data_4NYQ # _entry.id 4NYQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NYQ pdb_00004nyq 10.2210/pdb4nyq/pdb RCSB RCSB083823 ? ? WWPDB D_1000083823 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4NYR . unspecified PDB 4NYS . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4NYQ _pdbx_database_status.recvd_initial_deposition_date 2013-12-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Coussens, N.P.' 1 'Gallat, F.-X.' 2 'Ramaswamy, S.' 3 'Yagi, K.' 4 'Tobe, S.S.' 5 'Stay, B.' 6 'Chavas, L.M.G.' 7 # _citation.id primary _citation.title ;Structure of a heterogeneous, glycosylated, lipid-bound, in vivo-grown protein crystal at atomic resolution from the viviparous cockroach Diploptera punctata. ; _citation.journal_abbrev Iucrj _citation.journal_volume 3 _citation.page_first 282 _citation.page_last 293 _citation.year 2016 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2052-2525 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27437115 _citation.pdbx_database_id_DOI 10.1107/S2052252516008903 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Banerjee, S.' 1 ? primary 'Coussens, N.P.' 2 ? primary 'Gallat, F.X.' 3 ? primary 'Sathyanarayanan, N.' 4 ? primary 'Srikanth, J.' 5 ? primary 'Yagi, K.J.' 6 ? primary 'Gray, J.S.' 7 ? primary 'Tobe, S.S.' 8 ? primary 'Stay, B.' 9 ? primary 'Chavas, L.M.' 10 ? primary 'Ramaswamy, S.' 11 ? # _cell.entry_id 4NYQ _cell.length_a 32.333 _cell.length_b 33.280 _cell.length_c 40.136 _cell.angle_alpha 99.07 _cell.angle_beta 100.17 _cell.angle_gamma 103.70 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NYQ _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Milk protein' 18749.201 1 ? ? ? ? 2 branched man 'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? 3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 non-polymer syn 'OLEIC ACID' 282.461 1 ? ? ? ? 6 non-polymer syn 'LINOLEIC ACID' 280.445 1 ? ? ? ? 7 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 8 water nat water 18.015 214 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Lili-Mip # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IAAILVANAKEPCPPENLQLTPRALVGKWYLRTTSPDIFKQVSNITEFYSAHGNDYYGTVTDYSPEYGLEAHRVNLTVSG RTLKFYMNDTHEYDSKYEILAVDKDYFIFYGHPPAAPSGLALIHYRQSCPKEDVIKRVKKALKNVCLDYKYFGNDTSVPC HYVE ; _entity_poly.pdbx_seq_one_letter_code_can ;IAAILVANAKEPCPPENLQLTPRALVGKWYLRTTSPDIFKQVSNITEFYSAHGNDYYGTVTDYSPEYGLEAHRVNLTVSG RTLKFYMNDTHEYDSKYEILAVDKDYFIFYGHPPAAPSGLALIHYRQSCPKEDVIKRVKKALKNVCLDYKYFGNDTSVPC HYVE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 ALA n 1 3 ALA n 1 4 ILE n 1 5 LEU n 1 6 VAL n 1 7 ALA n 1 8 ASN n 1 9 ALA n 1 10 LYS n 1 11 GLU n 1 12 PRO n 1 13 CYS n 1 14 PRO n 1 15 PRO n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 GLN n 1 20 LEU n 1 21 THR n 1 22 PRO n 1 23 ARG n 1 24 ALA n 1 25 LEU n 1 26 VAL n 1 27 GLY n 1 28 LYS n 1 29 TRP n 1 30 TYR n 1 31 LEU n 1 32 ARG n 1 33 THR n 1 34 THR n 1 35 SER n 1 36 PRO n 1 37 ASP n 1 38 ILE n 1 39 PHE n 1 40 LYS n 1 41 GLN n 1 42 VAL n 1 43 SER n 1 44 ASN n 1 45 ILE n 1 46 THR n 1 47 GLU n 1 48 PHE n 1 49 TYR n 1 50 SER n 1 51 ALA n 1 52 HIS n 1 53 GLY n 1 54 ASN n 1 55 ASP n 1 56 TYR n 1 57 TYR n 1 58 GLY n 1 59 THR n 1 60 VAL n 1 61 THR n 1 62 ASP n 1 63 TYR n 1 64 SER n 1 65 PRO n 1 66 GLU n 1 67 TYR n 1 68 GLY n 1 69 LEU n 1 70 GLU n 1 71 ALA n 1 72 HIS n 1 73 ARG n 1 74 VAL n 1 75 ASN n 1 76 LEU n 1 77 THR n 1 78 VAL n 1 79 SER n 1 80 GLY n 1 81 ARG n 1 82 THR n 1 83 LEU n 1 84 LYS n 1 85 PHE n 1 86 TYR n 1 87 MET n 1 88 ASN n 1 89 ASP n 1 90 THR n 1 91 HIS n 1 92 GLU n 1 93 TYR n 1 94 ASP n 1 95 SER n 1 96 LYS n 1 97 TYR n 1 98 GLU n 1 99 ILE n 1 100 LEU n 1 101 ALA n 1 102 VAL n 1 103 ASP n 1 104 LYS n 1 105 ASP n 1 106 TYR n 1 107 PHE n 1 108 ILE n 1 109 PHE n 1 110 TYR n 1 111 GLY n 1 112 HIS n 1 113 PRO n 1 114 PRO n 1 115 ALA n 1 116 ALA n 1 117 PRO n 1 118 SER n 1 119 GLY n 1 120 LEU n 1 121 ALA n 1 122 LEU n 1 123 ILE n 1 124 HIS n 1 125 TYR n 1 126 ARG n 1 127 GLN n 1 128 SER n 1 129 CYS n 1 130 PRO n 1 131 LYS n 1 132 GLU n 1 133 ASP n 1 134 VAL n 1 135 ILE n 1 136 LYS n 1 137 ARG n 1 138 VAL n 1 139 LYS n 1 140 LYS n 1 141 ALA n 1 142 LEU n 1 143 LYS n 1 144 ASN n 1 145 VAL n 1 146 CYS n 1 147 LEU n 1 148 ASP n 1 149 TYR n 1 150 LYS n 1 151 TYR n 1 152 PHE n 1 153 GLY n 1 154 ASN n 1 155 ASP n 1 156 THR n 1 157 SER n 1 158 VAL n 1 159 PRO n 1 160 CYS n 1 161 HIS n 1 162 TYR n 1 163 VAL n 1 164 GLU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'Pacific beetle cockroach' _entity_src_nat.pdbx_organism_scientific 'Diploptera punctata' _entity_src_nat.pdbx_ncbi_taxonomy_id 6984 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6SVB6_DIPPU _struct_ref.pdbx_db_accession Q6SVB6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IAAILVANAKEPCPPENLQLTPRALVGKWYLRTTSPDIFKQVSNITEFYSAHGNDYYGTVTDYSPEYGLEAHRVNLTVSG RTLKFYMNDTHEYDSKYEILAVDKDYFIFYGHPPAAPSGLALIHYRQSCPKEDVIKRVKKALKNVCLDYKYFGNDTSVPC HYVE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4NYQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 164 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6SVB6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 164 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -8 _struct_ref_seq.pdbx_auth_seq_align_end 155 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EIC non-polymer . 'LINOLEIC ACID' '9,12-LINOLEIC ACID' 'C18 H32 O2' 280.445 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 OLA non-polymer . 'OLEIC ACID' ? 'C18 H34 O2' 282.461 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4NYQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 42.