HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 11-DEC-13 4NZ9 TITLE CRYSTAL STRUCTURE OF FABI FROM S. AUREUS IN COMPLEX WITH A NOVEL TITLE 2 BENZIMIDAZOLE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH]; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ENOYL REDUCTASE; COMPND 5 SYNONYM: ENR; COMPND 6 EC: 1.3.1.39; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 367830; SOURCE 4 STRAIN: USA300; SOURCE 5 GENE: FABI, SAUSA300_0912; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS ROSSMAN FOLD, REDUCTASE, NADPH, REDUCTION, OXIDOREDUCTASE- KEYWDS 2 OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.MEHBOOB,M.E.JOHNSON,B.D.SANTARSIERO REVDAT 2 20-SEP-23 4NZ9 1 REMARK SEQADV REVDAT 1 31-DEC-14 4NZ9 0 JRNL AUTH S.MEHBOOB,L.TRUONG,B.D.SANTARSIERO,M.E.JOHNSON JRNL TITL TO BE PUBLISHED JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 24060 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1265 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1593 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 74 REMARK 3 BIN FREE R VALUE : 0.3250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3918 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 142 REMARK 3 SOLVENT ATOMS : 133 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.15000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : 0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.401 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.272 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.197 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.109 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.908 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.864 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4128 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5591 ; 1.173 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 507 ; 4.989 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;38.807 ;25.055 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 716 ;17.347 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;15.031 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 628 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3218 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4NZ9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083842. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29318 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.14700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3UIC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE, 40% PEG400, 0.1M REMARK 280 TRIS-HCL, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.27250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.51700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.27250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.51700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 GLY A -21 REMARK 465 SER A -20 REMARK 465 SER A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 SER A -12 REMARK 465 SER A -11 REMARK 465 GLY A -10 REMARK 465 LEU A -9 REMARK 465 VAL A -8 REMARK 465 PRO A -7 REMARK 465 ARG A -6 REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 HIS A -3 REMARK 465 MET A -2 REMARK 465 LEU A -1 REMARK 465 GLU A 0 REMARK 465 MET A 1 REMARK 465 MET B -22 REMARK 465 GLY B -21 REMARK 465 SER B -20 REMARK 465 SER B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 SER B -12 REMARK 465 SER B -11 REMARK 465 GLY B -10 