data_4NVG # _entry.id 4NVG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4NVG RCSB RCSB083705 WWPDB D_1000083705 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4NVA . unspecified PDB 4NVB . unspecified PDB 4NVC . unspecified PDB 4NVD . unspecified PDB 4NVE . unspecified PDB 4NVF . unspecified PDB 4NVH . unspecified PDB 4NVI . unspecified PDB 4NVJ . unspecified PDB 4NVK . unspecified PDB 4NVL . unspecified PDB 4NVM . unspecified PDB 4NVN . unspecified PDB 4NVO . unspecified # _pdbx_database_status.entry_id 4NVG _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-12-05 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fischer, M.' 1 'Fraser, J.S.' 2 # _citation.id primary _citation.title 'Incorporation of protein flexibility and conformational energy penalties in docking screens to improve ligand discovery.' _citation.journal_abbrev 'Nat Chem' _citation.journal_volume 6 _citation.page_first 575 _citation.page_last 583 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1755-4330 _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24950326 _citation.pdbx_database_id_DOI 10.1038/nchem.1954 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fischer, M.' 1 primary 'Coleman, R.G.' 2 primary 'Fraser, J.S.' 3 primary 'Shoichet, B.K.' 4 # _cell.length_a 50.650 _cell.length_b 70.390 _cell.length_c 101.940 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4NVG _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 4NVG _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cytochrome c peroxidase' 32928.582 1 ? 'P190G, W191G, DELETIONS G192-A193' 'UNP RESIDUES 72-362' ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 3 non-polymer syn 'ethyl 4-aminoquinoline-3-carboxylate' 216.236 1 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 5 non-polymer syn '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 195.237 1 ? ? ? ? 6 water nat water 18.015 190 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;LVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNA GLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNM NDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYL SIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL ; _entity_poly.pdbx_seq_one_letter_code_can ;LVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNA GLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNM NDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYL SIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL ; _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 VAL n 1 3 HIS n 1 4 VAL n 1 5 ALA n 1 6 SER n 1 7 VAL n 1 8 GLU n 1 9 LYS n 1 10 GLY n 1 11 ARG n 1 12 SER n 1 13 TYR n 1 14 GLU n 1 15 ASP n 1 16 PHE n 1 17 GLN n 1 18 LYS n 1 19 VAL n 1 20 TYR n 1 21 ASN n 1 22 ALA n 1 23 ILE n 1 24 ALA n 1 25 LEU n 1 26 LYS n 1 27 LEU n 1 28 ARG n 1 29 GLU n 1 30 ASP n 1 31 ASP n 1 32 GLU n 1 33 TYR n 1 34 ASP n 1 35 ASN n 1 36 TYR n 1 37 ILE n 1 38 GLY n 1 39 TYR n 1 40 GLY n 1 41 PRO n 1 42 VAL n 1 43 LEU n 1 44 VAL n 1 45 ARG n 1 46 LEU n 1 47 ALA n 1 48 TRP n 1 49 HIS n 1 50 ILE n 1 51 SER n 1 52 GLY n 1 53 THR n 1 54 TRP n 1 55 ASP n 1 56 LYS n 1 57 HIS n 1 58 ASP n 1 59 ASN n 1 60 THR n 1 61 GLY n 1 62 GLY n 1 63 SER n 1 64 TYR n 1 65 GLY n 1 66 GLY n 1 67 THR n 1 68 TYR n 1 69 ARG n 1 70 PHE n 1 71 LYS n 1 72 LYS n 1 73 GLU n 1 74 PHE n 1 75 ASN n 1 76 ASP n 1 77 PRO n 1 78 SER n 1 79 ASN n 1 80 ALA n 1 81 GLY n 1 82 LEU n 1 83 GLN n 1 84 ASN n 1 85 GLY n 1 86 PHE n 1 87 LYS n 1 88 PHE n 1 89 LEU n 1 90 GLU n 1 91 PRO n 1 92 ILE n 1 93 HIS n 1 94 LYS n 1 95 GLU n 1 96 PHE n 1 97 PRO n 1 98 TRP n 1 99 ILE n 1 100 SER n 1 101 SER n 1 102 GLY n 1 103 ASP n 1 104 LEU n 1 105 PHE n 1 106 SER n 1 107 LEU n 1 108 GLY n 1 109 GLY n 1 110 VAL n 1 111 THR n 1 112 ALA n 1 113 VAL n 1 114 GLN n 1 115 GLU n 1 116 MET n 1 117 GLN n 1 118 GLY n 1 119 PRO n 1 120 LYS n 1 121 ILE n 1 122 PRO n 1 123 TRP n 1 124 ARG n 1 125 CYS n 1 126 GLY n 1 127 ARG n 1 128 VAL n 1 129 ASP n 1 130 THR n 1 131 PRO n 1 132 GLU n 1 133 ASP n 1 134 THR n 1 135 THR n 1 136 PRO n 1 137 ASP n 1 138 ASN n 1 139 GLY n 1 140 ARG n 1 141 LEU n 1 142 PRO n 1 143 ASP n 1 144 ALA n 1 145 ASP n 1 146 LYS n 1 147 ASP n 1 148 ALA n 1 149 GLY n 1 150 TYR n 1 151 VAL n 1 152 ARG n 1 153 THR n 1 154 PHE n 1 155 PHE n 1 156 GLN n 1 157 ARG n 1 158 LEU n 1 159 ASN n 1 160 MET n 1 161 ASN n 1 162 ASP n 1 163 ARG n 1 164 GLU n 1 165 VAL n 1 166 VAL n 1 167 ALA n 1 168 LEU n 1 169 MET n 1 170 GLY n 1 171 ALA n 1 172 HIS n 1 173 ALA n 1 174 LEU n 1 175 