HEADER TRANSFERASE/TRANSFERASE INHIBITOR 05-DEC-13 4NVQ TITLE HUMAN G9A IN COMPLEX WITH INHIBITOR A-366 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE EHMT2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: EUCHROMATIC HISTONE-LYSINE N-METHYLTRANSFERASE 2, HLA-B- COMPND 5 ASSOCIATED TRANSCRIPT 8, HISTONE H3-K9 METHYLTRANSFERASE 3, H3-K9- COMPND 6 HMTASE 3, LYSINE N-METHYLTRANSFERASE 1C, PROTEIN G9A; COMPND 7 EC: 2.1.1.-, 2.1.1.43; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EHMT2, BAT8, C6ORF30, G9A, KMT1C, NG36; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS LYSINE METHYL TRANSFERASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.F.SWEIS,M.PLIUSHCHEV,P.J.BROWN,J.GUO,F.LI,D.MAAG,A.M.PETROS, AUTHOR 2 N.B.SONI,C.TSE,M.VEDADI,M.R.MICHAELIDES,G.G.CHIANG,W.N.PAPPANO REVDAT 4 28-FEB-24 4NVQ 1 REMARK SEQADV LINK REVDAT 3 22-NOV-17 4NVQ 1 REMARK REVDAT 2 16-JUL-14 4NVQ 1 JRNL REVDAT 1 15-JAN-14 4NVQ 0 JRNL AUTH R.F.SWEIS,M.PLIUSHCHEV,P.J.BROWN,J.GUO,F.LI,D.MAAG, JRNL AUTH 2 A.M.PETROS,N.B.SONI,C.TSE,M.VEDADI,M.R.MICHAELIDES, JRNL AUTH 3 G.G.CHIANG,W.N.PAPPANO JRNL TITL DISCOVERY AND DEVELOPMENT OF POTENT AND SELECTIVE INHIBITORS JRNL TITL 2 OF HISTONE METHYLTRANSFERASE G9A. JRNL REF ACS MED CHEM LETT V. 5 205 2014 JRNL REFN ISSN 1948-5875 JRNL PMID 24900801 JRNL DOI 10.1021/ML400496H REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.11.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 39743 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1980 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.08 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.29 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2952 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2814 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2813 REMARK 3 BIN R VALUE (WORKING SET) : 0.2798 REMARK 3 BIN FREE R VALUE : 0.3163 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.71 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 139 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4073 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 243 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 21.33270 REMARK 3 B22 (A**2) : -5.22310 REMARK 3 B33 (A**2) : -16.10960 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -13.36810 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.312 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.183 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.916 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4273 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5803 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1455 