REMARK 465 LEU B -9 REMARK 465 VAL B -8 REMARK 465 PRO B -7 REMARK 465 ARG B -6 REMARK 465 GLY B -5 REMARK 465 SER B -4 REMARK 465 HIS B -3 REMARK 465 MET B -2 REMARK 465 LEU B -1 REMARK 465 GLU B 0 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 3 -113.87 -129.09 REMARK 500 LEU A 4 -28.89 71.76 REMARK 500 ARG A 40 -67.03 -100.51 REMARK 500 LEU A 52 33.46 -67.86 REMARK 500 GLU A 53 45.44 -67.49 REMARK 500 GLU A 59 21.98 -63.84 REMARK 500 ALA A 60 -143.16 -83.83 REMARK 500 SER A 122 -58.89 -121.12 REMARK 500 ASN A 156 -23.63 71.85 REMARK 500 ASN A 158 -111.93 45.80 REMARK 500 ASP A 249 19.07 -153.77 REMARK 500 LEU B 52 54.23 -61.16 REMARK 500 GLU B 53 38.28 -86.99 REMARK 500 PRO B 58 60.64 4.96 REMARK 500 GLU B 59 -77.60 -99.03 REMARK 500 ALA B 60 57.05 35.20 REMARK 500 SER B 93 53.48 -142.68 REMARK 500 SER B 122 -57.52 -121.18 REMARK 500 ASN B 156 -7.42 70.71 REMARK 500 ASN B 158 -113.98 46.79 REMARK 500 SER B 238 32.40 -97.25 REMARK 500 ASP B 249 27.66 -154.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1JT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1JT B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B 302 DBREF 4NZ9 A 1 256 UNP Q2FI66 Q2FI66_STAA3 1 256 DBREF 4NZ9 B 1 256 UNP Q2FI66 Q2FI66_STAA3 1 256 SEQADV 4NZ9 MET A -22 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 GLY A -21 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 SER A -20 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 SER A -19 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS A -18 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS A -17 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS A -16 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS A -15 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS A -14 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS A -13 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 SER A -12 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 SER A -11 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 GLY A -10 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 LEU A -9 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 VAL A -8 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 PRO A -7 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 ARG A -6 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 GLY A -5 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 SER A -4 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS A -3 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 MET A -2 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 LEU A -1 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 GLU A 0 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 MET B -22 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 GLY B -21 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 SER B -20 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 SER B -19 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS B -18 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS B -17 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS B -16 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS B -15 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS B -14 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS B -13 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 SER B -12 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 SER B -11 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 