HEADER OXIDOREDUCTASE 12-DEC-13 4NZH TITLE A. FUMIGATUS FLAVIN-DEPENDENT ORNITHINE MONOOXYGENASE R279A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-ORNITHINE N5 MONOOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: L-ORNITHINE N5-OXYGENASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS FUMIGATUS; SOURCE 3 ORGANISM_TAXID: 746128; SOURCE 4 GENE: SIDA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15A KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.ROBINSON,S.FRANCESCHINI,P.SOBRADO REVDAT 2 28-FEB-24 4NZH 1 REMARK SEQADV REVDAT 1 04-MAR-15 4NZH 0 JRNL AUTH R.ROBINSON,S.FRANCESCHINI,P.SOBRADO JRNL TITL A. FUMIGATUS FLAVIN-DEPENDENT ORNITHINE MONOOXYGENASE R279A JRNL TITL 2 MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0119 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 30804 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1681 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2126 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3488 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 204 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.22000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.208 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.174 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.136 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.964 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3690 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5015 ; 0.964 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 457 ; 4.818 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 165 ;35.977 ;23.515 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 606 ;13.812 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;16.766 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 559 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2795 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1807 ; 0.503 ; 1.614 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2255 ; 0.913 ; 2.409 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1880 ; 0.476 ; 1.710 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5657 ; 6.205 ;14.390 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 31 A 213 REMARK 3 RESIDUE RANGE : A 408 A 455 REMARK 3 RESIDUE RANGE : A 464 A 489 REMARK 3 ORIGIN FOR THE GROUP (A): -20.2550 -30.3390 30.5150 REMARK 3 T TENSOR REMARK 3 T11: 0.1668 T22: 0.0198 REMARK 3 T33: 0.2305 T12: -0.0063 REMARK 3 T13: 0.0173 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 3.8818 L22: 0.8932 REMARK 3 L33: 1.1893 L12: 0.4567 REMARK 3 L13: 1.8267 L23: 0.3696 REMARK 3 S TENSOR REMARK 3 S11: -0.0358 S12: -0.0760 S13: 0.1410 REMARK 3 S21: 0.0775 S22: 0.0119 S23: -0.0779 REMARK 3 S31: -0.0635 S32: 0.0406 S33: 0.0238 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 214 A 284 REMARK 3 RESIDUE RANGE : A 324 A 407 REMARK 3 ORIGIN FOR THE GROUP (A): -20.7250 -19.1510 -2.7250 REMARK 3 T TENSOR REMARK 3 T11: 0.2774 T22: 0.0144 REMARK 3 T33: 0.2961 T12: -0.0255 REMARK 3 T13: 0.0326 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 1.6086 L22: 1.6703 REMARK 3 L33: 3.1151 L12: 0.7666 REMARK 3 L13: 1.4307 L23: 0.7574 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: 0.0774 S13: 0.0926 REMARK 3 S21: 0.0831 S22: -0.0148 S23: -0.1975 REMARK 3 S31: -0.2813 S32: 0.1883 S33: 0.0210 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 287 A 323 REMARK 3 RESIDUE RANGE : A 457 A 463 REMARK 3 ORIGIN FOR THE