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'In-vivo crystallization' _exptl_crystal_grow.temp 300 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'Spontaneous crystallization inside the midguts of a living viviparous cockroach, pH 6.0, In-vivo crystallization, temperature 300K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 70 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 130 mm' _diffrn_detector.pdbx_collection_date 2005-05-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8349 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8349 # _reflns.entry_id 4NYQ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 27.45 _reflns.d_resolution_high 1.2 _reflns.number_obs 46801 _reflns.number_all 46801 _reflns.percent_possible_obs 95.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.20 _reflns_shell.d_res_low 1.23 _reflns_shell.percent_possible_all 93.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4NYQ _refine.ls_number_reflns_obs 44442 _refine.ls_number_reflns_all 46801 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.45 _refine.ls_d_res_high 1.20 _refine.ls_percent_reflns_obs 95.55 _refine.ls_R_factor_obs 0.14562 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14330 _refine.ls_R_factor_R_free 0.19191 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2334 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.980 _refine.correlation_coeff_Fo_to_Fc_free 0.966 _refine.B_iso_mean 19.505 _refine.aniso_B[1][1] -0.49 _refine.aniso_B[2][2] 0.05 _refine.aniso_B[3][3] 0.48 _refine.aniso_B[1][2] -0.33 _refine.aniso_B[1][3] 0.09 _refine.aniso_B[2][3] -0.30 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 4NYR _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.042 _refine.pdbx_overall_ESU_R_Free 0.046 _refine.overall_SU_ML 0.034 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.739 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1248 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 133 _refine_hist.number_atoms_solvent 214 _refine_hist.number_atoms_total 1595 _refine_hist.d_res_high 1.20 _refine_hist.d_res_low 27.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.013 0.019 ? 1484 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 1371 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.740 2.051 ? 2017 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.957 3.003 ? 3158 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.895 5.000 ? 164 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 33.604 23.594 ? 64 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 11.594 15.000 ? 216 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 22.504 15.000 ? 6 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.127 0.200 ? 222 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.009 0.021 ? 1587 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.002 0.020 ? 329 ? 'X-RAY DIFFRACTION' r_mcbond_it 1.911 1.295 ? 638 ? 'X-RAY DIFFRACTION' r_mcbond_other 1.872 1.291 ? 637 ? 'X-RAY DIFFRACTION' r_mcangle_it 2.508 1.954 ? 805 ? 'X-RAY DIFFRACTION' r_mcangle_other 2.530 1.957 ? 806 ? 'X-RAY DIFFRACTION' r_scbond_it 4.371 1.988 ? 846 ? 'X-RAY DIFFRACTION' r_scbond_other 4.370 1.988 ? 846 ? 'X-RAY DIFFRACTION' r_scangle_other 5.298 2.766 ? 1212 ? 'X-RAY DIFFRACTION' r_long_range_B_refined 9.022 15.281 ? 1809 ? 'X-RAY DIFFRACTION' r_long_range_B_other 7.435 13.619 ? 1691 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 3.074 3.000 ? 2855 ? 'X-RAY DIFFRACTION' r_sphericity_free 73.607 5.000 ? 51 ? 'X-RAY DIFFRACTION' r_sphericity_bonded 20.944 5.000 ? 2969 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.200 _refine_ls_shell.d_res_low 1.231 _refine_ls_shell.number_reflns_R_work 3258 _refine_ls_shell.R_factor_R_work 0.232 _refine_ls_shell.percent_reflns_obs 93.90 _refine_ls_shell.R_factor_R_free 0.306 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 177 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4NYQ _struct.title ;In-vivo crystallisation (midguts of a viviparous cockroach) and structure at 1.2 A resolution of a glycosylated, lipid-binding, lipocalin-like protein ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NYQ _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN' _struct_keywords.text 'In-vivo crystallization, cockroach, SAD phasing, lipocalin, Lipocalin fold, Fatty acid binding protein, LIPID BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 131 ? VAL A 145 ? LYS A 122 VAL A 136 1 ? 15 HELX_P HELX_P2 2 ASP A 148 ? PHE A 152 ? ASP A 139 PHE A 143 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 13 SG ? ? ? 1_555 A CYS 146 SG ? ? A CYS 4 A CYS 137 1_555 ? ? ? ? ? ? ? 2.057 ? ? disulf2 disulf ? ? A CYS 129 SG ? ? ? 1_555 A CYS 160 SG ? ? A CYS 120 A CYS 151 1_555 ? ? ? ? ? ? ? 2.006 ? ? covale1 covale one ? A ASN 44 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 35 B NAG 1 1_555 ? ? ? ? ? ? ? 1.486 ? N-Glycosylation covale2 covale one ? A ASN 88 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 79 C NAG 1 1_555 ? ? ? ? ? ? ? 1.458 ? N-Glycosylation covale3 covale one ? A ASN 154 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 145 A NAG 206 1_555 ? ? ? ? ? ? ? 1.462 ? N-Glycosylation covale4 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.423 ? ? covale5 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.401 ? ? covale6 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.455 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 35 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 26 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 36 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 27 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -7.26 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 153 ? ASN A 154 ? GLY A 144 ASN A 145 A 2 GLY A 27 ? SER A 35 ? GLY A 18 SER A 26 A 3 LEU A 120 ? TYR A 125 ? LEU A 111 TYR A 116 A 4 TYR A 106 ? GLY A 111 ? TYR A 97 GLY A 102 A 5 SER A 95 ? VAL A 102 ? SER A 86 VAL A 93 A 6 THR A 82 ? MET A 87 ? THR A 73 MET A 78 A 7 GLY A 68 ? SER A 79 ? GLY A 59 SER A 70 A 8 ASP A 55 ? SER A 64 ? ASP A 46 SER A 55 A 9 SER A 43 ? HIS A 52 ? SER A 34 HIS A 43 A 10 GLY A 27 ? SER A 35 ? GLY A 18 SER A 26 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 153 ? O GLY A 144 N THR A 34 ? N THR A 25 A 2 3 N THR A 33 ? N THR A 24 O ILE A 123 ? O ILE A 114 A 3 