GLY n 1 176 LYS n 1 177 THR n 1 178 HIS n 1 179 LEU n 1 180 LYS n 1 181 ASN n 1 182 SER n 1 183 GLY n 1 184 TYR n 1 185 GLU n 1 186 GLY n 1 187 GLY n 1 188 GLY n 1 189 ALA n 1 190 ASN n 1 191 ASN n 1 192 VAL n 1 193 PHE n 1 194 THR n 1 195 ASN n 1 196 GLU n 1 197 PHE n 1 198 TYR n 1 199 LEU n 1 200 ASN n 1 201 LEU n 1 202 LEU n 1 203 ASN n 1 204 GLU n 1 205 ASP n 1 206 TRP n 1 207 LYS n 1 208 LEU n 1 209 GLU n 1 210 LYS n 1 211 ASN n 1 212 ASP n 1 213 ALA n 1 214 ASN n 1 215 ASN n 1 216 GLU n 1 217 GLN n 1 218 TRP n 1 219 ASP n 1 220 SER n 1 221 LYS n 1 222 SER n 1 223 GLY n 1 224 TYR n 1 225 MET n 1 226 MET n 1 227 LEU n 1 228 PRO n 1 229 THR n 1 230 ASP n 1 231 TYR n 1 232 SER n 1 233 LEU n 1 234 ILE n 1 235 GLN n 1 236 ASP n 1 237 PRO n 1 238 LYS n 1 239 TYR n 1 240 LEU n 1 241 SER n 1 242 ILE n 1 243 VAL n 1 244 LYS n 1 245 GLU n 1 246 TYR n 1 247 ALA n 1 248 ASN n 1 249 ASP n 1 250 GLN n 1 251 ASP n 1 252 LYS n 1 253 PHE n 1 254 PHE n 1 255 LYS n 1 256 ASP n 1 257 PHE n 1 258 SER n 1 259 LYS n 1 260 ALA n 1 261 PHE n 1 262 GLU n 1 263 LYS n 1 264 LEU n 1 265 LEU n 1 266 GLU n 1 267 ASN n 1 268 GLY n 1 269 ILE n 1 270 THR n 1 271 PHE n 1 272 PRO n 1 273 LYS n 1 274 ASP n 1 275 ALA n 1 276 PRO n 1 277 SER n 1 278 PRO n 1 279 PHE n 1 280 ILE n 1 281 PHE n 1 282 LYS n 1 283 THR n 1 284 LEU n 1 285 GLU n 1 286 GLU n 1 287 GLN n 1 288 GLY n 1 289 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CCP1 CCP CPO YKR066C, SCRG_04081' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RM11-1A _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 285006 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B3LRE1_YEAS1 _struct_ref.pdbx_db_accession B3LRE1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNA GLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNM NDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK YLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL ; _struct_ref.pdbx_align_begin 72 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NVG _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 289 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B3LRE1 _struct_ref_seq.db_align_beg 72 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 362 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 4 _struct_ref_seq.pdbx_auth_seq_align_end 292 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NVG GLY B 187 ? UNP B3LRE1 PRO 258 'ENGINEERED MUTATION' 190 1 1 4NVG GLY B 188 ? UNP B3LRE1 TRP 259 'ENGINEERED MUTATION' 191 2 1 4NVG ? B ? ? UNP B3LRE1 GLY 260 DELETION ? 3 1 4NVG ? B ? ? UNP B3LRE1 ALA 261 DELETION ? 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2N9 non-polymer . 'ethyl 4-aminoquinoline-3-carboxylate' ? 'C12 H12 N2 O2' 216.236 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MES non-polymer . '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' ? 'C6 H13 N O4 S' 195.237 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4NVG _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6 _exptl_crystal_grow.temp 283 _exptl_crystal_grow.pdbx_details ;Compound soaked into crystal grown in equal volume of 500mM MES buffer (pH 6.0) and 25% MPD, vapor diffusion, hanging drop, temperature 283K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-07-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'KOHZU DUAL DOUBLE CRYSTAL' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.11587 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_wavelength_list 1.11587 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 # _reflns.entry_id 4NVG _reflns.observed_criterion_sigma_F 1.35 _reflns.observed_criterion_sigma_I 2.3 _reflns.d_resolution_high 1.74 _reflns.d_resolution_low 33.3 _reflns.number_all 37920 _reflns.number_obs 37920 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_netI_over_sigmaI 12.5 _reflns.B_iso_Wilson_estimate 22.1 _reflns.pdbx_redundancy 4.