HEADER TRANSFERASE 17-DEC-13 4O2Z TITLE CRYSTAL STRUCTURE OF MPK3 FROM LEISHMANIA DONOVANI, LDBPK_100540 IN TITLE 2 THE PRESENCE OF NVP-BBT594 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 3, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA DONOVANI; SOURCE 3 ORGANISM_TAXID: 981087; SOURCE 4 STRAIN: BPK282A1; SOURCE 5 GENE: LDBPK_100540; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-V2R-PACYC LAMP; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15-MHL KEYWDS NEGLECTED DISEASE, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.K.WERNIMONT,J.R.WALKER,A.HUTCHINSON,P.LOPPNAU,A.M.EDWARDS, AUTHOR 2 C.H.ARROWSMITH,C.BOUNTRA,R.HUI,M.MANGOS,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 3 20-SEP-23 4O2Z 1 REMARK SEQADV REVDAT 2 22-NOV-17 4O2Z 1 REMARK REVDAT 1 22-JAN-14 4O2Z 0 JRNL AUTH A.K.WERNIMONT,J.R.WALKER,A.HUTCHINSON,P.LOPPNAU,A.M.EDWARDS, JRNL AUTH 2 C.H.ARROWSMITH,C.BOUNTRA,R.HUI,M.MANGOS, JRNL AUTH 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL CRYSTAL STRUCTURE OF MPK3 FROM LEISHMANIA DONOVANI, JRNL TITL 2 LDBPK_100540 IN THE PRESENCE OF NVP-BBT594 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 803 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.90 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.87 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2834 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2675 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2701 REMARK 3 BIN R VALUE (WORKING SET) : 0.2672 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.69 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 133 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2813 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 8 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 100.0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 103.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -15.09330 REMARK 3 B22 (A**2) : -15.09330 REMARK 3 B33 (A**2) : 30.18650 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.586 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.515 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.915 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.904 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2933 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4009 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 964 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 67 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 452 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2933 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 377 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3212 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.88 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 1.73 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.89 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -10.8651 -12.5208 -23.4539 REMARK 3 T TENSOR REMARK 3 T11: -0.1245 T22: -0.0764 REMARK 3 T33: -0.2036 T12: 0.1876 REMARK 3 T13: -0.0819 T23: -0.0450 REMARK 3 L TENSOR REMARK 3 L11: 2.0496 L22: 1.6619 REMARK 3 L33: 2.8963 L12: -0.2943 REMARK 3 L13: -0.7017 L23: 0.5002 REMARK 3 S TENSOR REMARK 3 S11: -0.3797 S12: -0.1202 S13: -0.1071 REMARK 3 S21: 0.0379 S22: 0.4033 S23: -0.1506 REMARK 3 S31: -0.0854 S32: 0.0351 S33: -0.0237 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4O2Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000083976. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.2.14, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16037 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.710 REMARK 200 RESOLUTION RANGE LOW (A) : 49.