HEADER DNA BINDING PROTEIN/INHIBITOR 16-DEC-13 4O24 TITLE DNA DOUBLE-STRAND BREAK REPAIR PATHWAY CHOICE IS DIRECTED BY DISTINCT TITLE 2 MRE11 NUCLEASE ACTIVITIES COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXONUCLEASE, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099; SOURCE 5 GENE: TM_1635; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA REPAIR DNA DOUBLE-STRAND BREAK REPAIR THERMOPHILIC MRE11 KEYWDS 2 NUCLEASE, DNA REPAIR DNA DOUBLE-STRAND BREAK REPAIR, DNA BINDING KEYWDS 3 PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.SHIBATA,D.MOIANI,A.S.ARVAI,J.PERRY,S.M.HARDING,M.GENOIS,R.MAITY, AUTHOR 2 S.ROSSUM-FIKKERT,A.KERTOKALIO,F.ROMOLI,A.ISMAIL,E.ISMALAJ, AUTHOR 3 E.PETRICCI,M.J.NEALE,R.G.BRISTOW,J.MASSON,C.WYMAN,P.A.JEGGO, AUTHOR 4 J.A.TAINER REVDAT 4 20-SEP-23 4O24 1 REMARK LINK REVDAT 3 19-FEB-20 4O24 1 COMPND SEQADV HETNAM FORMUL REVDAT 2 05-FEB-14 4O24 1 JRNL REVDAT 1 15-JAN-14 4O24 0 JRNL AUTH A.SHIBATA,D.MOIANI,A.S.ARVAI,J.PERRY,S.M.HARDING,M.M.GENOIS, JRNL AUTH 2 R.MAITY,S.VAN ROSSUM-FIKKERT,A.KERTOKALIO,F.ROMOLI,A.ISMAIL, JRNL AUTH 3 E.ISMALAJ,E.PETRICCI,M.J.NEALE,R.G.BRISTOW,J.Y.MASSON, JRNL AUTH 4 C.WYMAN,P.A.JEGGO,J.A.TAINER JRNL TITL DNA DOUBLE-STRAND BREAK REPAIR PATHWAY CHOICE IS DIRECTED BY JRNL TITL 2 DISTINCT MRE11 NUCLEASE ACTIVITIES. JRNL REF MOL.CELL V. 53 7 2014 JRNL REFN ISSN 1097-2765 JRNL PMID 24316220 JRNL DOI 10.1016/J.MOLCEL.2013.11.003 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 3 NUMBER OF REFLECTIONS : 34034 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1719 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.4822 - 5.2582 0.95 2951 155 0.1820 0.2554 REMARK 3 2 5.2582 - 4.1767 0.98 3015 159 0.1655 0.1913 REMARK 3 3 4.1767 - 3.6496 0.78 1981 104 0.1773 0.2629 REMARK 3 4 3.6496 - 3.3163 0.81 2439 130 0.2123 0.2462 REMARK 3 5 3.3163 - 3.0789 0.98 2995 154 0.2260 0.3127 REMARK 3 6 3.0789 - 2.8975 0.97 2930 157 0.2266 0.2830 REMARK 3 7 2.8975 - 2.7525 0.96 2917 155 0.2261 0.3008 REMARK 3 8 2.7525 - 2.6327 0.93 2773 146 0.2280 0.2970 REMARK 3 9 2.6327 - 2.5314 0.92 2801 149 0.2345 0.2828 REMARK 3 10 2.5314 - 2.4441 0.91 2771 149 0.2270 0.2869 REMARK 3 11 2.4441 - 2.3677 0.88 2625 149 0.2408 0.2817 REMARK 3 12 2.3677 - 2.3000 0.70 2117 112 0.2575 0.3209 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.20 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5302 REMARK 3 ANGLE : 0.878 7189 REMARK 3 CHIRALITY : 0.055 800 REMARK 3 PLANARITY : 0.002 926 REMARK 3 DIHEDRAL : 11.540 1957 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 2.2908 456.3559 100.2492 REMARK 3 T TENSOR REMARK 3 T11: 0.0815 T22: 0.1042 REMARK 3 T33: 0.1371 T12: 0.0133 REMARK 3 T13: -0.0001 