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.74 _reflns_shell.d_res_low 1.79 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs .562 _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 4.2 _reflns_shell.number_unique_all 2758 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4NVG _refine.ls_d_res_high 1.7420 _refine.ls_d_res_low 33.3 _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.7100 _refine.ls_number_reflns_obs 37918 _refine.ls_number_reflns_all 37918 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1878 _refine.ls_R_factor_R_work 0.1859 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2246 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1935 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 25.5006 _refine.solvent_model_param_bsol 62.7300 _refine.solvent_model_param_ksol 0.4000 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -4.3315 _refine.aniso_B[2][2] 11.7578 _refine.aniso_B[3][3] -7.4263 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.4700 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.0000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.7300 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8453 _refine.B_iso_max 87.950 _refine.B_iso_min 8.770 _refine.pdbx_overall_phase_error 22.1300 _refine.occupancy_max 1.000 _refine.occupancy_min 0.100 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2328 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 81 _refine_hist.number_atoms_solvent 190 _refine_hist.number_atoms_total 2599 _refine_hist.d_res_high 1.7420 _refine_hist.d_res_low 33.3 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 2738 0.015 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3745 1.933 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 350 0.090 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 504 0.017 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 1011 17.939 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.7420 1.7853 14 100.0000 2519 . 0.2965 0.3319 . 137 . 2656 . . 'X-RAY DIFFRACTION' 1.7853 1.8336 14 100.0000 2553 . 0.2558 0.2984 . 120 . 2673 . . 'X-RAY DIFFRACTION' 1.8336 1.8876 14 100.0000 2506 . 0.2317 0.3000 . 173 . 2679 . . 'X-RAY DIFFRACTION' 1.8876 1.9485 14 100.0000 2549 . 0.2149 0.2564 . 125 . 2674 . . 'X-RAY DIFFRACTION' 1.9485 2.0181 14 100.0000 2521 . 0.2006 0.2243 . 147 . 2668 . . 'X-RAY DIFFRACTION' 2.0181 2.0989 14 100.0000 2539 . 0.1832 0.2611 . 134 . 2673 . . 'X-RAY DIFFRACTION' 2.0989 2.1944 14 100.0000 2573 . 0.1803 0.2148 . 127 . 2700 . . 'X-RAY DIFFRACTION' 2.1944 2.3101 14 100.0000 2572 . 0.1819 0.2313 . 126 . 2698 . . 'X-RAY DIFFRACTION' 2.3101 2.4548 14 100.0000 2538 . 0.1819 0.2295 . 133 . 2671 . . 'X-RAY DIFFRACTION' 2.4548 2.6442 14 100.0000 2565 . 0.1756 0.2312 . 155 . 2720 . . 'X-RAY DIFFRACTION' 2.6442 2.9102 14 99.0000 2577 . 0.1725 0.2168 . 141 . 2718 . . 'X-RAY DIFFRACTION' 2.9102 3.3309 14 99.0000 2603 . 0.1632 0.1693 . 136 . 2739 . . 'X-RAY DIFFRACTION' 3.3309 4.1953 14 100.0000 2607 . 0.1579 0.1772 . 147 . 2754 . . 'X-RAY DIFFRACTION' 4.1953 33.3 14 100.0000 2761 . 0.2031 0.2561 . 134 . 2895 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4NVG _struct.title 'Predicting protein conformational response in prospective ligand discovery' _struct.pdbx_descriptor 'Cytochrome c peroxidase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NVG _struct_keywords.text ;Model system, flexibility, dynamic, loop, side-chains, energy penalty, occupancy, Boltzmann weights, flexible docking, ligand binding, OXIDOREDUCTASE ; _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 12 ? ASP A 30 ? SER B 15 ASP B 33 1 ? 19 HELX_P HELX_P2 2 GLU A 32 ? ILE A 37 ? GLU B 35 ILE B 40 1 ? 6 HELX_P HELX_P3 3 TYR A 39 ? GLY A 52 ? TYR B 42 GLY B 55 1 ? 14 HELX_P HELX_P4 4 GLY A 66 ? ARG A 69 ? GLY B 69 ARG B 72 5 ? 4 HELX_P HELX_P5 5 PHE A 70 ? ASN A 75 ? PHE B 73 ASN B 78 1 ? 6 HELX_P HELX_P6 6 ASP A 76 ? GLY A 81 ? ASP B 79 GLY B 84 5 ? 6 HELX_P HELX_P7 7 LEU A 82 ? PHE A 96 ? LEU B 85 PHE B 99 1 ? 15 HELX_P HELX_P8 8 SER A 100 ? MET A 116 ? SER B 103 MET B 119 1 ? 17 HELX_P HELX_P9 9 PRO A 131 ? THR A 135 ? PRO B 134 THR B 138 5 ? 5 HELX_P HELX_P10 10 ASP A 147 ? ARG A 157 ? ASP B 150 ARG B 160 1 ? 11 HELX_P HELX_P11 11 ASN A 161 ? GLY A 170 ? ASN B 164 GLY B 173 1 ? 10 HELX_P HELX_P12 12 ALA A 171 ? LEU A 174 ? ALA B 174 LEU B 177 5 ? 4 HELX_P HELX_P13 13 HIS A 178 ? GLY A 183 ? HIS B 181 GLY B 186 1 ? 6 HELX_P HELX_P14 14 ASN A 195 ? GLU A 204 ? ASN B 198 GLU B 207 1 ? 10 HELX_P HELX_P15 15 LEU A 227 ? ASP A 236 ? LEU B 230 ASP B 239 1 ? 10 HELX_P HELX_P16 16 ASP A 236 ? ASN A 248 ? ASP B 239 ASN B 251 1 ? 13 HELX_P HELX_P17 17 ASP A 249 ? ASN A 267 ? ASP B 252 ASN B 270 1 ? 19 HELX_P HELX_P18 18 LEU A 284 ? GLY A 288 ? LEU B 287 GLY B 291 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A HIS 172 NE2 ? ? ? 1_555 B HEM . FE ? ? B HIS 175 B HEM 301 1_555 ? ? ? ? ? ? ? 2.086 ? metalc2 metalc ? ? B HEM . FE ? ? ? 1_555 G HOH . O ? ? B HEM 301 B HOH 538 1_555 ? ? ? ? ? ? ? 