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 110 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 681 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4273 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 7 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 552 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5121 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.03 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.06 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.01 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NVQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083715. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 78.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS, 17.0% PEG3350, PH REMARK 280 5.75, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.12500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 909 REMARK 465 SER A 910 REMARK 465 HIS A 911 REMARK 465 MET A 912 REMARK 465 ASN A 913 REMARK 465 ARG A 914 REMARK 465 ALA A 915 REMARK 465 ASP A 1090 REMARK 465 ASN A 1091 REMARK 465 LYS A 1092 REMARK 465 ASP A 1093 REMARK 465 LYS A 1164 REMARK 465 ARG A 1188 REMARK 465 LEU A 1189 REMARK 465 ALA A 1190 REMARK 465 ARG A 1191 REMARK 465 LEU A 1192 REMARK 465 ASP A 1193 REMARK 465 GLY B 909 REMARK 465 SER B 910 REMARK 465 HIS B 911 REMARK 465 MET B 912 REMARK 465 ASN B 913 REMARK 465 ARG B 914 REMARK 465 ALA B 915 REMARK 465 ILE B 916 REMARK 465 ARG B 917 REMARK 465 GLY B 988 REMARK 465 GLN B 989 REMARK 465 LEU B 990 REMARK 465 SER B 991 REMARK 465 ILE B 992 REMARK 465 ASN B 1091 REMARK 465 LYS B 1092 REMARK 465 ASP B 1093 REMARK 465 GLY B 1094 REMARK 465 GLU B 1095 REMARK 465 ARG B 1191 REMARK 465 LEU B 1192 REMARK 465 ASP B 1193 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 918 OG1 CG2 REMARK 470 LYS A 920 CG CD CE NZ REMARK 470 ILE A 921 CG1 CG2 CD1 REMARK 470 ILE A 922 CG2 CD1 REMARK 470 ARG A 924 CD NE CZ NH1 NH2 REMARK 470 GLU A 948 CG CD OE1 OE2 REMARK 470 LYS A 951 NZ REMARK 470 VAL A 977 CG1 CG2 REMARK 470 SER A 983 OG REMARK 470 LEU A 986 CD1 CD2 REMARK 470 ILE A 992 CG1 CG2 CD1 REMARK 470 LYS A 998 CG CD CE NZ REMARK 470 LYS A1008 CG CD CE NZ REMARK 470 ILE A1009 CG1 CG2 CD1 REMARK 470 GLU A1010 CG CD OE1 OE2 REMARK 470 LEU A1013 CD1 CD2 REMARK 470 LYS A1028 CG CD CE NZ REMARK 470 LYS A1047 CE NZ REMARK 470 VAL A1079 CG1 CG2 REMARK 470 GLU A1081 CG CD OE1 OE2 REMARK 470 GLU A1095 CG CD OE1 OE2 REMARK 470 VAL A1096 CG1 CG2 REMARK 470 ARG A1145 CD NE CZ NH1 NH2 REMARK 470 TYR A1165 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A1173 CG CD OE1 OE2 REMARK 470 LYS A1174 CG CD CE NZ REMARK 470 LYS A1176 CG CD CE