GROUP (A): -14.7870 -44.5540 14.4620 REMARK 3 T TENSOR REMARK 3 T11: 0.2881 T22: 0.1674 REMARK 3 T33: 0.4713 T12: 0.0348 REMARK 3 T13: 0.0840 T23: -0.0507 REMARK 3 L TENSOR REMARK 3 L11: 3.1647 L22: 1.8672 REMARK 3 L33: 4.9943 L12: 2.4228 REMARK 3 L13: 3.9747 L23: 3.0409 REMARK 3 S TENSOR REMARK 3 S11: -0.0834 S12: 0.3761 S13: -0.0233 REMARK 3 S21: -0.0483 S22: 0.1966 S23: -0.0244 REMARK 3 S31: -0.0365 S32: 0.4824 S33: -0.1132 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NZH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083850. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32825 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M AMMONIUM SULFATE, 0.1 M HEPES, REMARK 280 2% DIOXANE, PH 6.6, VAPOR DIFFUSION, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.95250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.04150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 72.45100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.95250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.04150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.45100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.95250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.04150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.45100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.95250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 42.04150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 72.45100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 71890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -119.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -77.90500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -84.08300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -77.90500 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 -84.08300 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 803 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 VAL A 4 REMARK 465 GLU A 5 REMARK 465 ARG A 6 REMARK 465 LYS A 7 REMARK 465 SER A 8 REMARK 465 GLU A 9 REMARK 465 SER A 10 REMARK 465 SER A 11 REMARK 465 TYR A 12 REMARK 465 LEU A 13 REMARK 465 GLY A 14 REMARK 465 MET A 15 REMARK 465 ARG A 16 REMARK 465 ASN A 17 REMARK 465 MET A 18 REMARK 465 GLN A 19 REMARK 465 PRO A 20 REMARK 465 GLU A 21 REMARK 465 GLN A 22 REMARK 465 ARG A 23 REMARK 465 LEU A 24 REMARK 465 SER A 25 REMARK 465 LEU A 26 REMARK 465 ASP A 27 REMARK 465 PRO A 28 REMARK 465 PRO A 29 REMARK 465 ARG A 30 REMARK 465 SER A 71 REMARK 465 ASN A 72 REMARK 465 ILE A 73 REMARK 465 HIS A 74 REMARK 465 SER A 385 REMARK 465 GLU A 386 REMARK 465 GLY A 387 REMARK 465 ALA A 388 REMARK 465 ALA A 389 REMARK 465 ASN A 390 REMARK 465 ASP A 391 REMARK 465 VAL A 392 REMARK 465 ALA A 491 REMARK 465 VAL A 492 REMARK 465 GLN A 493 REMARK 465 GLY A 494 REMARK 465 HIS A 495 REMARK 465 GLN A 496 REMARK 465 LEU A 497 REMARK 465 ARG A 498 REMARK 465 ALA A 499 REMARK 465 MET A 500 REMARK 465 LEU A 501 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 32 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 65 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 LYS A 100 CE NZ REMARK 470 ARG A 191 NE CZ NH1 NH2 REMARK 470 LYS A 243 CD CE NZ REMARK 470 LYS A 245 CE NZ REMARK 470 LYS A 267 CD CE NZ REMARK 470 LYS A 303 CE NZ REMARK 470 GLU A 311 CG CD OE1 OE2 REMARK 470 ARG A 314 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 320 CE NZ REMARK 470 ARG A 328 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 