data_4O3Y # _entry.id 4O3Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4O3Y RCSB RCSB084011 WWPDB D_1000084011 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4O3W . unspecified PDB 4O3X . unspecified PDB 4O3Z . unspecified PDB 4O49 . unspecified PDB 4O4U . unspecified PDB 4O4X . unspecified # _pdbx_database_status.entry_id 4O3Y _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-12-18 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Calmettes, C.' 1 'Yu, R.H.' 2 'Schryvers, A.B.' 3 'Moraes, T.F.' 4 # _citation.id primary _citation.title 'Nonbinding site-directed mutants of transferrin binding protein B exhibit enhanced immunogenicity and protective capabilities.' _citation.journal_abbrev Infect.Immun. _citation.journal_volume 83 _citation.page_first 1030 _citation.page_last 1038 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 0019-9567 _citation.journal_id_CSD 999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25547790 _citation.pdbx_database_id_DOI 10.1128/IAI.02572-14 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Frandoloso, R.' 1 primary 'Martinez-Martinez, S.' 2 primary 'Calmettes, C.' 3 primary 'Fegan, J.' 4 primary 'Costa, E.' 5 primary 'Curran, D.' 6 primary 'Yu, R.H.' 7 primary 'Gutierrez-Martin, C.B.' 8 primary 'Rodriguez-Ferri, E.F.' 9 primary 'Moraes, T.F.' 10 primary 'Schryvers, A.B.' 11 # _cell.length_a 134.700 _cell.length_b 149.200 _cell.length_c 91.040 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4O3Y _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 4O3Y _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 20 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Outer membrane protein; transferrin-binding protein' 57468.684 1 ? R179E 'UNP residues 25-547' ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 3 ? ? ? ? 4 water nat water 18.015 67 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSFDLDDVQPNKAVEPEKTKVNYTDEETQKRKKEELDKLMEPALGYVTKIPVNIPSVRKTEISEIDTVTDESLSLVPNED KLRTIANENYGSVVTKSGSNTMNFVRSGYTIDVVHYGLRDKGYVYYKGVHPSKELPKGNIIVYQGEWDFTSNADLDAKRP NYNPEFNGYGAGQEVGVTSADAKERTYISKFNIDFSNKKLNGQLLTKTKENQEKLRYTVEANISGNRFRGKATATDKTDP ILGKDSEHLEGGLYGPKSEELAGKFVAHDKSLFAVFSGKRGNDVLETVKIIDASKIDLTTFESSELNNFGNANVLIIDGQ KIDLAGADFKNRKTVDINGKTMVAIACCSNLEYMKFGQLWQKEGEQTKDNSLFLQGERTATDKIPVGGNYKYVGTWDALV SKGTNWVAEADNNRESGYRSEFDVNFGDKKVSGKLFDKGGIVPVFMINADIKGNGFTGTANTTDTGFALDSGSSQHGNAV FSDIKVNGGFYGPTAGELGGQFHHKSDNGSVGAVFGAKRQIEK ; _entity_poly.pdbx_seq_one_letter_code_can ;GSFDLDDVQPNKAVEPEKTKVNYTDEETQKRKKEELDKLMEPALGYVTKIPVNIPSVRKTEISEIDTVTDESLSLVPNED KLRTIANENYGSVVTKSGSNTMNFVRSGYTIDVVHYGLRDKGYVYYKGVHPSKELPKGNIIVYQGEWDFTSNADLDAKRP NYNPEFNGYGAGQEVGVTSADAKERTYISKFNIDFSNKKLNGQLLTKTKENQEKLRYTVEANISGNRFRGKATATDKTDP ILGKDSEHLEGGLYGPKSEELAGKFVAHDKSLFAVFSGKRGNDVLETVKIIDASKIDLTTFESSELNNFGNANVLIIDGQ KIDLAGADFKNRKTVDINGKTMVAIACCSNLEYMKFGQLWQKEGEQTKDNSLFLQGERTATDKIPVGGNYKYVGTWDALV SKGTNWVAEADNNRESGYRSEFDVNFGDKKVSGKLFDKGGIVPVFMINADIKGNGFTGTANTTDTGFALDSGSSQHGNAV FSDIKVNGGFYGPTAGELGGQFHHKSDNGSVGAVFGAKRQIEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PHE n 1 4 ASP n 1 5 LEU n 1 6 ASP n 1 7 ASP n 1 8 VAL n 1 9 GLN n 1 10 PRO n 1 11 ASN n 1 12 LYS n 1 13 ALA n 1 14 VAL n 1 15 GLU n 1 16 PRO n 1 17 GLU n 1 18 LYS n 1 19 THR n 1 20 LYS n 1 21 VAL n 1 22 ASN n 1 23 TYR n 1 24 THR n 1 25 ASP n 1 26 GLU n 1 27 GLU n 1 28 THR n 1 29 GLN n 1 30 LYS n 1 31 ARG n 1 32 LYS n 1 33 LYS n 1 34 GLU n 1 35 GLU n 1 36 LEU n 1 37 ASP n 1 38 LYS n 1 39 LEU n 1 40 MET n 1 41 GLU n 1 42 PRO n 1 43 ALA n 1 44 LEU n 1 45 GLY n 1 46 TYR n 1 47 VAL n 1 48 THR n 1 49 LYS n 1 50 ILE n 1 51 PRO n 1 52 VAL n 1 53 ASN n 1 54 ILE n 1 55 PRO n 1 56 SER n 1 57 VAL n 1 58 ARG n 1 59 LYS n 1 60 THR n 1 61 GLU n 1 62 ILE n 1 63 SER n 1 64 GLU n 1 65 ILE n 1 66 ASP n 1 67 THR n 1 68 VAL n 1 69 THR n 1 70 ASP n 1 71 GLU n 1 72 SER n 1 73 LEU n 1 74 SER n 1 75 LEU n 1 76 VAL n 1 77 PRO n 1 78 ASN n 1 79 GLU n 1 80 ASP n 1 81 LYS n 1 82 LEU n 1 83 ARG n 1 84 THR n 1 85 ILE n 1 86 ALA n 1 87 ASN n 1 88 GLU n 1 89 ASN n 1 90 TYR n 1 91 GLY n 1 92 SER n 1 93 VAL n 1 94 VAL n 1 95 THR n 1 96 LYS n 1 97 SER n 1 98 GLY n 1 99 SER n 1 100 ASN n 1 101 THR n 1 102 MET n 1 103 ASN n 1 104 PHE n 1 105 VAL n 1 106 ARG n 1 107 SER n 1 108 GLY n 1 109 TYR n 1 110 THR