NZ REMARK 470 GLU A1180 CG CD OE1 OE2 REMARK 470 GLU A1185 CG CD OE1 OE2 REMARK 470 GLN A1186 CG CD OE1 NE2 REMARK 470 SER A1187 OG REMARK 470 THR B 918 OG1 CG2 REMARK 470 LYS B 920 CG CD CE NZ REMARK 470 ILE B 921 CG1 CG2 CD1 REMARK 470 ILE B 922 CG2 CD1 REMARK 470 ARG B 924 CD NE CZ NH1 NH2 REMARK 470 VAL B 977 CG1 CG2 REMARK 470 SER B 983 OG REMARK 470 ASN B 984 CG OD1 ND2 REMARK 470 LEU B 986 CD1 CD2 REMARK 470 LYS B 998 CG CD CE NZ REMARK 470 LEU B1003 CD1 CD2 REMARK 470 GLN B1004 CG CD OE1 NE2 REMARK 470 LYS B1008 CD CE NZ REMARK 470 ILE B1009 CG1 CG2 CD1 REMARK 470 GLU B1010 CG CD OE1 OE2 REMARK 470 LEU B1013 CD1 CD2 REMARK 470 ILE B1072 CG2 CD1 REMARK 470 VAL B1079 CG1 CG2 REMARK 470 GLU B1081 CG CD OE1 OE2 REMARK 470 ARG B1145 CD NE CZ NH1 NH2 REMARK 470 ARG B1157 NH2 REMARK 470 GLU B1173 CG CD OE1 OE2 REMARK 470 LYS B1174 CG CD CE NZ REMARK 470 LYS B1176 CE NZ REMARK 470 GLU B1180 CG CD OE1 OE2 REMARK 470 ILE B1182 CG1 CG2 CD1 REMARK 470 LEU B1184 CG CD1 CD2 REMARK 470 GLU B1185 CG CD OE1 OE2 REMARK 470 GLN B1186 CG CD OE1 NE2 REMARK 470 SER B1187 OG REMARK 470 ARG B1188 CG CD NE CZ NH1 NH2 REMARK 470 LEU B1189 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TRP A 1159 O HOH A 1399 2.04 REMARK 500 SG CYS A 980 O HOH A 1425 2.11 REMARK 500 N3 2OD A 1201 O HOH A 1433 2.16 REMARK 500 N SER A 1163 O HOH A 1399 2.18 REMARK 500 N LYS A 1162 O HOH A 1399 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 949 36.02 -98.13 REMARK 500 ASP A 978 -146.36 -95.76 REMARK 500 ILE A 992 -46.06 89.25 REMARK 500 ASN A1029 48.87 -108.75 REMARK 500 ARG A1030 36.85 -145.88 REMARK 500 ILE A1064 -65.24 -100.39 REMARK 500 GLU A1095 -143.84 78.69 REMARK 500 ASN A1106 -169.74 -120.20 REMARK 500 ASP A1116 79.60 -113.96 REMARK 500 MET A1126 -95.88 -129.76 REMARK 500 GLU B 948 25.59 -141.15 REMARK 500 ASP B 949 36.05 -97.92 REMARK 500 ASN B 963 70.82 38.01 REMARK 500 ASP B 978 -150.10 -102.30 REMARK 500 ARG B1030 36.88 -145.62 REMARK 500 ILE B1064 -65.38 -101.40 REMARK 500 ASP B1116 79.95 -115.21 REMARK 500 MET B1126 -96.12 -128.39 REMARK 500 ALA B1179 -48.64 125.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 974 SG REMARK 620 2 CYS A 987 SG 109.3 REMARK 620 3 CYS A1017 SG 108.1 119.0 REMARK 620 4 CYS A1021 SG 102.5 98.1 118.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1204 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 974 SG REMARK 620 2 CYS A 976 SG 102.8 REMARK 620 3 CYS A 980 SG 111.3 99.4 REMARK 620 4 CYS A 985 SG 123.3 105.9 110.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1205 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 980 SG REMARK 620 2 CYS A1017 SG 101.8 REMARK 620 3 CYS A1023 SG 107.1 105.1 REMARK 620 4 CYS A1027 SG 120.3 114.1 107.4 REMARK 620 5 HOH A1425 O 49.0 142.2 106.4 75.