2.204 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 3 ? VAL A 4 ? HIS B 6 VAL B 7 A 2 ILE A 269 ? THR A 270 ? ILE B 272 THR B 273 B 1 TRP A 206 ? LYS A 210 ? TRP B 209 LYS B 213 B 2 GLU A 216 ? SER A 220 ? GLU B 219 SER B 223 B 3 MET A 225 ? MET A 226 ? MET B 228 MET B 229 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 3 ? N HIS B 6 O THR A 270 ? O THR B 273 B 1 2 N LYS A 207 ? N LYS B 210 O ASP A 219 ? O ASP B 222 B 2 3 N TRP A 218 ? N TRP B 221 O MET A 226 ? O MET B 229 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 21 'BINDING SITE FOR RESIDUE HEM B 301' AC2 Software ? ? ? ? 15 'BINDING SITE FOR RESIDUE 2N9 B 302' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE PO4 B 303' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE PO4 B 304' AC5 Software ? ? ? ? 12 'BINDING SITE FOR RESIDUE MES B 305' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 PRO A 41 ? PRO B 44 . ? 1_555 ? 2 AC1 21 ARG A 45 ? ARG B 48 . ? 1_555 ? 3 AC1 21 TRP A 48 ? TRP B 51 . ? 1_555 ? 4 AC1 21 PRO A 142 ? PRO B 145 . ? 1_555 ? 5 AC1 21 ASP A 143 ? ASP B 146 . ? 1_555 ? 6 AC1 21 ALA A 144 ? ALA B 147 . ? 1_555 ? 7 AC1 21 LEU A 168 ? LEU B 171 . ? 1_555 ? 8 AC1 21 ALA A 171 ? ALA B 174 . ? 1_555 ? 9 AC1 21 HIS A 172 ? HIS B 175 . ? 1_555 ? 10 AC1 21 GLY A 175 ? GLY B 178 . ? 1_555 ? 11 AC1 21 LYS A 176 ? LYS B 179 . ? 1_555 ? 12 AC1 21 THR A 177 ? THR B 180 . ? 1_555 ? 13 AC1 21 HIS A 178 ? HIS B 181 . ? 1_555 ? 14 AC1 21 ASN A 181 ? ASN B 184 . ? 1_555 ? 15 AC1 21 SER A 182 ? SER B 185 . ? 1_555 ? 16 AC1 21 LEU A 227 ? LEU B 230 . ? 1_555 ? 17 AC1 21 THR A 229 ? THR B 232 . ? 1_555 ? 18 AC1 21 HOH G . ? HOH B 420 . ? 1_555 ? 19 AC1 21 HOH G . ? HOH B 450 . ? 1_555 ? 20 AC1 21 HOH G . ? HOH B 456 . ? 1_555 ? 21 AC1 21 HOH G . ? HOH B 538 . ? 1_555 ? 22 AC2 15 HIS A 172 ? HIS B 175 . ? 1_555 ? 23 AC2 15 ALA A 173 ? ALA B 176 . ? 1_555 ? 24 AC2 15 LEU A 174 ? LEU B 177 . ? 1_555 ? 25 AC2 15 GLY A 175 ? GLY B 178 . ? 1_555 ? 26 AC2 15 GLY A 187 ? GLY B 190 . ? 1_555 ? 27 AC2 15 GLY A 188 ? GLY B 191 . ? 1_555 ? 28 AC2 15 ASN A 200 ? ASN B 203 . ? 1_555 ? 29 AC2 15 TYR A 224 ? TYR B 227 . ? 1_555 ? 30 AC2 15 MET A 225 ? MET B 228 . ? 1_555 ? 31 AC2 15 MET A 226 ? MET B 229 . ? 1_555 ? 32 AC2 15 ASP A 230 ? ASP B 233 . ? 1_555 ? 33 AC2 15 MES F . ? MES B 305 . ? 1_555 ? 34 AC2 15 HOH G . ? HOH B 468 . ? 1_555 ? 35 AC2 15 HOH G . ? HOH B 583 . ? 1_555 ? 36 AC2 15 HOH G . ? HOH B 587 . ? 1_555 ? 37 AC3 5 ASN A 161 ? ASN B 164 . ? 1_555 ? 38 AC3 5 GLN A 250 ? GLN B 253 . ? 4_455 ? 39 AC3 5 ASP A 251 ? ASP B 254 . ? 4_455 ? 40 AC3 5 HOH G . ? HOH B 410 . ? 1_555 ? 41 AC3 5 HOH G . ? HOH B 417 . ? 1_555 ? 42 AC4 4 GLU A 185 ? GLU B 188 . ? 1_555 ? 43 AC4 4 GLY A 186 ? GLY B 189 . ? 1_555 ? 44 AC4 4 ASP A 219 ? ASP B 222 . ? 1_555 ? 45 AC4 4 TYR A 224 ? TYR B 227 . ? 1_555 ? 46 AC5 12 HIS A 172 ? HIS B 175 . ? 1_555 ? 47 AC5 12 LEU A 174 ? LEU B 177 . ? 1_555 ? 48 AC5 12 THR A 177 ? THR B 180 . ? 1_555 ? 49 AC5 12 GLY A 187 ? GLY B 190 . ? 1_555 ? 50 AC5 12 GLY A 188 ? GLY B 191 . ? 1_555 ? 51 AC5 12 ASN A 200 ? ASN B 203 . ? 1_555 ? 52 AC5 12 TYR A 224 ? TYR B 227 . ? 1_555 ? 53 AC5 12 MET A 225 ? MET B 228 . ? 1_555 ? 54 AC5 12 MET A 226 ? MET B 229 . ? 1_555 ? 55 AC5 12 2N9 C . ? 2N9 B 302 . ? 1_555 ? 56 AC5 12 HOH G . ? HOH B 583 . ? 1_555 ? 57 AC5 12 HOH G . ? HOH B 587 . ? 1_555 ? # _atom_sites.entry_id 4NVG _atom_sites.fract_transf_matrix[1][1] 0.019743 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014207 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009810 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C FE N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 4 4 LEU LEU B . n A 1 2 VAL 2 5 5 VAL VAL B . n A 1 3 HIS 3 6 6 HIS HIS B . n A 1 4 VAL 4 7 7 VAL VAL B . n A 1 5 ALA 5 8 8 ALA ALA B . n A 1 6 SER 6 9 9 SER SER B . n A 1 7 VAL 7 10 10 VAL VAL B . n A 1 8 GLU 8 11 11 GLU GLU B . n A 1 9 LYS 9 12 12 LYS LYS B . n A 1 10 GLY 10 13 13 GLY GLY B . n A 1 11 ARG 11 14 14 ARG ARG B . n A 1 12 SER 12 15 15 SER SER B . n A 1 13 TYR 13 16 16 TYR TYR B . n A 1 14 GLU 14 17 17 GLU GLU B . n A 1 15 ASP 15 18 18 ASP ASP B . n A 1 16 PHE 16 19 19 PHE PHE B . n A 1 17 GLN 17 20 20 GLN GLN B . n A 1 18 LYS 18 21 21 LYS LYS B . n A 1 19 VAL 19 22 22 VAL VAL B . n A 1 20 TYR 20 23 23 TYR TYR B . n A 1 21 ASN 21 24 24 ASN ASN B . n A 1 22 ALA 22 25 25 ALA ALA B . n A 1 23 ILE 23 26 26 ILE ILE B . n A 1 24 ALA 24 27 27 ALA ALA B . n A 1 25 LEU 25 28 28 LEU LEU B . n A 1 26 LYS 26 29 29 LYS LYS B . n A 1 27 LEU 27 30 30 LEU LEU B . n A 1 28 ARG 28 31 31 ARG ARG B . n A 1 29 GLU 29 32 32 GLU GLU B . n A 1 30 ASP 30 33 33 