n 1 111 ILE n 1 112 ASP n 1 113 VAL n 1 114 VAL n 1 115 HIS n 1 116 TYR n 1 117 GLY n 1 118 LEU n 1 119 ARG n 1 120 ASP n 1 121 LYS n 1 122 GLY n 1 123 TYR n 1 124 VAL n 1 125 TYR n 1 126 TYR n 1 127 LYS n 1 128 GLY n 1 129 VAL n 1 130 HIS n 1 131 PRO n 1 132 SER n 1 133 LYS n 1 134 GLU n 1 135 LEU n 1 136 PRO n 1 137 LYS n 1 138 GLY n 1 139 ASN n 1 140 ILE n 1 141 ILE n 1 142 VAL n 1 143 TYR n 1 144 GLN n 1 145 GLY n 1 146 GLU n 1 147 TRP n 1 148 ASP n 1 149 PHE n 1 150 THR n 1 151 SER n 1 152 ASN n 1 153 ALA n 1 154 ASP n 1 155 LEU n 1 156 ASP n 1 157 ALA n 1 158 LYS n 1 159 ARG n 1 160 PRO n 1 161 ASN n 1 162 TYR n 1 163 ASN n 1 164 PRO n 1 165 GLU n 1 166 PHE n 1 167 ASN n 1 168 GLY n 1 169 TYR n 1 170 GLY n 1 171 ALA n 1 172 GLY n 1 173 GLN n 1 174 GLU n 1 175 VAL n 1 176 GLY n 1 177 VAL n 1 178 THR n 1 179 SER n 1 180 ALA n 1 181 ASP n 1 182 ALA n 1 183 LYS n 1 184 GLU n 1 185 ARG n 1 186 THR n 1 187 TYR n 1 188 ILE n 1 189 SER n 1 190 LYS n 1 191 PHE n 1 192 ASN n 1 193 ILE n 1 194 ASP n 1 195 PHE n 1 196 SER n 1 197 ASN n 1 198 LYS n 1 199 LYS n 1 200 LEU n 1 201 ASN n 1 202 GLY n 1 203 GLN n 1 204 LEU n 1 205 LEU n 1 206 THR n 1 207 LYS n 1 208 THR n 1 209 LYS n 1 210 GLU n 1 211 ASN n 1 212 GLN n 1 213 GLU n 1 214 LYS n 1 215 LEU n 1 216 ARG n 1 217 TYR n 1 218 THR n 1 219 VAL n 1 220 GLU n 1 221 ALA n 1 222 ASN n 1 223 ILE n 1 224 SER n 1 225 GLY n 1 226 ASN n 1 227 ARG n 1 228 PHE n 1 229 ARG n 1 230 GLY n 1 231 LYS n 1 232 ALA n 1 233 THR n 1 234 ALA n 1 235 THR n 1 236 ASP n 1 237 LYS n 1 238 THR n 1 239 ASP n 1 240 PRO n 1 241 ILE n 1 242 LEU n 1 243 GLY n 1 244 LYS n 1 245 ASP n 1 246 SER n 1 247 GLU n 1 248 HIS n 1 249 LEU n 1 250 GLU n 1 251 GLY n 1 252 GLY n 1 253 LEU n 1 254 TYR n 1 255 GLY n 1 256 PRO n 1 257 LYS n 1 258 SER n 1 259 GLU n 1 260 GLU n 1 261 LEU n 1 262 ALA n 1 263 GLY n 1 264 LYS n 1 265 PHE n 1 266 VAL n 1 267 ALA n 1 268 HIS n 1 269 ASP n 1 270 LYS n 1 271 SER n 1 272 LEU n 1 273 PHE n 1 274 ALA n 1 275 VAL n 1 276 PHE n 1 277 SER n 1 278 GLY n 1 279 LYS n 1 280 ARG n 1 281 GLY n 1 282 ASN n 1 283 ASP n 1 284 VAL n 1 285 LEU n 1 286 GLU n 1 287 THR n 1 288 VAL n 1 289 LYS n 1 290 ILE n 1 291 ILE n 1 292 ASP n 1 293 ALA n 1 294 SER n 1 295 LYS n 1 296 ILE n 1 297 ASP n 1 298 LEU n 1 299 THR n 1 300 THR n 1 301 PHE n 1 302 GLU n 1 303 SER n 1 304 SER n 1 305 GLU n 1 306 LEU n 1 307 ASN n 1 308 ASN n 1 309 PHE n 1 310 GLY n 1 311 ASN n 1 312 ALA n 1 313 ASN n 1 314 VAL n 1 315 LEU n 1 316 ILE n 1 317 ILE n 1 318 ASP n 1 319 GLY n 1 320 GLN n 1 321 LYS n 1 322 ILE n 1 323 ASP n 1 324 LEU n 1 325 ALA n 1 326 GLY n 1 327 ALA n 1 328 ASP n 1 329 PHE n 1 330 LYS n 1 331 ASN n 1 332 ARG n 1 333 LYS n 1 334 THR n 1 335 VAL n 1 336 ASP n 1 337 ILE n 1 338 ASN n 1 339 GLY n 1 340 LYS n 1 341 THR n 1 342 MET n 1 343 VAL n 1 344 ALA n 1 345 ILE n 1 346 ALA n 1 347 CYS n 1 348 CYS n 1 349 SER n 1 350 ASN n 1 351 LEU n 1 352 GLU n 1 353 TYR n 1 354 MET n 1 355 LYS n 1 356 PHE n 1 357 GLY n 1 358 GLN n 1 359 LEU n 1 360 TRP n 1 361 GLN n 1 362 LYS n 1 363 GLU n 1 364 GLY n 1 365 GLU n 1 366 GLN n 1 367 THR n 1 368 LYS n 1 369 ASP n 1 370 ASN n 1 371 SER n 1 372 LEU n 1 373 PHE n 1 374 LEU n 1 375 GLN n 1 376 GLY n 1 377 GLU n 1 378 ARG n 1 379 THR n 1 380 ALA n 1 381 THR n 1 382 ASP n 1 383 LYS n 1 384 ILE n 1 385 PRO n 1 386 VAL n 1 387 GLY n 1 388 GLY n 1 389 ASN n 1 390 TYR n 1 391 LYS n 1 392 TYR n 1 393 VAL n 1 394 GLY n 1 395 THR n 1 396 TRP n 1 397 ASP n 1 398 ALA n 1 399 LEU n 1 400 VAL n 1 401 SER n 1 402 LYS n 1 403 GLY n 1 404 THR n 1 405 ASN n 1 406 TRP n 1 407 VAL n 1 408 ALA n 1 409 GLU n 1 410 ALA n 1 411 ASP n 1 412 ASN n 1 413 ASN n 1 414 ARG n 1 415 GLU n 1 416 SER n 1 417 GLY n 1 418 TYR n 1 419 ARG n 1 420 SER n 1 421 GLU n 1 422 PHE n 1 423 ASP n 1 424 VAL n 1 425 ASN n 1 426 PHE n 1 427 GLY n 1 428 ASP n 1 429 LYS n 1 430 LYS n 1 431 VAL n 1 432 SER n 1 433 GLY n 1 434 LYS n 1 435 LEU n 1 436 PHE n 1 437 ASP n 1 438 LYS n 1 439 GLY n 1 440 GLY n 1 441 ILE n 1 442 VAL n 1 443 PRO n 1 444 VAL n 1 445 PHE n 1 446 MET n 1 447 ILE n 1 448 ASN n 1 449 ALA n 1 450 ASP n 1 451 ILE n 1 452 LYS n 1 453 GLY n 1 454 ASN n 1 455 GLY n 1 456 PHE n 1 457 THR n 1 458 GLY n 1 459 THR n 1 460 ALA n 1 461 ASN n 1 462 THR n 1 463 THR n 