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1206 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1115 SG REMARK 620 2 CYS A1168 SG 123.7 REMARK 620 3 CYS A1170 SG 114.9 103.4 REMARK 620 4 CYS A1175 SG 105.7 104.4 102.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1204 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 974 SG REMARK 620 2 CYS B 976 SG 103.0 REMARK 620 3 CYS B 980 SG 109.5 104.6 REMARK 620 4 CYS B 985 SG 113.4 108.5 116.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1205 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 974 SG REMARK 620 2 CYS B 987 SG 106.3 REMARK 620 3 CYS B1017 SG 107.5 111.0 REMARK 620 4 CYS B1021 SG 109.4 99.9 121.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 980 SG REMARK 620 2 CYS B1017 SG 107.9 REMARK 620 3 CYS B1023 SG 110.1 110.0 REMARK 620 4 CYS B1027 SG 113.4 106.7 108.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1206 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1115 SG REMARK 620 2 CYS B1168 SG 116.3 REMARK 620 3 CYS B1170 SG 113.1 111.6 REMARK 620 4 CYS B1175 SG 100.0 106.1 108.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2OD A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH B 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2OD B 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1206 DBREF 4NVQ A 913 1193 UNP Q96KQ7 EHMT2_HUMAN 913 1193 DBREF 4NVQ B 913 1193 UNP Q96KQ7 EHMT2_HUMAN 913 1193 SEQADV 4NVQ GLY A 909 UNP Q96KQ7 EXPRESSION TAG SEQADV 4NVQ SER A 910 UNP Q96KQ7 EXPRESSION TAG SEQADV 4NVQ HIS A 911 UNP Q96KQ7 EXPRESSION TAG SEQADV 4NVQ MET A 912 UNP Q96KQ7 EXPRESSION TAG SEQADV 4NVQ GLY B 909 UNP Q96KQ7 EXPRESSION TAG SEQADV 4NVQ SER B 910 UNP Q96KQ7 EXPRESSION TAG SEQADV 4NVQ HIS B 911 UNP Q96KQ7 EXPRESSION TAG SEQADV 4NVQ MET B 912 UNP Q96KQ7 EXPRESSION TAG SEQRES 1 A 285 GLY SER HIS MET ASN ARG ALA ILE ARG THR GLU LYS ILE SEQRES 2 A 285 ILE CYS ARG ASP VAL ALA ARG GLY TYR GLU ASN VAL PRO SEQRES 3 A 285 ILE PRO CYS VAL ASN GLY VAL ASP GLY GLU PRO CYS PRO SEQRES 4 A 285 GLU ASP TYR LYS TYR ILE SER GLU ASN CYS GLU THR SER SEQRES 5 A 285 THR MET ASN ILE ASP ARG ASN ILE THR HIS LEU GLN HIS SEQRES 6 A 285 CYS THR CYS VAL ASP ASP CYS SER SER SER ASN CYS LEU SEQRES 7 A 285 CYS GLY GLN LEU SER ILE ARG CYS TRP TYR ASP LYS ASP SEQRES 8 A 285 GLY ARG LEU LEU GLN GLU PHE ASN LYS ILE GLU PRO PRO SEQRES 9 A 285 LEU ILE PHE GLU CYS ASN GLN ALA CYS SER CYS TRP ARG SEQRES 10 A 285 ASN CYS LYS ASN ARG VAL VAL GLN SER GLY ILE LYS VAL SEQRES 11 A 285 ARG LEU GLN LEU TYR