4 O HIS A 124 ? O HIS A 115 N PHE A 107 ? N PHE A 98 A 4 5 O ILE A 108 ? O ILE A 99 N LEU A 100 ? N LEU A 91 A 5 6 O TYR A 97 ? O TYR A 88 N LEU A 83 ? N LEU A 74 A 6 7 O THR A 82 ? O THR A 73 N SER A 79 ? N SER A 70 A 7 8 O LEU A 76 ? O LEU A 67 N TYR A 56 ? N TYR A 47 A 8 9 O TYR A 63 ? O TYR A 54 N SER A 43 ? N SER A 34 A 9 10 O GLU A 47 ? O GLU A 38 N TRP A 29 ? N TRP A 20 # _database_PDB_matrix.entry_id 4NYQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4NYQ _atom_sites.fract_transf_matrix[1][1] 0.030929 _atom_sites.fract_transf_matrix[1][2] 0.007541 _atom_sites.fract_transf_matrix[1][3] 0.007282 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.030928 _atom_sites.fract_transf_matrix[2][3] 0.006598 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025883 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 -8 ? ? ? A . n A 1 2 ALA 2 -7 ? ? ? A . n A 1 3 ALA 3 -6 ? ? ? A . n A 1 4 ILE 4 -5 ? ? ? A . n A 1 5 LEU 5 -4 ? ? ? A . n A 1 6 VAL 6 -3 ? ? ? A . n A 1 7 ALA 7 -2 ? ? ? A . n A 1 8 ASN 8 -1 ? ? ? A . n A 1 9 ALA 9 0 ? ? ? A . n A 1 10 LYS 10 1 1 LYS LYS A . n A 1 11 GLU 11 2 2 GLU GLU A . n A 1 12 PRO 12 3 3 PRO PRO A . n A 1 13 CYS 13 4 4 CYS CYS A . n A 1 14 PRO 14 5 5 PRO PRO A . n A 1 15 PRO 15 6 6 PRO PRO A . n A 1 16 GLU 16 7 7 GLU GLU A . n A 1 17 ASN 17 8 8 ASN ASN A . n A 1 18 LEU 18 9 9 LEU LEU A . n A 1 19 GLN 19 10 10 GLN GLN A . n A 1 20 LEU 20 11 11 LEU LEU A . n A 1 21 THR 21 12 12 THR THR A . n A 1 22 PRO 22 13 13 PRO PRO A . n A 1 23 ARG 23 14 14 ARG ARG A . n A 1 24 ALA 24 15 15 ALA ALA A . n A 1 25 LEU 25 16 16 LEU LEU A . n A 1 26 VAL 26 17 17 VAL VAL A . n A 1 27 GLY 27 18 18 GLY GLY A . n A 1 28 LYS 28 19 19 LYS LYS A . n A 1 29 TRP 29 20 20 TRP TRP A . n A 1 30 TYR 30 21 21 TYR TYR A . n A 1 31 LEU 31 22 22 LEU LEU A . n A 1 32 ARG 32 23 23 ARG ARG A . n A 1 33 THR 33 24 24 THR THR A . n A 1 34 THR 34 25 25 THR THR A . n A 1 35 SER 35 26 26 SER SER A . n A 1 36 PRO 36 27 27 PRO PRO A . n A 1 37 ASP 37 28 28 ASP ASP A . n A 1 38 ILE 38 29 29 ILE ILE A . n A 1 39 PHE 39 30 30 PHE PHE A . n A 1 40 LYS 40 31 31 LYS LYS A . n A 1 41 GLN 41 32 32 GLN GLN A . n A 1 42 VAL 42 33 33 VAL VAL A . n A 1 43 SER 43 34 34 SER SER A . n A 1 44 ASN 44 35 35 ASN ASN A . n A 1 45 ILE 45 36 36 ILE ILE A . n A 1 46 THR 46 37 37 THR THR A . n A 1 47 GLU 47 38 38 GLU GLU A . n A 1 48 PHE 48 39 39 PHE PHE A . n A 1 49 TYR 49 40 40 TYR TYR A . n A 1 50 SER 50 41 41 SER SER A . n A 1 51 ALA 51 42 42 ALA ALA A . n A 1 52 HIS 52 43 43 HIS HIS A . n A 1 53 GLY 53 44 44 GLY GLY A . n A 1 54 ASN 54 45 45 ASN ASN A . n A 1 55 ASP 55 46 46 ASP ASP A . n A 1 56 TYR 56 47 47 TYR TYR A . n A 1 57 TYR 57 48 48 TYR TYR A . n A 1 58 GLY 58 49 49 GLY GLY A . n A 1 59 THR 59 50 50 THR THR A . n A 1 60 VAL 60 51 51 VAL VAL A . n A 1 61 THR 61 52 52 THR THR A . n A 1 62 ASP 62 53 53 ASP ASP A . n A 1 63 TYR 63 54 54 TYR TYR A . n A 1 64 SER 64 55 55 SER SER A . n A 1 65 PRO 65 56 56 PRO PRO A . n A 1 66 GLU 66 57 57 GLU GLU A . n A 1 67 TYR 67 58 58 TYR TYR A . n A 1 68 GLY 68 59 59 GLY GLY A . n A 1 69 LEU 69 60 60 LEU LEU A . n A 1 70 GLU 70 61 61 GLU GLU A . n A 1 71 ALA 71 62 62 ALA ALA A . n A 1 72 HIS 72 63 63 HIS HIS A . n A 1 73 ARG 73 64 64 ARG ARG A . n A 1 74 VAL 74 65 65 VAL VAL A . n A 1 75 ASN 75 66 66 ASN ASN A . n A 1 76 LEU 76 67 67 LEU LEU A . n A 1 77 THR 77 68 68 THR THR A . n A 1 78 VAL 78 69 69 VAL VAL A . n A 1 79 SER 79 70 70 SER SER A . n A 1 80 GLY 80 71 71 GLY GLY A . n A 1 81 ARG 81 72 72 ARG ARG A . n A 1 82 THR 82 73 73 THR THR A . n A 1 83 LEU 83 74 74 LEU LEU A . n A 1 84 LYS 84 75 75 LYS LYS A . n A 1 85 PHE 85 76 76 PHE PHE A . n A 1 86 TYR 86 77 77 TYR TYR A . n A 1 87 MET 87 78 78 MET MET A . n A 1 88 ASN 88 79 79 ASN ASN A . n A 1 89 ASP 89 80 80 ASP ASP A . n A 1 90 THR 90 81 81 THR THR A . n A 1 91 HIS 91 82 82 HIS HIS A . n A 1 92 GLU 92 83 83 GLU GLU A . n A 1 93 TYR 93 84 84 TYR TYR A . n A 1 94 ASP 94 85 85 ASP ASP A . n A 1 95 SER 95 86 86 SER SER A . n A 1 96 LYS 96 87 87 LYS LYS A . n A 1 97 TYR 97 88 88 TYR TYR A . n A 1 98 GLU 98 89 89 GLU GLU A . n A 1 99 ILE 99 90 90 ILE ILE A . n A 1 100 LEU 100 91 91 LEU LEU A . n A 1 101 ALA 101 92 92 ALA ALA A . n A 1 102 VAL 102 93 93 VAL VAL A . n A 1 103 ASP 103 94 94 ASP ASP A . n A 1 104 LYS 104 95 95 LYS LYS A . n A 1 105 ASP 105 96 96 ASP ASP A . n A 1 106 TYR 106 97 97 TYR TYR A . n A 1 107 PHE 107 98 98 PHE PHE A . n A 1 108 ILE 108 99 99 ILE ILE A . n A 1 109 PHE 109 100 100 PHE PHE A . n A 1 110 TYR 110 101 101 TYR TYR A . n A 1 111 GLY 111 102 102 GLY GLY A . n A 1 112 HIS 112 103 103 HIS HIS A . n A 1 113 PRO 113 104 104 PRO PRO A . n A 1 114 PRO 114 105 105 PRO PRO A . n A 1 115 ALA 115 106 106 ALA ALA A . n A 1 116 ALA 116 107 107 ALA ALA A . n A 1 117 PRO 117 108 108 PRO PRO A . n A 1 118 SER 118 109 109 SER SER A . n A 1 119 GLY 119 110 110 GLY GLY A . n A 1 120 LEU 120 111 111 LEU LEU A . n A 1 121 ALA 121 112 112 ALA ALA A . n A 1 122 LEU 122 113 113 LEU LEU A . n A 1 123 ILE 123 114 114 ILE ILE A . n A 1 124 HIS 124 115 115 HIS HIS A . n A 1 125 TYR 125 116 116 TYR TYR A . n A 1 126 ARG 126 117 117 ARG ARG A . n A 1 127 GLN 127 118 118 GLN GLN A . n A 1 128 SER 128 119 119 SER SER A . n A 1 129 CYS 129 120 120 CYS CYS A . n A 1 130 PRO 130 121 121 PRO PRO A . n A 1 131 LYS 131 122 122 LYS LYS A . n A 1 132 GLU 132 123 123 GLU GLU A . n A 1 133 ASP 133 124 124 ASP ASP A . n A 1 134 VAL 134 125 125 VAL VAL A . n A 1 135 ILE 135 126 126 ILE ILE A . n A 1 136 LYS 136 127 127 LYS LYS A . n A 1 137 ARG 137 128 128 ARG ARG A . n A 1 138 VAL 138 129 129 VAL VAL A . n A 1 139 LYS 139 130 130 LYS LYS A . n A 1 140 LYS 140 131 131 LYS LYS A . n A 1 141 ALA 141 132 132 ALA ALA A . n A 1 142 LEU 142 133 133 LEU LEU A . n A 1 143 LYS 143 134 134 LYS LYS A . n A 1 144 ASN 144 135 135 ASN ASN A . n A 1 145 VAL 145 136 136 VAL VAL A . n A 1 146 CYS 146 137 137 CYS CYS A . n A 1 147 LEU 147 138 138 LEU LEU A . n A 1 148 ASP 148 139 139 ASP ASP A . n A 1 149 