1 464 ASP n 1 465 THR n 1 466 GLY n 1 467 PHE n 1 468 ALA n 1 469 LEU n 1 470 ASP n 1 471 SER n 1 472 GLY n 1 473 SER n 1 474 SER n 1 475 GLN n 1 476 HIS n 1 477 GLY n 1 478 ASN n 1 479 ALA n 1 480 VAL n 1 481 PHE n 1 482 SER n 1 483 ASP n 1 484 ILE n 1 485 LYS n 1 486 VAL n 1 487 ASN n 1 488 GLY n 1 489 GLY n 1 490 PHE n 1 491 TYR n 1 492 GLY n 1 493 PRO n 1 494 THR n 1 495 ALA n 1 496 GLY n 1 497 GLU n 1 498 LEU n 1 499 GLY n 1 500 GLY n 1 501 GLN n 1 502 PHE n 1 503 HIS n 1 504 HIS n 1 505 LYS n 1 506 SER n 1 507 ASP n 1 508 ASN n 1 509 GLY n 1 510 SER n 1 511 VAL n 1 512 GLY n 1 513 ALA n 1 514 VAL n 1 515 PHE n 1 516 GLY n 1 517 ALA n 1 518 LYS n 1 519 ARG n 1 520 GLN n 1 521 ILE n 1 522 GLU n 1 523 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene tfbA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Actinobacillus pleuropneumoniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 715 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q44167_ACTPL _struct_ref.pdbx_db_accession Q44167 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GSFDLDDVQPNKAVEPEKTKVNYTDEETQKRKKEELDKLMEPALGYVTKIPVNIPSVRKTEISEIDTVTDESLSLVPNED KLRTIANENYGSVVTKSGSNTMNFVRSGYTIDVDHYGLRDKGYVYYKGVHPSKELPKGNIIVYQGEWDFTSNADLDAKRP NYNPEFNGYGAGQRVGVTSADAKERTYISKFNIDFSNKKLNGQLLTKTKENQEKLRYTVEANISGNRFRGKATATDKTDP ILGKDSEHLEGGLYGPKSEELAGKFVAHDKSLFAVFSGKRGNDVLETVKIIDASKIDLTTFESSELNNFGNANVLIIDGQ KIDLAGADFKNRKTVDINGKTMVAIACCSNLEYMKFGQLWQKEGEQTKDNSLFLQGERTATDKIPVGGNYKYVGTWDALV SKGTNWVAEADNNRESGYRSEFDVNFGDKKVSGKLFDKGGIVPVFMINADIKGNGFTGTANTTDTGFALDSGSSQHGNAV FSDIKVNGGFYGPTAGELGGQFHHKSDNGSVGAVFGAKRQIEK ; _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4O3Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 523 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q44167 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 547 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 528 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4O3Y VAL A 114 ? UNP Q44167 ASP 138 CONFLICT 119 1 1 4O3Y GLU A 174 ? UNP Q44167 ARG 198 'ENGINEERED MUTATION' 179 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4O3Y _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.98 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 69.09 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;0.16 M sodium acetate, 0.08 M calcium cacodylate, 23% PEG 3350, 15% glycerol, pH 6.5, vapor diffusion, hanging drop, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2009-12-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 # _reflns.entry_id 4O3Y _reflns.B_iso_Wilson_estimate 47.810 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.6 _reflns.d_resolution_low 46.655 _reflns.number_all ? _reflns.number_obs 30052 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4O3Y _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 2.6000 _refine.ls_d_res_low 46.6550 _refine.pdbx_ls_sigma_F 2.010 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.6900 _refine.ls_number_reflns_obs 27629 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1971 _refine.ls_R_factor_R_work 0.1952 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2309 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1381 _refine.ls_number_reflns_R_work 26248 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 56.3817 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.3900 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 144.580 _refine.B_iso_min 15.260 _refine.pdbx_overall_phase_error 25.9500 _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_diffrn_id 1 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3883 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 67 _refine_hist.number_atoms_total 3974 _refine_hist.d_res_high 2.6000 _refine_hist.d_res_low 46.6550 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 4032 0.004 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 5441 0.870 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 586 0.032 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 722 0.003 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 1502 13.209 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.6000 2.6929 10 75.0000 1991 . 0.3451 0.3746 . 104 . 2095 . 'X-RAY DIFFRACTION' . 