ASP ASP B . n A 1 31 ASP 31 34 34 ASP ASP B . n A 1 32 GLU 32 35 35 GLU GLU B . n A 1 33 TYR 33 36 36 TYR TYR B . n A 1 34 ASP 34 37 37 ASP ASP B . n A 1 35 ASN 35 38 38 ASN ASN B . n A 1 36 TYR 36 39 39 TYR TYR B . n A 1 37 ILE 37 40 40 ILE ILE B . n A 1 38 GLY 38 41 41 GLY GLY B . n A 1 39 TYR 39 42 42 TYR TYR B . n A 1 40 GLY 40 43 43 GLY GLY B . n A 1 41 PRO 41 44 44 PRO PRO B . n A 1 42 VAL 42 45 45 VAL VAL B . n A 1 43 LEU 43 46 46 LEU LEU B . n A 1 44 VAL 44 47 47 VAL VAL B . n A 1 45 ARG 45 48 48 ARG ARG B . n A 1 46 LEU 46 49 49 LEU LEU B . n A 1 47 ALA 47 50 50 ALA ALA B . n A 1 48 TRP 48 51 51 TRP TRP B . n A 1 49 HIS 49 52 52 HIS HIS B . n A 1 50 ILE 50 53 53 ILE ILE B . n A 1 51 SER 51 54 54 SER SER B . n A 1 52 GLY 52 55 55 GLY GLY B . n A 1 53 THR 53 56 56 THR THR B . n A 1 54 TRP 54 57 57 TRP TRP B . n A 1 55 ASP 55 58 58 ASP ASP B . n A 1 56 LYS 56 59 59 LYS LYS B . n A 1 57 HIS 57 60 60 HIS HIS B . n A 1 58 ASP 58 61 61 ASP ASP B . n A 1 59 ASN 59 62 62 ASN ASN B . n A 1 60 THR 60 63 63 THR THR B . n A 1 61 GLY 61 64 64 GLY GLY B . n A 1 62 GLY 62 65 65 GLY GLY B . n A 1 63 SER 63 66 66 SER SER B . n A 1 64 TYR 64 67 67 TYR TYR B . n A 1 65 GLY 65 68 68 GLY GLY B . n A 1 66 GLY 66 69 69 GLY GLY B . n A 1 67 THR 67 70 70 THR THR B . n A 1 68 TYR 68 71 71 TYR TYR B . n A 1 69 ARG 69 72 72 ARG ARG B . n A 1 70 PHE 70 73 73 PHE PHE B . n A 1 71 LYS 71 74 74 LYS LYS B . n A 1 72 LYS 72 75 75 LYS LYS B . n A 1 73 GLU 73 76 76 GLU GLU B . n A 1 74 PHE 74 77 77 PHE PHE B . n A 1 75 ASN 75 78 78 ASN ASN B . n A 1 76 ASP 76 79 79 ASP ASP B . n A 1 77 PRO 77 80 80 PRO PRO B . n A 1 78 SER 78 81 81 SER SER B . n A 1 79 ASN 79 82 82 ASN ASN B . n A 1 80 ALA 80 83 83 ALA ALA B . n A 1 81 GLY 81 84 84 GLY GLY B . n A 1 82 LEU 82 85 85 LEU LEU B . n A 1 83 GLN 83 86 86 GLN GLN B . n A 1 84 ASN 84 87 87 ASN ASN B . n A 1 85 GLY 85 88 88 GLY GLY B . n A 1 86 PHE 86 89 89 PHE PHE B . n A 1 87 LYS 87 90 90 LYS LYS B . n A 1 88 PHE 88 91 91 PHE PHE B . n A 1 89 LEU 89 92 92 LEU LEU B . n A 1 90 GLU 90 93 93 GLU GLU B . n A 1 91 PRO 91 94 94 PRO PRO B . n A 1 92 ILE 92 95 95 ILE ILE B . n A 1 93 HIS 93 96 96 HIS HIS B . n A 1 94 LYS 94 97 97 LYS LYS B . n A 1 95 GLU 95 98 98 GLU GLU B . n A 1 96 PHE 96 99 99 PHE PHE B . n A 1 97 PRO 97 100 100 PRO PRO B . n A 1 98 TRP 98 101 101 TRP TRP B . n A 1 99 ILE 99 102 102 ILE ILE B . n A 1 100 SER 100 103 103 SER SER B . n A 1 101 SER 101 104 104 SER SER B . n A 1 102 GLY 102 105 105 GLY GLY B . n A 1 103 ASP 103 106 106 ASP ASP B . n A 1 104 LEU 104 107 107 LEU LEU B . n A 1 105 PHE 105 108 108 PHE PHE B . n A 1 106 SER 106 109 109 SER SER B . n A 1 107 LEU 107 110 110 LEU LEU B . n A 1 108 GLY 108 111 111 GLY GLY B . n A 1 109 GLY 109 112 112 GLY GLY B . n A 1 110 VAL 110 113 113 VAL VAL B . n A 1 111 THR 111 114 114 THR THR B . n A 1 112 ALA 112 115 115 ALA ALA B . n A 1 113 VAL 113 116 116 VAL VAL B . n A 1 114 GLN 114 117 117 GLN GLN B . n A 1 115 GLU 115 118 118 GLU GLU B . n A 1 116 MET 116 119 119 MET MET B . n A 1 117 GLN 117 120 120 GLN GLN B . n A 1 118 GLY 118 121 121 GLY GLY B . n A 1 119 PRO 119 122 122 PRO PRO B . n A 1 120 LYS 120 123 123 LYS LYS B . n A 1 121 ILE 121 124 124 ILE ILE B . n A 1 122 PRO 122 125 125 PRO PRO B . n A 1 123 TRP 123 126 126 TRP TRP B . n A 1 124 ARG 124 127 127 ARG ARG B . n A 1 125 CYS 125 128 128 CYS CYS B . n A 1 126 GLY 126 129 129 GLY GLY B . n A 1 127 ARG 127 130 130 ARG ARG B . n A 1 128 VAL 128 131 131 VAL VAL B . n A 1 129 ASP 129 132 132 ASP ASP B . n A 1 130 THR 130 133 133 THR THR B . n A 1 131 PRO 131 134 134 PRO PRO B . n A 1 132 GLU 132 135 135 GLU GLU B . n A 1 133 ASP 133 136 136 ASP ASP B . n A 1 134 THR 134 137 137 THR THR B . n A 1 135 THR 135 138 138 THR THR B . n A 1 136 PRO 136 139 139 PRO PRO B . n A 1 137 ASP 137 140 140 ASP ASP B . n A 1 138 ASN 138 141 141 ASN ASN B . n A 1 139 GLY 139 142 142 GLY GLY B . n A 1 140 ARG 140 143 143 ARG ARG B . n A 1 141 LEU 141 144 144 LEU LEU B . n A 1 142 PRO 142 145 145 PRO PRO B . n A 1 143 ASP 143 146 146 ASP ASP B . n A 1 144 ALA 144 147 147 ALA ALA B . n A 1 145 ASP 145 148 148 ASP ASP B . n A 1 146 LYS 146 149 149 LYS LYS B . n A 1 147 ASP 147 150 150 ASP ASP B . n A 1 148 ALA 148 151 151 ALA ALA B . n A 1 149 GLY 149 152 152 GLY GLY B . n A 1 150 TYR 150 153 153 TYR TYR B . n A 1 151 VAL 151 154 154 VAL VAL B . n A 1 152 ARG 152 155 155 ARG ARG B . n A 1 153 THR 153 156 156 THR THR B . n A 1 154 PHE 154 157 157 PHE PHE B . n A 1 155 PHE 155 158 158 PHE PHE B . n