TYR 149 140 140 TYR TYR A . n A 1 150 LYS 150 141 141 LYS LYS A . n A 1 151 TYR 151 142 142 TYR TYR A . n A 1 152 PHE 152 143 143 PHE PHE A . n A 1 153 GLY 153 144 144 GLY GLY A . n A 1 154 ASN 154 145 145 ASN ASN A . n A 1 155 ASP 155 146 146 ASP ASP A . n A 1 156 THR 156 147 147 THR THR A . n A 1 157 SER 157 148 148 SER SER A . n A 1 158 VAL 158 149 149 VAL VAL A . n A 1 159 PRO 159 150 150 PRO PRO A . n A 1 160 CYS 160 151 151 CYS CYS A . n A 1 161 HIS 161 152 152 HIS HIS A . n A 1 162 TYR 162 153 153 TYR TYR A . n A 1 163 VAL 163 154 ? ? ? A . n A 1 164 GLU 164 155 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 206 160 NAG NAG A . E 5 OLA 1 207 1 OLA OLA A . F 6 EIC 1 208 1 EIC EIC A . G 7 GOL 1 209 1 GOL GOL A . H 7 GOL 1 210 2 GOL GOL A . I 8 HOH 1 301 1 HOH HOH A . I 8 HOH 2 302 2 HOH HOH A . I 8 HOH 3 303 3 HOH HOH A . I 8 HOH 4 304 4 HOH HOH A . I 8 HOH 5 305 5 HOH HOH A . I 8 HOH 6 306 6 HOH HOH A . I 8 HOH 7 307 7 HOH HOH A . I 8 HOH 8 308 8 HOH HOH A . I 8 HOH 9 309 9 HOH HOH A . I 8 HOH 10 310 10 HOH HOH A . I 8 HOH 11 311 11 HOH HOH A . I 8 HOH 12 312 12 HOH HOH A . I 8 HOH 13 313 14 HOH HOH A . I 8 HOH 14 314 15 HOH HOH A . I 8 HOH 15 315 16 HOH HOH A . I 8 HOH 16 316 17 HOH HOH A . I 8 HOH 17 317 18 HOH HOH A . I 8 HOH 18 318 19 HOH HOH A . I 8 HOH 19 319 20 HOH HOH A . I 8 HOH 20 320 21 HOH HOH A . I 8 HOH 21 321 22 HOH HOH A . I 8 HOH 22 322 23 HOH HOH A . I 8 HOH 23 323 24 HOH HOH A . I 8 HOH 24 324 25 HOH HOH A . I 8 HOH 25 325 27 HOH HOH A . I 8 HOH 26 326 28 HOH HOH A . I 8 HOH 27 327 29 HOH HOH A . I 8 HOH 28 328 30 HOH HOH A . I 8 HOH 29 329 31 HOH HOH A . I 8 HOH 30 330 32 HOH HOH A . I 8 HOH 31 331 33 HOH HOH A . I 8 HOH 32 332 34 HOH HOH A . I 8 HOH 33 333 35 HOH HOH A . I 8 HOH 34 334 36 HOH HOH A . I 8 HOH 35 335 37 HOH HOH A . I 8 HOH 36 336 38 HOH HOH A . I 8 HOH 37 337 39 HOH HOH A . I 8 HOH 38 338 40 HOH HOH A . I 8 HOH 39 339 41 HOH HOH A . I 8 HOH 40 340 42 HOH HOH A . I 8 HOH 41 341 43 HOH HOH A . I 8 HOH 42 342 44 HOH HOH A . I 8 HOH 43 343 45 HOH HOH A . I 8 HOH 44 344 46 HOH HOH A . I 8 HOH 45 345 47 HOH HOH A . I 8 HOH 46 346 48 HOH HOH A . I 8 HOH 47 347 49 HOH HOH A . I 8 HOH 48 348 50 HOH HOH A . I 8 HOH 49 349 51 HOH HOH A . I 8 HOH 50 350 52 HOH HOH A . I 8 HOH 51 351 53 HOH HOH A . I 8 HOH 52 352 54 HOH HOH A . I 8 HOH 53 353 55 HOH HOH A . I 8 HOH 54 354 56 HOH HOH A . I 8 HOH 55 355 57 HOH HOH A . I 8 HOH 56 356 58 HOH HOH A . I 8 HOH 57 357 59 HOH HOH A . I 8 HOH 58 358 60 HOH HOH A . I 8 HOH 59 359 61 HOH HOH A . I 8 HOH 60 360 62 HOH HOH A . I 8 HOH 61 361 63 HOH HOH A . I 8 HOH 62 362 64 HOH HOH A . I 8 HOH 63 363 65 HOH HOH A . I 8 HOH 64 364 66 HOH HOH A . I 8 HOH 65 365 67 HOH HOH A . I 8 HOH 66 366 69 HOH HOH A . I 8 HOH 67 367 70 HOH HOH A . I 8 HOH 68 368 71 HOH HOH A . I 8 HOH 69 369 73 HOH HOH A . I 8 HOH 70 370 74 HOH HOH A . I 8 HOH 71 371 75 HOH HOH A . I 8 HOH 72 372 76 HOH HOH A . I 8 HOH 73 373 77 HOH HOH A . I 8 HOH 74 374 78 HOH HOH A . I 8 HOH 75 375 80 HOH HOH A . I 8 HOH 76 376 81 HOH HOH A . I 8 HOH 77 377 82 HOH HOH A . I 8 HOH 78 378 83 HOH HOH A . I 8 HOH 79 379 84 HOH HOH A . I 8 HOH 80 380 85 HOH HOH A . I 8 HOH 81 381 86 HOH HOH A . I 8 HOH 82 382 87 HOH HOH A . I 8 HOH 83 383 88 HOH HOH A . I 8 HOH 84 384 89 HOH HOH A . I 8 HOH 85 385 90 HOH HOH A . I 8 HOH 86 386 91 HOH HOH A . I 8 HOH 87 387 92 HOH HOH A . I 8 HOH 88 388 93 HOH HOH A . I 8 HOH 89 389 94 HOH HOH A . I 8 HOH 90 390 95 HOH HOH A . I 8 HOH 91 391 96 HOH HOH A . I 8 HOH 92 392 97 HOH HOH A . I 8 HOH 93 393 98 HOH HOH A . I 8 HOH 94 394 99 HOH HOH A . I 8 HOH 95 395 100 HOH HOH A . I 8 HOH 96 396 101 HOH HOH A . I 8 HOH 97 397 102 HOH HOH A . I 8 HOH 98 398 104 HOH HOH A . I 8 HOH 99 399 105 HOH HOH A . I 8 HOH 100 400 107 HOH HOH A . I 8 HOH 101 401 108 HOH HOH A . I 8 HOH 102 402 109 HOH HOH A . I 8 HOH 103 403 110 HOH HOH A . I 8 HOH 104 404 111 HOH HOH A . I 8 HOH 105 405 113 HOH HOH A . I 8 HOH 106 406 114 HOH HOH A . I 8 HOH 107 407 115 HOH HOH A . I 8 HOH 108 408 117 HOH HOH A . I 8 HOH 109 409 118 HOH HOH A . I 8 HOH 110 410 120 HOH HOH A . I 8 HOH 111 411 122 HOH HOH A . I 8 HOH 112 412 123 HOH HOH A . I 8 HOH 113 413 124 HOH HOH A . I 8 HOH 114 414 125 HOH HOH A . I 8 HOH 115 415 126 HOH HOH A . I 8 HOH 116 416 127 HOH HOH A . I 8 HOH 117 417 128 HOH HOH A . I 8 HOH 118 418 129 HOH HOH A . I 8 HOH 119 419 130 HOH HOH A . I 8 HOH 120 420 131 HOH HOH A . I 8 HOH 121 421 132 HOH HOH A . I 8 HOH 122 422 133 HOH HOH A . I 8 HOH 123 423 135 HOH HOH A . I 8 HOH 124 424 137 HOH HOH A . I 8 HOH 125 425 138 HOH HOH A . I 8 HOH 126 426 139 HOH HOH A . I 8 HOH 127 427 141 HOH HOH A . I 8 HOH 128 428 143 HOH HOH A . I 8 HOH 129 429 144 HOH HOH A . I 8 HOH 130 430 145 HOH HOH A . I 8 HOH 131 431 146 HOH HOH A . I 8 HOH 132 432 147 HOH HOH A . I 8 HOH 133 433 148 HOH HOH A . I 8 HOH 134 434 149 HOH HOH A . I 8 HOH 135 435 150 HOH HOH A . I 8 HOH 136 436 151 HOH HOH A . I 8 HOH 137 437 152 HOH HOH A . I 8 HOH 138 438 153 HOH HOH A . I 8 HOH 139 439 154 HOH HOH A . I 8 HOH 140 440 155 HOH HOH A . I 8 HOH 141 441 157 HOH HOH A . I 8 HOH 142 442 158 HOH HOH A . I 8 HOH 143 443 159 HOH HOH A . I 8 HOH 144 444 161 HOH HOH A . I 8 HOH 145 445 162 HOH HOH A . I 8 HOH 146 446 163 HOH HOH A . I 8 HOH 147 447 164 HOH HOH A . I 8 HOH 148 448 166 HOH HOH A . I 8 HOH 149 449 167 HOH HOH A . I 8 HOH 150 450 168 HOH HOH A . I 8 HOH 151 451 169 HOH HOH A . I 8 HOH 152 452 170 HOH HOH A . I 8 HOH 153 453 172 HOH HOH A . I 8 HOH 154 454 175 HOH HOH A . I 8 HOH 155 455 176 HOH HOH A . I 8 HOH 156 456 177 HOH HOH A . I 8 HOH 157 457 178 HOH HOH A . I 8 HOH 158 458 179 HOH HOH A . I 8 HOH 159 459 182 HOH HOH A . I 8 HOH 160 460 184 HOH HOH A . I 8 HOH 161 461 185 HOH HOH A . I 8 HOH 162 462 186 HOH HOH A . I 8 HOH 163 463 187 HOH HOH A . I 8 HOH 164 464 189 HOH HOH A . I 8 HOH 165 465 190 HOH HOH A . I 8 HOH 166 466 191 HOH HOH A . I 8 HOH 167 467 192 HOH HOH A . I 8 HOH 168 468 193 HOH HOH A . I 8 HOH 169 469 194 HOH HOH A . I 8 