2.6929 2.8007 10 93.0000 2470 . 0.3363 0.3755 . 131 . 2601 . 'X-RAY DIFFRACTION' . 2.8007 2.9282 10 100.0000 2688 . 0.3003 0.3586 . 142 . 2830 . 'X-RAY DIFFRACTION' . 2.9282 3.0825 10 100.0000 2675 . 0.2678 0.3466 . 140 . 2815 . 'X-RAY DIFFRACTION' . 3.0825 3.2756 10 100.0000 2691 . 0.2410 0.2886 . 142 . 2833 . 'X-RAY DIFFRACTION' . 3.2756 3.5284 10 100.0000 2700 . 0.2200 0.2546 . 142 . 2842 . 'X-RAY DIFFRACTION' . 3.5284 3.8834 10 100.0000 2719 . 0.1790 0.2193 . 141 . 2860 . 'X-RAY DIFFRACTION' . 3.8834 4.4449 10 100.0000 2705 . 0.1481 0.1900 . 143 . 2848 . 'X-RAY DIFFRACTION' . 4.4449 5.5986 10 100.0000 2764 . 0.1399 0.1790 . 146 . 2910 . 'X-RAY DIFFRACTION' . 5.5986 46.6624 10 100.0000 2845 . 0.1536 0.1692 . 150 . 2995 . 'X-RAY DIFFRACTION' . # _struct.entry_id 4O3Y _struct.title ;Crystal structure of the vaccine antigen Transferrin Binding Protein B (TbpB) mutant Arg-179-Glu from Actinobacillus pleuropneumoniae H87 ; _struct.pdbx_descriptor 'Outer membrane protein; transferrin-binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4O3Y _struct_keywords.text ;Structure-based vaccine design, transferrin receptor, iron acquisition, host pathogen interaction, surface lipoprotein, METAL TRANSPORT ; _struct_keywords.pdbx_keywords 'METAL TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 28 ? LEU A 39 ? THR A 33 LEU A 44 1 ? 12 HELX_P HELX_P2 2 ASN A 78 ? ASN A 89 ? ASN A 83 ASN A 94 1 ? 12 HELX_P HELX_P3 3 THR A 178 ? ALA A 182 ? THR A 183 ALA A 187 5 ? 5 HELX_P HELX_P4 4 ALA A 380 ? ILE A 384 ? ALA A 385 ILE A 389 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 347 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 348 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 352 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 353 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.034 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 CYS 347 A . ? CYS 352 A CYS 348 A ? CYS 353 A 1 -3.03 2 SER 474 A . ? SER 479 A GLN 475 A ? GLN 480 A 1 -0.62 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? D ? 9 ? E ? 6 ? F ? 2 ? G ? 10 ? H ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel D 6 7 ? anti-parallel D 7 8 ? anti-parallel D 8 9 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel F 1 2 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel G 5 6 ? anti-parallel G 6 7 ? anti-parallel G 7 8 ? anti-parallel G 8 9 ? anti-parallel G 9 10 ? anti-parallel H 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 65 ? VAL A 68 ? ILE A 70 VAL A 73 A 2 GLY A 45 ? LYS A 49 ? GLY A 50 LYS A 54 A 3 GLY A 122 ? GLY A 128 ? GLY A 127 GLY A 133 A 4 VAL A 105 ? ASP A 112 ? VAL A 110 ASP A 117 A 5 VAL A 93 ? LYS A 96 ? VAL A 98 LYS A 101 B 1 LYS A 59 ? THR A 60 ? LYS A 64 THR A 65 B 2 ALA A 153 ? ASP A 154 ? ALA A 158 ASP A 159 C 1 GLU A 134 ? PRO A 136 ? GLU A 139 PRO A 141 C 2 THR A 287 ? LYS A 289 ? THR A 292 LYS A 294 D 1 ILE A 140 ? SER A 151 ? ILE A 145 SER A 156 D 2 THR A 186 ? ASP A 194 ? THR A 191 ASP A 199 D 3 LYS A 199 ? LYS A 207 ? LYS A 204 LYS A 212 D 4 GLU A 213 ? SER A 224 ? GLU A 218 SER A 229 D 5 ARG A 227 ? ALA A 234 ? ARG A 232 ALA A 239 D 6 SER A 246 ? TYR A 254 ? SER A 251 TYR A 259 D 7 GLU A 260 ? VAL A 266 ? GLU A 265 VAL A 271 D 8 LEU A 272 ? ARG A 280 ? LEU A 277 ARG A 285 D 9 ILE A 140 ? SER A 151 ? ILE A 145 SER A 156 E 1 SER A 303 ? GLU A 305 ? SER A 308 GLU A 310 E 2 ILE A 291 ? ASP A 297 ? ILE A 296 ASP A 302 E 3 GLN A 366 ? GLU A 377 ? GLN A 371 GLU A 382 E 4 MET A 354 ? GLU A 363 ? MET A 359 GLU A 368 E 5 LYS A 340 ? CYS A 347 ? LYS A 345 CYS A 352 E 6 LYS A 330 ? ILE A 337 ? LYS A 335 ILE A 342 F 1 VAL A 314 ? ILE A 317 ? VAL A 319 ILE A 322 F 2 GLN A 320 ? ASP A 323 ? GLN A 325 ASP A 328 G 1 ASN A 405 ? ALA A 408 ? ASN A 410 ALA A 413 G 2 ASN A 389 ? SER A 401 ? ASN A 394 SER A 406 G 3 SER A 510 ? ARG A 519 ? SER A 515 ARG A 524 G 4 GLU A 497 ? HIS A 504 ? GLU A 502 HIS A 509 G 5 ILE A 484 ? TYR A 491 ? ILE A 489 TYR A 496 G 6 GLY A 455 ? ASN A 461 ? GLY A 460 ASN A 466 G 7 PHE A 445 ? LYS A 452 ? PHE A 450 LYS A 457 G 8 LYS A 430 ? LEU A 435 ? LYS A 435 LEU A 440 G 9 ARG A 419 ? ASN A 425 ? ARG A 424 ASN A 430 G 10 ASN A 389 ? SER A 401 ? ASN A 394 SER A 406 H 1 PHE A 467 ? ALA A 468 ? PHE A 472 ALA A 473 H 2 ASN A 478 ? ALA A 