A 1 156 GLN 156 159 159 GLN GLN B . n A 1 157 ARG 157 160 160 ARG ARG B . n A 1 158 LEU 158 161 161 LEU LEU B . n A 1 159 ASN 159 162 162 ASN ASN B . n A 1 160 MET 160 163 163 MET MET B . n A 1 161 ASN 161 164 164 ASN ASN B . n A 1 162 ASP 162 165 165 ASP ASP B . n A 1 163 ARG 163 166 166 ARG ARG B . n A 1 164 GLU 164 167 167 GLU GLU B . n A 1 165 VAL 165 168 168 VAL VAL B . n A 1 166 VAL 166 169 169 VAL VAL B . n A 1 167 ALA 167 170 170 ALA ALA B . n A 1 168 LEU 168 171 171 LEU LEU B . n A 1 169 MET 169 172 172 MET MET B . n A 1 170 GLY 170 173 173 GLY GLY B . n A 1 171 ALA 171 174 174 ALA ALA B . n A 1 172 HIS 172 175 175 HIS HIS B . n A 1 173 ALA 173 176 176 ALA ALA B . n A 1 174 LEU 174 177 177 LEU LEU B . n A 1 175 GLY 175 178 178 GLY GLY B . n A 1 176 LYS 176 179 179 LYS LYS B . n A 1 177 THR 177 180 180 THR THR B . n A 1 178 HIS 178 181 181 HIS HIS B . n A 1 179 LEU 179 182 182 LEU LEU B . n A 1 180 LYS 180 183 183 LYS LYS B . n A 1 181 ASN 181 184 184 ASN ASN B . n A 1 182 SER 182 185 185 SER SER B . n A 1 183 GLY 183 186 186 GLY GLY B . n A 1 184 TYR 184 187 187 TYR TYR B . n A 1 185 GLU 185 188 188 GLU GLU B . n A 1 186 GLY 186 189 189 GLY GLY B . n A 1 187 GLY 187 190 190 GLY GLY B . n A 1 188 GLY 188 191 191 GLY GLY B . n A 1 189 ALA 189 192 192 ALA ALA B . n A 1 190 ASN 190 193 193 ASN ASN B . n A 1 191 ASN 191 194 194 ASN ASN B . n A 1 192 VAL 192 195 195 VAL VAL B . n A 1 193 PHE 193 196 196 PHE PHE B . n A 1 194 THR 194 197 197 THR THR B . n A 1 195 ASN 195 198 198 ASN ASN B . n A 1 196 GLU 196 199 199 GLU GLU B . n A 1 197 PHE 197 200 200 PHE PHE B . n A 1 198 TYR 198 201 201 TYR TYR B . n A 1 199 LEU 199 202 202 LEU LEU B . n A 1 200 ASN 200 203 203 ASN ASN B . n A 1 201 LEU 201 204 204 LEU LEU B . n A 1 202 LEU 202 205 205 LEU LEU B . n A 1 203 ASN 203 206 206 ASN ASN B . n A 1 204 GLU 204 207 207 GLU GLU B . n A 1 205 ASP 205 208 208 ASP ASP B . n A 1 206 TRP 206 209 209 TRP TRP B . n A 1 207 LYS 207 210 210 LYS LYS B . n A 1 208 LEU 208 211 211 LEU LEU B . n A 1 209 GLU 209 212 212 GLU GLU B . n A 1 210 LYS 210 213 213 LYS LYS B . n A 1 211 ASN 211 214 214 ASN ASN B . n A 1 212 ASP 212 215 215 ASP ASP B . n A 1 213 ALA 213 216 216 ALA ALA B . n A 1 214 ASN 214 217 217 ASN ASN B . n A 1 215 ASN 215 218 218 ASN ASN B . n A 1 216 GLU 216 219 219 GLU GLU B . n A 1 217 GLN 217 220 220 GLN GLN B . n A 1 218 TRP 218 221 221 TRP TRP B . n A 1 219 ASP 219 222 222 ASP ASP B . n A 1 220 SER 220 223 223 SER SER B . n A 1 221 LYS 221 224 224 LYS LYS B . n A 1 222 SER 222 225 225 SER SER B . n A 1 223 GLY 223 226 226 GLY GLY B . n A 1 224 TYR 224 227 227 TYR TYR B . n A 1 225 MET 225 228 228 MET MET B . n A 1 226 MET 226 229 229 MET MET B . n A 1 227 LEU 227 230 230 LEU LEU B . n A 1 228 PRO 228 231 231 PRO PRO B . n A 1 229 THR 229 232 232 THR THR B . n A 1 230 ASP 230 233 233 ASP ASP B . n A 1 231 TYR 231 234 234 TYR TYR B . n A 1 232 SER 232 235 235 SER SER B . n A 1 233 LEU 233 236 236 LEU LEU B . n A 1 234 ILE 234 237 237 ILE ILE B . n A 1 235 GLN 235 238 238 GLN GLN B . n A 1 236 ASP 236 239 239 ASP ASP B . n A 1 237 PRO 237 240 240 PRO PRO B . n A 1 238 LYS 238 241 241 LYS LYS B . n A 1 239 TYR 239 242 242 TYR TYR B . n A 1 240 LEU 240 243 243 LEU LEU B . n A 1 241 SER 241 244 244 SER SER B . n A 1 242 ILE 242 245 245 ILE ILE B . n A 1 243 VAL 243 246 246 VAL VAL B . n A 1 244 LYS 244 247 247 LYS LYS B . n A 1 245 GLU 245 248 248 GLU GLU B . n A 1 246 TYR 246 249 249 TYR TYR B . n A 1 247 ALA 247 250 250 ALA ALA B . n A 1 248 ASN 248 251 251 ASN ASN B . n A 1 249 ASP 249 252 252 ASP ASP B . n A 1 250 GLN 250 253 253 GLN GLN B . n A 1 251 ASP 251 254 254 ASP ASP B . n A 1 252 LYS 252 255 255 LYS LYS B . n A 1 253 PHE 253 256 256 PHE PHE B . n A 1 254 PHE 254 257 257 PHE PHE B . n A 1 255 LYS 255 258 258 LYS LYS B . n A 1 256 ASP 256 259 259 ASP ASP B . n A 1 257 PHE 257 260 260 PHE PHE B . n A 1 258 SER 258 261 261 SER SER B . n A 1 259 LYS 259 262 262 LYS LYS B . n A 1 260 ALA 260 263 263 ALA ALA B . n A 1 261 PHE 261 264 264 PHE PHE B . n A 1 262 GLU 262 265 265 GLU GLU B . n A 1 263 LYS 263 266 266 LYS LYS B . n A 1 264 LEU 264 267 267 LEU LEU B . n A 1 265 LEU 265 268 268 LEU LEU B . n A 1 266 GLU 266 269 269 GLU GLU B . n A 1 267 ASN 267 270 270 ASN ASN B . n A 1 268 GLY 268 271 271 GLY GLY B . n A 1 269 ILE 269 272 272 ILE ILE B . n A 1 270 THR 270 273 273 THR THR B . n A 1 271 PHE 271 274 274 PHE PHE B . n A 1 272 PRO 272 275 275 PRO PRO B . n A 1 273 LYS 273 276 276 LYS LYS B . n A 1 274 ASP 