HOH 170 470 196 HOH HOH A . I 8 HOH 171 471 199 HOH HOH A . I 8 HOH 172 472 200 HOH HOH A . I 8 HOH 173 473 201 HOH HOH A . I 8 HOH 174 474 202 HOH HOH A . I 8 HOH 175 475 203 HOH HOH A . I 8 HOH 176 476 204 HOH HOH A . I 8 HOH 177 477 205 HOH HOH A . I 8 HOH 178 478 206 HOH HOH A . I 8 HOH 179 479 207 HOH HOH A . I 8 HOH 180 480 208 HOH HOH A . I 8 HOH 181 481 210 HOH HOH A . I 8 HOH 182 482 211 HOH HOH A . I 8 HOH 183 483 212 HOH HOH A . I 8 HOH 184 484 214 HOH HOH A . I 8 HOH 185 485 215 HOH HOH A . I 8 HOH 186 486 216 HOH HOH A . I 8 HOH 187 487 218 HOH HOH A . I 8 HOH 188 488 220 HOH HOH A . I 8 HOH 189 489 221 HOH HOH A . I 8 HOH 190 490 224 HOH HOH A . I 8 HOH 191 491 225 HOH HOH A . I 8 HOH 192 492 226 HOH HOH A . I 8 HOH 193 493 227 HOH HOH A . I 8 HOH 194 494 228 HOH HOH A . I 8 HOH 195 495 229 HOH HOH A . I 8 HOH 196 496 230 HOH HOH A . I 8 HOH 197 497 232 HOH HOH A . I 8 HOH 198 498 234 HOH HOH A . I 8 HOH 199 499 235 HOH HOH A . I 8 HOH 200 500 236 HOH HOH A . I 8 HOH 201 501 237 HOH HOH A . I 8 HOH 202 502 238 HOH HOH A . I 8 HOH 203 503 239 HOH HOH A . I 8 HOH 204 504 240 HOH HOH A . I 8 HOH 205 505 241 HOH HOH A . I 8 HOH 206 506 242 HOH HOH A . I 8 HOH 207 507 244 HOH HOH A . I 8 HOH 208 508 245 HOH HOH A . I 8 HOH 209 509 246 HOH HOH A . I 8 HOH 210 510 247 HOH HOH A . I 8 HOH 211 511 248 HOH HOH A . I 8 HOH 212 512 249 HOH HOH A . I 8 HOH 213 513 250 HOH HOH A . I 8 HOH 214 514 252 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 88 A ASN 79 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 154 A ASN 145 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 44 A ASN 35 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-01-01 2 'Structure model' 1 1 2016-07-20 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2020-01-01 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Atomic model' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Database references' 11 6 'Structure model' 'Refinement description' 12 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' citation 3 4 'Structure model' citation_author 4 4 'Structure model' struct_conn 5 5 'Structure model' atom_site 6 5 'Structure model' atom_site_anisotrop 7 5 'Structure model' chem_comp 8 5 'Structure model' entity 9 5 'Structure model' pdbx_branch_scheme 10 5 'Structure model' pdbx_chem_comp_identifier 11 5 'Structure model' pdbx_entity_branch 12 5 'Structure model' pdbx_entity_branch_descriptor 13 5 'Structure model' pdbx_entity_branch_link 14 5 'Structure model' pdbx_entity_branch_list 15 5 'Structure model' pdbx_entity_nonpoly 16 5 'Structure model' pdbx_nonpoly_scheme 17 5 'Structure model' pdbx_struct_assembly_gen 18 5 'Structure model' struct_asym 19 5 'Structure model' struct_conn 20 5 'Structure model' struct_site 21 5 'Structure model' struct_site_gen 22 6 'Structure model' chem_comp 23 6 'Structure model' chem_comp_atom 24 6 'Structure model' chem_comp_bond 25 6 'Structure model' database_2 26 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_abbrev' 2 4 'Structure model' '_citation.pdbx_database_id_PubMed' 3 4 'Structure model' '_citation.title' 4 4 'Structure model' '_citation_author.name' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 5 'Structure model' '_atom_site.auth_asym_id' 7 5 'Structure model' '_atom_site.auth_seq_id' 8 5 'Structure model' '_atom_site.label_asym_id' 9 5 'Structure model' '_atom_site.label_entity_id' 10 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 11 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 12 5 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 13 5 'Structure model' '_chem_comp.name' 14 5 'Structure model' '_chem_comp.type' 15 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 16 5 'Structure model' '_struct_conn.pdbx_dist_value' 17 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 5 'Structure model' '_struct_conn.pdbx_role' 19 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 6 'Structure model' '_chem_comp.pdbx_synonyms' 32 6 'Structure model' '_database_2.pdbx_DOI' 33 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SOLVE phasing . ? 1 REFMAC refinement 5.7.0032 ? 2 d*TREK 'data reduction' . ? 3 d*TREK 'data scaling' . ? 4 # _pdbx_entry_details.entry_id 4NYQ _pdbx_entry_details.nonpolymer_details 'OLA A 207 AND EIC A 208 ARE IN ALTERNATE CONFORMATIONS.' _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 107 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -155.38 _pdbx_validate_torsion.psi 73.46 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE -8 ? A ILE 1 2 1 Y 1 A ALA -7 ? A ALA 2 3 1 Y 1 A ALA -6 ? A ALA 3 4 1 Y 1 A ILE -5 ? A ILE 4 5 1 Y 1 A LEU -4 ? A LEU 5 6 1 Y 1 A VAL -3 ? A VAL 6 7 1 Y 1 A ALA -2 ? A ALA 7 8 1 Y 1 A ASN -1 ? A ASN 8 9 1 Y 1 A ALA 0 ? A ALA 9 10 1 Y 1 A VAL 154 ? A VAL 163 11 1 Y 1 A GLU 155 ? A GLU 164 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 EIC C1 C N N 112 EIC C2 C N N 113 EIC C3 C N N 114 EIC C4 C N N 115 EIC C5 C N N 116 EIC C6 C N N 117 EIC C7 C N N 118 EIC C8 C N N 119 EIC C9 C N N 120 EIC C10 C N N 121 EIC C11 C N N 122 EIC C12 C N N 123 EIC C13 C N N 124 EIC C14 C N N 125 EIC C15 C N N 126 EIC C16 C N N 127 EIC C17 C N N 128 EIC C18 C N N 129 EIC O1 O N N 130 EIC O2 O N N 131 EIC H21 H N N 132 EIC H22 H N N 133 EIC H31 H N N 134 EIC H32 H N N 135 EIC H41 H N N 136 EIC H42 H N N 137 EIC H51 H N N 138 EIC H52 H N N 139 EIC H61 H N N 140 EIC H62 H N N 141 EIC H71 H N N 142 EIC H72 H N N 143 EIC H81 H N N 144 EIC H82 H N N 145 EIC H91 H N N 146 EIC H1O1 H N N 147 EIC H111 H N N 148 EIC H112 H N N 149 EIC H121 H N N 150 EIC H131 H N N 151 EIC H141 H N N 152 EIC H142 H N N 153 EIC H151 H N N 154 EIC H152 H N N 155 EIC H161 H N N 156 EIC H162 H N N 157 EIC H171 H N N 158 EIC H172 H N N 159 EIC H181 H N N 160 EIC H182 H N N 161 EIC H183 H N N 162 EIC HO2 H N N 163 GLN N N N N 164 GLN CA C N S 165 GLN C C N N 166 GLN O O N N 167 GLN CB C N N 168 GLN CG C N N 169 GLN CD C N N 170 GLN OE1 O N N 171 GLN NE2 N N N 172 