479 ? ASN A 483 ALA A 484 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASP A 66 ? O ASP A 71 N VAL A 47 ? N VAL A 52 A 2 3 N THR A 48 ? N THR A 53 O VAL A 124 ? O VAL A 129 A 3 4 O TYR A 125 ? O TYR A 130 N GLY A 108 ? N GLY A 113 A 4 5 O TYR A 109 ? O TYR A 114 N LYS A 96 ? N LYS A 101 B 1 2 N THR A 60 ? N THR A 65 O ALA A 153 ? O ALA A 158 C 1 2 N LEU A 135 ? N LEU A 140 O VAL A 288 ? O VAL A 293 D 1 2 N GLY A 145 ? N GLY A 150 O SER A 189 ? O SER A 194 D 2 3 N ILE A 188 ? N ILE A 193 O LEU A 205 ? O LEU A 210 D 3 4 N GLY A 202 ? N GLY A 207 O VAL A 219 ? O VAL A 224 D 4 5 N THR A 218 ? N THR A 223 O THR A 233 ? O THR A 238 D 5 6 N ALA A 232 ? N ALA A 237 O SER A 246 ? O SER A 251 D 6 7 N GLY A 252 ? N GLY A 257 O ALA A 262 ? O ALA A 267 D 7 8 N PHE A 265 ? N PHE A 270 O ALA A 274 ? O ALA A 279 D 8 9 O LYS A 279 ? O LYS A 284 N GLN A 144 ? N GLN A 149 E 1 2 O SER A 304 ? O SER A 309 N LYS A 295 ? N LYS A 300 E 2 3 N SER A 294 ? N SER A 299 O LEU A 374 ? O LEU A 379 E 3 4 O LYS A 368 ? O LYS A 373 N GLN A 361 ? N GLN A 366 E 4 5 O LYS A 362 ? O LYS A 367 N THR A 341 ? N THR A 346 E 5 6 O LYS A 340 ? O LYS A 345 N ILE A 337 ? N ILE A 342 F 1 2 N LEU A 315 ? N LEU A 320 O ILE A 322 ? O ILE A 327 G 1 2 O TRP A 406 ? O TRP A 411 N VAL A 400 ? N VAL A 405 G 2 3 N ASP A 397 ? N ASP A 402 O VAL A 514 ? O VAL A 519 G 3 4 O ALA A 517 ? O ALA A 522 N LEU A 498 ? N LEU A 503 G 4 5 O GLU A 497 ? O GLU A 502 N TYR A 491 ? N TYR A 496 G 5 6 O ILE A 484 ? O ILE A 489 N ALA A 460 ? N ALA A 465 G 6 7 O THR A 457 ? O THR A 462 N ASP A 450 ? N ASP A 455 G 7 8 O PHE A 445 ? O PHE A 450 N LEU A 435 ? N LEU A 440 G 8 9 O SER A 432 ? O SER A 437 N ASP A 423 ? N ASP A 428 G 9 10 O VAL A 424 ? O VAL A 429 N TYR A 390 ? N TYR A 395 H 1 2 N PHE A 467 ? N PHE A 472 O ALA A 479 ? O ALA A 484 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 601' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL A 602' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ACT A 603' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ACT A 604' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE ACT A 605' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 GLN A 203 ? GLN A 208 . ? 1_555 ? 2 AC1 7 LEU A 205 ? LEU A 210 . ? 1_555 ? 3 AC1 7 GLU A 213 ? GLU A 218 . ? 1_555 ? 4 AC1 7 THR A 233 ? THR A 238 . ? 3_555 ? 5 AC1 7 ALA A 234 ? ALA A 239 . ? 3_555 ? 6 AC1 7 THR A 235 ? THR A 240 . ? 3_555 ? 7 AC1 7 LYS A 237 ? LYS A 242 . ? 3_555 ? 8 AC2 6 ASN A 163 ? ASN A 168 . ? 1_555 ? 9 AC2 6 PRO A 164 ? PRO A 169 . ? 1_555 ? 10 AC2 6 GLU A 165 ? GLU A 170 . ? 1_555 ? 11 AC2 6 ASP A 239 ? ASP A 244 . ? 1_555 ? 12 AC2 6 PRO A 240 ? PRO A 245 . ? 1_555 ? 13 AC2 6 ILE A 241 ? ILE A 246 . ? 1_555 ? 14 AC3 5 ASN A 311 ? ASN A 316 . ? 1_555 ? 15 AC3 5 ASN A 313 ? ASN A 318 . ? 1_555 ? 16 AC3 5 GLU A 352 ? GLU A 357 . ? 1_555 ? 17 AC3 5 GLU A 377 ? GLU A 382 . ? 1_555 ? 18 AC3 5 HOH G . ? HOH A 749 . ? 1_555 ? 19 AC4 5 PRO A 42 ? PRO A 47 . ? 1_555 ? 20 AC4 5 THR A 67 ? THR A 72 . ? 1_555 ? 21 AC4 5 GLY A 319 ? GLY A 324 . ? 1_555 ? 22 AC4 5 GLN A 320 ? GLN A 325 . ? 1_555 ? 23 AC4 5 LYS A 321 ? LYS A 326 . ? 1_555 ? 24 AC5 3 GLU A 71 ? GLU A 76 . ? 1_555 ? 25 AC5 3 GLU A 305 ? GLU A 310 . ? 1_555 ? 26 AC5 3 ASN A 307 ? ASN A 312 . ? 1_555 ? # _atom_sites.entry_id 4O3Y _atom_sites.fract_transf_matrix[1][1] 0.007424 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006702 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010984 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 6 ? ? ? A . n A 1 2 SER 2 7 ? ? ? A . n A 1 3 PHE 3 8 ? ? ? A . n A 1 4 ASP 4 9 ? ? ? A . n A 1 5 LEU 5 10 ? ? ? A . n A 1 6 ASP 6 11 ? ? ? A . n A 1 7 ASP 7 12 ? ? ? A . n A 1 8 VAL 8 13 ? ? ? A . n A 1 9 GLN 9 14 ? ? ? A . n A 1 10 PRO 10 15 ? ? ? A . n A 1 11 ASN 11 16 ? ? ? A . n A 1 12 LYS 12 17 ? ? ? A . n A 1 13 ALA 13 18 ? ? ? A . n A 1 14 VAL 14 19 ? ? ? A . n A 1 15 GLU 15 20 ? ? ? A . n A 1 16 PRO 16 21 ? ? ? A . n A 1 17 GLU 17 22 ? ? ? A . n A 1 18 LYS 18 23 ? ? ? A . n A 1 19 THR 19 24 ? ? ? A . n A 1 20 LYS 20 25 ? ? ? A . n A 1 21 VAL 21 26 26 VAL VAL A . n A 1 22 ASN 22 27 27 ASN ASN A . n A 1 23 TYR 23 28 28 TYR TYR A . n A 1 24 THR 24 29 29 THR THR A . n A 1 25 ASP 25 30 30 ASP ASP A . n A 1 26 GLU 26 