330 CG CD OE1 OE2 REMARK 470 LYS A 361 CE NZ REMARK 470 LYS A 379 CD CE NZ REMARK 470 GLU A 384 CG CD OE1 OE2 REMARK 470 LYS A 393 CG CD CE NZ REMARK 470 ARG A 414 CD NE CZ NH1 NH2 REMARK 470 GLU A 448 CG CD OE1 OE2 REMARK 470 GLU A 485 CG CD OE1 OE2 REMARK 470 GLN A 486 CG CD OE1 NE2 REMARK 470 ARG A 489 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 107 48.90 -86.07 REMARK 500 ALA A 110 -38.75 -141.57 REMARK 500 ASN A 323 -30.14 -149.44 REMARK 500 HIS A 367 21.56 -146.58 REMARK 500 ALA A 404 68.08 -106.80 REMARK 500 TYR A 436 -1.49 78.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ORN A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 606 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4B63 RELATED DB: PDB REMARK 900 RELATED ID: 4B64 RELATED DB: PDB REMARK 900 RELATED ID: 4B65 RELATED DB: PDB REMARK 900 RELATED ID: 4B66 RELATED DB: PDB REMARK 900 RELATED ID: 4B67 RELATED DB: PDB REMARK 900 RELATED ID: 4B68 RELATED DB: PDB REMARK 900 RELATED ID: 4B69 RELATED DB: PDB DBREF 4NZH A 1 501 UNP Q5SE95 Q5SE95_ASPFM 1 501 SEQADV 4NZH ALA A 279 UNP Q5SE95 ARG 279 ENGINEERED MUTATION SEQRES 1 A 501 MET GLU SER VAL GLU ARG LYS SER GLU SER SER TYR LEU SEQRES 2 A 501 GLY MET ARG ASN MET GLN PRO GLU GLN ARG LEU SER LEU SEQRES 3 A 501 ASP PRO PRO ARG LEU ARG SER THR PRO GLN ASP GLU LEU SEQRES 4 A 501 HIS ASP LEU LEU CYS VAL GLY PHE GLY PRO ALA SER LEU SEQRES 5 A 501 ALA ILE ALA ILE ALA LEU HIS ASP ALA LEU ASP PRO ARG SEQRES 6 A 501 LEU ASN LYS SER ALA SER ASN ILE HIS ALA GLN PRO LYS SEQRES 7 A 501 ILE CYS PHE LEU GLU ARG GLN LYS GLN PHE ALA TRP HIS SEQRES 8 A 501 SER GLY MET LEU VAL PRO GLY SER LYS MET GLN ILE SER SEQRES 9 A 501 PHE ILE LYS ASP LEU ALA THR LEU ARG ASP PRO ARG SER SEQRES 10 A 501 SER PHE THR PHE LEU ASN TYR LEU HIS GLN LYS GLY ARG SEQRES 11 A 501 LEU ILE HIS PHE THR ASN LEU SER THR PHE LEU PRO ALA SEQRES 12 A 501 ARG LEU GLU PHE GLU ASP TYR MET ARG TRP CYS ALA GLN SEQRES 13 A 501 GLN PHE SER ASP VAL VAL ALA TYR GLY GLU GLU VAL VAL SEQRES 14 A 501 GLU VAL ILE PRO GLY LYS SER ASP PRO SER SER SER VAL SEQRES 15 A 501 VAL ASP PHE PHE THR VAL ARG SER ARG ASN VAL GLU THR SEQRES 16 A 501 GLY GLU ILE SER ALA ARG ARG THR ARG LYS VAL VAL ILE SEQRES 17 A 501 ALA ILE GLY GLY THR ALA LYS MET PRO SER GLY LEU PRO SEQRES 18 A 501 GLN ASP PRO ARG ILE ILE HIS SER SER LYS TYR CYS THR SEQRES 19 A 501 THR LEU PRO ALA LEU LEU LYS ASP LYS SER LYS PRO TYR SEQRES 20 A 501 ASN ILE ALA VAL LEU GLY SER GLY GLN SER ALA ALA GLU SEQRES 21 A 501 ILE PHE HIS ASP LEU GLN LYS ARG TYR PRO ASN SER ARG SEQRES 22 A 501 THR THR LEU ILE MET ALA ASP SER ALA MET ARG PRO SER SEQRES 23 A 501 ASP ASP SER PRO PHE VAL ASN GLU ILE PHE ASN PRO GLU SEQRES 24 A 501 ARG VAL ASP LYS PHE TYR SER GLN SER ALA ALA GLU ARG SEQRES 25 A 501 GLN ARG SER LEU LEU ALA ASP LYS ALA THR ASN TYR SER SEQRES 26 A 501 VAL VAL ARG LEU GLU LEU ILE GLU GLU ILE TYR ASN ASP SEQRES 27 A 501 MET TYR LEU GLN ARG VAL LYS ASN PRO ASP GLU THR GLN SEQRES 28 A 501 TRP GLN HIS ARG ILE LEU PRO GLU ARG LYS ILE THR ARG SEQRES 29 A 501 VAL GLU HIS HIS GLY PRO GLN SER ARG MET ARG ILE HIS SEQRES 30 A 501 LEU LYS SER SER LYS PRO GLU SER GLU GLY ALA ALA ASN SEQRES 31 A 501 ASP VAL LYS GLU THR LEU GLU VAL ASP ALA LEU MET VAL SEQRES 32 A 501 ALA THR GLY TYR ASN ARG ASN ALA HIS GLU ARG LEU LEU SEQRES 33 A 501 SER LYS VAL GLN HIS LEU ARG PRO THR GLY GLN ASP GLN SEQRES 34 A 501 TRP LYS PRO HIS ARG ASP TYR ARG VAL GLU MET ASP PRO SEQRES 35 A 501 SER