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 0.1676 L22: 0.3041 REMARK 3 L33: 0.4123 L12: 0.0877 REMARK 3 L13: 0.0995 L23: -0.0954 REMARK 3 S TENSOR REMARK 3 S11: -0.0134 S12: -0.0181 S13: 0.0567 REMARK 3 S21: -0.0362 S22: -0.0568 S23: -0.0242 REMARK 3 S31: 0.0998 S32: -0.0120 S33: -0.0111 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4O24 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083945. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 12.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36412 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4NZV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6, VAPOR DIFFUSION, TEMPERATURE REMARK 280 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 56.76700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 ILE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 VAL B 1 REMARK 465 ILE B 2 REMARK 465 ASN B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A -6 CG1 CG2 CD1 REMARK 470 LYS A 5 CG CD CE NZ REMARK 470 ARG A 63 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 131 CE NZ REMARK 470 SER A 143 OG REMARK 470 GLU A 144 CG CD OE1 OE2 REMARK 470 LEU A 146 CG CD1 CD2 REMARK 470 ARG A 147 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 154 CZ NH1 NH2 REMARK 470 TYR A 189 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE A 192 CG1 CG2 CD1 REMARK 470 GLU A 193 CG CD OE1 OE2 REMARK 470 GLN A 194 CG CD OE1 NE2 REMARK 470 ARG A 196 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 278 NZ REMARK 470 LYS A 279 NZ REMARK 470 LEU B 4 CG CD1 CD2 REMARK 470 LYS B 5 CG CD CE NZ REMARK 470 LYS B 47 CE NZ REMARK 470 ARG B 63 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 100 CE NZ REMARK 470 LYS B 131 CE NZ REMARK 470 SER B 143 OG REMARK 470 GLU B 144 CG CD OE1 OE2 REMARK 470 LEU B 146 CG CD1 CD2 REMARK 470 ARG B 147 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 148 CG CD CE NZ REMARK 470 ASP B 152 CG OD1 OD2 REMARK 470 ARG B 154 CD NE CZ NH1 NH2 REMARK 470 TYR B 189 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE B 192 CG1 CG2 CD1 REMARK 470 GLU B 193 CG CD OE1 OE2 REMARK 470 GLN B 194 CG CD OE1 NE2 REMARK 470 ARG B 196 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 197 CD OE1 OE2 REMARK 470 LYS B 278 NZ REMARK 470 LYS B 279 NZ REMARK 470 ARG B 293 CZ NH1 NH2 REMARK 470 GLU B 316 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 25 -51.96 -125.02 REMARK 500 ARG A 26 91.56 -161.85 REMARK 500 ASN A 65 66.96 -153.73 REMARK 500 SER A 143 -129.88 51.01 REMARK 500 GLU A 144 -36.26 -33.31 REMARK 500 LEU A 146 41.78 -101.75 REMARK 500 ARG A 147 17.57 54.54 REMARK 500 GLU A 150 -118.49 56.58 REMARK 500 ASP A 173 -80.24 -124.22 REMARK 