GLY B -10 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 LEU B -9 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 VAL B -8 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 PRO B -7 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 ARG B -6 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 GLY B -5 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 SER B -4 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 HIS B -3 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 MET B -2 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 LEU B -1 UNP Q2FI66 EXPRESSION TAG SEQADV 4NZ9 GLU B 0 UNP Q2FI66 EXPRESSION TAG SEQRES 1 A 279 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 279 LEU VAL PRO ARG GLY SER HIS MET LEU GLU MET LEU ASN SEQRES 3 A 279 LEU GLU ASN LYS THR TYR VAL ILE MET GLY ILE ALA ASN SEQRES 4 A 279 LYS ARG SER ILE ALA PHE GLY VAL ALA LYS VAL LEU ASP SEQRES 5 A 279 GLN LEU GLY ALA LYS LEU VAL PHE THR TYR ARG LYS GLU SEQRES 6 A 279 ARG SER ARG LYS GLU LEU GLU LYS LEU LEU GLU GLN LEU SEQRES 7 A 279 ASN GLN PRO GLU ALA HIS LEU TYR GLN ILE ASP VAL GLN SEQRES 8 A 279 SER ASP GLU GLU VAL ILE ASN GLY PHE GLU GLN ILE GLY SEQRES 9 A 279 LYS ASP VAL GLY ASN ILE ASP GLY VAL TYR HIS SER ILE SEQRES 10 A 279 ALA PHE ALA ASN MET GLU ASP LEU ARG GLY ARG PHE SER SEQRES 11 A 279 GLU THR SER ARG GLU GLY PHE LEU LEU ALA GLN ASP ILE SEQRES 12 A 279 SER SER TYR SER LEU THR ILE VAL ALA HIS GLU ALA LYS SEQRES 13 A 279 LYS LEU MET PRO GLU GLY GLY SER ILE VAL ALA THR THR SEQRES 14 A 279 TYR LEU GLY GLY GLU PHE ALA VAL GLN ASN TYR ASN VAL SEQRES 15 A 279 MET GLY VAL ALA LYS ALA SER LEU GLU ALA ASN VAL LYS SEQRES 16 A 279 TYR LEU ALA LEU ASP LEU GLY PRO ASP ASN ILE ARG VAL SEQRES 17 A 279 ASN ALA ILE SER ALA GLY PRO ILE ARG THR LEU SER ALA SEQRES 18 A 279 LYS GLY VAL GLY GLY PHE ASN THR ILE LEU LYS GLU ILE SEQRES 19 A 279 GLU GLU ARG ALA PRO LEU LYS ARG ASN VAL ASP GLN VAL SEQRES 20 A 279 GLU VAL GLY LYS THR ALA ALA TYR LEU LEU SER ASP LEU SEQRES 21 A 279 SER SER GLY VAL THR GLY GLU ASN ILE HIS VAL ASP SER SEQRES 22 A 279 GLY PHE HIS ALA ILE LYS SEQRES 1 B 279 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 279 LEU VAL PRO ARG GLY SER HIS MET LEU GLU MET LEU ASN SEQRES 3 B 279 LEU GLU ASN LYS THR TYR VAL ILE MET GLY ILE ALA ASN SEQRES 4 B 279 LYS ARG SER ILE ALA PHE GLY VAL ALA LYS VAL LEU ASP SEQRES 5 B 279 GLN LEU GLY ALA LYS LEU VAL PHE THR TYR ARG LYS GLU SEQRES 6 B 279 ARG SER ARG LYS GLU LEU GLU LYS LEU LEU GLU GLN LEU SEQRES 7 B 279 ASN GLN PRO GLU ALA HIS LEU TYR GLN ILE ASP VAL GLN SEQRES 8 B 279 SER ASP GLU GLU VAL ILE ASN GLY PHE GLU GLN ILE GLY SEQRES 9 B 279 LYS ASP VAL GLY ASN ILE ASP GLY VAL TYR HIS SER ILE SEQRES 10 B 279 ALA PHE ALA ASN MET GLU ASP LEU ARG GLY ARG PHE SER SEQRES 11 B 279 GLU THR SER ARG GLU GLY PHE LEU LEU ALA GLN ASP ILE SEQRES 12 B 279 SER SER TYR SER LEU THR ILE VAL ALA HIS GLU ALA LYS SEQRES 13 B 279 LYS LEU MET PRO GLU GLY GLY SER ILE VAL ALA THR THR SEQRES 14 B 279 TYR LEU GLY GLY GLU PHE ALA VAL GLN ASN TYR ASN VAL SEQRES 15 B 279 MET GLY VAL ALA LYS ALA SER LEU GLU ALA ASN VAL LYS SEQRES 16 B 279 TYR LEU ALA LEU ASP LEU GLY PRO ASP ASN ILE ARG VAL SEQRES 17 B 279 ASN ALA ILE SER ALA GLY PRO ILE ARG THR LEU SER ALA SEQRES 18 B 279 LYS GLY VAL GLY GLY PHE ASN THR ILE LEU LYS GLU ILE SEQRES 19 B 279 GLU GLU ARG ALA PRO LEU LYS ARG ASN VAL ASP GLN VAL SEQRES 20 B 279 GLU VAL GLY LYS THR ALA