GLN OXT O N N 173 GLN H H N N 174 GLN H2 H N N 175 GLN HA H N N 176 GLN HB2 H N N 177 GLN HB3 H N N 178 GLN HG2 H N N 179 GLN HG3 H N N 180 GLN HE21 H N N 181 GLN HE22 H N N 182 GLN HXT H N N 183 GLU N N N N 184 GLU CA C N S 185 GLU C C N N 186 GLU O O N N 187 GLU CB C N N 188 GLU CG C N N 189 GLU CD C N N 190 GLU OE1 O N N 191 GLU OE2 O N N 192 GLU OXT O N N 193 GLU H H N N 194 GLU H2 H N N 195 GLU HA H N N 196 GLU HB2 H N N 197 GLU HB3 H N N 198 GLU HG2 H N N 199 GLU HG3 H N N 200 GLU HE2 H N N 201 GLU HXT H N N 202 GLY N N N N 203 GLY CA C N N 204 GLY C C N N 205 GLY O O N N 206 GLY OXT O N N 207 GLY H H N N 208 GLY H2 H N N 209 GLY HA2 H N N 210 GLY HA3 H N N 211 GLY HXT H N N 212 GOL C1 C N N 213 GOL O1 O N N 214 GOL C2 C N N 215 GOL O2 O N N 216 GOL C3 C N N 217 GOL O3 O N N 218 GOL H11 H N N 219 GOL H12 H N N 220 GOL HO1 H N N 221 GOL H2 H N N 222 GOL HO2 H N N 223 GOL H31 H N N 224 GOL H32 H N N 225 GOL HO3 H N N 226 HIS N N N N 227 HIS CA C N S 228 HIS C C N N 229 HIS O O N N 230 HIS CB C N N 231 HIS CG C Y N 232 HIS ND1 N Y N 233 HIS CD2 C Y N 234 HIS CE1 C Y N 235 HIS NE2 N Y N 236 HIS OXT O N N 237 HIS H H N N 238 HIS H2 H N N 239 HIS HA H N N 240 HIS HB2 H N N 241 HIS HB3 H N N 242 HIS HD1 H N N 243 HIS HD2 H N N 244 HIS HE1 H N N 245 HIS HE2 H N N 246 HIS HXT H N N 247 HOH O O N N 248 HOH H1 H N N 249 HOH H2 H N N 250 ILE N N N N 251 ILE CA C N S 252 ILE C C N N 253 ILE O O N N 254 ILE CB C N S 255 ILE CG1 C N N 256 ILE CG2 C N N 257 ILE CD1 C N N 258 ILE OXT O N N 259 ILE H H N N 260 ILE H2 H N N 261 ILE HA H N N 262 ILE HB H N N 263 ILE HG12 H N N 264 ILE HG13 H N N 265 ILE HG21 H N N 266 ILE HG22 H N N 267 ILE HG23 H N N 268 ILE HD11 H N N 269 ILE HD12 H N N 270 ILE HD13 H N N 271 ILE HXT H N N 272 LEU N N N N 273 LEU CA C N S 274 LEU C C N N 275 LEU O O N N 276 LEU CB C N N 277 LEU CG C N N 278 LEU CD1 C N N 279 LEU CD2 C N N 280 LEU OXT O N N 281 LEU H H N N 282 LEU H2 H N N 283 LEU HA H N N 284 LEU HB2 H N N 285 LEU HB3 H N N 286 LEU HG H N N 287 LEU HD11 H N N 288 LEU HD12 H N N 289 LEU HD13 H N N 290 LEU HD21 H N N 291 LEU HD22 H N N 292 LEU HD23 H N N 293 LEU HXT H N N 294 LYS N N N N 295 LYS CA C N S 296 LYS C C N N 297 LYS O O N N 298 LYS CB C N N 299 LYS CG C N N 300 LYS CD C N N 301 LYS CE C N N 302 LYS NZ N N N 303 LYS OXT O N N 304 LYS H H N N 305 LYS H2 H N N 306 LYS HA H N N 307 LYS HB2 H N N 308 LYS HB3 H N N 309 LYS HG2 H N N 310 LYS HG3 H N N 311 LYS HD2 H N N 312 LYS HD3 H N N 313 LYS HE2 H N N 314 LYS HE3 H N N 315 LYS HZ1 H N N 316 LYS HZ2 H N N 317 LYS HZ3 H N N 318 LYS HXT H N N 319 MET N N N N 320 MET CA C N S 321 MET C C N N 322 MET O O N N 323 MET CB C N N 324 MET CG C N N 325 MET SD S N N 326 MET CE C N N 327 MET OXT O N N 328 MET H H N N 329 MET H2 H N N 330 MET HA H N N 331 MET HB2 H N N 332 MET HB3 H N N 333 MET HG2 H N N 334 MET HG3 H N N 335 MET HE1 H N N 336 MET HE2 H N N 337 MET HE3 H N N 338 MET HXT H N N 339 NAG C1 C N R 340 NAG C2 C N R 341 NAG C3 C N R 342 NAG C4 C N S 343 NAG C5 C N R 344 NAG C6 C N N 345 NAG C7 C N N 346 NAG C8 C N N 347 NAG N2 N N N 348 NAG O1 O N N 349 NAG O3 O N N 350 NAG O4 O N N 351 NAG O5 O N N 352 NAG O6 O N N 353 NAG O7 O N N 354 NAG H1 H N N 355 NAG H2 H N N 356 NAG H3 H N N 357 NAG H4 H N N 358 NAG H5 H N N 359 NAG H61 H N N 360 NAG H62 H N N 361 NAG H81 H N N 362 NAG H82 H N N 363 NAG H83 H N N 364 NAG HN2 H N N 365 NAG HO1 H N N 366 NAG HO3 H N N 367 NAG HO4 H N N 368 NAG HO6 H N N 369 OLA C1 C N N 370 OLA O1 O N N 371 OLA O2 O N N 372 OLA C2 C N N 373 OLA C3 C N N 374 OLA C4 C N N 375 OLA C5 C N N 376 OLA C6 C N N 377 OLA C7 C N N 378 OLA C8 C N N 379 OLA C9 C N N 380 OLA C10 C N N 381 OLA C11 C N N 382 OLA C12 C N N 383 OLA C13 C N N 384 OLA C14 C N N 385 OLA C15 C N N 386 OLA C16 C N N 387 OLA C17 C N N 388 OLA C18 C N N 389 OLA HO2 H N N 390 OLA H21 H N N 391 OLA H22 H N N 392 OLA H31 H N N 393 OLA H32 H N N 394 OLA H41 H N N 395 OLA H42 H N N 396 OLA H51 H N N 397 OLA H52 H N N 398 OLA H61 H N N 399 OLA H62 H N N 400 OLA H71 H N N 401 OLA H72 H N N 402 OLA H81 H N N 403 OLA H82 H N N 404 OLA H9 H N N 405 OLA H10 H N N 406 OLA H111 H N N 407 OLA H112 H N N 408 OLA H121 H N N 409 OLA H122 H N N 410 OLA H131 H N N 411 OLA H132 H N N 412 OLA H141 H N N 413 OLA H142 H N N 414 OLA H151 H N N 415 OLA H152 H N N 416 OLA H161 H N N 417 OLA H162 H N N 418 OLA H171 H N N 419 OLA H172 H N N 420 OLA H181 H N N 421 OLA H182 H N N 422 OLA H183 H N N 423 PHE N N N N 424 PHE CA C N S 425 PHE C C N N 426 PHE O O N N 427 PHE CB C N N 428 PHE CG C Y N 429 PHE CD1 C Y N 430 PHE CD2 C Y N 431 PHE CE1 C Y N 432 PHE CE2 C Y N 433 PHE CZ C Y N 434 PHE OXT O N N 435 PHE H H N N 436 PHE H2 H N N 437 PHE HA H N N 438 PHE HB2 H N N 439 PHE HB3 H N N 440 PHE HD1 H N N 441 PHE HD2 H N N 442 PHE HE1 H N N 443 PHE HE2 H N N 444 PHE HZ H N N 445 PHE HXT H N N 446 PRO N N N N 447 PRO CA C N S 448 PRO C C N N 449 PRO O O N N 450 PRO CB C N N 451 PRO CG C N N 452 PRO CD C N N 453 PRO OXT O N N 454 PRO H H N N 455 PRO HA H N N 456 PRO HB2 H N N 457 PRO HB3 H N N 458 PRO HG2 H N N 459 PRO HG3 H N N 460 PRO HD2 H N N 461 PRO HD3 H N N 462 PRO HXT H N N 463 SER N N N N 464 SER CA C N S 465 SER C C N N 466 SER O O N N 467 SER CB C N N 468 SER OG O N N 469 SER OXT O N N 470 SER H H N N 471 SER H2 H N N 472 SER HA H N N 473 SER HB2 H N N 474 SER HB3 H N N 475 SER HG H N N 476 SER HXT H N N 477 THR N N N N 478 THR CA C N S 479 THR C C N N 480 THR O O N N 481 THR CB C N R 482 THR OG1 O N N 483 THR CG2 C N N 484 THR OXT O N N 485 THR H H N N 486 THR H2 H N N 487 THR HA H N N 488 THR HB H N N 489 THR HG1 H N N 490 THR HG21 H N N 491 THR HG22 H N N 492 THR HG23 H N N 493 THR HXT H N N 494 TRP N N N N 495 TRP CA C N S 496 TRP C C N N 497 TRP O O N N 498 TRP CB C N N 499 TRP CG C Y N 500 TRP CD1 C Y N 501 TRP CD2 C Y N 502 TRP NE1 N Y N 503 TRP CE2 C Y N 504 TRP CE3 C Y N 505 TRP CZ2 C Y N 506 TRP CZ3 C Y N 507 TRP CH2 C Y N 508 TRP OXT O N N 509 TRP H H N N 510 TRP H2 H N N 511 TRP HA H N N 512 TRP HB2 H N N 513 