274 277 277 ASP ASP B . n A 1 275 ALA 275 278 278 ALA ALA B . n A 1 276 PRO 276 279 279 PRO PRO B . n A 1 277 SER 277 280 280 SER SER B . n A 1 278 PRO 278 281 281 PRO PRO B . n A 1 279 PHE 279 282 282 PHE PHE B . n A 1 280 ILE 280 283 283 ILE ILE B . n A 1 281 PHE 281 284 284 PHE PHE B . n A 1 282 LYS 282 285 285 LYS LYS B . n A 1 283 THR 283 286 286 THR THR B . n A 1 284 LEU 284 287 287 LEU LEU B . n A 1 285 GLU 285 288 288 GLU GLU B . n A 1 286 GLU 286 289 289 GLU GLU B . n A 1 287 GLN 287 290 290 GLN GLN B . n A 1 288 GLY 288 291 291 GLY GLY B . n A 1 289 LEU 289 292 292 LEU LEU B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 172 ? B HIS 175 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 NA ? B HEM . ? B HEM 301 ? 1_555 95.4 ? 2 NE2 ? A HIS 172 ? B HIS 175 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 NB ? B HEM . ? B HEM 301 ? 1_555 87.4 ? 3 NA ? B HEM . ? B HEM 301 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 NB ? B HEM . ? B HEM 301 ? 1_555 89.7 ? 4 NE2 ? A HIS 172 ? B HIS 175 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 NC ? B HEM . ? B HEM 301 ? 1_555 85.9 ? 5 NA ? B HEM . ? B HEM 301 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 NC ? B HEM . ? B HEM 301 ? 1_555 178.6 ? 6 NB ? B HEM . ? B HEM 301 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 NC ? B HEM . ? B HEM 301 ? 1_555 90.1 ? 7 NE2 ? A HIS 172 ? B HIS 175 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 ND ? B HEM . ? B HEM 301 ? 1_555 95.9 ? 8 NA ? B HEM . ? B HEM 301 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 ND ? B HEM . ? B HEM 301 ? 1_555 89.2 ? 9 NB ? B HEM . ? B HEM 301 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 ND ? B HEM . ? B HEM 301 ? 1_555 176.6 ? 10 NC ? B HEM . ? B HEM 301 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 ND ? B HEM . ? B HEM 301 ? 1_555 90.9 ? 11 NE2 ? A HIS 172 ? B HIS 175 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 O ? G HOH . ? B HOH 538 ? 1_555 174.3 ? 12 NA ? B HEM . ? B HEM 301 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 O ? G HOH . ? B HOH 538 ? 1_555 83.0 ? 13 NB ? B HEM . ? B HEM 301 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 O ? G HOH . ? B HOH 538 ? 1_555 87.2 ? 14 NC ? B HEM . ? B HEM 301 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 O ? G HOH . ? B HOH 538 ? 1_555 95.6 ? 15 ND ? B HEM . ? B HEM 301 ? 1_555 FE ? B HEM . ? B HEM 301 ? 1_555 O ? G HOH . ? B HOH 538 ? 1_555 89.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-18 2 'Structure model' 1 1 2015-06-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 PHENIX 1.7.2_869 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 33 ? ? -97.03 54.21 2 1 ALA B 192 ? B -149.96 35.19 3 1 ASP B 252 ? ? -153.53 87.93 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 'ethyl 4-aminoquinoline-3-carboxylate' 2N9 4 'PHOSPHATE ION' PO4 5 '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' MES 6 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM 1 301 1 HEM HEM B . C 3 2N9 1 302 1 2N9 008 B . D 4 PO4 1 303 1 PO4 PO4 B . E 4 PO4 1 304 2 PO4 PO4 B . F 5 MES 1 305 1 MES MES B . G 6 HOH 1 401 3 HOH HOH B . G 6 HOH 2 402 4 HOH HOH B . G 6 HOH 3 403 5 HOH HOH B . G 6 HOH 4 404 6 HOH HOH B . G 6 HOH 5 405 7 HOH HOH B . G 6 HOH 6 406 8 HOH HOH B . G 6 HOH 7 407 9 HOH HOH B . G 6 HOH 8 408 10 HOH HOH B . G 6 HOH 9 409 11 HOH HOH B . G 6 HOH 10 410 12 HOH HOH B . G 6 HOH 11 411 13 HOH HOH B . G 6 HOH 12 412 14 HOH HOH B . G 6 HOH 13 413 15 HOH HOH B . G 6 HOH 14 414 16 HOH HOH B . G 6 HOH 15 415 17 HOH HOH B . G 6 HOH 16 416 18 HOH HOH B . G 6 HOH 17 417 19 HOH HOH B . G 6 HOH 18 418 20 HOH HOH B . G 6 HOH 19 419 22 HOH HOH B . G 6 HOH 20 420 23 HOH HOH B . G 6 HOH 21 421 24 HOH HOH B . G 6 HOH 22 422 25 HOH HOH B . G 6 HOH 23 423 26 HOH HOH B . G 6 HOH 24 424 27 HOH HOH B . G 6 HOH 25 425 28 HOH HOH B . G 6 HOH 26 426 29 HOH HOH B . G 6 HOH 27 427 30 HOH HOH B . G 6 HOH 28 428 31 HOH HOH B . G 6 HOH 29 429 32 HOH HOH B . G 6 HOH 30 430 33 HOH HOH B . G 6 HOH 31 431 34 HOH HOH B . G 6 HOH 32 432 35 HOH HOH B . G 6 HOH 33 433 36 HOH HOH B . G 6 HOH 34 434 37 HOH HOH B . G 6 HOH 35 435 38 HOH HOH B . G 6 HOH 36 436 39 HOH HOH B . G 6 HOH 37 437 40 HOH HOH B . G 6 HOH 38 438 41 HOH HOH B . G 6 HOH 39 439 42 HOH HOH B . G 6 HOH 40 440 43 HOH HOH B . G 6 HOH 41 441 44 HOH HOH B . G 6 HOH 42 442 45 HOH HOH B . G 6 HOH 43 443 46 HOH HOH B . G 6 HOH 44 444 47 HOH HOH B . G 6 HOH 45 445 48 HOH HOH B . G 6 HOH 46 446 49 HOH HOH B . G 6 HOH 47 447 