ARG THR ALA LYS MET GLY TRP GLY SEQRES 12 A 285 VAL ARG ALA LEU GLN THR ILE PRO GLN GLY THR PHE ILE SEQRES 13 A 285 CYS GLU TYR VAL GLY GLU LEU ILE SER ASP ALA GLU ALA SEQRES 14 A 285 ASP VAL ARG GLU ASP ASP SER TYR LEU PHE ASP LEU ASP SEQRES 15 A 285 ASN LYS ASP GLY GLU VAL TYR CYS ILE ASP ALA ARG TYR SEQRES 16 A 285 TYR GLY ASN ILE SER ARG PHE ILE ASN HIS LEU CYS ASP SEQRES 17 A 285 PRO ASN ILE ILE PRO VAL ARG VAL PHE MET LEU HIS GLN SEQRES 18 A 285 ASP LEU ARG PHE PRO ARG ILE ALA PHE PHE SER SER ARG SEQRES 19 A 285 ASP ILE ARG THR GLY GLU GLU LEU GLY PHE ASP TYR GLY SEQRES 20 A 285 ASP ARG PHE TRP ASP ILE LYS SER LYS TYR PHE THR CYS SEQRES 21 A 285 GLN CYS GLY SER GLU LYS CYS LYS HIS SER ALA GLU ALA SEQRES 22 A 285 ILE ALA LEU GLU GLN SER ARG LEU ALA ARG LEU ASP SEQRES 1 B 285 GLY SER HIS MET ASN ARG ALA ILE ARG THR GLU LYS ILE SEQRES 2 B 285 ILE CYS ARG ASP VAL ALA ARG GLY TYR GLU ASN VAL PRO SEQRES 3 B 285 ILE PRO CYS VAL ASN GLY VAL ASP GLY GLU PRO CYS PRO SEQRES 4 B 285 GLU ASP TYR LYS TYR ILE SER GLU ASN CYS GLU THR SER SEQRES 5 B 285 THR MET ASN ILE ASP ARG ASN ILE THR HIS LEU GLN HIS SEQRES 6 B 285 CYS THR CYS VAL ASP ASP CYS SER SER SER ASN CYS LEU SEQRES 7 B 285 CYS GLY GLN LEU SER ILE ARG CYS TRP TYR ASP LYS ASP SEQRES 8 B 285 GLY ARG LEU LEU GLN GLU PHE ASN LYS ILE GLU PRO PRO SEQRES 9 B 285 LEU ILE PHE GLU CYS ASN GLN ALA CYS SER CYS TRP ARG SEQRES 10 B 285 ASN CYS LYS ASN ARG VAL VAL GLN SER GLY ILE LYS VAL SEQRES 11 B 285 ARG LEU GLN LEU TYR ARG THR ALA LYS MET GLY TRP GLY SEQRES 12 B 285 VAL ARG ALA LEU GLN THR ILE PRO GLN GLY THR PHE ILE SEQRES 13 B 285 CYS GLU TYR VAL GLY GLU LEU ILE SER ASP ALA GLU ALA SEQRES 14 B 285 ASP VAL ARG GLU ASP ASP SER TYR LEU PHE ASP LEU ASP SEQRES 15 B 285 ASN LYS ASP GLY GLU VAL TYR CYS ILE ASP ALA ARG TYR SEQRES 16 B 285 TYR GLY ASN ILE SER ARG PHE ILE ASN HIS LEU CYS ASP SEQRES 17 B 285 PRO ASN ILE ILE PRO VAL ARG VAL PHE MET LEU HIS GLN SEQRES 18 B 285 ASP LEU ARG PHE PRO ARG ILE ALA PHE PHE SER SER ARG SEQRES 19 B 285 ASP ILE ARG THR GLY GLU GLU LEU GLY PHE ASP TYR GLY SEQRES 20 B 285 ASP ARG PHE TRP ASP ILE LYS SER LYS TYR PHE THR CYS SEQRES 21 B 285 GLN CYS GLY SER GLU LYS CYS LYS HIS SER ALA GLU ALA SEQRES 22 B 285 ILE ALA LEU GLU GLN SER ARG LEU ALA ARG LEU ASP HET 2OD A1201 24 HET SAH A1202 26 HET ZN A1203 1 HET ZN A1204 1 HET ZN A1205 1 HET ZN A1206 1 HET SAH B1201 26 HET 2OD B1202 24 HET ZN B1203 1 HET ZN B1204 1 HET ZN B1205 1 HET ZN B1206 1 HETNAM 2OD 5'-METHOXY-6'-[3-(PYRROLIDIN-1-YL) HETNAM 2 2OD PROPOXY]SPIRO[CYCLOBUTANE-1,3'-INDOL]-2'-AMINE HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM ZN ZINC ION FORMUL 3 2OD 2(C19 H27 N3 