data_4NY9 # _entry.id 4NY9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NY9 pdb_00004ny9 10.2210/pdb4ny9/pdb RCSB RCSB083806 ? ? WWPDB D_1000083806 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-08-27 2 'Structure model' 1 1 2014-12-10 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4NY9 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-12-10 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Khan, J.A.' 1 'Camac, D.M.' 2 # _citation.id primary _citation.title 'Discovery of the CCR1 antagonist, BMS-817399, for the treatment of rheumatoid arthritis.' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 57 _citation.page_first 7550 _citation.page_last 7564 _citation.year 2014 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25101488 _citation.pdbx_database_id_DOI 10.1021/jm5003167 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Santella, J.B.' 1 ? primary 'Gardner, D.S.' 2 ? primary 'Duncia, J.V.' 3 ? primary 'Wu, H.' 4 ? primary 'Dhar, M.' 5 ? primary 'Cavallaro, C.' 6 ? primary 'Tebben, A.J.' 7 ? primary 'Carter, P.H.' 8 ? primary 'Barrish, J.C.' 9 ? primary 'Yarde, M.' 10 ? primary 'Briceno, S.W.' 11 ? primary 'Cvijic, M.E.' 12 ? primary 'Grafstrom, R.R.' 13 ? primary 'Liu, R.' 14 ? primary 'Patel, S.R.' 15 ? primary 'Watson, A.J.' 16 ? primary 'Yang, G.' 17 ? primary 'Rose, A.V.' 18 ? primary 'Vickery, R.D.' 19 ? primary 'Caceres-Cortes, J.' 20 ? primary 'Caporuscio, C.' 21 ? primary 'Camac, D.M.' 22 ? primary 'Khan, J.A.' 23 ? primary 'An, Y.' 24 ? primary 'Foster, W.R.' 25 ? primary 'Davies, P.' 26 ? primary 'Hynes, J.' 27 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nuclear receptor subfamily 1 group I member 2' 33447.750 1 ? ? 'unp residues 142-431' ? 2 non-polymer syn 'N-{(2R)-1-[(4S)-4-(4-chlorophenyl)-4-hydroxy-3,3-dimethylpiperidin-1-yl]-3-methyl-1-oxobutan-2-yl}-3-hydroxy-3-methylbutanamide' 438.988 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 15 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Orphan nuclear receptor PAR1, Orphan nuclear receptor PXR, Pregnane X receptor, Steroid and xenobiotic receptor, SXR' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GLTEEQRMMIRELMDAQMKTFDTTFSHFKNFRLPGVLSSGCELPESLQAPSREEAAKWSQVRKDLCSLKVSLQLRGEDGS VWNYKPPADSGGKEIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGTWEC GRLSYCLEDTAGGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNR PQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFGI ; _entity_poly.pdbx_seq_one_letter_code_can ;GLTEEQRMMIRELMDAQMKTFDTTFSHFKNFRLPGVLSSGCELPESLQAPSREEAAKWSQVRKDLCSLKVSLQLRGEDGS VWNYKPPADSGGKEIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGTWEC GRLSYCLEDTAGGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNR PQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFGI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N-{(2R)-1-[(4S)-4-(4-chlorophenyl)-4-hydroxy-3,3-dimethylpiperidin-1-yl]-3-methyl-1-oxobutan-2-yl}-3-hydroxy-3-methylbutanamide' 2Q4 3 GLYCEROL GOL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 THR n 1 4 GLU n 1 5 GLU n 1 6 GLN n 1 7 ARG n 1 8 MET n 1 9 MET n 1 10 ILE n 1 11 ARG n 1 12 GLU n 1 13 LEU n 1 14 MET n 1 15 ASP n 1 16 ALA n 1 17 GLN n 1 18 MET n 1 19 LYS n 1 20 THR n 1 21 PHE n 1 22 ASP n 1 23 THR n 1 24 THR n 1 25 PHE n 1 26 SER n 1 27 HIS n 1 28 PHE n 1 29 LYS n 1 30 ASN n 1 31 PHE n 1 32 ARG n 1 33 LEU n 1 34 PRO n 1 35 GLY n 1 36 VAL n 1 37 LEU n 1 38 SER n 1 39 SER n 1 40 GLY n 1 41 CYS n 1 42 GLU n 1 43 LEU n 1 44 PRO n 1 45 GLU n 1 46 SER n 1 47 LEU n 1 48 GLN n 1 49 ALA n 1 50 PRO n 1 51 SER n 1 52 ARG n 1 53 GLU n 1 54 GLU n 1 55 ALA n 1 56 ALA n 1 57 LYS n 1 58 TRP n 1 59 SER n 1 60 GLN n 1 61 VAL n 1 62 ARG n 1 63 LYS n 1 64 ASP n 1 65 LEU n 1 66 CYS n 1 67 SER n 1 68 LEU n 1 69 LYS n 1 70 VAL n 1 71 SER n 1 72 LEU n 1 73 GLN n 1 74 LEU n 1 75 ARG n 1 76 GLY n 1 77 GLU n 1 78 ASP n 1 79 GLY n 1 80 SER n 1 81 VAL n 1 82 TRP n 1 83 ASN n 1 84 TYR n 1 85 LYS n 1 86 PRO n 1 87 PRO n 1 88 ALA n 1 89 ASP n 1 90 SER n 1 91 GLY n 1 92 GLY n 1 93 LYS n 1 94 GLU n 1 95 ILE n 1 96 PHE n 1 97 SER n 1 98 LEU n 1 99 LEU n 1 100 PRO n 1 101 HIS n 1 102 MET n 1 103 ALA n 1 104 ASP n 1 105 MET n 1 106 SER n 1 107 THR n 1 108 TYR n 1 109 MET n 1 110 PHE n 1 111 LYS n 1 112 GLY n 1 113 ILE n 1 114 ILE n 1 115 SER n 1 116 PHE n 1 117 ALA n 1 118 LYS n 1 119 VAL n 1 120 ILE n 1 121 SER n 1 122 TYR n 1 123 PHE n 1 124 ARG n 1 125 ASP n 1 126 LEU n 1 127 PRO n 1 128 ILE n 1 129 GLU n 1 130 ASP n 1 131 GLN n 1 132 ILE n 1 133 SER n 1 134 LEU n 1 135 LEU n 1 136 LYS n 1 137 GLY n 1 138 ALA n 1 139 ALA n 1 140 PHE n 1 141 GLU n 1 142 LEU n 1 143 CYS n 1 144 GLN n 1 145 LEU n 1 146 ARG n 1 147 PHE n 1 148 ASN n 1 149 THR n 1 150 VAL n 1 151 PHE n 1 152 ASN n 1 153 ALA n 1 154 GLU n 1 155 THR n 1 156 GLY n 1 157 THR n 1 158 TRP n 1 159 GLU n 1 160 CYS n 1 161 GLY n 1 162 ARG n 1 163 LEU n 1 164 SER n 1 165 TYR n 1 166 CYS n 1 167 LEU n 1 168 GLU n 1 169 ASP n 1 170 THR n 1 171 ALA n 1 172 GLY n 1 173 GLY n 1 174 PHE n 1 175 GLN n 1 176 GLN n 1 177 LEU n 1 178 LEU n 1 179 LEU n 1 180 GLU n 1 181 PRO n 1 182 MET n 1 183 LEU n 1 184 LYS n 1 185 PHE n 1 186 HIS n 1 187 TYR n 1 188 MET n 1 189 LEU n 1 190 LYS n 1 191 LYS n 1 192 LEU n 1 193 GLN n 1 194 LEU n 1 195 HIS n 1 196 GLU n 1 197 GLU n 1 198 GLU n 1 199 TYR n 1 200 VAL n 1 201 LEU n 1 202 MET n 1 203 GLN n 1 204 ALA n 1 205 ILE n 1 206 SER n 1 207 LEU n 1 208 PHE n 1 209 SER n 1 210 PRO n 1 211 ASP n 1 212 ARG n 1 213 PRO n 1 214 GLY n 1 215 VAL n 1 216 LEU n 1 217 GLN n 1 218 HIS n 1 219 ARG n 1 220 VAL n 1 221 VAL n 1 222 ASP n 1 223 GLN n 1 224 LEU n 1 225 GLN n 1 226 GLU n 1 227 GLN n 1 228 PHE n 1 229 ALA n 1 230 ILE n 1 231 