500 GLU A 193 -119.87 62.48 REMARK 500 ARG A 196 62.71 -163.15 REMARK 500 HIS A 216 -19.09 90.74 REMARK 500 ASP A 281 -158.40 -108.03 REMARK 500 SER A 307 82.41 -155.08 REMARK 500 LYS A 322 117.59 -160.75 REMARK 500 SER B 25 -64.86 -101.33 REMARK 500 ASN B 65 60.59 -156.41 REMARK 500 SER B 143 -107.78 56.89 REMARK 500 ARG B 147 31.84 -98.56 REMARK 500 GLU B 150 -38.25 69.73 REMARK 500 GLU B 172 -68.15 -104.52 REMARK 500 ASP B 173 -64.87 -102.17 REMARK 500 TYR B 189 75.76 50.23 REMARK 500 GLU B 193 -66.37 -141.02 REMARK 500 ARG B 196 -86.36 -143.32 REMARK 500 HIS B 216 -8.09 84.31 REMARK 500 ASP B 281 -169.92 -122.27 REMARK 500 ASP B 312 85.58 -64.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 14 OD1 REMARK 620 2 HIS A 16 NE2 114.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 58 OD1 REMARK 620 2 HIS A 180 NE2 101.4 REMARK 620 3 HIS A 216 ND1 114.3 128.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 14 OD1 REMARK 620 2 HIS B 16 NE2 109.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 58 OD1 REMARK 620 2 HIS B 180 NE2 104.3 REMARK 620 3 HIS B 216 ND1 125.0 127.5 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2Q0 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2Q0 B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NZV RELATED DB: PDB REMARK 900 MRE11 REMARK 900 RELATED ID: 4O43 RELATED DB: PDB REMARK 900 RELATED ID: 4O4K RELATED DB: PDB REMARK 900 RELATED ID: 4O5G RELATED DB: PDB DBREF 4O24 A 2 324 UNP Q9X1X0 Q9X1X0_THEMA 2 324 DBREF 4O24 B 2 324 UNP Q9X1X0 Q9X1X0_THEMA 2 324 SEQADV 4O24 GLY A -10 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 SER A -9 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 ASP A -8 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 LYS A -7 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 ILE A -6 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS A -5 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS A -4 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS A -3 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS A -2 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS A -1 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS A 0 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 VAL A 1 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 GLY B -10 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 SER B -9 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 ASP B -8 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 LYS B -7 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 ILE B -6 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS B -5 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS B -4 