TRP HB3 H N N 514 TRP HD1 H N N 515 TRP HE1 H N N 516 TRP HE3 H N N 517 TRP HZ2 H N N 518 TRP HZ3 H N N 519 TRP HH2 H N N 520 TRP HXT H N N 521 TYR N N N N 522 TYR CA C N S 523 TYR C C N N 524 TYR O O N N 525 TYR CB C N N 526 TYR CG C Y N 527 TYR CD1 C Y N 528 TYR CD2 C Y N 529 TYR CE1 C Y N 530 TYR CE2 C Y N 531 TYR CZ C Y N 532 TYR OH O N N 533 TYR OXT O N N 534 TYR H H N N 535 TYR H2 H N N 536 TYR HA H N N 537 TYR HB2 H N N 538 TYR HB3 H N N 539 TYR HD1 H N N 540 TYR HD2 H N N 541 TYR HE1 H N N 542 TYR HE2 H N N 543 TYR HH H N N 544 TYR HXT H N N 545 VAL N N N N 546 VAL CA C N S 547 VAL C C N N 548 VAL O O N N 549 VAL CB C N N 550 VAL CG1 C N N 551 VAL CG2 C N N 552 VAL OXT O N N 553 VAL H H N N 554 VAL H2 H N N 555 VAL HA H N N 556 VAL HB H N N 557 VAL HG11 H N N 558 VAL HG12 H N N 559 VAL HG13 H N N 560 VAL HG21 H N N 561 VAL HG22 H N N 562 VAL HG23 H N N 563 VAL HXT H N N 564 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 EIC C1 C2 sing N N 107 EIC C1 O1 doub N N 108 EIC C1 O2 sing N N 109 EIC C2 C3 sing N N 110 EIC C2 H21 sing N N 111 EIC C2 H22 sing N N 112 EIC C3 C4 sing N N 113 EIC C3 H31 sing N N 114 EIC C3 H32 sing N N 115 EIC C4 C5 sing N N 116 EIC C4 H41 sing N N 117 EIC C4 H42 sing N N 118 EIC C5 C6 sing N N 119 EIC C5 H51 sing N N 120 EIC C5 H52 sing N N 121 EIC C6 C7 sing N N 122 EIC C6 H61 sing N N 123 EIC C6 H62 sing N N 124 EIC C7 C8 sing N N 125 EIC C7 H71 sing N N 126 EIC C7 H72 sing N N 127 EIC C8 C9 sing N N 128 EIC C8 H81 sing N N 129 EIC C8 H82 sing N N 130 EIC C9 C10 doub N Z 131 EIC C9 H91 sing N N 132 EIC C10 C11 sing N N 133 EIC C10 H1O1 sing N N 134 EIC C11 C12 sing N N 135 EIC C11 H111 sing N N 136 EIC C11 H112 sing N N 137 EIC C12 C13 doub N Z 138 EIC C12 H121 sing N N 139 EIC C13 C14 sing N N 140 EIC C13 H131 sing N N 141 EIC C14 C15 sing N N 142 EIC C14 H141 sing N N 143 EIC C14 H142 sing N N 144 EIC C15 C16 sing N N 145 EIC C15 H151 sing N N 146 EIC C15 H152 sing N N 147 EIC C16 C17 sing N N 148 EIC C16 H161 sing N N 149 EIC C16 H162 sing N N 150 EIC C17 C18 sing N N 151 EIC C17 H171 sing N N 152 EIC C17 H172 sing N N 153 EIC C18 H181 sing N N 154 EIC C18 H182 sing N N 155 EIC C18 H183 sing N N 156 EIC O2 HO2 sing N N 157 GLN N CA sing N N 158 GLN N H sing N N 159 GLN N H2 sing N N 160 GLN CA C sing N N 161 GLN CA CB sing N N 162 GLN CA HA sing N N 163 GLN C O doub N N 164 GLN C OXT sing N N 165 GLN CB CG sing N N 166 GLN CB HB2 sing N N 167 GLN CB HB3 sing N N 168 GLN CG CD sing N N 169 GLN CG HG2 sing N N 170 GLN CG HG3 sing N N 171 GLN CD OE1 doub N N 172 GLN CD NE2 sing N N 173 GLN NE2 HE21 sing N N 174 GLN NE2 HE22 sing N N 175 GLN OXT HXT sing N N 176 GLU N CA sing N N 177 GLU N H sing N N 178 GLU N H2 sing N N 179 GLU CA C sing N N 180 GLU CA CB sing N N 181 GLU CA HA sing N N 182 GLU C O doub N N 183 GLU C OXT sing N N 184 GLU CB CG sing N N 185 GLU CB HB2 sing N N 186 GLU CB HB3 sing N N 187 GLU CG CD sing N N 188 GLU CG HG2 sing N N 189 GLU CG HG3 sing N N 190 GLU CD OE1 doub N N 191 GLU CD OE2 sing N N 192 GLU OE2 HE2 sing N N 193 GLU OXT HXT sing N N 194 GLY N CA sing N N 195 GLY N H sing N N 196 GLY N H2 sing N N 197 GLY CA C sing N N 198 GLY CA HA2 sing N N 199 GLY CA HA3 sing N N 200 GLY C O doub N N 201 GLY C OXT sing N N 202 GLY OXT HXT sing N N 203 GOL C1 O1 sing N N 204 GOL C1 C2 sing N N 205 GOL C1 H11 sing N N 206 GOL C1 H12 sing N N 207 GOL O1 HO1 sing N N 208 GOL C2 O2 sing N N 209 GOL C2 C3 sing N N 210 GOL C2 H2 sing N N 211 GOL O2 HO2 sing N N 212 GOL C3 O3 sing N N 213 GOL C3 H31 sing N N 214 GOL C3 H32 sing N N 215 GOL O3 HO3 sing N N 216 HIS N CA sing N N 217 HIS N H sing N N 218 HIS N H2 sing N N 219 HIS CA C sing N N 220 HIS CA CB sing N N 221 HIS CA HA sing N N 222 HIS C O doub N N 223 HIS C OXT sing N N 224 HIS CB CG sing N N 225 HIS CB HB2 sing N N 226 HIS CB HB3 sing N N 227 HIS CG ND1 sing Y N 228 HIS CG CD2 doub Y N 229 HIS ND1 CE1 doub Y N 230 HIS ND1 HD1 sing N N 231 HIS CD2 NE2 sing Y N 232 HIS CD2 HD2 sing N N 233 HIS CE1 NE2 sing Y N 234 HIS CE1 HE1 sing N N 235 HIS NE2 HE2 sing N N 236 HIS OXT HXT sing N N 237 HOH O H1 sing N N 238 HOH O H2 sing N N 239 ILE N CA sing N N 240 ILE N H sing N N 241 ILE N H2 sing N N 242 ILE CA C sing N N 243 ILE CA CB sing N N 244 ILE CA HA sing N N 245 ILE C O doub N N 246 ILE C OXT sing N N 247 ILE CB CG1 sing N N 248 ILE CB CG2 sing N N 249 ILE CB HB sing N N 250 ILE CG1 CD1 sing N N 251 ILE CG1 HG12 sing N N 252 ILE CG1 HG13 sing N N 253 ILE CG2 HG21 sing N N 254 ILE CG2 HG22 sing N N 255 ILE CG2 HG23 sing N N 256 ILE CD1 HD11 sing N N 257 ILE CD1 HD12 sing N N 258 ILE CD1 HD13 sing N N 259 ILE OXT HXT sing N N 260 LEU N CA sing N N 261 LEU N H sing N N 262 LEU N H2 sing N N 263 LEU CA C sing N N 264 LEU CA CB sing N N 265 LEU CA HA sing N N 266 LEU C O doub N N 267 LEU C OXT sing N N 268 LEU CB CG sing N N 269 LEU CB HB2 sing N N 270 LEU CB HB3 sing N N 271 LEU CG CD1 sing N N 272 LEU CG CD2 sing N N 273 LEU CG HG sing N N 274 LEU CD1 HD11 sing N N 275 LEU CD1 HD12 sing N N 276 LEU CD1 HD13 sing N N 277 LEU CD2 HD21 sing N N 278 LEU CD2 HD22 sing N N 279 LEU CD2 HD23 sing N N 280 LEU OXT HXT sing N N 281 LYS N CA sing N N 282 LYS N H sing N N 283 LYS N H2 sing N N 284 LYS CA C sing N N 285 LYS CA CB sing N N 286 LYS CA HA sing N N 287 LYS C O doub N N 288 LYS C OXT sing N N 289 LYS CB CG sing N N 290 LYS CB HB2 sing N N 291 LYS CB HB3 sing N N 292 LYS CG CD sing N N 293 LYS CG HG2 sing N N 294 LYS CG HG3 sing N N 295 LYS CD CE sing N N 296 LYS CD HD2 sing N N 297 LYS CD HD3 sing N N 298 LYS CE NZ sing N N 299 LYS CE HE2 sing N N 300 LYS CE HE3 sing N N 301 LYS NZ HZ1 sing N N 302 LYS NZ HZ2 sing N N 303 LYS NZ HZ3 sing N N 304 LYS OXT HXT sing N N 305 MET N CA sing N N 306 MET N H sing N N 307 MET N H2 sing N N 308 MET CA C sing N N 309 MET CA CB sing N N 310 MET CA HA sing N N 311 MET C O doub N N 312 MET C OXT sing N N 313 MET CB CG sing N N 314 MET CB HB2 sing N N 315 MET CB HB3 sing N N 316 MET CG SD sing N N 317 MET CG HG2 