O2) FORMUL 4 SAH 2(C14 H20 N6 O5 S) FORMUL 5 ZN 8(ZN 2+) FORMUL 15 HOH *243(H2 O) HELIX 1 1 ASN A 967 LEU A 971 5 5 HELIX 2 2 CYS A 985 SER A 991 1 7 HELIX 3 3 VAL A 1031 GLY A 1035 5 5 HELIX 4 4 ASP A 1074 VAL A 1079 1 6 HELIX 5 5 ILE A 1107 ILE A 1111 5 5 HELIX 6 6 GLY A 1155 SER A 1163 1 9 HELIX 7 7 SER A 1178 SER A 1187 1 10 HELIX 8 8 ASN B 967 LEU B 971 5 5 HELIX 9 9 VAL B 1031 GLY B 1035 5 5 HELIX 10 10 ASP B 1074 ARG B 1080 1 7 HELIX 11 11 ILE B 1107 ILE B 1111 5 5 HELIX 12 12 GLY B 1155 SER B 1163 1 9 HELIX 13 13 ALA B 1179 ALA B 1190 1 12 SHEET 1 A 4 LYS A 920 CYS A 923 0 SHEET 2 A 4 CYS A 937 ASN A 939 -1 O CYS A 937 N CYS A 923 SHEET 3 A 4 LEU A1040 ARG A1044 1 O LEU A1042 N VAL A 938 SHEET 4 A 4 TRP A1050 ALA A1054 -1 O GLY A1051 N TYR A1043 SHEET 1 B 4 LYS A 951 TYR A 952 0 SHEET 2 B 4 TYR A1097 GLY A1105 1 O TYR A1103 N LYS A 951 SHEET 3 B 4 GLY A1069 SER A1073 -1 N ILE A1072 O CYS A1098 SHEET 4 B 4 CYS A 957 GLU A 958 1 N CYS A 957 O LEU A1071 SHEET 1 C 3 LYS A 951 TYR A 952 0 SHEET 2 C 3 TYR A1097 GLY A1105 1 O TYR A1103 N LYS A 951 SHEET 3 C 3 LEU A1086 ASP A1088 -1 N PHE A1087 O ILE A1099 SHEET 1 D 4 ILE A1014 PHE A1015 0 SHEET 2 D 4 ILE A1119 PHE A1125 1 O PHE A1125 N ILE A1014 SHEET 3 D 4 ARG A1135 SER A1140 -1 O ALA A1137 N VAL A1122 SHEET 4 D 4 PHE A1063 TYR A1067 -1 N ILE A1064 O PHE A1138 SHEET 1 E 2 ASN A1112 HIS A1113 0 SHEET 2 E 2 GLY A1151 PHE A1152 1 O PHE A1152 N ASN A1112 SHEET 1 F 4 LYS B 920 CYS B 923 0 SHEET 2 F 4 CYS B 937 ASN B 939 -1 O CYS B 937 N CYS B 923 SHEET 3 F 4 LEU B1040 ARG B1044 1 O LEU B1042 N VAL B 938 SHEET 4 F 4 TRP B1050 ALA B1054 -1 O GLY B1051 N TYR B1043 SHEET 1 G 4 LYS B 951 TYR B 952 0 SHEET 2 G 4 TYR B1097 GLY B1105 1 O TYR B1103 N LYS B 951 SHEET 3 G 4 GLY B1069 SER B1073 -1 N ILE B1072 O CYS B1098 SHEET 4 G 4 CYS B 957 GLU B 958 1 N CYS B 957 O LEU B1071 SHEET 1 H 3 LYS B 951 TYR B 952 0 SHEET 2 H 3 TYR B1097 GLY B1105 1 O TYR B1103 N LYS B 951 SHEET 3 H 3 LEU B1086 ASP B1088 -1 N PHE B1087 O ILE B1099 SHEET 1 I 4 ILE B1014 PHE B1015 0 SHEET 2 I 4 ILE B1119 PHE B1125 1 O ARG B1123 N ILE B1014 SHEET 3 I 4 ARG B1135 SER B1140 -1 O ALA B1137 N VAL B1122 SHEET 4 I 4 PHE B1063 TYR B1067 -1 N ILE B1064 O PHE B1138 SHEET 1 J 2 ASN B1112 HIS B1113 0 SHEET 2 J 2 GLY B1151 PHE B1152 1 O PHE B1152 N ASN B1112 LINK SG CYS A 974 ZN ZN A1203 1555 1555 2.56 LINK SG CYS A 974 ZN ZN A1204 1555 1555 2.17 LINK SG CYS A 976 ZN ZN A1204 1555 1555 2.56 LINK SG CYS A 980 ZN ZN A1204 1555 1555 2.21 LINK SG CYS A 980 ZN ZN A1205 1555 1555 2.57 LINK SG CYS A 985 ZN ZN A1204 1555 1555 2.34 LINK SG CYS A 987 ZN ZN A1203 1555 1555 2.22 LINK SG CYS A1017 ZN ZN A1203 1555 