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS B -3 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS B -2 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS B -1 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 HIS B 0 UNP Q9X1X0 EXPRESSION TAG SEQADV 4O24 VAL B 1 UNP Q9X1X0 EXPRESSION TAG SEQRES 1 A 335 GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS VAL ILE SEQRES 2 A 335 ASN LEU LYS GLU LEU LYS ILE LEU HIS THR SER ASP TRP SEQRES 3 A 335 HIS LEU GLY VAL THR SER TRP THR SER SER ARG PRO VAL SEQRES 4 A 335 ASP ARG ARG GLU GLU LEU LYS LYS ALA LEU ASP LYS VAL SEQRES 5 A 335 VAL GLU GLU ALA GLU LYS ARG GLU VAL ASP LEU ILE LEU SEQRES 6 A 335 LEU THR GLY ASP LEU LEU HIS SER ARG ASN ASN PRO SER SEQRES 7 A 335 VAL VAL ALA LEU HIS ASP LEU LEU ASP TYR LEU LYS ARG SEQRES 8 A 335 MET MET ARG THR ALA PRO VAL VAL VAL LEU PRO GLY ASN SEQRES 9 A 335 HIS ASP TRP LYS GLY LEU LYS LEU PHE GLY ASN PHE VAL SEQRES 10 A 335 THR SER ILE SER SER ASP ILE THR PHE VAL MET SER PHE SEQRES 11 A 335 GLU PRO VAL ASP VAL GLU ALA LYS ARG GLY GLN LYS VAL SEQRES 12 A 335 ARG ILE LEU PRO PHE PRO TYR PRO ASP GLU SER GLU ALA SEQRES 13 A 335 LEU ARG LYS ASN GLU GLY ASP PHE ARG PHE PHE LEU GLU SEQRES 14 A 335 SER ARG LEU ASN LYS LEU TYR GLU GLU ALA LEU LYS LYS SEQRES 15 A 335 GLU ASP PHE ALA ILE PHE MET GLY HIS PHE THR VAL GLU SEQRES 16 A 335 GLY LEU ALA GLY TYR ALA GLY ILE GLU GLN GLY ARG GLU SEQRES 17 A 335 ILE ILE ILE ASN ARG ALA LEU ILE PRO SER VAL VAL ASP SEQRES 18 A 335 TYR ALA ALA LEU GLY HIS ILE HIS SER PHE ARG GLU ILE SEQRES 19 A 335 GLN LYS GLN PRO LEU THR ILE TYR PRO GLY SER LEU ILE SEQRES 20 A 335 ARG ILE ASP PHE GLY GLU GLU ALA ASP GLU LYS GLY ALA SEQRES 21 A 335 VAL PHE VAL GLU LEU LYS ARG GLY GLU PRO PRO ARG TYR SEQRES 22 A 335 GLU ARG ILE ASP ALA SER PRO LEU PRO LEU LYS THR LEU SEQRES 23 A 335 TYR TYR LYS LYS ILE ASP THR SER ALA LEU LYS SER ILE SEQRES 24 A 335 ARG ASP PHE CYS ARG ASN PHE PRO GLY TYR VAL ARG VAL SEQRES 25 A 335 VAL TYR GLU GLU ASP SER GLY ILE LEU PRO ASP LEU MET SEQRES 26 A 335 GLY GLU ILE ASP ASN LEU VAL LYS ILE GLU SEQRES 1 B 335 GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS VAL ILE SEQRES 2 B 335 ASN LEU LYS GLU LEU LYS ILE LEU HIS THR SER ASP TRP SEQRES 3 B 335 HIS LEU GLY VAL THR SER TRP THR SER SER ARG PRO VAL SEQRES 4 B 335 ASP ARG ARG GLU GLU LEU LYS LYS ALA LEU ASP LYS VAL SEQRES 5 B 335 VAL GLU GLU ALA GLU LYS ARG GLU VAL ASP LEU ILE LEU SEQRES 6 B 335 LEU THR GLY ASP LEU LEU HIS SER ARG ASN ASN PRO SER SEQRES 7 B 335 VAL VAL ALA LEU HIS ASP LEU LEU ASP TYR LEU LYS ARG SEQRES 8 B 335 MET MET ARG THR ALA PRO VAL VAL VAL LEU PRO GLY ASN SEQRES 9 B 335 HIS ASP TRP LYS GLY LEU LYS LEU PHE GLY ASN PHE VAL SEQRES 10 B 335 THR SER ILE