sing N N 318 MET CG HG3 sing N N 319 MET SD CE sing N N 320 MET CE HE1 sing N N 321 MET CE HE2 sing N N 322 MET CE HE3 sing N N 323 MET OXT HXT sing N N 324 NAG C1 C2 sing N N 325 NAG C1 O1 sing N N 326 NAG C1 O5 sing N N 327 NAG C1 H1 sing N N 328 NAG C2 C3 sing N N 329 NAG C2 N2 sing N N 330 NAG C2 H2 sing N N 331 NAG C3 C4 sing N N 332 NAG C3 O3 sing N N 333 NAG C3 H3 sing N N 334 NAG C4 C5 sing N N 335 NAG C4 O4 sing N N 336 NAG C4 H4 sing N N 337 NAG C5 C6 sing N N 338 NAG C5 O5 sing N N 339 NAG C5 H5 sing N N 340 NAG C6 O6 sing N N 341 NAG C6 H61 sing N N 342 NAG C6 H62 sing N N 343 NAG C7 C8 sing N N 344 NAG C7 N2 sing N N 345 NAG C7 O7 doub N N 346 NAG C8 H81 sing N N 347 NAG C8 H82 sing N N 348 NAG C8 H83 sing N N 349 NAG N2 HN2 sing N N 350 NAG O1 HO1 sing N N 351 NAG O3 HO3 sing N N 352 NAG O4 HO4 sing N N 353 NAG O6 HO6 sing N N 354 OLA C1 O1 doub N N 355 OLA C1 O2 sing N N 356 OLA C1 C2 sing N N 357 OLA O2 HO2 sing N N 358 OLA C2 C3 sing N N 359 OLA C2 H21 sing N N 360 OLA C2 H22 sing N N 361 OLA C3 C4 sing N N 362 OLA C3 H31 sing N N 363 OLA C3 H32 sing N N 364 OLA C4 C5 sing N N 365 OLA C4 H41 sing N N 366 OLA C4 H42 sing N N 367 OLA C5 C6 sing N N 368 OLA C5 H51 sing N N 369 OLA C5 H52 sing N N 370 OLA C6 C7 sing N N 371 OLA C6 H61 sing N N 372 OLA C6 H62 sing N N 373 OLA C7 C8 sing N N 374 OLA C7 H71 sing N N 375 OLA C7 H72 sing N N 376 OLA C8 C9 sing N N 377 OLA C8 H81 sing N N 378 OLA C8 H82 sing N N 379 OLA C9 C10 doub N Z 380 OLA C9 H9 sing N N 381 OLA C10 C11 sing N N 382 OLA C10 H10 sing N N 383 OLA C11 C12 sing N N 384 OLA C11 H111 sing N N 385 OLA C11 H112 sing N N 386 OLA C12 C13 sing N N 387 OLA C12 H121 sing N N 388 OLA C12 H122 sing N N 389 OLA C13 C14 sing N N 390 OLA C13 H131 sing N N 391 OLA C13 H132 sing N N 392 OLA C14 C15 sing N N 393 OLA C14 H141 sing N N 394 OLA C14 H142 sing N N 395 OLA C15 C16 sing N N 396 OLA C15 H151 sing N N 397 OLA C15 H152 sing N N 398 OLA C16 C17 sing N N 399 OLA C16 H161 sing N N 400 OLA C16 H162 sing N N 401 OLA C17 C18 sing N N 402 OLA C17 H171 sing N N 403 OLA C17 H172 sing N N 404 OLA C18 H181 sing N N 405 OLA C18 H182 sing N N 406 OLA C18 H183 sing N N 407 PHE N CA sing N N 408 PHE N H sing N N 409 PHE N H2 sing N N 410 PHE CA C sing N N 411 PHE CA CB sing N N 412 PHE CA HA sing N N 413 PHE C O doub N N 414 PHE C OXT sing N N 415 PHE CB CG sing N N 416 PHE CB HB2 sing N N 417 PHE CB HB3 sing N N 418 PHE CG CD1 doub Y N 419 PHE CG CD2 sing Y N 420 PHE CD1 CE1 sing Y N 421 PHE CD1 HD1 sing N N 422 PHE CD2 CE2 doub Y N 423 PHE CD2 HD2 sing N N 424 PHE CE1 CZ doub Y N 425 PHE CE1 HE1 sing N N 426 PHE CE2 CZ sing Y N 427 PHE CE2 HE2 sing N N 428 PHE CZ HZ sing N N 429 PHE OXT HXT sing N N 430 PRO N CA sing N N 431 PRO N CD sing N N 432 PRO N H sing N N 433 PRO CA C sing N N 434 PRO CA CB sing N N 435 PRO CA HA sing N N 436 PRO C O doub N N 437 PRO C OXT sing N N 438 PRO CB CG sing N N 439 PRO CB HB2 sing N N 440 PRO CB HB3 sing N N 441 PRO CG CD sing N N 442 PRO CG HG2 sing N N 443 PRO CG HG3 sing N N 444 PRO CD HD2 sing N N 445 PRO CD HD3 sing N N 446 PRO OXT HXT sing N N 447 SER N CA sing N N 448 SER N H sing N N 449 SER N H2 sing N N 450 SER CA C sing N N 451 SER CA CB sing N N 452 SER CA HA sing N N 453 SER C O doub N N 454 SER C OXT sing N N 455 SER CB OG sing N N 456 SER CB HB2 sing N N 457 SER CB HB3 sing N N 458 SER OG HG sing N N 459 SER OXT HXT sing N N 460 THR N CA sing N N 461 THR N H sing N N 462 THR N H2 sing N N 463 THR CA C sing N N 464 THR CA CB sing N N 465 THR CA HA sing N N 466 THR C O doub N N 467 THR C OXT sing N N 468 THR CB OG1 sing N N 469 THR CB CG2 sing N N 470 THR CB HB sing N N 471 THR OG1 HG1 sing N N 472 THR CG2 HG21 sing N N 473 THR CG2 HG22 sing N N 474 THR CG2 HG23 sing N N 475 THR OXT HXT sing N N 476 TRP N CA sing N N 477 TRP N H sing N N 478 TRP N H2 sing N N 479 TRP CA C sing N N 480 TRP CA CB sing N N 481 TRP CA HA sing N N 482 TRP C O doub N N 483 TRP C OXT sing N N 484 TRP CB CG sing N N 485 TRP CB HB2 sing N N 486 TRP CB HB3 sing N N 487 TRP CG CD1 doub Y N 488 TRP CG CD2 sing Y N 489 TRP CD1 NE1 sing Y N 490 TRP CD1 HD1 sing N N 491 TRP CD2 CE2 doub Y N 492 TRP CD2 CE3 sing Y N 493 TRP NE1 CE2 sing Y N 494 TRP NE1 HE1 sing N N 495 TRP CE2 CZ2 sing Y N 496 TRP CE3 CZ3 doub Y N 497 TRP CE3 HE3 sing N N 498 TRP CZ2 CH2 doub Y N 499 TRP CZ2 HZ2 sing N N 500 TRP CZ3 CH2 sing Y N 501 TRP CZ3 HZ3 sing N N 502 TRP CH2 HH2 sing N N 503 TRP OXT HXT sing N N 504 TYR N CA sing N N 505 TYR N H sing N N 506 TYR N H2 sing N N 507 TYR CA C sing N N 508 TYR CA CB sing N N 509 TYR CA HA sing N N 510 TYR C O doub N N 511 TYR C OXT sing N N 512 TYR CB CG sing N N 513 TYR CB HB2 sing N N 514 TYR CB HB3 sing N N 515 TYR CG CD1 doub Y N 516 TYR CG CD2 sing Y N 517 TYR CD1 CE1 sing Y N 518 TYR CD1 HD1 sing N N 519 TYR CD2 CE2 doub Y N 520 TYR CD2 HD2 sing N N 521 TYR CE1 CZ doub Y N 522 TYR CE1 HE1 sing N N 523 TYR CE2 CZ sing Y N 524 TYR CE2 HE2 sing N N 525 TYR CZ OH sing N N 526 TYR OH HH sing N N 527 TYR OXT HXT sing N N 528 VAL N CA sing N N 529 VAL N H sing N N 530 VAL N H2 sing N N 531 VAL CA C sing N N 532 VAL CA CB sing N N 533 VAL CA HA sing N N 534 VAL C O doub N N 535 VAL C OXT sing N N 536 VAL CB CG1 sing N N 537 VAL CB CG2 sing N N 538 VAL CB HB sing N N 539 VAL CG1 HG11 sing N N 540 VAL CG1 HG12 sing N N 541 VAL CG1 HG13 sing N N 542 VAL CG2 HG21 sing N N 543 VAL CG2 HG22 sing N N 544 VAL CG2 HG23 sing N N 545 VAL OXT HXT sing N N 546 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 154 n B 2 NAG 2 B NAG 2 A NAG 155 n B 2 BMA 3 B BMA 3 A MAN 156 n C 3 NAG 1 C NAG 1 A NAG 158 n C 3 NAG 2 C NAG 2 A NAG 159 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}' LINUCS PDB-CARE ? 4 3 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 3 NAG 1 n 3 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 'OLEIC ACID' OLA 6 'LINOLEIC ACID' EIC 7 GLYCEROL GOL 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4NYR _pdbx_initial_refinement_model.details ? #