1555 2.17 LINK SG CYS A1017 ZN ZN A1205 1555 1555 2.26 LINK SG CYS A1021 ZN ZN A1203 1555 1555 2.28 LINK SG CYS A1023 ZN ZN A1205 1555 1555 2.35 LINK SG CYS A1027 ZN ZN A1205 1555 1555 2.14 LINK SG CYS A1115 ZN ZN A1206 1555 1555 2.17 LINK SG CYS A1168 ZN ZN A1206 1555 1555 2.21 LINK SG CYS A1170 ZN ZN A1206 1555 1555 2.32 LINK SG CYS A1175 ZN ZN A1206 1555 1555 2.47 LINK ZN ZN A1205 O HOH A1425 1555 1555 2.51 LINK SG CYS B 974 ZN ZN B1204 1555 1555 2.27 LINK SG CYS B 974 ZN ZN B1205 1555 1555 2.47 LINK SG CYS B 976 ZN ZN B1204 1555 1555 2.50 LINK SG CYS B 980 ZN ZN B1203 1555 1555 2.42 LINK SG CYS B 980 ZN ZN B1204 1555 1555 2.31 LINK SG CYS B 985 ZN ZN B1204 1555 1555 2.32 LINK SG CYS B 987 ZN ZN B1205 1555 1555 2.25 LINK SG CYS B1017 ZN ZN B1203 1555 1555 2.29 LINK SG CYS B1017 ZN ZN B1205 1555 1555 2.28 LINK SG CYS B1021 ZN ZN B1205 1555 1555 2.17 LINK SG CYS B1023 ZN ZN B1203 1555 1555 2.23 LINK SG CYS B1027 ZN ZN B1203 1555 1555 2.33 LINK SG CYS B1115 ZN ZN B1206 1555 1555 2.44 LINK SG CYS B1168 ZN ZN B1206 1555 1555 2.16 LINK SG CYS B1170 ZN ZN B1206 1555 1555 2.16 LINK SG CYS B1175 ZN ZN B1206 1555 1555 2.42 SITE 1 AC1 14 TYR A1067 ASP A1074 ALA A1077 ASP A1078 SITE 2 AC1 14 ASP A1083 SER A1084 LEU A1086 ASP A1088 SITE 3 AC1 14 PHE A1152 TYR A1154 ARG A1157 PHE A1158 SITE 4 AC1 14 HOH A1356 HOH A1433 SITE 1 AC2 15 MET A1048 GLY A1049 TRP A1050 SER A1084 SITE 2 AC2 15 TYR A1085 ARG A1109 PHE A1110 ASN A1112 SITE 3 AC2 15 HIS A1113 TYR A1154 PHE A1158 PHE A1166 SITE 4 AC2 15 THR A1167 CYS A1168 GLN A1169 SITE 1 AC3 5 CYS A 974 CYS A 987 CYS A1017 CYS A1021 SITE 2 AC3 5 ZN A1204 SITE 1 AC4 5 CYS A 974 CYS A 976 CYS A 980 CYS A 985 SITE 2 AC4 5 ZN A1203 SITE 1 AC5 5 CYS A 980 CYS A1017 CYS A1023 CYS A1027 SITE 2 AC5 5 HOH A1425 SITE 1 AC6 4 CYS A1115 CYS A1168 CYS A1170 CYS A1175 SITE 1 AC7 15 MET B1048 TRP B1050 SER B1084 TYR B1085 SITE 2 AC7 15 ARG B1109 PHE B1110 ASN B1112 HIS B1113 SITE 3 AC7 15 TYR B1154 PHE B1158 PHE B1166 THR B1167 SITE 4 AC7 15 CYS B1168 GLN B1169 HOH B1395 SITE 1 AC8 14 TYR B1067 ASP B1074 ALA B1077 ASP B1078 SITE 2 AC8 14 ASP B1083 SER B1084 LEU B1086 ASP B1088 SITE 3 AC8 14 PHE B1152 TYR B1154 ARG B1157 PHE B1158 SITE 4 AC8 14 ILE B1161 HOH B1359 SITE 1 AC9 4 CYS B 980 CYS B1017 CYS B1023 CYS B1027 SITE 1 BC1 4 CYS B 974 CYS B 976 CYS B 980 CYS B 985 SITE 1 BC2 4 CYS B 974 CYS B 987 CYS B1017 CYS B1021 SITE 1 BC3 4 CYS B1115 CYS B1168 CYS B1170 CYS B1175 CRYST1 56.140 78.250 71.440 90.00 92.61 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017813 0.000000 0.000812 0.00000 SCALE2 0.000000 0.012780 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014012 0.00000