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 0.01500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.5 REMARK 200 STARTING MODEL: FFAS03 ALL ATOM MODEL OF 3GCP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRATE, 0.5 M AMMONIUM SULFATE, REMARK 280 1.0 M LITHIUM SULFATE, 1 MM NVP-BBT594, PH 5.6, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.57050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 43.57050 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 147.55000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.57050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 73.77500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.57050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 221.32500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.57050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 221.32500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.57050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 73.77500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 43.57050 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 43.57050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 147.55000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 43.57050 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 43.57050 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 147.55000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 43.57050 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 221.32500 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 43.57050 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 73.77500 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 43.57050 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 73.77500 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 43.57050 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 221.32500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 43.57050 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 43.57050 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 147.55000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 ARG A 11 REMARK 465 GLU A 12 REMARK 465 ASP A 201 REMARK 465 VAL A 202 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 13 CG OD1 ND2 REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 SER A 45 OG REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 ASP A 80 CG OD1 OD2 REMARK 470 ARG A 83 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 89 CG CD CE NZ REMARK 470 LYS A 117 CG CD CE NZ REMARK 470 ARG A 118 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 119 CG CD OE1 OE2 REMARK 470 ARG A 142 CG CD NE CZ NH1 NH2 REMARK 470 SER A 143 OG REMARK 470 SER A 197 OG REMARK 470 ARG A 198 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 200 CG1 CG2 REMARK 470 GLU A 206 CG CD OE1 OE2 REMARK 470 LEU A 207 CG CD1 CD2 REMARK 470 ASP A 209 CG OD1 OD2 REMARK 470 GLU A 224 CG CD OE1 OE2 REMARK 470 LYS A 248 CE NZ REMARK 470 ARG A 254 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 261 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 278 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 279 CG CD OE1 OE2 REMARK 470 SER A 291 OG REMARK 470 LYS A 296 CG CD CE NZ REMARK 470 LYS A 313 NZ REMARK 470 ARG A 366 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 134 -57.51 -28.59 REMARK 500 ARG A 174 -16.42 62.72 REMARK 500 ASP A 193 82.41 -155.91 REMARK 500 ARG A 198 56.24 -92.36 REMARK 500 TRP A 315 39.10 -99.03 REMARK 500 ASP A 342 46.96 -98.81 REMARK 500 GLU A 343 83.75 -158.52 REMARK 500 SER A 356 59.13 -103.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 046 A 401 DBREF 4O2Z A 19 377 UNP E9BA99 E9BA99_LEIDB 5 363 SEQADV 4O2Z MET A 1 UNP E9BA99 INITIATING METHIONINE SEQADV 4O2Z HIS A 2 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z HIS A 3 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z HIS A 4 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z HIS A 5 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z HIS A 6 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z HIS A 7 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z SER A 8 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z SER A 9 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z GLY A 10 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z ARG A 11 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z GLU A 12 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z ASN A 13 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z LEU A 14 