31 31 GLU GLU A . n A 1 27 GLU 27 32 32 GLU GLU A . n A 1 28 THR 28 33 33 THR THR A . n A 1 29 GLN 29 34 34 GLN GLN A . n A 1 30 LYS 30 35 35 LYS LYS A . n A 1 31 ARG 31 36 36 ARG ARG A . n A 1 32 LYS 32 37 37 LYS LYS A . n A 1 33 LYS 33 38 38 LYS LYS A . n A 1 34 GLU 34 39 39 GLU GLU A . n A 1 35 GLU 35 40 40 GLU GLU A . n A 1 36 LEU 36 41 41 LEU LEU A . n A 1 37 ASP 37 42 42 ASP ASP A . n A 1 38 LYS 38 43 43 LYS LYS A . n A 1 39 LEU 39 44 44 LEU LEU A . n A 1 40 MET 40 45 45 MET MET A . n A 1 41 GLU 41 46 46 GLU GLU A . n A 1 42 PRO 42 47 47 PRO PRO A . n A 1 43 ALA 43 48 48 ALA ALA A . n A 1 44 LEU 44 49 49 LEU LEU A . n A 1 45 GLY 45 50 50 GLY GLY A . n A 1 46 TYR 46 51 51 TYR TYR A . n A 1 47 VAL 47 52 52 VAL VAL A . n A 1 48 THR 48 53 53 THR THR A . n A 1 49 LYS 49 54 54 LYS LYS A . n A 1 50 ILE 50 55 55 ILE ILE A . n A 1 51 PRO 51 56 56 PRO PRO A . n A 1 52 VAL 52 57 57 VAL VAL A . n A 1 53 ASN 53 58 58 ASN ASN A . n A 1 54 ILE 54 59 59 ILE ILE A . n A 1 55 PRO 55 60 60 PRO PRO A . n A 1 56 SER 56 61 61 SER SER A . n A 1 57 VAL 57 62 62 VAL VAL A . n A 1 58 ARG 58 63 63 ARG ARG A . n A 1 59 LYS 59 64 64 LYS LYS A . n A 1 60 THR 60 65 65 THR THR A . n A 1 61 GLU 61 66 66 GLU GLU A . n A 1 62 ILE 62 67 67 ILE ILE A . n A 1 63 SER 63 68 68 SER SER A . n A 1 64 GLU 64 69 69 GLU GLU A . n A 1 65 ILE 65 70 70 ILE ILE A . n A 1 66 ASP 66 71 71 ASP ASP A . n A 1 67 THR 67 72 72 THR THR A . n A 1 68 VAL 68 73 73 VAL VAL A . n A 1 69 THR 69 74 74 THR THR A . n A 1 70 ASP 70 75 75 ASP ASP A . n A 1 71 GLU 71 76 76 GLU GLU A . n A 1 72 SER 72 77 77 SER SER A . n A 1 73 LEU 73 78 78 LEU LEU A . n A 1 74 SER 74 79 79 SER SER A . n A 1 75 LEU 75 80 80 LEU LEU A . n A 1 76 VAL 76 81 81 VAL VAL A . n A 1 77 PRO 77 82 82 PRO PRO A . n A 1 78 ASN 78 83 83 ASN ASN A . n A 1 79 GLU 79 84 84 GLU GLU A . n A 1 80 ASP 80 85 85 ASP ASP A . n A 1 81 LYS 81 86 86 LYS LYS A . n A 1 82 LEU 82 87 87 LEU LEU A . n A 1 83 ARG 83 88 88 ARG ARG A . n A 1 84 THR 84 89 89 THR THR A . n A 1 85 ILE 85 90 90 ILE ILE A . n A 1 86 ALA 86 91 91 ALA ALA A . n A 1 87 ASN 87 92 92 ASN ASN A . n A 1 88 GLU 88 93 93 GLU GLU A . n A 1 89 ASN 89 94 94 ASN ASN A . n A 1 90 TYR 90 95 95 TYR TYR A . n A 1 91 GLY 91 96 96 GLY GLY A . n A 1 92 SER 92 97 97 SER SER A . n A 1 93 VAL 93 98 98 VAL VAL A . n A 1 94 VAL 94 99 99 VAL VAL A . n A 1 95 THR 95 100 100 THR THR A . n A 1 96 LYS 96 101 101 LYS LYS A . n A 1 97 SER 97 102 102 SER SER A . n A 1 98 GLY 98 103 103 GLY GLY A . n A 1 99 SER 99 104 104 SER SER A . n A 1 100 ASN 100 105 105 ASN ASN A . n A 1 101 THR 101 106 106 THR THR A . n A 1 102 MET 102 107 107 MET MET A . n A 1 103 ASN 103 108 108 ASN ASN A . n A 1 104 PHE 104 109 109 PHE PHE A . n A 1 105 VAL 105 110 110 VAL VAL A . n A 1 106 ARG 106 111 111 ARG ARG A . n A 1 107 SER 107 112 112 SER SER A . n A 1 108 GLY 108 113 113 GLY GLY A . n A 1 109 TYR 109 114 114 TYR TYR A . n A 1 110 THR 110 115 115 THR THR A . n A 1 111 ILE 111 116 116 ILE ILE A . n A 1 112 ASP 112 117 117 ASP ASP A . n A 1 113 VAL 113 118 118 VAL VAL A . n A 1 114 VAL 114 119 119 VAL VAL A . n A 1 115 HIS 115 120 120 HIS HIS A . n A 1 116 TYR 116 121 121 TYR TYR A . n A 1 117 GLY 117 122 122 GLY GLY A . n A 1 118 LEU 118 123 123 LEU LEU A . n A 1 119 ARG 119 124 124 ARG ARG A . n A 1 120 ASP 120 125 125 ASP ASP A . n A 1 121 LYS 121 126 126 LYS LYS A . n A 1 122 GLY 122 127 127 GLY GLY A . n A 1 123 TYR 123 128 128 TYR TYR A . n A 1 124 VAL 124 129 129 VAL VAL A . n A 1 125 TYR 125 130 130 TYR TYR A . n A 1 126 TYR 126 131 131 TYR TYR A . n A 1 127 LYS 127 132 132 LYS LYS A . n A 1 128 GLY 128 133 133 GLY GLY A . n A 1 129 VAL 129 134 134 VAL VAL A . n A 1 130 HIS 130 135 135 HIS HIS A . n A 1 131 PRO 131 136 136 PRO PRO A . n A 1 132 SER 132 137 137 SER SER A . n A 1 133 LYS 133 138 138 LYS LYS A . n A 1 134 GLU 134 139 139 GLU GLU A . n A 1 135 LEU 135 140 140 LEU LEU A . n A 1 136 PRO 136 141 141 PRO PRO A . n A 1 137 LYS 137 142 142 LYS LYS A . n A 1 138 GLY 138 143 143 GLY GLY A . n A 1 139 ASN 139 144 144 ASN ASN A . n A 1 140 ILE 140 145 145 ILE ILE A . n A 1 141 ILE 141 146 146 ILE ILE A . n A 1 142 VAL 142 147 147 VAL VAL A . n A 1 143 TYR 143 148 148 TYR TYR A . n A 1 144 GLN 144 149 149 GLN GLN A . n A 1 145 GLY 145 