HELIX 1 1 LYS A 8 SER A 26 1 19 HELIX 2 2 PRO A 32 LEU A 42 1 11 HELIX 3 3 VAL A 43 GLY A 51 1 9 HELIX 4 4 ILE A 52 LYS A 55 5 4 HELIX 5 5 PHE A 56 TYR A 61 1 6 HELIX 6 6 TYR A 61 SER A 72 1 12 HELIX 7 7 THR A 77 ALA A 88 1 12 HELIX 8 8 SER A 96 SER A 121 1 26 HELIX 9 9 LEU A 127 PHE A 139 1 13 HELIX 10 10 ALA A 140 HIS A 143 5 4 HELIX 11 11 GLY A 144 MET A 155 1 12 HELIX 12 12 TYR A 156 LEU A 158 5 3 HELIX 13 13 THR A 160 LYS A 169 1 10 HELIX 14 14 ASP A 171 SER A 199 1 29 SITE 1 AC1 8 ASP A 60 HIS A 143 GLY A 144 ILE A 147 SITE 2 AC1 8 LEU A 153 SPU A 302 SO4 A 307 HOH A 426 SITE 1 AC2 7 TRP A 145 ILE A 147 LYS A 149 TYR A 156 SITE 2 AC2 7 SPU A 301 SO4 A 304 SO4 A 307 SITE 1 AC3 4 LYS A 64 ARG A 99 ARG A 103 HOH A 475 SITE 1 AC4 3 ARG A 148 LYS A 149 SPU A 302 SITE 1 AC5 2 SER A 181 ASN A 184 SITE 1 AC6 1 ARG A 11 SITE 1 AC7 4 TRP A 145 ARG A 148 SPU A 301 SPU A 302 SITE 1 AC8 6 ILE A 52 ALA A 53 PHE A 54 LYS A 55 SITE 2 AC8 6 PHE A 56 VAL A 151 SITE 1 AC9 4 VAL A 79 ASP A 83 LEU A 196 LYS A 200 CRYST1 108.827 108.827 105.007 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009189 0.005305 0.000000 0.00000 SCALE2 0.000000 0.010610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009523 0.00000