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z TYR A 15 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z PHE A 16 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z GLN A 17 UNP E9BA99 EXPRESSION TAG SEQADV 4O2Z GLY A 18 UNP E9BA99 EXPRESSION TAG SEQRES 1 A 377 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 377 LEU TYR PHE GLN GLY ASN GLN GLU LEU SER VAL PRO LYS SEQRES 3 A 377 ILE VAL GLY ASP PHE LYS VAL TYR ASN VAL SER GLY SER SEQRES 4 A 377 PRO PHE GLU VAL PRO SER LYS TYR THR LEU LEU LYS ILE SEQRES 5 A 377 LEU GLY MET GLY ALA TYR GLY ILE ALA CYS SER CYS LEU SEQRES 6 A 377 ASP GLY ASP THR GLY GLU LYS VAL SER ILE LYS LYS CYS SEQRES 7 A 377 ARG ASP VAL PHE ARG ASP VAL GLU ASP GLY LYS ARG VAL SEQRES 8 A 377 LEU ARG GLU ILE ASP MET MET ARG PHE PHE HIS HIS GLU SEQRES 9 A 377 ASN LEU LEU ASN VAL VAL ASN ILE LEU PRO PRO LEU LYS SEQRES 10 A 377 ARG GLU TYR HIS SER PHE GLU ASP VAL TYR VAL VAL THR SEQRES 11 A 377 PRO LEU MET ASP VAL ASP MET ASN VAL VAL LEU ARG SER SEQRES 12 A 377 ARG GLN VAL LEU GLU GLU SER HIS MET GLN TYR PHE VAL SEQRES 13 A 377 TYR GLN ILE LEU ARG GLY LEU LYS TYR LEU HIS SER ALA SEQRES 14 A 377 ASN VAL ALA HIS ARG ASP LEU LYS PRO ALA ASN LEU VAL SEQRES 15 A 377 THR ASN ILE SER CYS GLU LEU LYS ILE ILE ASP PHE GLY SEQRES 16 A 377 LEU SER ARG SER VAL ASP VAL PRO TYR SER GLU LEU THR SEQRES 17 A 377 ASP TYR VAL ILE THR ARG TRP TYR ARG PRO PRO GLU LEU SEQRES 18 A 377 LEU LEU GLU ASN THR ASN TYR SER THR ALA VAL ASP ILE SEQRES 19 A 377 TRP SER VAL GLY CYS ILE PHE ALA GLU MET TYR ASN ARG SEQRES 20 A 377 LYS PRO VAL PHE PRO GLY ARG ASN THR MET ASP GLN LEU SEQRES 21 A 377 ARG MET ILE ALA GLN HIS ILE GLY LYS PRO PRO ALA SER SEQRES 22 A 377 ILE VAL GLU HIS ARG GLU ALA LEU GLU LYS LEU ASN GLU SEQRES 23 A 377 LEU PRO ASP GLY SER LEU ASN ILE PRO LYS LEU VAL PRO SEQRES 24 A 377 GLY LEU ALA GLY ASN THR GLU GLY ILE ASP PHE LEU SER SEQRES 25 A 377 LYS MET TRP THR LEU ASP PRO SER LYS ARG PRO THR ALA SEQRES 26 A 377 ALA ASP MET LEU ALA HIS PRO TYR LEU ALA HIS LEU HIS SEQRES 27 A 377 ASP GLU GLU ASP GLU PRO THR CYS PRO CYS PRO PHE LEU SEQRES 28 A 377 TRP ALA HIS GLU SER THR PRO MET GLY VAL SER GLU LEU SEQRES 29 A 377 ARG ARG ALA PHE TRP ALA ASP ILE VAL ASP TYR ASN PRO HET 046 A 401 41 HETNAM 046 5-{[6-(ACETYLAMINO)PYRIMIDIN-4-YL]OXY}-N-{4-[(4- HETNAM 2 046 METHYLPIPERAZIN-1-YL)METHYL]-3-(TRIFLUOROMETHYL) HETNAM 3 046 PHENYL}-2,3-DIHYDRO-1H-INDOLE-1-CARBOXAMIDE FORMUL 2 046 C28 H30 F3 N7 O3 FORMUL 3 HOH *8(H2 O) HELIX 1 1 ASP A 84 PHE A 101 1 18 HELIX 2 2 MET A 137 SER A 143 1 7 HELIX 3 3 GLU A 148 ALA A 169 1 22 HELIX 4 4 LYS A 177 ALA A 179 5 3 HELIX 5 5 TYR A 204 LEU A 207 5 4 HELIX 6 6 THR A 208 ARG A 214 1 7 HELIX 7 7 TRP A 215 ARG A 217 5 3 HELIX 8 8 PRO A 218 LEU A 223 1 6 HELIX 9 9 THR A 230 ARG A 247 1 18 HELIX 10 10 ASN A 255 ILE A 267 1 13 HELIX 11 11 HIS A 277 GLU A 282 1 6 HELIX 12 12 LYS A 283 GLU A 286 5 4 HELIX 13 13 ASN A 293 VAL A 298 1 6 HELIX 14 14 PRO A 299 ALA A 302 5 4 HELIX 15 15 ASN A 304 TRP A 315 1 12 HELIX 16 16 THR A 324 ALA A 330 1 7 HELIX 17 17 HIS A 331 ALA A 335 5 5 HELIX 18 18 ASP A 339 GLU A 343 5 5 HELIX 19 19 GLY A 360 ASN A 376 1 17 SHEET 1 A 3 LYS A 26 VAL A 28 0 SHEET 2 A 3 PHE A 31 VAL A 36 -1 O VAL A 33 N LYS A 26 SHEET 3 A 3 SER A 39 PRO A 44 -1 O SER A 39 N VAL A 36 SHEET 1 B 5 TYR A 47 MET A 55 0 SHEET 2 B 5 ILE A 60 ASP A 66 -1 O ALA A 61 N LEU A 53 SHEET 3 B 5 LYS A 72 CYS A 78 -1 O LYS A 77 N ILE A 60 SHEET 4 B 5 VAL A 126 PRO A 131 -1 O THR A 130 N SER A 74 SHEET 5 B 5 ASN A 111 LEU A 113 -1 N ASN A 111 O VAL A 129 SHEET 1 C 3 VAL A 135 ASP A 136 0 SHEET 2 C 3 LEU A 181 THR A 183 -1 O THR A 183 N VAL A 135 SHEET 3 C 3 LYS A 190 ILE A 191 -1 O LYS A 190 N VAL A 182 SITE 1 AC1 16 SER A 74 GLU A 94 MET A 97 MET A 98 SITE 2 AC1 16 LEU A 107 THR A 130 PRO A 131 MET A 133 SITE 3 AC1 16 ASP A 134 ALA A 172 HIS A 173 ASP A 175 SITE 4 AC1 16 ILE A 191 ASP A 193 PHE A 194 SER A 356 CRYST1 87.141 87.141 295.100 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011476 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011476 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003389 0.00000