SER SER ASP ILE THR PHE VAL MET SER PHE SEQRES 11 B 335 GLU PRO VAL ASP VAL GLU ALA LYS ARG GLY GLN LYS VAL SEQRES 12 B 335 ARG ILE LEU PRO PHE PRO TYR PRO ASP GLU SER GLU ALA SEQRES 13 B 335 LEU ARG LYS ASN GLU GLY ASP PHE ARG PHE PHE LEU GLU SEQRES 14 B 335 SER ARG LEU ASN LYS LEU TYR GLU GLU ALA LEU LYS LYS SEQRES 15 B 335 GLU ASP PHE ALA ILE PHE MET GLY HIS PHE THR VAL GLU SEQRES 16 B 335 GLY LEU ALA GLY TYR ALA GLY ILE GLU GLN GLY ARG GLU SEQRES 17 B 335 ILE ILE ILE ASN ARG ALA LEU ILE PRO SER VAL VAL ASP SEQRES 18 B 335 TYR ALA ALA LEU GLY HIS ILE HIS SER PHE ARG GLU ILE SEQRES 19 B 335 GLN LYS GLN PRO LEU THR ILE TYR PRO GLY SER LEU ILE SEQRES 20 B 335 ARG ILE ASP PHE GLY GLU GLU ALA ASP GLU LYS GLY ALA SEQRES 21 B 335 VAL PHE VAL GLU LEU LYS ARG GLY GLU PRO PRO ARG TYR SEQRES 22 B 335 GLU ARG ILE ASP ALA SER PRO LEU PRO LEU LYS THR LEU SEQRES 23 B 335 TYR TYR LYS LYS ILE ASP THR SER ALA LEU LYS SER ILE SEQRES 24 B 335 ARG ASP PHE CYS ARG ASN PHE PRO GLY TYR VAL ARG VAL SEQRES 25 B 335 VAL TYR GLU GLU ASP SER GLY ILE LEU PRO ASP LEU MET SEQRES 26 B 335 GLY GLU ILE ASP ASN LEU VAL LYS ILE GLU HET 2Q0 A 401 19 HET MN A 402 1 HET MN A 403 1 HET 2Q0 B 401 19 HET MN B 402 1 HET MN B 403 1 HETNAM 2Q0 (5~{Z})-5-[(4-HYDROXYPHENYL)METHYLIDENE]-3-(2- HETNAM 2 2Q0 METHYLPROPYL)-2-SULFANYLIDENE-1,3-THIAZOLIDIN-4-ONE HETNAM MN MANGANESE (II) ION FORMUL 3 2Q0 2(C14 H15 N O2 S2) FORMUL 4 MN 4(MN 2+) FORMUL 9 HOH *103(H2 O) HELIX 1 1 ARG A 30 GLU A 49 1 20 HELIX 2 2 SER A 67 ALA A 85 1 19 HELIX 3 3 LYS A 97 SER A 110 1 14 HELIX 4 4 GLU A 150 LEU A 169 1 20 HELIX 5 5 ASN A 201 ILE A 205 5 5 HELIX 6 6 ASP A 239 GLU A 243 5 5 HELIX 7 7 ASP A 281 ASN A 294 1 14 HELIX 8 8 ASP A 312 ILE A 317 1 6 HELIX 9 9 ARG B 30 ARG B 48 1 19 HELIX 10 10 SER B 67 ARG B 83 1 17 HELIX 11 11 LYS B 97 SER B 110 1 14 HELIX 12 12 GLU B 150 LEU B 169 1 20 HELIX 13 13 ASN B 201 ILE B 205 5 5 HELIX 14 14 ASP B 239 GLU B 243 5 5 HELIX 15 15 ASP B 281 ASN B 294 1 14 SHEET 1 A 6 ILE A 113 PHE A 115 0 SHEET 2 A 6 VAL A 87 VAL A 89 1 N VAL A 89 O THR A 114 SHEET 3 A 6 LEU A 52 THR A 56 1 N ILE A 53 O VAL A 88 SHEET 4 A 6 GLU A 6 SER A 13 1 N LEU A 10 O LEU A 54 SHEET 5 A 6 GLY A 248 LYS A 255 -1 O VAL A 252 N ILE A 9 SHEET 6 A 6 ARG A 261 ASP A 266 -1 O GLU A 263 N PHE A 251 SHEET 1 B 2 THR A 20 SER A 21 0 SHEET 2 B 2 VAL A 28 ASP A 29 -1 O VAL A 28 N SER A 21 SHEET 1 C 6 VAL A 122 GLU A 125 0 SHEET 2 C 6 LYS A 131 PHE A 137 -1 O VAL A 132 N VAL A 124 SHEET 3 C 6 PHE A 174 GLY A 179 1 O MET A 178 N PHE A 137 SHEET 4 C 6 TYR A 211 LEU A 214 1 O ALA A 213 N PHE A 177 SHEET 5 C 6 THR A 229 TYR A 231 1 O ILE A 230 N ALA A 212 SHEET 6 C 6 ARG A 221 GLN A 224 -1 N ARG A 221 O TYR A 231 SHEET 1 