150 150 GLY GLY A . n A 1 146 GLU 146 151 151 GLU GLU A . n A 1 147 TRP 147 152 152 TRP TRP A . n A 1 148 ASP 148 153 153 ASP ASP A . n A 1 149 PHE 149 154 154 PHE PHE A . n A 1 150 THR 150 155 155 THR THR A . n A 1 151 SER 151 156 156 SER SER A . n A 1 152 ASN 152 157 157 ASN ASN A . n A 1 153 ALA 153 158 158 ALA ALA A . n A 1 154 ASP 154 159 159 ASP ASP A . n A 1 155 LEU 155 160 160 LEU LEU A . n A 1 156 ASP 156 161 161 ASP ASP A . n A 1 157 ALA 157 162 162 ALA ALA A . n A 1 158 LYS 158 163 163 LYS LYS A . n A 1 159 ARG 159 164 164 ARG ARG A . n A 1 160 PRO 160 165 165 PRO PRO A . n A 1 161 ASN 161 166 166 ASN ASN A . n A 1 162 TYR 162 167 167 TYR TYR A . n A 1 163 ASN 163 168 168 ASN ASN A . n A 1 164 PRO 164 169 169 PRO PRO A . n A 1 165 GLU 165 170 170 GLU GLU A . n A 1 166 PHE 166 171 171 PHE PHE A . n A 1 167 ASN 167 172 172 ASN ASN A . n A 1 168 GLY 168 173 173 GLY GLY A . n A 1 169 TYR 169 174 174 TYR TYR A . n A 1 170 GLY 170 175 175 GLY GLY A . n A 1 171 ALA 171 176 176 ALA ALA A . n A 1 172 GLY 172 177 177 GLY GLY A . n A 1 173 GLN 173 178 178 GLN GLN A . n A 1 174 GLU 174 179 179 GLU GLU A . n A 1 175 VAL 175 180 180 VAL VAL A . n A 1 176 GLY 176 181 181 GLY GLY A . n A 1 177 VAL 177 182 182 VAL VAL A . n A 1 178 THR 178 183 183 THR THR A . n A 1 179 SER 179 184 184 SER SER A . n A 1 180 ALA 180 185 185 ALA ALA A . n A 1 181 ASP 181 186 186 ASP ASP A . n A 1 182 ALA 182 187 187 ALA ALA A . n A 1 183 LYS 183 188 188 LYS LYS A . n A 1 184 GLU 184 189 189 GLU GLU A . n A 1 185 ARG 185 190 190 ARG ARG A . n A 1 186 THR 186 191 191 THR THR A . n A 1 187 TYR 187 192 192 TYR TYR A . n A 1 188 ILE 188 193 193 ILE ILE A . n A 1 189 SER 189 194 194 SER SER A . n A 1 190 LYS 190 195 195 LYS LYS A . n A 1 191 PHE 191 196 196 PHE PHE A . n A 1 192 ASN 192 197 197 ASN ASN A . n A 1 193 ILE 193 198 198 ILE ILE A . n A 1 194 ASP 194 199 199 ASP ASP A . n A 1 195 PHE 195 200 200 PHE PHE A . n A 1 196 SER 196 201 201 SER SER A . n A 1 197 ASN 197 202 202 ASN ASN A . n A 1 198 LYS 198 203 203 LYS LYS A . n A 1 199 LYS 199 204 204 LYS LYS A . n A 1 200 LEU 200 205 205 LEU LEU A . n A 1 201 ASN 201 206 206 ASN ASN A . n A 1 202 GLY 202 207 207 GLY GLY A . n A 1 203 GLN 203 208 208 GLN GLN A . n A 1 204 LEU 204 209 209 LEU LEU A . n A 1 205 LEU 205 210 210 LEU LEU A . n A 1 206 THR 206 211 211 THR THR A . n A 1 207 LYS 207 212 212 LYS LYS A . n A 1 208 THR 208 213 213 THR THR A . n A 1 209 LYS 209 214 214 LYS LYS A . n A 1 210 GLU 210 215 215 GLU GLU A . n A 1 211 ASN 211 216 216 ASN ASN A . n A 1 212 GLN 212 217 217 GLN GLN A . n A 1 213 GLU 213 218 218 GLU GLU A . n A 1 214 LYS 214 219 219 LYS LYS A . n A 1 215 LEU 215 220 220 LEU LEU A . n A 1 216 ARG 216 221 221 ARG ARG A . n A 1 217 TYR 217 222 222 TYR TYR A . n A 1 218 THR 218 223 223 THR THR A . n A 1 219 VAL 219 224 224 VAL VAL A . n A 1 220 GLU 220 225 225 GLU GLU A . n A 1 221 ALA 221 226 226 ALA ALA A . n A 1 222 ASN 222 227 227 ASN ASN A . n A 1 223 ILE 223 228 228 ILE ILE A . n A 1 224 SER 224 229 229 SER SER A . n A 1 225 GLY 225 230 230 GLY GLY A . n A 1 226 ASN 226 231 231 ASN ASN A . n A 1 227 ARG 227 232 232 ARG ARG A . n A 1 228 PHE 228 233 233 PHE PHE A . n A 1 229 ARG 229 234 234 ARG ARG A . n A 1 230 GLY 230 235 235 GLY GLY A . n A 1 231 LYS 231 236 236 LYS LYS A . n A 1 232 ALA 232 237 237 ALA ALA A . n A 1 233 THR 233 238 238 THR THR A . n A 1 234 ALA 234 239 239 ALA ALA A . n A 1 235 THR 235 240 240 THR THR A . n A 1 236 ASP 236 241 241 ASP ASP A . n A 1 237 LYS 237 242 242 LYS LYS A . n A 1 238 THR 238 243 243 THR THR A . n A 1 239 ASP 239 244 244 ASP ASP A . n A 1 240 PRO 240 245 245 PRO PRO A . n A 1 241 ILE 241 246 246 ILE ILE A . n A 1 242 LEU 242 247 247 LEU LEU A . n A 1 243 GLY 243 248 248 GLY GLY A . n A 1 244 LYS 244 249 249 LYS LYS A . n A 1 245 ASP 245 250 250 ASP ASP A . n A 1 246 SER 246 251 251 SER SER A . n A 1 247 GLU 247 252 252 GLU GLU A . n A 1 248 HIS 248 253 253 HIS HIS A . n A 1 249 LEU 249 254 254 LEU LEU A . n A 1 250 GLU 250 255 255 GLU GLU A . n A 1 251 GLY 251 256 256 GLY GLY A . n A 1 252 GLY 252 257 257 GLY GLY A . n A 1 253 LEU 253 258 258 LEU LEU A . n A 1 254 TYR 254 259 259 TYR TYR A . n A 1 255 GLY 255 260 260 GLY GLY A . n A 1 256 PRO 256 261 261 PRO PRO A . n