THR n 1 232 LEU n 1 233 LYS n 1 234 SER n 1 235 TYR n 1 236 ILE n 1 237 GLU n 1 238 CYS n 1 239 ASN n 1 240 ARG n 1 241 PRO n 1 242 GLN n 1 243 PRO n 1 244 ALA n 1 245 HIS n 1 246 ARG n 1 247 PHE n 1 248 LEU n 1 249 PHE n 1 250 LEU n 1 251 LYS n 1 252 ILE n 1 253 MET n 1 254 ALA n 1 255 MET n 1 256 LEU n 1 257 THR n 1 258 GLU n 1 259 LEU n 1 260 ARG n 1 261 SER n 1 262 ILE n 1 263 ASN n 1 264 ALA n 1 265 GLN n 1 266 HIS n 1 267 THR n 1 268 GLN n 1 269 ARG n 1 270 LEU n 1 271 LEU n 1 272 ARG n 1 273 ILE n 1 274 GLN n 1 275 ASP n 1 276 ILE n 1 277 HIS n 1 278 PRO n 1 279 PHE n 1 280 ALA n 1 281 THR n 1 282 PRO n 1 283 LEU n 1 284 MET n 1 285 GLN n 1 286 GLU n 1 287 LEU n 1 288 PHE n 1 289 GLY n 1 290 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NR1I2, PXR' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pCO7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2Q4 non-polymer . 'N-{(2R)-1-[(4S)-4-(4-chlorophenyl)-4-hydroxy-3,3-dimethylpiperidin-1-yl]-3-methyl-1-oxobutan-2-yl}-3-hydroxy-3-methylbutanamide' ? 'C23 H35 Cl N2 O4' 438.988 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 142 142 GLY GLY A . n A 1 2 LEU 2 143 143 LEU LEU A . n A 1 3 THR 3 144 144 THR THR A . n A 1 4 GLU 4 145 145 GLU GLU A . n A 1 5 GLU 5 146 146 GLU GLU A . n A 1 6 GLN 6 147 147 GLN GLN A . n A 1 7 ARG 7 148 148 ARG ARG A . n A 1 8 MET 8 149 149 MET MET A . n A 1 9 MET 9 150 150 MET MET A . n A 1 10 ILE 10 151 151 ILE ILE A . n A 1 11 ARG 11 152 152 ARG ARG A . n A 1 12 GLU 12 153 153 GLU GLU A . n A 1 13 LEU 13 154 154 LEU LEU A . n A 1 14 MET 14 155 155 MET MET A . n A 1 15 ASP 15 156 156 ASP ASP A . n A 1 16 ALA 16 157 157 ALA ALA A . n A 1 17 GLN 17 158 158 GLN GLN A . n A 1 18 MET 18 159 159 MET MET A . n A 1 19 LYS 19 160 160 LYS LYS A . n A 1 20 THR 20 161 161 THR THR A . n A 1 21 PHE 21 162 162 PHE PHE A . n A 1 22 ASP 22 163 163 ASP ASP A . n A 1 23 THR 23 164 164 THR THR A . n A 1 24 THR 24 165 165 THR THR A . n A 1 25 PHE 25 166 166 PHE PHE A . n A 1 26 SER 26 167 167 SER SER A . n A 1 27 HIS 27 168 168 HIS HIS A . n A 1 28 PHE 28 169 169 PHE PHE A . n A 1 29 LYS 29 170 170 LYS LYS A . n A 1 30 ASN 30 171 171 ASN ASN A . n A 1 31 PHE 31 172 172 PHE PHE A . n A 1 32 ARG 32 173 173 ARG ARG A . n A 1 33 LEU 33 174 174 LEU LEU A . n A 1 34 PRO 34 175 175 PRO PRO A . n A 1 35 GLY 35 176 176 GLY GLY A . n A 1 36 VAL 36 177 ? ? ? A . n A 1 37 LEU 37 178 ? ? ? A . n A 1 38 SER 38 179 ? ? ? A . n A 1 39 SER 39 180 ? ? ? A . n A 1 40 GLY 40 181 ? ? ? A . n A 1 41 CYS 41 182 ? ? ? A . n A 1 42 GLU 42 183 ? ? ? A . n A 1 43 LEU 43 184 ? ? ? A . n A 1 44 PRO 44 185 ? ? ? A . n A 1 45 GLU 45 186 ? ? ? A . n A 1 46 SER 46 187 ? ? ? A . n A 1 47 LEU 47 188 ? ? ? A . n A 1 48 GLN 48 189 ? ? ? A . n A 1 49 ALA 49 190 ? ? ? A . n A 1 50 PRO 50 191 ? ? ? A . n A 1 51 SER 51 192 ? ? ? A . n A 1 52 ARG 52 193 ? ? ? A . n A 1 53 GLU 53 194 ? ? ? A . n A 1 54 GLU 54 195 ? ? ? A . n A 1 55 ALA 55 196 ? ? ? A . n A 1 56 ALA 56 197 ? ? ? A . n A 1 57 LYS 57 198 ? ? ? A . n A 1 58 TRP 58 199 ? ? ? A . n A 1 59 SER 59 200 ? ? ? A . n A 1 60 GLN 60 201 201 GLN GLN A . n A 1 61 VAL 61 202 202 VAL VAL A . n A 1 62 ARG 62 203 203 ARG ARG A . n A 1 63 LYS 63 204 204 LYS LYS A . n A 1 64 ASP 64 205 205 ASP ASP A . n A 1 65 LEU 65 206 206 LEU LEU A . n A 1 66 CYS 66 207 207 CYS CYS A . n A 1 67 SER 67 208 208 SER SER A . n A 1 68 LEU 68 209 209 LEU LEU A . n A 1 69 LYS 69 210 210 LYS LYS A . n A 1 70 VAL 70 211 211 VAL VAL A . n A 1 71 SER 71 212 212 SER SER A . n A 1 72 LEU 72 213 213 LEU LEU A . n A 1 73 GLN 73 214 214 GLN GLN A . n A 1 74 LEU 74 215 215 LEU LEU A . n A 1 75 ARG 75 216 216 ARG ARG A . n A 1 76 GLY 76 217 217 GLY GLY A . n A 1 77 GLU 77 218 218 GLU GLU A . n A 1 78 ASP 78 219 219 ASP ASP A . n A 1 79 GLY 79 220 220 GLY GLY A . n A 1 80 SER 80 221 221 SER SER A . n A 1 81 VAL 81 222 222 VAL VAL A . n A 1 82 TRP 82 223 223 TRP TRP A . n A 1 83 ASN 83 224 224 ASN ASN A . n A 1 84 TYR 84 225 225 TYR TYR A . n A 1 85 LYS 85 226 226 LYS LYS A . n A 1 86 PRO 86 227 227 PRO PRO A . n A 1 87 PRO 87 228 228 PRO PRO A . n A 1 88 ALA 88 229 229 ALA ALA A . n A 1 89 ASP 89 230 230 ASP ASP A . n A 1 90 SER 90 231 231 SER SER A . n A 1 91 GLY 91 232 232 GLY GLY A . n A 1 92 GLY 92 233 233 GLY GLY A . n A 1 93 LYS 93 234 234 LYS LYS A . n A 1 94 GLU 94 235 235 GLU GLU A . n A 1 95 ILE 95 236 236 ILE ILE A . n A 1 96 PHE 96 237 237 PHE PHE A . n A 1 97 SER 97 238 238 SER SER A . n A 1 98 LEU 98 239 239 LEU LEU A . n A 1 99 LEU 99 240 240 LEU LEU A . n A 1 100 PRO 100 241 241 PRO PRO A . n A 1 101 HIS 101 242 242 HIS HIS A . n A 1 102 MET 102 243 243 MET MET A . n A 1 103 ALA 103 244 244 ALA ALA A . n A 1 104 ASP 104 245 245 ASP ASP A . n A 1 105 MET 105 246 246 MET MET A . n A 1 106 SER 106 247 247 SER SER A . n A 1 107 THR 107 248 248 THR THR A . n A 1 108 TYR 108 249 249 TYR TYR A . n A 1 109 MET 109 250 250 MET MET A . n A 1 110 PHE 110 251 251 PHE PHE A . n A 1 111 LYS 111 252 252 LYS LYS A . n A 1 112 GLY 112 253 253 GLY GLY A . n A 1 113 ILE 113 254 254 ILE ILE A . n A 1 114 ILE 114 255 255 ILE ILE A . n A 1 115 SER 115 256 256 SER SER A . n A 1 116 PHE 116 257 257 PHE PHE A . n A 1 117 ALA 117 258 258 ALA ALA A . n A 1 118 LYS 118 259 259 LYS LYS A . n A 1 119 VAL 119 260 260 VAL VAL A . n A 1 120 ILE 120 261 261 ILE ILE A . n A 1 121 SER 121 262 262 SER SER A . n A 1 122 TYR 122 263 263 TYR TYR A . n A 1 123 PHE 123 264 264 PHE PHE A . n A 1 124 ARG 124 265 265 ARG ARG A . n A 1 125 ASP 125 266 266 ASP ASP A . n A 1 126 LEU 126 267 267 LEU LEU A . n A 1 127 PRO 127 268 268 PRO PRO A . n A 1 128 ILE 128 269 269 ILE ILE A . n A 1 129 GLU 129 270 270 GLU GLU A . n A 1 130 ASP 130 271 