ALA TYR LEU LEU SER ASP LEU SEQRES 21 B 279 SER SER GLY VAL THR GLY GLU ASN ILE HIS VAL ASP SER SEQRES 22 B 279 GLY PHE HIS ALA ILE LYS HET 1JT A 301 23 HET NAP A 302 48 HET 1JT B 301 23 HET NAP B 302 48 HETNAM 1JT 1-(4-METHOXY-3-METHYLBENZYL)-5,6,7,8-TETRAHYDRO-1H- HETNAM 2 1JT NAPHTHO[2,3-D]IMIDAZOLE HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 1JT 2(C20 H22 N2 O) FORMUL 4 NAP 2(C21 H28 N7 O17 P3) FORMUL 7 HOH *133(H2 O) HELIX 1 1 SER A 19 LEU A 31 1 13 HELIX 2 2 LYS A 41 LEU A 52 1 12 HELIX 3 3 SER A 69 GLY A 85 1 17 HELIX 4 4 ASN A 98 ARG A 103 5 6 HELIX 5 5 ARG A 105 THR A 109 5 5 HELIX 6 6 SER A 110 SER A 122 1 13 HELIX 7 7 SER A 122 LYS A 134 1 13 HELIX 8 8 TYR A 147 GLU A 151 5 5 HELIX 9 9 TYR A 157 GLY A 179 1 23 HELIX 10 10 THR A 195 LYS A 199 5 5 HELIX 11 11 GLY A 203 ALA A 215 1 13 HELIX 12 12 ASP A 222 SER A 235 1 14 HELIX 13 13 ASP A 236 SER A 239 5 4 HELIX 14 14 GLY A 251 ILE A 255 5 5 HELIX 15 15 SER B 19 LEU B 31 1 13 HELIX 16 16 LYS B 41 LEU B 52 1 12 HELIX 17 17 SER B 69 GLY B 85 1 17 HELIX 18 18 ASN B 98 ARG B 103 5 6 HELIX 19 19 ARG B 105 THR B 109 5 5 HELIX 20 20 SER B 110 SER B 122 1 13 HELIX 21 21 SER B 122 LYS B 134 1 13 HELIX 22 22 TYR B 147 GLU B 151 5 5 HELIX 23 23 ASN B 158 GLY B 179 1 22 HELIX 24 24 SER B 197 VAL B 201 5 5 HELIX 25 25 GLY B 203 ALA B 215 1 13 HELIX 26 26 ASP B 222 SER B 235 1 14 HELIX 27 27 ASP B 236 SER B 239 5 4 HELIX 28 28 GLY B 251 ILE B 255 5 5 SHEET 1 A 7 LEU A 62 GLN A 64 0 SHEET 2 A 7 LYS A 34 TYR A 39 1 N PHE A 37 O TYR A 63 SHEET 3 A 7 THR A 8 MET A 12 1 N ILE A 11 O VAL A 36 SHEET 4 A 7 GLY A 89 HIS A 92 1 O TYR A 91 N VAL A 10 SHEET 5 A 7 GLY A 140 THR A 146 1 O VAL A 143 N HIS A 92 SHEET 6 A 7 ILE A 183 ALA A 190 1 O ILE A 188 N THR A 146 SHEET 7 A 7 ASN A 245 VAL A 248 1 O ILE A 246 N SER A 189 SHEET 1 B 7 HIS B 61 GLN B 64 0 SHEET 2 B 7 LYS B 34 TYR B 39 1 N PHE B 37 O HIS B 61 SHEET 3 B 7 THR B 8 MET B 12 1 N ILE B 11 O VAL B 36 SHEET 4 B 7 GLY B 89 HIS B 92 1 O TYR B 91 N VAL B 10 SHEET 5 B 7 GLY B 140 THR B 146 1 O VAL B 143 N HIS B 92 SHEET 6 B 7 ILE B 183 ALA B 190 1 O ILE B 188 N THR B 146 SHEET 7 B 7 ASN B 245 VAL B 248 1 O ILE B 246 N ALA B 187 CISPEP 1 ARG A 103 GLY A 104 0 9.15 CISPEP 2 ARG B 103 GLY B 104 0 8.94 SITE 1 AC1 6 ALA A 97 TYR A 147 GLN A 155 TYR A 157 SITE 2 AC1 6 SER A 197 NAP A 302 SITE 1 AC2 31 GLY A 13 ILE A 14 ALA A 15 SER A 19 SITE 2 AC2 31 ILE A 20 ARG A 40 LYS A 41 SER A 44 SITE 3 AC2 31 ILE A 65 ASP A 66 VAL A 67 GLN A 68 SITE 4 AC2 31 SER A 93 ILE A 94 ALA A 95 ILE A 120 SITE 5 AC2 31 THR A 145 THR A 146 TYR A 147 LYS A 164 SITE 6 AC2 31 ALA A 190 GLY A 191 PRO A 192 ILE A 193 SITE 7 AC2 31 THR A 195 SER A 197 1JT A 301 HOH A 403 SITE 8 AC2 31 HOH A 405 HOH A 440 HOH A 441 SITE 1 AC3 8 LYS B 82 ALA B 97 TYR B 147 VAL B 154 SITE 2 AC3 8 TYR B 157 SER B 197 ILE B 207 NAP B 302 SITE 1 AC4 29 GLY B 13 ILE B 14 ALA B 15 SER B 19 SITE 2 AC4 29 ILE B 20 ARG B 40 LYS B 41 SER B 44 SITE 3 AC4 29 ILE B 65 ASP B 66 VAL B 67 GLN B 68 SITE 4 AC4 29 SER B 93 ILE B 94 ALA B 95 ILE B 120 SITE 5 AC4 29 THR B 145 THR B 146 LYS B 164 ALA B 190 SITE 6 AC4 29 GLY B 191 PRO B 192 ILE B 193 THR B 195 SITE 7 AC4 29 SER B 197 1JT B 301 HOH B 403 HOH B 404 SITE 8 AC4 29 HOH B 439 CRYST1 80.545 61.034 112.609 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012415 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016384 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008880 0.00000