50 HOH HOH B . G 6 HOH 48 448 51 HOH HOH B . G 6 HOH 49 449 52 HOH HOH B . G 6 HOH 50 450 53 HOH HOH B . G 6 HOH 51 451 54 HOH HOH B . G 6 HOH 52 452 55 HOH HOH B . G 6 HOH 53 453 56 HOH HOH B . G 6 HOH 54 454 57 HOH HOH B . G 6 HOH 55 455 58 HOH HOH B . G 6 HOH 56 456 59 HOH HOH B . G 6 HOH 57 457 60 HOH HOH B . G 6 HOH 58 458 61 HOH HOH B . G 6 HOH 59 459 62 HOH HOH B . G 6 HOH 60 460 64 HOH HOH B . G 6 HOH 61 461 65 HOH HOH B . G 6 HOH 62 462 66 HOH HOH B . G 6 HOH 63 463 67 HOH HOH B . G 6 HOH 64 464 68 HOH HOH B . G 6 HOH 65 465 69 HOH HOH B . G 6 HOH 66 466 70 HOH HOH B . G 6 HOH 67 467 71 HOH HOH B . G 6 HOH 68 468 72 HOH HOH B . G 6 HOH 69 469 73 HOH HOH B . G 6 HOH 70 470 74 HOH HOH B . G 6 HOH 71 471 75 HOH HOH B . G 6 HOH 72 472 76 HOH HOH B . G 6 HOH 73 473 77 HOH HOH B . G 6 HOH 74 474 78 HOH HOH B . G 6 HOH 75 475 79 HOH HOH B . G 6 HOH 76 476 80 HOH HOH B . G 6 HOH 77 477 81 HOH HOH B . G 6 HOH 78 478 82 HOH HOH B . G 6 HOH 79 479 83 HOH HOH B . G 6 HOH 80 480 84 HOH HOH B . G 6 HOH 81 481 85 HOH HOH B . G 6 HOH 82 482 86 HOH HOH B . G 6 HOH 83 483 87 HOH HOH B . G 6 HOH 84 484 88 HOH HOH B . G 6 HOH 85 485 89 HOH HOH B . G 6 HOH 86 486 90 HOH HOH B . G 6 HOH 87 487 91 HOH HOH B . G 6 HOH 88 488 92 HOH HOH B . G 6 HOH 89 489 95 HOH HOH B . G 6 HOH 90 490 96 HOH HOH B . G 6 HOH 91 491 97 HOH HOH B . G 6 HOH 92 492 98 HOH HOH B . G 6 HOH 93 493 99 HOH HOH B . G 6 HOH 94 494 100 HOH HOH B . G 6 HOH 95 495 102 HOH HOH B . G 6 HOH 96 496 103 HOH HOH B . G 6 HOH 97 497 104 HOH HOH B . G 6 HOH 98 498 105 HOH HOH B . G 6 HOH 99 499 106 HOH HOH B . G 6 HOH 100 500 107 HOH HOH B . G 6 HOH 101 501 108 HOH HOH B . G 6 HOH 102 502 110 HOH HOH B . G 6 HOH 103 503 111 HOH HOH B . G 6 HOH 104 504 112 HOH HOH B . G 6 HOH 105 505 114 HOH HOH B . G 6 HOH 106 506 115 HOH HOH B . G 6 HOH 107 507 116 HOH HOH B . G 6 HOH 108 508 117 HOH HOH B . G 6 HOH 109 509 118 HOH HOH B . G 6 HOH 110 510 119 HOH HOH B . G 6 HOH 111 511 120 HOH HOH B . G 6 HOH 112 512 123 HOH HOH B . G 6 HOH 113 513 124 HOH HOH B . G 6 HOH 114 514 125 HOH HOH B . G 6 HOH 115 515 126 HOH HOH B . G 6 HOH 116 516 127 HOH HOH B . G 6 HOH 117 517 128 HOH HOH B . G 6 HOH 118 518 129 HOH HOH B . G 6 HOH 119 519 132 HOH HOH B . G 6 HOH 120 520 133 HOH HOH B . G 6 HOH 121 521 138 HOH HOH B . G 6 HOH 122 522 141 HOH HOH B . G 6 HOH 123 523 143 HOH HOH B . G 6 HOH 124 524 144 HOH HOH B . G 6 HOH 125 525 145 HOH HOH B . G 6 HOH 126 526 150 HOH HOH B . G 6 HOH 127 527 152 HOH HOH B . G 6 HOH 128 528 153 HOH HOH B . G 6 HOH 129 529 155 HOH HOH B . G 6 HOH 130 530 157 HOH HOH B . G 6 HOH 131 531 165 HOH HOH B . G 6 HOH 132 532 170 HOH HOH B . G 6 HOH 133 533 174 HOH HOH B . G 6 HOH 134 534 175 HOH HOH B . G 6 HOH 135 535 176 HOH HOH B . G 6 HOH 136 536 178 HOH HOH B . G 6 HOH 137 537 179 HOH HOH B . G 6 HOH 138 538 180 HOH HOH B . G 6 HOH 139 539 181 HOH HOH B . G 6 HOH 140 540 182 HOH HOH B . G 6 HOH 141 541 183 HOH HOH B . G 6 HOH 142 542 184 HOH HOH B . G 6 HOH 143 543 185 HOH HOH B . G 6 HOH 144 544 186 HOH HOH B . G 6 HOH 145 545 187 HOH HOH B . G 6 HOH 146 546 188 HOH HOH B . G 6 HOH 147 547 189 HOH HOH B . G 6 HOH 148 548 190 HOH HOH B . G 6 HOH 149 549 191 HOH HOH B . G 6 HOH 150 550 193 HOH HOH B . G 6 HOH 151 551 195 HOH HOH B . G 6 HOH 152 552 196 HOH HOH B . G 6 HOH 153 553 197 HOH HOH B . G 6 HOH 154 554 198 HOH HOH B . G 6 HOH 155 555 199 HOH HOH B . G 6 HOH 156 556 200 HOH HOH B . G 6 HOH 157 557 201 HOH HOH B . G 6 HOH 158 558 202 HOH HOH B . G 6 HOH 159 559 203 HOH HOH B . G 6 HOH 160 560 204 HOH HOH B . G 6 HOH 161 561 205 HOH HOH B . G 6 HOH 162 562 206 HOH HOH B . G 6 HOH 163 563 207 HOH HOH B . G 6 HOH 164 564 208 HOH HOH B . G 6 HOH 165 565 209 HOH HOH B . G 6 HOH 166 566 212 HOH HOH B . G 6 HOH 167 567 214 HOH HOH B . G 6 HOH 168 568 215 HOH HOH B . G 6 HOH 169 569 216 HOH HOH B . G 6 HOH 170 570 217 HOH HOH B . G 6 HOH 171 571 219 HOH HOH B . G 6 HOH 172 572 222 HOH HOH B . G 6 HOH 173 573 223 HOH HOH B . G 6 HOH 174 574 224 HOH HOH B . G 6 HOH 175 575 226 HOH HOH B . G 6 HOH 176 576 227 HOH HOH B . G 6 HOH 177 577 228 HOH HOH B . G 6 HOH 178 578 231 HOH HOH B . G 6 HOH 179 579 236 HOH HOH B . G 6 HOH 180 580 237 HOH HOH B . G 6 HOH 181 581 238 HOH HOH B . G 6 HOH 182 582 240 HOH HOH B . G 6 HOH 183 583 241 HOH HOH B . G 6 HOH 184 584 242 HOH HOH B . G 6 HOH 185 585 243 HOH HOH B . G 6 HOH 186 586 244 HOH HOH B . G 6 HOH 187 587 245 HOH HOH B . G 6 HOH 188 588 246 HOH HOH B . G 6 HOH 189 589 247 HOH HOH B . G 6 HOH 190 590 248 HOH HOH B . #