271 ASP ASP A . n A 1 131 GLN 131 272 272 GLN GLN A . n A 1 132 ILE 132 273 273 ILE ILE A . n A 1 133 SER 133 274 274 SER SER A . n A 1 134 LEU 134 275 275 LEU LEU A . n A 1 135 LEU 135 276 276 LEU LEU A . n A 1 136 LYS 136 277 277 LYS LYS A . n A 1 137 GLY 137 278 278 GLY GLY A . n A 1 138 ALA 138 279 279 ALA ALA A . n A 1 139 ALA 139 280 280 ALA ALA A . n A 1 140 PHE 140 281 281 PHE PHE A . n A 1 141 GLU 141 282 282 GLU GLU A . n A 1 142 LEU 142 283 283 LEU LEU A . n A 1 143 CYS 143 284 284 CYS CYS A . n A 1 144 GLN 144 285 285 GLN GLN A . n A 1 145 LEU 145 286 286 LEU LEU A . n A 1 146 ARG 146 287 287 ARG ARG A . n A 1 147 PHE 147 288 288 PHE PHE A . n A 1 148 ASN 148 289 289 ASN ASN A . n A 1 149 THR 149 290 290 THR THR A . n A 1 150 VAL 150 291 291 VAL VAL A . n A 1 151 PHE 151 292 292 PHE PHE A . n A 1 152 ASN 152 293 293 ASN ASN A . n A 1 153 ALA 153 294 294 ALA ALA A . n A 1 154 GLU 154 295 295 GLU GLU A . n A 1 155 THR 155 296 296 THR THR A . n A 1 156 GLY 156 297 297 GLY GLY A . n A 1 157 THR 157 298 298 THR THR A . n A 1 158 TRP 158 299 299 TRP TRP A . n A 1 159 GLU 159 300 300 GLU GLU A . n A 1 160 CYS 160 301 301 CYS CYS A . n A 1 161 GLY 161 302 302 GLY GLY A . n A 1 162 ARG 162 303 303 ARG ARG A . n A 1 163 LEU 163 304 304 LEU LEU A . n A 1 164 SER 164 305 305 SER SER A . n A 1 165 TYR 165 306 306 TYR TYR A . n A 1 166 CYS 166 307 307 CYS CYS A . n A 1 167 LEU 167 308 308 LEU LEU A . n A 1 168 GLU 168 309 309 GLU GLU A . n A 1 169 ASP 169 310 ? ? ? A . n A 1 170 THR 170 311 ? ? ? A . n A 1 171 ALA 171 312 ? ? ? A . n A 1 172 GLY 172 313 ? ? ? A . n A 1 173 GLY 173 314 ? ? ? A . n A 1 174 PHE 174 315 ? ? ? A . n A 1 175 GLN 175 316 316 GLN GLN A . n A 1 176 GLN 176 317 317 GLN GLN A . n A 1 177 LEU 177 318 318 LEU LEU A . n A 1 178 LEU 178 319 319 LEU LEU A . n A 1 179 LEU 179 320 320 LEU LEU A . n A 1 180 GLU 180 321 321 GLU GLU A . n A 1 181 PRO 181 322 322 PRO PRO A . n A 1 182 MET 182 323 323 MET MET A . n A 1 183 LEU 183 324 324 LEU LEU A . n A 1 184 LYS 184 325 325 LYS LYS A . n A 1 185 PHE 185 326 326 PHE PHE A . n A 1 186 HIS 186 327 327 HIS HIS A . n A 1 187 TYR 187 328 328 TYR TYR A . n A 1 188 MET 188 329 329 MET MET A . n A 1 189 LEU 189 330 330 LEU LEU A . n A 1 190 LYS 190 331 331 LYS LYS A . n A 1 191 LYS 191 332 332 LYS LYS A . n A 1 192 LEU 192 333 333 LEU LEU A . n A 1 193 GLN 193 334 334 GLN GLN A . n A 1 194 LEU 194 335 335 LEU LEU A . n A 1 195 HIS 195 336 336 HIS HIS A . n A 1 196 GLU 196 337 337 GLU GLU A . n A 1 197 GLU 197 338 338 GLU GLU A . n A 1 198 GLU 198 339 339 GLU GLU A . n A 1 199 TYR 199 340 340 TYR TYR A . n A 1 200 VAL 200 341 341 VAL VAL A . n A 1 201 LEU 201 342 342 LEU LEU A . n A 1 202 MET 202 343 343 MET MET A . n A 1 203 GLN 203 344 344 GLN GLN A . n A 1 204 ALA 204 345 345 ALA ALA A . n A 1 205 ILE 205 346 346 ILE ILE A . n A 1 206 SER 206 347 347 SER SER A . n A 1 207 LEU 207 348 348 LEU LEU A . n A 1 208 PHE 208 349 349 PHE PHE A . n A 1 209 SER 209 350 350 SER SER A . n A 1 210 PRO 210 351 351 PRO PRO A . n A 1 211 ASP 211 352 352 ASP ASP A . n A 1 212 ARG 212 353 353 ARG ARG A . n A 1 213 PRO 213 354 354 PRO PRO A . n A 1 214 GLY 214 355 355 GLY GLY A . n A 1 215 VAL 215 356 356 VAL VAL A . n A 1 216 LEU 216 357 357 LEU LEU A . n A 1 217 GLN 217 358 358 GLN GLN A . n A 1 218 HIS 218 359 359 HIS HIS A . n A 1 219 ARG 219 360 360 ARG ARG A . n A 1 220 VAL 220 361 361 VAL VAL A . n A 1 221 VAL 221 362 362 VAL VAL A . n A 1 222 ASP 222 363 363 ASP ASP A . n A 1 223 GLN 223 364 364 GLN GLN A . n A 1 224 LEU 224 365 365 LEU LEU A . n A 1 225 GLN 225 366 366 GLN GLN A . n A 1 226 GLU 226 367 367 GLU GLU A . n A 1 227 GLN 227 368 368 GLN GLN A . n A 1 228 PHE 228 369 369 PHE PHE A . n A 1 229 ALA 229 370 370 ALA ALA A . n A 1 230 ILE 230 371 371 ILE ILE A . n A 1 231 THR 231 372 372 THR THR A . n A 1 232 LEU 232 373 373 LEU LEU A . n A 1 233 LYS 233 374 374 LYS LYS A . n A 1 234 SER 234 375 375 SER SER A . n A 1 235 TYR 235 376 376 TYR TYR A . n A 1 236 ILE 236 377 377 ILE ILE A . n A 1 237 GLU 237 378 378 GLU GLU A . n A 1 238 CYS 238 379 379 CYS CYS A . n A 1 239 ASN 239 380 380 ASN ASN A . n A 1 240 ARG 240 381 381 ARG ARG A . n A 1 241 PRO 241 382 382 PRO PRO A . n A 1 242 GLN 242 383 383 GLN GLN A . n A 1 243 PRO 243 384 384 PRO PRO A . n A 1 244 ALA 244 385 385 ALA ALA A . n A 1 245 HIS 245 386 386 HIS HIS A . n A 1 246 ARG 246 387 387 ARG ARG A . n A 1 247 PHE 247 388 388 PHE PHE A . n A 1 248 LEU 248 389 389 LEU LEU A . n A 1 249 PHE 249 390 390 PHE PHE A . n A 1 250 LEU 250 391 391 LEU LEU A . n A 1 251 LYS 251 392 392 LYS LYS A . n A 1 252 ILE 252 393 393 ILE ILE A . n A 1 253 MET 253 394 394 MET MET A . n A 1 254 ALA 254 395 395 ALA ALA A . n A 1 255 MET 255 396 396 MET MET A . n A 1 256 LEU 256 397 397 LEU LEU A . n A 1 257 THR 257 398 398 THR THR A . n A 1 258 GLU 258 399 399 GLU GLU A . n A 1 259 LEU 259 400 400 LEU LEU A . n A 1 260 ARG 260 401 401 ARG ARG A . n A 1 261 SER 261 402 402 SER SER A . n A 1 262 ILE 262 403 403 ILE ILE A . n A 1 263 ASN 263 404 404 ASN ASN A . n A 1 264 ALA 264 405 405 ALA ALA A . n A 1 265 GLN 265 406 406 GLN GLN A . n A 1 266 HIS 266 407 407 HIS HIS A . n A 1 267 THR 267 408 408 THR THR A . n A 1 268 GLN 268 409 409 GLN GLN A . n A 1 269 ARG 269 410 410 ARG ARG A . n A 1 270 LEU 270 411 411 LEU LEU A . n A 1 271 LEU 271 412 412 LEU LEU A . n A 1 272 ARG 272 413 413 ARG ARG A . n A 1 273 ILE 273 414 414 ILE ILE A . n A 1 274 GLN 274 415 415 GLN GLN A . n A 1 275 ASP 275 416 416 ASP ASP A . n A 1 276 ILE 276 417 417 ILE ILE A . n A 1 277 HIS 277 418 418 HIS HIS A . n A 1 278 PRO 278 419 419 PRO PRO A . n A 1 279 PHE 279 420 420 PHE PHE A . n A 1 280 ALA 280 421 