LYS VAL SER SER GLU ALA GLY ILE TRP LEU GLN GLY SEQRES 36 A 501 CYS ASN GLU ARG THR HIS GLY LEU SER ASP SER LEU LEU SEQRES 37 A 501 SER VAL LEU ALA VAL ARG GLY GLY GLU MET VAL GLN SER SEQRES 38 A 501 ILE PHE GLY GLU GLN LEU GLU ARG ALA ALA VAL GLN GLY SEQRES 39 A 501 HIS GLN LEU ARG ALA MET LEU HET FAD A 601 53 HET ORN A 602 9 HET GOL A 603 6 HET GOL A 604 6 HET GOL A 605 6 HET GOL A 606 6 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM ORN L-ORNITHINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 ORN C5 H12 N2 O2 FORMUL 4 GOL 4(C3 H8 O3) FORMUL 8 HOH *204(H2 O) HELIX 1 1 GLY A 48 LEU A 62 1 15 HELIX 2 2 HIS A 91 LEU A 95 5 5 HELIX 3 3 SER A 104 ASP A 108 5 5 HELIX 4 4 THR A 120 LYS A 128 1 9 HELIX 5 5 ARG A 130 ASN A 136 1 7 HELIX 6 6 ALA A 143 GLN A 156 1 14 HELIX 7 7 GLN A 157 ASP A 160 5 4 HELIX 8 8 LYS A 231 LEU A 240 1 10 HELIX 9 9 GLY A 255 TYR A 269 1 15 HELIX 10 10 SER A 289 GLU A 294 1 6 HELIX 11 11 ILE A 295 PRO A 298 5 4 HELIX 12 12 GLU A 299 GLN A 307 1 9 HELIX 13 13 SER A 308 ASP A 319 1 12 HELIX 14 14 LYS A 320 ASN A 323 5 4 HELIX 15 15 ARG A 328 ASN A 346 1 19 HELIX 16 16 ASP A 348 TRP A 352 5 5 HELIX 17 17 ALA A 411 LEU A 416 1 6 HELIX 18 18 SER A 417 ARG A 423 5 7 HELIX 19 19 ASN A 457 GLY A 462 1 6 HELIX 20 20 VAL A 470 ALA A 490 1 21 SHEET 1 A 6 VAL A 162 TYR A 164 0 SHEET 2 A 6 ILE A 79 GLU A 83 1 N PHE A 81 O ALA A 163 SHEET 3 A 6 HIS A 40 VAL A 45 1 N CYS A 44 O LEU A 82 SHEET 4 A 6 ILE A 198 ILE A 208 1 O VAL A 207 N VAL A 45 SHEET 5 A 6 PHE A 185 ASN A 192 -1 N VAL A 188 O ARG A 201 SHEET 6 A 6 GLU A 166 GLY A 174 -1 N GLU A 167 O ARG A 191 SHEET 1 B 5 VAL A 162 TYR A 164 0 SHEET 2 B 5 ILE A 79 GLU A 83 1 N PHE A 81 O ALA A 163 SHEET 3 B 5 HIS A 40 VAL A 45 1 N CYS A 44 O LEU A 82 SHEET 4 B 5 ILE A 198 ILE A 208 1 O VAL A 207 N VAL A 45 SHEET 5 B 5 GLY A 450 LEU A 453 1 O TRP A 452 N VAL A 206 SHEET 1 C 2 THR A 213 ALA A 214 0 SHEET 2 C 2 TYR A 407 ASN A 408 -1 O ASN A 408 N THR A 213 SHEET 1 D 5 ILE A 226 HIS A 228 0 SHEET 2 D 5 ALA A 400 VAL A 403 1 O VAL A 403 N ILE A 227 SHEET 3 D 5 ASN A 248 LEU A 252 1 N LEU A 252 O MET A 402 SHEET 4 D 5 ARG A 273 ILE A 277 1 O ILE A 277 N VAL A 251 SHEET 5 D 5 HIS A 354 LEU A 357 1 O LEU A 357 N LEU A 276 SHEET 1 E 3 ARG A 360 GLU A 366 0 SHEET 2 E 3 MET A 374 SER A 380 -1 O HIS A 377 N ARG A 364 SHEET 3 E 3 THR A 395 VAL A 398 -1 O LEU A 396 N ILE A 376 SITE 1 AC1 30 GLY A 46 GLY A 48 PRO A 49 ALA A 50 SITE 2 AC1 30 LEU A 82 GLU A 83 ARG A 84 GLN A 85 SITE 3 AC1 30 TRP A 90 HIS A 91 MET A 94 GLN A 102 SITE 4 AC1 30 ILE A 103 GLU A 166 GLU A 167 VAL A 168 SITE 5 AC1 30 ALA A 209 ILE A 210 GLY A 211 TYR A 407 SITE 6 AC1 30 SER A 466 LEU A 467 LEU A 468 HOH A 703 SITE 7 AC1 30 HOH A 738 HOH A 758 HOH A 796 HOH A 843 SITE 8 AC1 30 HOH A 883 HOH A 892 SITE 1 AC2 9 ILE A 103 LYS A 107 ASN A 293 PHE A 296 SITE 2 AC2 9 ASN A 323 SER A 469 HOH A 741 HOH A 800 SITE 3 AC2 9 HOH A 829 SITE 1 AC3 7 LYS A 128 ASP A 149 ARG A 152 TRP A 153 SITE 2 AC3 7 GLN A 156 PRO A 178 HOH A 876 SITE 1 AC4 5 LEU A 239 LEU A 240 LYS A 241 LYS A 245 SITE 2 AC4 5 TYR A 247 SITE 1 AC5 6 PHE A 291 GLU A 294 MET A 339 TYR A 340 SITE 2 AC5 6 ARG A 343 HOH A 878 SITE 1 AC6 5 GLU A 366 HIS A 367 HIS A 368 GLY A 369 SITE 2 AC6 5 HOH A 880 CRYST1 77.905 84.083 144.902 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012836 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011893 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006901 0.00000