D 2 THR A 182 VAL A 183 0 SHEET 2 D 2 ILE A 199 ILE A 200 1 O ILE A 200 N THR A 182 SHEET 1 E 3 LEU A 272 TYR A 277 0 SHEET 2 E 3 TYR A 298 TYR A 303 1 O VAL A 302 N LEU A 275 SHEET 3 E 3 LEU A 320 LYS A 322 1 O LYS A 322 N VAL A 301 SHEET 1 F 6 ILE B 113 PHE B 115 0 SHEET 2 F 6 VAL B 87 VAL B 89 1 N VAL B 89 O THR B 114 SHEET 3 F 6 LEU B 52 THR B 56 1 N ILE B 53 O VAL B 88 SHEET 4 F 6 GLU B 6 SER B 13 1 N LEU B 10 O LEU B 54 SHEET 5 F 6 GLY B 248 LYS B 255 -1 O VAL B 252 N ILE B 9 SHEET 6 F 6 ARG B 261 ASP B 266 -1 O ILE B 265 N ALA B 249 SHEET 1 G 2 THR B 20 SER B 21 0 SHEET 2 G 2 VAL B 28 ASP B 29 -1 O VAL B 28 N SER B 21 SHEET 1 H 6 VAL B 122 GLU B 125 0 SHEET 2 H 6 LYS B 131 PHE B 137 -1 O ILE B 134 N VAL B 122 SHEET 3 H 6 PHE B 174 GLY B 179 1 O ILE B 176 N LEU B 135 SHEET 4 H 6 TYR B 211 LEU B 214 1 O ALA B 213 N PHE B 177 SHEET 5 H 6 THR B 229 TYR B 231 1 O ILE B 230 N LEU B 214 SHEET 6 H 6 ARG B 221 GLN B 224 -1 N ARG B 221 O TYR B 231 SHEET 1 I 2 THR B 182 VAL B 183 0 SHEET 2 I 2 ILE B 199 ILE B 200 1 O ILE B 200 N THR B 182 SHEET 1 J 3 LEU B 272 LYS B 279 0 SHEET 2 J 3 TYR B 298 GLU B 305 1 O ARG B 300 N LYS B 273 SHEET 3 J 3 LEU B 320 GLU B 324 1 O LYS B 322 N VAL B 301 LINK OD1 ASP A 14 MN MN A 403 1555 1555 2.17 LINK NE2 HIS A 16 MN MN A 403 1555 1555 2.53 LINK OD1 ASP A 58 MN MN A 402 1555 1555 2.53 LINK NE2 HIS A 180 MN MN A 402 1555 1555 1.93 LINK ND1 HIS A 216 MN MN A 402 1555 1555 2.62 LINK OD1 ASP B 14 MN MN B 403 1555 1555 2.44 LINK NE2 HIS B 16 MN MN B 403 1555 1555 2.30 LINK OD1 ASP B 58 MN MN B 402 1555 1555 2.05 LINK NE2 HIS B 180 MN MN B 402 1555 1555 2.01 LINK ND1 HIS B 216 MN MN B 402 1555 1555 2.43 CISPEP 1 GLU A 142 SER A 143 0 -4.36 CISPEP 2 ALA A 145 LEU A 146 0 4.21 CISPEP 3 LYS A 148 ASN A 149 0 -1.82 CISPEP 4 ALA A 187 GLY A 188 0 0.09 CISPEP 5 TYR A 189 ALA A 190 0 -0.06 CISPEP 6 ILE A 192 GLU A 193 0 -1.16 CISPEP 7 GLU A 193 GLN A 194 0 0.21 CISPEP 8 GLN A 194 GLY A 195 0 -9.25 CISPEP 9 GLN A 226 PRO A 227 0 -2.15 CISPEP 10 GLU B 142 SER B 143 0 -3.42 CISPEP 11 TYR B 189 ALA B 190 0 -2.26 CISPEP 12 ILE B 192 GLU B 193 0 -6.68 CISPEP 13 GLU B 193 GLN B 194 0 -5.97 CISPEP 14 GLN B 194 GLY B 195 0 -4.30 CISPEP 15 GLY B 195 ARG B 196 0 -4.06 CISPEP 16 GLN B 226 PRO B 227 0 -1.41 SITE 1 AC1 8 ASN A 64 PRO A 66 LEU A 71 LEU A 75 SITE 2 AC1 8 TRP A 96 LEU A 99 PHE A 115 PHE B 102 SITE 1 AC2 9 PHE A 102 ARG B 63 ASN B 64 PRO B 66 SITE 2 AC2 9 LEU B 71 LEU B 74 HIS B 94 LEU B 99 SITE 3 AC2 9 PHE B 115 CRYST1 48.183 113.534 81.563 90.00 100.64 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020754 0.000000 0.003898 0.00000 SCALE2 0.000000 0.008808 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012475 0.00000