421 ALA ALA A . n A 1 281 THR 281 422 422 THR THR A . n A 1 282 PRO 282 423 423 PRO PRO A . n A 1 283 LEU 283 424 424 LEU LEU A . n A 1 284 MET 284 425 425 MET MET A . n A 1 285 GLN 285 426 426 GLN GLN A . n A 1 286 GLU 286 427 427 GLU GLU A . n A 1 287 LEU 287 428 428 LEU LEU A . n A 1 288 PHE 288 429 429 PHE PHE A . n A 1 289 GLY 289 430 430 GLY GLY A . n A 1 290 ILE 290 431 431 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2Q4 1 501 1 2Q4 LG1 A . C 3 GOL 1 502 1 GOL GOL A . D 4 HOH 1 601 1 HOH HOH A . D 4 HOH 2 602 2 HOH HOH A . D 4 HOH 3 603 3 HOH HOH A . D 4 HOH 4 604 4 HOH HOH A . D 4 HOH 5 605 5 HOH HOH A . D 4 HOH 6 606 6 HOH HOH A . D 4 HOH 7 607 7 HOH HOH A . D 4 HOH 8 608 9 HOH HOH A . D 4 HOH 9 609 10 HOH HOH A . D 4 HOH 10 610 11 HOH HOH A . D 4 HOH 11 611 13 HOH HOH A . D 4 HOH 12 612 16 HOH HOH A . D 4 HOH 13 613 18 HOH HOH A . D 4 HOH 14 614 19 HOH HOH A . D 4 HOH 15 615 20 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 BUSTER-TNT 'REFMAC 5.2.0019' ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 2 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 DENZO . ? ? ? ? 'data reduction' ? ? ? 4 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 5 REFMAC 5.2.0019 ? ? ? ? refinement ? ? ? # _cell.length_a 91.760 _cell.length_b 91.760 _cell.length_c 85.651 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4NY9 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.entry_id 4NY9 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 96 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4NY9 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 58.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.temp 296 _exptl_crystal_grow.pdbx_details ;0.1M imidazole, 8-10%(V/V)isopropanol. Apo crystal was soaked with 5 mM compound and Crystals harvested next day using 32% ethylene glycol as cryoprotectant, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 296K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX-300' _diffrn_detector.pdbx_collection_date 2008-03-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1 1.0 2 1.0 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength 1 _diffrn_source.pdbx_synchrotron_site APS # _reflns.entry_id 4NY9 _reflns.d_resolution_high 2.800 _reflns.d_resolution_low 50.000 _reflns.number_obs 9474 _reflns.pdbx_Rmerge_I_obs 0.115 _reflns.pdbx_netI_over_sigmaI 17.000 _reflns.pdbx_redundancy 6.600 _reflns.percent_possible_obs 99.800 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4NY9 _refine.ls_d_res_high 2.8000 _refine.ls_d_res_low 45.8800 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8000 _refine.ls_number_reflns_obs 9443 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2316 _refine.ls_R_factor_R_work 0.2283 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2982 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_number_reflns_R_free 450 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 60.0612 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0100 _refine.aniso_B[2][2] 0.0100 _refine.aniso_B[3][3] -0.0200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9260 _refine.correlation_coeff_Fo_to_Fc_free 0.8940 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 1.8110 _refine.pdbx_overall_ESU_R_Free 0.4180 _refine.overall_SU_ML 0.3220 _refine.overall_SU_B 15.4810 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 96.150 _refine.B_iso_min 36.810 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2127 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 2178 _refine_hist.d_res_high 2.8000 _refine_hist.d_res_low 45.8800 # _refine_ls_shell.d_res_high 2.8010 _refine_ls_shell.d_res_low 2.8740 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.1300 _refine_ls_shell.number_reflns_R_work 640 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2590 _refine_ls_shell.R_factor_R_free 0.3190 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 682 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4NY9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 4NY9 _struct.title ;Crystal Structure Of the Human PXR-LBD In Complex With N-{(2R)-1-[(4S)-4-(4-chlorophenyl)-4-hydroxy-3,3-dimethylpiperidin-1-yl]-3-methyl-1-oxobutan-2-yl}-3-hydroxy-3-methylbutanamide ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NY9 _struct_keywords.text ;pregnane X receptor, PXR, ligand binding domain, steroid receptor coactivator-1; CCR1, Chemokine Receptor-1; NR, nuclear receptor; AF, activation function; MDR1, multi-drug resistance gene-1, TRANSCRIPTION-TRANSCRIPTION inhibitor complex ; _struct_keywords.pdbx_keywords 'TRANSCRIPTION/TRANSCRIPTION inhibitor' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NR1I2_HUMAN _struct_ref.pdbx_db_accession O75469 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GLTEEQRMMIRELMDAQMKTFDTTFSHFKNFRLPGVLSSGCELPESLQAPSREEAAKWSQVRKDLCSLKVSLQLRGEDGS VWNYKPPADSGGKEIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGTWEC GRLSYCLEDTAGGFQQLLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNR PQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFGI ; _struct_ref.pdbx_align_begin 142 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NY9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 290 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O75469 _struct_ref_seq.db_align_beg 142 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 431 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 142 _struct_ref_seq.pdbx_auth_seq_align_end 431 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 1810 ? 2 MORE -8 ? 2 'SSA (A^2)' 26290 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2 A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 42.8255000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 3 ? PHE A 21 ? THR A 144 PHE A 162 1 ? 19 HELX_P HELX_P2 2 ARG A 62 ? SER A 67 ? ARG A 203 SER A 208 1 ? 6 HELX_P HELX_P3 3 LYS A 93 ? SER A 97 ? LYS A 234 SER A 238 5 ? 5 HELX_P HELX_P4 4 LEU A 98 ? VAL A 119 ? LEU A 239 VAL A 260 1 ? 22 HELX_P HELX_P5 5 ILE A 120 ? ASP A 125 ? ILE A 261 ASP A 266 1 ? 6 HELX_P HELX_P6 6 PRO A 127 ? VAL A 150 ? PRO A 268 VAL A 291 1 ? 24 HELX_P HELX_P7 7 GLU A 180 ? LEU A 192 ? GLU A 321 LEU A 333 1 ? 13 HELX_P HELX_P8 8 HIS A 195 ? PHE A 208 ? HIS A 336 PHE A 349 1 ? 14 HELX_P HELX_P9 9 GLN A 217 ? ARG A 240 ? GLN A 358 ARG A 381 1 ? 24 HELX_P HELX_P10 10 PHE A 247 ? HIS A 277 ? PHE A 388 HIS A 418 1 ? 31 HELX_P HELX_P11 11 THR A 281 ? GLY A 289 ? THR A 422 GLY A 430 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 81 ? TYR A 84 ? VAL A 222 TYR A 225 A 2 VAL A 70 ? ARG A 75 ? VAL A 211 ARG A 216 A 3 LEU A 163 ? LEU A 167 ? LEU A 304 LEU A 308 A 4 THR A 157 ? CYS A 160 ? THR A 298 CYS A 301 A 5 PHE A 151 ? ASN A 152 ? PHE A 292 ASN A 293 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 84 ? O TYR A 225 N LEU A 72 ? N LEU A 213 A 2 3 N SER A 71 ? N SER A 212 O CYS A 166 ? O CYS A 307 A 3 4 O TYR A 165 ? O TYR A 306 N TRP A 158 ? N TRP A 299 A 4 5 O THR A 157 ? O THR A 298 N ASN A 152 ? N ASN A 293 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 2Q4 501 ? 9 'BINDING SITE FOR RESIDUE 2Q4 A 501' AC2 Software A GOL 502 ? 7 'BINDING SITE FOR RESIDUE GOL A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 VAL A 70 ? VAL A 211 . ? 1_555 ? 2 AC1 9 MET A 102 ? MET A 243 . ? 1_555 ? 3 AC1 9 ALA A 103 ? ALA A 244 . ? 1_555 ? 4 AC1 9 GLN A 144 ? GLN A 285 . ? 1_555 ? 5 AC1 9 PHE A 147 ? PHE A 288 . ? 1_555 ? 6 AC1 9 TRP A 158 ? TRP A 299 . ? 1_555 ? 7 AC1 9 TYR A 165 ? TYR A 306 . ? 1_555 ? 8 AC1 9 HIS A 266 ? HIS A 407 . ? 1_555 ? 9 AC1 9 HOH D . ? HOH A 605 . ? 1_555 ? 10 AC2 7 THR A 20 ? THR A 161 . ? 1_555 ? 11 AC2 7 PHE A 21 ? PHE A 162 . ? 1_555 ? 12 AC2 7 ASP A 22 ? ASP A 163 . ? 1_555 ? 13 AC2 7 TYR A 108 ? TYR A 249 . ? 1_555 ? 14 AC2 7 MET A 109 ? MET A 250 . ? 1_555 ? 15 AC2 7 GLY A 112 ? GLY A 253 . ? 1_555 ? 16 AC2 7 ARG A 146 ? ARG A 287 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 163 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 612 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 203 ? ? -164.48 6.58 2 1 LYS A 234 ? ? 140.50 -25.30 3 1 CYS A 301 ? ? -102.98 70.72 4 1 GLN A 317 ? ? 58.05 87.13 5 1 ASP A 352 ? ? -101.23 64.93 6 1 PRO A 354 ? ? -23.21 120.52 7 1 PRO A 384 ? ? -57.05 -2.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 177 ? A VAL 36 2 1 Y 1 A LEU 178 ? A LEU 37 3 1 Y 1 A SER 179 ? A SER 38 4 1 Y 1 A SER 180 ? A SER 39 5 1 Y 1 A GLY 181 ? A GLY 40 6 1 Y 1 A CYS 182 ? A CYS 41 7 1 Y 1 A GLU 183 ? A GLU 42 8 1 Y 1 A LEU 184 ? A LEU 43 9 1 Y 1 A PRO 185 ? A PRO 44 10 1 Y 1 A GLU 186 ? A GLU 45 11 1 Y 1 A SER 187 ? A SER 46 12 1 Y 1 A LEU 188 ? A LEU 47 13 1 Y 1 A GLN 189 ? A GLN 48 14 1 Y 1 A ALA 190 ? A ALA 49 15 1 Y 1 A PRO 191 ? A PRO 50 16 1 Y 1 A SER 192 ? A SER 51 17 1 Y 1 A ARG 193 ? A ARG 52 18 1 Y 1 A GLU 194 ? A GLU 53 19 1 Y 1 A GLU 195 ? A GLU 54 20 1 Y 1 A ALA 196 ? A ALA 55 21 1 Y 1 A ALA 197 ? A ALA 56 22 1 Y 1 A LYS 198 ? A LYS 57 23 1 Y 1 A TRP 199 ? A TRP 58 24 1 Y 1 A SER 200 ? A SER 59 25 1 Y 1 A ASP 310 ? A ASP 169 26 1 Y 1 A THR 311 ? A THR 170 27 1 Y 1 A ALA 312 ? A ALA 171 28 1 Y 1 A GLY 313 ? A GLY 172 29 1 Y 1 A GLY 314 ? A GLY 173 30 1 Y 1 A PHE 315 ? A PHE 174 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2Q4 CL CL N N 1 2Q4 C6 C Y N 2 2Q4 C3 C Y N 3 2Q4 C4 C Y N 4 2Q4 C2 C Y N 5 2Q4 C5 C Y N 6 2Q4 C1 C Y N 7 2Q4 C12 C N S 8 2Q4 C9 C N N 9 2Q4 O28 O N N 10 2Q4 C13 C N N 11 2Q4 C14 C N N 12 2Q4 C15 C N N 13 2Q4 C11 C N N 14 2Q4 N24 N N N 15 2Q4 C10 C N N 16 2Q4 C7 C N N 17 2Q4 O26 O N N 18 2Q4 C21 C N R 19 2Q4 C22 C N N 20 2Q4 C17 C N N 21 2Q4 C16 C N N 22 2Q4 N25 N N N 23 2Q4 C8 C N N 24 2Q4 O27 O N N 25 2Q4 C20 C N N 26 2Q4 C23 C N N 27 2Q4 O29 O N N 28 2Q4 C19 C N N 29 2Q4 C18 C N N 30 2Q4 H1 H N N 31 2Q4 H2 H N N 32 2Q4 H3 H N N 33 2Q4 H4 H N N 34 2Q4 H5 H N N 35 2Q4 H6 H N N 36 2Q4 H7 H N N 37 2Q4 H8 H N N 38 2Q4 H9 H N N 39 2Q4 H10 H N N 40 2Q4 H11 H N N 41 2Q4 H12 H N N 42 2Q4 H13 H N N 43 2Q4 H14 H N N 44 2Q4 H15 H N N 45 2Q4 H16 H N N 46 2Q4 H17 H N N 47 2Q4 H18 H N N 48 2Q4 H19 H N N 49 2Q4 H20 H N N 50 2Q4 H21 H N N 51 2Q4 H22 H N N 52 2Q4 H23 H N N 53 2Q4 H24 H N N 54 2Q4 H25 H N N 55 2Q4 H26 H N N 56 2Q4 H27 H N N 57 2Q4 H28 H N N 58 2Q4 H29 H N N 59 2Q4 H30 H N N 60 2Q4 H31 H N N 61 2Q4 H32 H N N 62 2Q4 H33 H N N 63 2Q4 H34 H N N 64 2Q4 H35 H N N 65 ALA N N N N 66 ALA CA C N S 67 ALA C C N N 68 ALA O O N N 69 ALA CB C N N 70 ALA OXT O N N 71 ALA H H N N 72 ALA H2 H N N 73 ALA HA H N N 74 ALA HB1 H N N 75 ALA HB2 H N N 76 ALA HB3 H N N 77 ALA HXT H N N 78 ARG N N N N 79 ARG CA C N S 80 ARG C C N N 81 ARG O O N N 82 ARG CB C N N 83 ARG CG C N N 84 ARG CD C N N 85 ARG NE N N N 86 ARG CZ C N N 87 ARG NH1 N N N 88 ARG NH2 N N N 89 ARG OXT O N N 90 ARG H H N N 91 ARG H2 H N N 92 ARG HA H N N 93 ARG HB2 H N N 94 ARG HB3 H N N 95 ARG HG2 H N N 96 ARG HG3 H N N 97 ARG HD2 H N N 98 ARG HD3 H N N 99 ARG HE H N N 100 ARG HH11 H N N 101 ARG HH12 H N N 102 ARG HH21 H N N 103 ARG HH22 H N N 104 ARG HXT H N N 105 ASN N N N N 106 ASN CA C N S 107 ASN C C N N 108 ASN O O N N 109 ASN CB C N N 110 ASN CG C N N 111 ASN OD1 O N N 112 ASN ND2 N N N 113 ASN OXT O N N 114 ASN H H N N 115 ASN H2 H N N 116 ASN HA H N N 117 ASN HB2 H N N 118 ASN HB3 H N N 119 ASN HD21 H N N 120 ASN HD22 H N N 121 ASN HXT H N N 122 ASP N N N N 123 ASP CA C N S 124 ASP C C N N 125 ASP O O N N 126 ASP CB C N N 127 ASP CG C N N 128 ASP OD1 O N N 129 ASP OD2 O N N 130 ASP OXT O N N 131 ASP H H N N 132 ASP H2 H N N 133 ASP HA H N N 134 ASP HB2 H N N 135 ASP HB3 H N N 136 ASP HD2 H N N 137 ASP HXT H N N 138 CYS N N N N 139 CYS CA C N R 140 CYS C C N N 141 CYS O O N N 142 CYS CB C N N 143 CYS SG S N N 144 CYS OXT O N N 145 CYS H H N N 146 CYS H2 H N N 147 CYS HA H N N 148 CYS HB2 H N N 149 CYS HB3 H N N 150 CYS HG H N N 151 CYS HXT H N N 152 GLN N N N N 153 GLN CA C N S 154 GLN C C N N 155 GLN O O N N 156 GLN CB C N N 157 GLN CG C N N 158 GLN CD C N N 159 GLN OE1 O N N 160 GLN NE2 N N N 161 GLN OXT O N N 162 GLN H H N N 163 GLN H2 H N N 164 GLN HA H N N 165 GLN HB2 H N N 166 GLN HB3 H N N 167 GLN HG2 H N N 168 GLN HG3 H N N 169 GLN HE21 H N N 170 GLN HE22 H N N 171 GLN HXT H N N 172 GLU N N N N 173 GLU CA C N S 174 GLU C C N N 175 GLU O O N N 176 GLU CB C N N 177 GLU CG C N N 178 GLU CD C N N 179 GLU OE1 O N N 180 GLU OE2 O N N 181 GLU OXT O N N 182 GLU H H N N 183 GLU H2 H N N 184 GLU HA H N N 185 GLU HB2 H N N 186 GLU HB3 H N N 187 GLU HG2 H N N 188 GLU HG3 H N N 189 GLU HE2 H N N 190 GLU HXT H N N 191 GLY N N N N 192 GLY CA C N N 193 GLY C C N N 194 GLY O O N N 195 GLY OXT O N N 196 GLY H H N N 197 GLY H2 H N N 198 GLY HA2 H N N 199 GLY HA3 H N N 200 GLY HXT H N N 201 GOL C1 C N N 202 GOL O1 O N N 203 GOL C2 C N N 204 GOL O2 O N N 205 GOL C3 C N N 206 GOL O3 O N N 207 GOL H11 H N N 208 GOL H12 H N N 209 GOL HO1 H N N 210 GOL H2 H N N 211 GOL HO2 H N N 212 GOL H31 H N N 213 GOL H32 H N N 214 GOL HO3 H N N 215 HIS N N N N 216 HIS CA C N S 217 HIS C C N N 218 HIS O O N N 219 HIS CB C N N 220 HIS CG C Y N 221 HIS ND1 N Y N 222 HIS CD2 C Y N 223 HIS CE1 C Y N 224 HIS NE2 N Y N 225 HIS OXT O N N 226 HIS H H N N 227 HIS H2 H N N 228 HIS HA H N N 229 HIS HB2 H N N 230 HIS HB3 H N N 231 HIS HD1 H N N 232 HIS HD2 H N N 233 HIS HE1 H N N 234 HIS HE2 H N N 235 HIS HXT H N N 236 HOH O O N N 237 HOH H1 H N N 238 HOH H2 H N N 239 ILE N N N N 240 ILE CA C N S 241 ILE C C N N 242 ILE O O N N 243 ILE CB C N S 244 ILE CG1 C N N 245 ILE CG2 C N N 246 ILE CD1 C N N 247 ILE OXT O N N 248 ILE H H N N 249 ILE H2 H N N 250 ILE HA H N N 251 ILE HB H N N 252 ILE HG12 H N N 253 ILE HG13 H N N 254 ILE HG21 H N N 255 ILE HG22 H N N 256 ILE HG23 H N N 257 ILE HD11 H N N 258 ILE HD12 H N N 259 ILE HD13 H N N 260 ILE HXT H N N 261 LEU N N N N 262 LEU CA C N S 263 LEU C C N N 264 LEU O O N N 265 LEU CB C N N 266 LEU CG C N N 267 LEU CD1 C N N 268 LEU CD2 C N N 269 LEU OXT O N N 270 LEU H H N N 271 LEU H2 H N N 272 LEU HA H N N 273 LEU HB2 H N N 274 LEU HB3 H N N 275 LEU HG H N N 276 LEU HD11 H N N 277 LEU HD12 H N N 278 LEU HD13 H N N 279 LEU HD21 H N N 280 LEU HD22 H N N 281 LEU HD23 H N N 282 LEU HXT H N N 283 LYS N N N N 284 LYS CA C N S 285 LYS C C N N 286 LYS O O N N 287 LYS CB C N N 288 LYS CG C N N 289 LYS CD C N N 290 LYS CE C N N 291 LYS NZ N N N 292 LYS OXT O N N 293 LYS H H N N 294 LYS H2 H N N 295 LYS HA H N N 296 LYS HB2 H N N 297 LYS HB3 H N N 298 LYS HG2 H N N 299 LYS HG3 H N N 300 LYS HD2 H N N 301 LYS HD3 H N N 302 LYS HE2 H N N 303 LYS HE3 H N N 304 LYS HZ1 H N N 305 LYS HZ2 H N N 306 LYS HZ3 H N N 307 LYS HXT H N N 308 MET N N N N 309 MET CA C N S 310 MET C C N N 311 MET O O N N 312 MET CB C N N 313 MET CG C N N 314 MET SD S N N 315 MET CE C N N 316 MET OXT O N N 317 MET H H N N 318 MET H2 H N N 319 MET HA H N N 320 MET HB2 H N N 321 MET HB3 H N N 322 MET HG2 H N N 323 MET HG3 H N N 324 MET HE1 H N N 325 MET HE2 H N N 326 MET HE3 H N N 327 MET HXT H N N 328 PHE N N N N 329 PHE CA C N S 330 PHE C C N N 331 PHE O O N N 332 PHE CB C N N 333 PHE CG C Y N 334 PHE CD1 C Y N 335 PHE CD2 C Y N 336 PHE CE1 C Y N 337 PHE CE2 C Y N 338 PHE CZ C Y N 339 PHE OXT O N N 340 PHE H H N N 341 PHE H2 H N N 342 PHE HA H N N 343 PHE HB2 H N N 344 PHE HB3 H N N 345 PHE HD1 H N N 346 PHE HD2 H N N 347 PHE HE1 H N N 348 PHE HE2 H N N 349 PHE HZ H N N 350 PHE HXT H N N 351 PRO N N N N 352 PRO CA C N S 353 PRO C C N N 354 PRO O O N N 355 PRO CB C N N 356 PRO CG C N N 357 PRO CD C N N 358 PRO OXT O N N 359 PRO H H N N 360 PRO HA H N N 361 PRO HB2 H N N 362 PRO HB3 H N N 363 PRO HG2 H N N 364 PRO HG3 H N N 365 PRO HD2 H N N 366 PRO HD3 H N N 367 PRO HXT H N N 368 SER N N N N 369 SER CA C N S 370 SER C C N N 371 SER O O N N 372 SER CB C N N 373 SER OG O N N 374 SER OXT O N N 375 SER H H N N 376 SER H2 H N N 377 SER HA H N N 378 SER HB2 H N N 379 SER HB3 H N N 380 SER HG H N N 381 SER HXT H N N 382 THR N N N N 383 THR CA C N S 384 THR C C N N 385 THR O O N N 386 THR CB C N R 387 THR OG1 O N N 388 THR CG2 C N N 389 THR OXT O N N 390 THR H H N N 391 THR H2 H N N 392 THR HA H N N 393 THR HB H N N 394 THR HG1 H N N 395 THR HG21 H N N 396 THR HG22 H N N 397 THR HG23 H N N 398 THR HXT H N N 399 TRP N N N N 400 TRP CA C N S 401 TRP C C N N 402 TRP O O N N 403 TRP CB C N N 404 TRP CG C Y N 405 TRP CD1 C Y N 406 TRP CD2 C Y N 407 TRP NE1 N Y N 408 TRP CE2 C Y N 409 TRP CE3 C Y N 410 TRP CZ2 C Y N 411 TRP CZ3 C Y N 412 TRP CH2 C Y N 413 TRP OXT O N N 414 TRP H H N N 415 TRP H2 H N N 416 TRP HA H N N 417 TRP HB2 H N N 418 TRP HB3 H N N 419 TRP HD1 H N N 420 TRP HE1 H N N 421 TRP HE3 H N N 422 TRP HZ2 H N N 423 TRP HZ3 H N N 424 TRP HH2 H N N 425 TRP HXT H N N 426 TYR N N N N 427 TYR CA C N S 428 TYR C C N N 429 TYR O O N N 430 TYR CB C N N 431 TYR CG C Y N 432 TYR CD1 C Y N 433 TYR CD2 C Y N 434 TYR CE1 C Y N 435 TYR CE2 C Y N 436 TYR CZ C Y N 437 TYR OH O N N 438 TYR OXT O N N 439 TYR H H N N 440 TYR H2 H N N 441 TYR HA H N N 442 TYR HB2 H N N 443 TYR HB3 H N N 444 TYR HD1 H N N 445 TYR HD2 H N N 446 TYR HE1 H N N 447 TYR HE2 H N N 448 TYR HH H N N 449 TYR HXT H N N 450 VAL N N N N 451 VAL CA C N S 452 VAL C C N N 453 VAL O O N N 454 VAL CB C N N 455 VAL CG1 C N N 456 VAL CG2 C N N 457 VAL OXT O N N 458 VAL H H N N 459 VAL H2 H N N 460 VAL HA H N N 461 VAL HB H N N 462 VAL HG11 H N N 463 VAL HG12 H N N 464 VAL HG13 H N N 465 VAL HG21 H N N 466 VAL HG22 H N N 467 VAL HG23 H N N 468 VAL HXT H N N 469 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2Q4 O28 C12 sing N N 1 2Q4 C10 C9 sing N N 2 2Q4 C10 N24 sing N N 3 2Q4 C9 C12 sing N N 4 2Q4 C12 C5 sing N N 5 2Q4 C12 C13 sing N N 6 2Q4 N24 C11 sing N N 7 2Q4 N24 C7 sing N N 8 2Q4 C1 C5 doub Y N 9 2Q4 C1 C3 sing Y N 10 2Q4 C16 C22 sing N N 11 2Q4 C5 C2 sing Y N 12 2Q4 C11 C13 sing N N 13 2Q4 C3 C6 doub Y N 14 2Q4 C13 C14 sing N N 15 2Q4 C13 C15 sing N N 16 2Q4 C22 C17 sing N N 17 2Q4 C22 C21 sing N N 18 2Q4 C7 O26 doub N N 19 2Q4 C7 C21 sing N N 20 2Q4 C2 C4 doub Y N 21 2Q4 C6 C4 sing Y N 22 2Q4 C6 CL sing N N 23 2Q4 C21 N25 sing N N 24 2Q4 N25 C8 sing N N 25 2Q4 O29 C23 sing N N 26 2Q4 C8 O27 doub N N 27 2Q4 C8 C20 sing N N 28 2Q4 C23 C20 sing N N 29 2Q4 C23 C18 sing N N 30 2Q4 C23 C19 sing N N 31 2Q4 C3 H1 sing N N 32 2Q4 C4 H2 sing N N 33 2Q4 C2 H3 sing N N 34 2Q4 C1 H4 sing N N 35 2Q4 C9 H5 sing N N 36 2Q4 C9 H6 sing N N 37 2Q4 O28 H7 sing N N 38 2Q4 C14 H8 sing N N 39 2Q4 C14 H9 sing N N 40 2Q4 C14 H10 sing N N 41 2Q4 C15 H11 sing N N 42 2Q4 C15 H12 sing N N 43 2Q4 C15 H13 sing N N 44 2Q4 C11 H14 sing N N 45 2Q4 C11 H15 sing N N 46 2Q4 C10 H16 sing N N 47 2Q4 C10 H17 sing N N 48 2Q4 C21 H18 sing N N 49 2Q4 C22 H19 sing N N 50 2Q4 C17 H20 sing N N 51 2Q4 C17 H21 sing N N 52 2Q4 C17 H22 sing N N 53 2Q4 C16 H23 sing N N 54 2Q4 C16 H24 sing N N 55 2Q4 C16 H25 sing N N 56 2Q4 N25 H26 sing N N 57 2Q4 C20 H27 sing N N 58 2Q4 C20 H28 sing N N 59 2Q4 O29 H29 sing N N 60 2Q4 C19 H30 sing N N 61 2Q4 C19 H31 sing N N 62 2Q4 C19 H32 sing N N 63 2Q4 C18 H33 sing N N 64 2Q4 C18 H34 sing N N 65 2Q4 C18 H35 sing N N 66 ALA N CA sing N N 67 ALA N H sing N N 68 ALA N H2 sing N N 69 ALA CA C sing N N 70 ALA CA CB sing N N 71 ALA CA HA sing N N 72 ALA C O doub N N 73 ALA C OXT sing N N 74 ALA CB HB1 sing N N 75 ALA CB HB2 sing N N 76 ALA CB HB3 sing N N 77 ALA OXT HXT sing N N 78 ARG N CA sing N N 79 ARG N H sing N N 80 ARG N H2 sing N N 81 ARG CA C sing N N 82 ARG CA CB sing N N 83 ARG CA HA sing N N 84 ARG C O doub N N 85 ARG C OXT sing N N 86 ARG CB CG sing N N 87 ARG CB HB2 sing N N 88 ARG CB HB3 sing N N 89 ARG CG CD sing N N 90 ARG CG HG2 sing N N 91 ARG CG HG3 sing N N 92 ARG CD NE sing N N 93 ARG CD HD2 sing N N 94 ARG CD HD3 sing N N 95 ARG NE CZ sing N N 96 ARG NE HE sing N N 97 ARG CZ NH1 sing N N 98 ARG CZ NH2 doub N N 99 ARG NH1 HH11 sing N N 100 ARG NH1 HH12 sing N N 101 ARG NH2 HH21 sing N N 102 ARG NH2 HH22 sing N N 103 ARG OXT HXT sing N N 104 ASN N CA sing N N 105 ASN N H sing N N 106 ASN N H2 sing N N 107 ASN CA C sing N N 108 ASN CA CB sing N N 109 ASN CA HA sing N N 110 ASN C O doub N N 111 ASN C OXT sing N N 112 ASN CB CG sing N N 113 ASN CB HB2 sing N N 114 ASN CB HB3 sing N N 115 ASN CG OD1 doub N N 116 ASN CG ND2 sing N N 117 ASN ND2 HD21 sing N N 118 ASN ND2 HD22 sing N N 119 ASN OXT HXT sing N N 120 ASP N CA sing N N 121 ASP N H sing N N 122 ASP N H2 sing N N 123 ASP CA C sing N N 124 ASP CA CB sing N N 125 ASP CA HA sing N N 126 ASP C O doub N N 127 ASP C OXT sing N N 128 ASP CB CG sing N N 129 ASP CB HB2 sing N N 130 ASP CB HB3 sing N N 131 ASP CG OD1 doub N N 132 ASP CG OD2 sing N N 133 ASP OD2 HD2 sing N N 134 ASP OXT HXT sing N N 135 CYS N CA sing N N 136 CYS N H sing N N 137 CYS N H2 sing N N 138 CYS CA C sing N N 139 CYS CA CB sing N N 140 CYS CA HA sing N N 141 CYS C O doub N N 142 CYS C OXT sing N N 143 CYS CB SG sing N N 144 CYS CB HB2 sing N N 145 CYS CB HB3 sing N N 146 CYS SG HG sing N N 147 CYS OXT HXT sing N N 148 GLN N CA sing N N 149 GLN N H sing N N 150 GLN N H2 sing N N 151 GLN CA C sing N N 152 GLN CA CB sing N N 153 GLN CA HA sing N N 154 GLN C O doub N N 155 GLN C OXT sing N N 156 GLN CB CG sing N N 157 GLN CB HB2 sing N N 158 GLN CB HB3 sing N N 159 GLN CG CD sing N N 160 GLN CG HG2 sing N N 161 GLN CG HG3 sing N N 162 GLN CD OE1 doub N N 163 GLN CD NE2 sing N N 164 GLN NE2 HE21 sing N N 165 GLN NE2 HE22 sing N N 166 GLN OXT HXT sing N N 167 GLU N CA sing N N 168 GLU N H sing N N 169 GLU N H2 sing N N 170 GLU CA C sing N N 171 GLU CA CB sing N N 172 GLU CA HA sing N N 173 GLU C O doub N N 174 GLU C OXT sing N N 175 GLU CB CG sing N N 176 GLU CB HB2 sing N N 177 GLU CB HB3 sing N N 178 GLU CG CD sing N N 179 GLU CG HG2 sing N N 180 GLU CG HG3 sing N N 181 GLU CD OE1 doub N N 182 GLU CD OE2 sing N N 183 GLU OE2 HE2 sing N N 184 GLU OXT HXT sing N N 185 GLY N CA sing N N 186 GLY N H sing N N 187 GLY N H2 sing N N 188 GLY CA C sing N N 189 GLY CA HA2 sing N N 190 GLY CA HA3 sing N N 191 GLY C O doub N N 192 GLY C OXT sing N N 193 GLY OXT HXT sing N N 194 GOL C1 O1 sing N N 195 GOL C1 C2 sing N N 196 GOL C1 H11 sing N N 197 GOL C1 H12 sing N N 198 GOL O1 HO1 sing N N 199 GOL C2 O2 sing N N 200 GOL C2 C3 sing N N 201 GOL C2 H2 sing N N 202 GOL O2 HO2 sing N N 203 GOL C3 O3 sing N N 204 GOL C3 H31 sing N N 205 GOL C3 H32 sing N N 206 GOL O3 HO3 sing N N 207 HIS N CA sing N N 208 HIS N H sing N N 209 HIS N H2 sing N N 210 HIS CA C sing N N 211 HIS CA CB sing N N 212 HIS CA HA sing N N 213 HIS C O doub N N 214 HIS C OXT sing N N 215 HIS CB CG sing N N 216 HIS CB HB2 sing N N 217 HIS CB HB3 sing N N 218 HIS CG ND1 sing Y N 219 HIS CG CD2 doub Y N 220 HIS ND1 CE1 doub Y N 221 HIS ND1 HD1 sing N N 222 HIS CD2 NE2 sing Y N 223 HIS CD2 HD2 sing N N 224 HIS CE1 NE2 sing Y N 225 HIS CE1 HE1 sing N N 226 HIS NE2 HE2 sing N N 227 HIS OXT HXT sing N N 228 HOH O H1 sing N N 229 HOH O H2 sing N N 230 ILE N CA sing N N 231 ILE N H sing N N 232 ILE N H2 sing N N 233 ILE CA C sing N N 234 ILE CA CB sing N N 235 ILE CA HA sing N N 236 ILE C O doub N N 237 ILE C OXT sing N N 238 ILE CB CG1 sing N N 239 ILE CB CG2 sing N N 240 ILE CB HB sing N N 241 ILE CG1 CD1 sing N N 242 ILE CG1 HG12 sing N N 243 ILE CG1 HG13 sing N N 244 ILE CG2 HG21 sing N N 245 ILE CG2 HG22 sing N N 246 ILE CG2 HG23 sing N N 247 ILE CD1 HD11 sing N N 248 ILE CD1 HD12 sing N N 249 ILE CD1 HD13 sing N N 250 ILE OXT HXT sing N N 251 LEU N CA sing N N 252 LEU N H sing N N 253 LEU N H2 sing N N 254 LEU CA C sing N N 255 LEU CA CB sing N N 256 LEU CA HA sing N N 257 LEU C O doub N N 258 LEU C OXT sing N N 259 LEU CB CG sing N N 260 LEU CB HB2 sing N N 261 LEU CB HB3 sing N N 262 LEU CG CD1 sing N N 263 LEU CG CD2 sing N N 264 LEU CG HG sing N N 265 LEU CD1 HD11 sing N N 266 LEU CD1 HD12 sing N N 267 LEU CD1 HD13 sing N N 268 LEU CD2 HD21 sing N N 269 LEU CD2 HD22 sing N N 270 LEU CD2 HD23 sing N N 271 LEU OXT HXT sing N N 272 LYS N CA sing N N 273 LYS N H sing N N 274 LYS N H2 sing N N 275 LYS CA C sing N N 276 LYS CA CB sing N N 277 LYS CA HA sing N N 278 LYS C O doub N N 279 LYS C OXT sing N N 280 LYS CB CG sing N N 281 LYS CB HB2 sing N N 282 LYS CB HB3 sing N N 283 LYS CG CD sing N N 284 LYS CG HG2 sing N N 285 LYS CG HG3 sing N N 286 LYS CD CE sing N N 287 LYS CD HD2 sing N N 288 LYS CD HD3 sing N N 289 LYS CE NZ sing N N 290 LYS CE HE2 sing N N 291 LYS CE HE3 sing N N 292 LYS NZ HZ1 sing N N 293 LYS NZ HZ2 sing N N 294 LYS NZ HZ3 sing N N 295 LYS OXT HXT sing N N 296 MET N CA sing N N 297 MET N H sing N N 298 MET N H2 sing N N 299 MET CA C sing N N 300 MET CA CB sing N N 301 MET CA HA sing N N 302 MET C O doub N N 303 MET C OXT sing N N 304 MET CB CG sing N N 305 MET CB HB2 sing N N 306 MET CB HB3 sing N N 307 MET CG SD sing N N 308 MET CG HG2 sing N N 309 MET CG HG3 sing N N 310 MET SD CE sing N N 311 MET CE HE1 sing N N 312 MET CE HE2 sing N N 313 MET CE HE3 sing N N 314 MET OXT HXT sing N N 315 PHE N CA sing N N 316 PHE N H sing N N 317 PHE N H2 sing N N 318 PHE CA C sing N N 319 PHE CA CB sing N N 320 PHE CA HA sing N N 321 PHE C O doub N N 322 PHE C OXT sing N N 323 PHE CB CG sing N N 324 PHE CB HB2 sing N N 325 PHE CB HB3 sing N N 326 PHE CG CD1 doub Y N 327 PHE CG CD2 sing Y N 328 PHE CD1 CE1 sing Y N 329 PHE CD1 HD1 sing N N 330 PHE CD2 CE2 doub Y N 331 PHE CD2 HD2 sing N N 332 PHE CE1 CZ doub Y N 333 PHE CE1 HE1 sing N N 334 PHE CE2 CZ sing Y N 335 PHE CE2 HE2 sing N N 336 PHE CZ HZ sing N N 337 PHE OXT HXT sing N N 338 PRO N CA sing N N 339 PRO N CD sing N N 340 PRO N H sing N N 341 PRO CA C sing N N 342 PRO CA CB sing N N 343 PRO CA HA sing N N 344 PRO C O doub N N 345 PRO C OXT sing N N 346 PRO CB CG sing N N 347 PRO CB HB2 sing N N 348 PRO CB HB3 sing N N 349 PRO CG CD sing N N 350 PRO CG HG2 sing N N 351 PRO CG HG3 sing N N 352 PRO CD HD2 sing N N 353 PRO CD HD3 sing N N 354 PRO OXT HXT sing N N 355 SER N CA sing N N 356 SER N H sing N N 357 SER N H2 sing N N 358 SER CA C sing N N 359 SER CA CB sing N N 360 SER CA HA sing N N 361 SER C O doub N N 362 SER C OXT sing N N 363 SER CB OG sing N N 364 SER CB HB2 sing N N 365 SER CB HB3 sing N N 366 SER OG HG sing N N 367 SER OXT HXT sing N N 368 THR N CA sing N N 369 THR N H sing N N 370 THR N H2 sing N N 371 THR CA C sing N N 372 THR CA CB sing N N 373 THR CA HA sing N N 374 THR C O doub N N 375 THR C OXT sing N N 376 THR CB OG1 sing N N 377 THR CB CG2 sing N N 378 THR CB HB sing N N 379 THR OG1 HG1 sing N N 380 THR CG2 HG21 sing N N 381 THR CG2 HG22 sing N N 382 THR CG2 HG23 sing N N 383 THR OXT HXT sing N N 384 TRP N CA sing N N 385 TRP N H sing N N 386 TRP N H2 sing N N 387 TRP CA C sing N N 388 TRP CA CB sing N N 389 TRP CA HA sing N N 390 TRP C O doub N N 391 TRP C OXT sing N N 392 TRP CB CG sing N N 393 TRP CB HB2 sing N N 394 TRP CB HB3 sing N N 395 TRP CG CD1 doub Y N 396 TRP CG CD2 sing Y N 397 TRP CD1 NE1 sing Y N 398 TRP CD1 HD1 sing N N 399 TRP CD2 CE2 doub Y N 400 TRP CD2 CE3 sing Y N 401 TRP NE1 CE2 sing Y N 402 TRP NE1 HE1 sing N N 403 TRP CE2 CZ2 sing Y N 404 TRP CE3 CZ3 doub Y N 405 TRP CE3 HE3 sing N N 406 TRP CZ2 CH2 doub Y N 407 TRP CZ2 HZ2 sing N N 408 TRP CZ3 CH2 sing Y N 409 TRP CZ3 HZ3 sing N N 410 TRP CH2 HH2 sing N N 411 TRP OXT HXT sing N N 412 TYR N CA sing N N 413 TYR N H sing N N 414 TYR N H2 sing N N 415 TYR CA C sing N N 416 TYR CA CB sing N N 417 TYR CA HA sing N N 418 TYR C O doub N N 419 TYR C OXT sing N N 420 TYR CB CG sing N N 421 TYR CB HB2 sing N N 422 TYR CB HB3 sing N N 423 TYR CG CD1 doub Y N 424 TYR CG CD2 sing Y N 425 TYR CD1 CE1 sing Y N 426 TYR CD1 HD1 sing N N 427 TYR CD2 CE2 doub Y N 428 TYR CD2 HD2 sing N N 429 TYR CE1 CZ doub Y N 430 TYR CE1 HE1 sing N N 431 TYR CE2 CZ sing Y N 432 TYR CE2 HE2 sing N N 433 TYR CZ OH sing N N 434 TYR OH HH sing N N 435 TYR OXT HXT sing N N 436 VAL N CA sing N N 437 VAL N H sing N N 438 VAL N H2 sing N N 439 VAL CA C sing N N 440 VAL CA CB sing N N 441 VAL CA HA sing N N 442 VAL C O doub N N 443 VAL C OXT sing N N 444 VAL CB CG1 sing N N 445 VAL CB CG2 sing N N 446 VAL CB HB sing N N 447 VAL CG1 HG11 sing N N 448 VAL CG1 HG12 sing N N 449 VAL CG1 HG13 sing N N 450 VAL CG2 HG21 sing N N 451 VAL CG2 HG22 sing N N 452 VAL CG2 HG23 sing N N 453 VAL OXT HXT sing N N 454 # _atom_sites.entry_id 4NY9 _atom_sites.fract_transf_matrix[1][1] 0.010898 _atom_sites.fract_transf_matrix[1][2] -0.000000 _atom_sites.fract_transf_matrix[1][3] -0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010898 _atom_sites.fract_transf_matrix[2][3] -0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011675 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S # loop_