A 1 257 LYS 257 262 262 LYS LYS A . n A 1 258 SER 258 263 263 SER SER A . n A 1 259 GLU 259 264 264 GLU GLU A . n A 1 260 GLU 260 265 265 GLU GLU A . n A 1 261 LEU 261 266 266 LEU LEU A . n A 1 262 ALA 262 267 267 ALA ALA A . n A 1 263 GLY 263 268 268 GLY GLY A . n A 1 264 LYS 264 269 269 LYS LYS A . n A 1 265 PHE 265 270 270 PHE PHE A . n A 1 266 VAL 266 271 271 VAL VAL A . n A 1 267 ALA 267 272 272 ALA ALA A . n A 1 268 HIS 268 273 273 HIS HIS A . n A 1 269 ASP 269 274 274 ASP ASP A . n A 1 270 LYS 270 275 275 LYS LYS A . n A 1 271 SER 271 276 276 SER SER A . n A 1 272 LEU 272 277 277 LEU LEU A . n A 1 273 PHE 273 278 278 PHE PHE A . n A 1 274 ALA 274 279 279 ALA ALA A . n A 1 275 VAL 275 280 280 VAL VAL A . n A 1 276 PHE 276 281 281 PHE PHE A . n A 1 277 SER 277 282 282 SER SER A . n A 1 278 GLY 278 283 283 GLY GLY A . n A 1 279 LYS 279 284 284 LYS LYS A . n A 1 280 ARG 280 285 285 ARG ARG A . n A 1 281 GLY 281 286 286 GLY GLY A . n A 1 282 ASN 282 287 287 ASN ASN A . n A 1 283 ASP 283 288 288 ASP ASP A . n A 1 284 VAL 284 289 289 VAL VAL A . n A 1 285 LEU 285 290 290 LEU LEU A . n A 1 286 GLU 286 291 291 GLU GLU A . n A 1 287 THR 287 292 292 THR THR A . n A 1 288 VAL 288 293 293 VAL VAL A . n A 1 289 LYS 289 294 294 LYS LYS A . n A 1 290 ILE 290 295 295 ILE ILE A . n A 1 291 ILE 291 296 296 ILE ILE A . n A 1 292 ASP 292 297 297 ASP ASP A . n A 1 293 ALA 293 298 298 ALA ALA A . n A 1 294 SER 294 299 299 SER SER A . n A 1 295 LYS 295 300 300 LYS LYS A . n A 1 296 ILE 296 301 301 ILE ILE A . n A 1 297 ASP 297 302 302 ASP ASP A . n A 1 298 LEU 298 303 303 LEU LEU A . n A 1 299 THR 299 304 304 THR THR A . n A 1 300 THR 300 305 305 THR THR A . n A 1 301 PHE 301 306 306 PHE PHE A . n A 1 302 GLU 302 307 307 GLU GLU A . n A 1 303 SER 303 308 308 SER SER A . n A 1 304 SER 304 309 309 SER SER A . n A 1 305 GLU 305 310 310 GLU GLU A . n A 1 306 LEU 306 311 311 LEU LEU A . n A 1 307 ASN 307 312 312 ASN ASN A . n A 1 308 ASN 308 313 313 ASN ASN A . n A 1 309 PHE 309 314 314 PHE PHE A . n A 1 310 GLY 310 315 315 GLY GLY A . n A 1 311 ASN 311 316 316 ASN ASN A . n A 1 312 ALA 312 317 317 ALA ALA A . n A 1 313 ASN 313 318 318 ASN ASN A . n A 1 314 VAL 314 319 319 VAL VAL A . n A 1 315 LEU 315 320 320 LEU LEU A . n A 1 316 ILE 316 321 321 ILE ILE A . n A 1 317 ILE 317 322 322 ILE ILE A . n A 1 318 ASP 318 323 323 ASP ASP A . n A 1 319 GLY 319 324 324 GLY GLY A . n A 1 320 GLN 320 325 325 GLN GLN A . n A 1 321 LYS 321 326 326 LYS LYS A . n A 1 322 ILE 322 327 327 ILE ILE A . n A 1 323 ASP 323 328 328 ASP ASP A . n A 1 324 LEU 324 329 329 LEU LEU A . n A 1 325 ALA 325 330 330 ALA ALA A . n A 1 326 GLY 326 331 331 GLY GLY A . n A 1 327 ALA 327 332 332 ALA ALA A . n A 1 328 ASP 328 333 333 ASP ASP A . n A 1 329 PHE 329 334 334 PHE PHE A . n A 1 330 LYS 330 335 335 LYS LYS A . n A 1 331 ASN 331 336 336 ASN ASN A . n A 1 332 ARG 332 337 337 ARG ARG A . n A 1 333 LYS 333 338 338 LYS LYS A . n A 1 334 THR 334 339 339 THR THR A . n A 1 335 VAL 335 340 340 VAL VAL A . n A 1 336 ASP 336 341 341 ASP ASP A . n A 1 337 ILE 337 342 342 ILE ILE A . n A 1 338 ASN 338 343 343 ASN ASN A . n A 1 339 GLY 339 344 344 GLY GLY A . n A 1 340 LYS 340 345 345 LYS LYS A . n A 1 341 THR 341 346 346 THR THR A . n A 1 342 MET 342 347 347 MET MET A . n A 1 343 VAL 343 348 348 VAL VAL A . n A 1 344 ALA 344 349 349 ALA ALA A . n A 1 345 ILE 345 350 350 ILE ILE A . n A 1 346 ALA 346 351 351 ALA ALA A . n A 1 347 CYS 347 352 352 CYS CYS A . n A 1 348 CYS 348 353 353 CYS CYS A . n A 1 349 SER 349 354 354 SER SER A . n A 1 350 ASN 350 355 355 ASN ASN A . n A 1 351 LEU 351 356 356 LEU LEU A . n A 1 352 GLU 352 357 357 GLU GLU A . n A 1 353 TYR 353 358 358 TYR TYR A . n A 1 354 MET 354 359 359 MET MET A . n A 1 355 LYS 355 360 360 LYS LYS A . n A 1 356 PHE 356 361 361 PHE PHE A . n A 1 357 GLY 357 362 362 GLY GLY A . n A 1 358 GLN 358 363 363 GLN GLN A . n A 1 359 LEU 359 364 364 LEU LEU A . n A 1 360 TRP 360 365 365 TRP TRP A . n A 1 361 GLN 361 366 366 GLN GLN A . n A 1 362 LYS 362 367 367 LYS LYS A . n A 1 363 GLU 363 368 368 GLU GLU A . n A 1 364 GLY 364 369 369 GLY GLY A . n A 1 365 GLU 365 370 370 GLU GLU A . n A 1 366 GLN 366 371 371 GLN GLN A . n A 1 367 THR 367 372 372 THR THR A . n A 1 368 LYS 368 373 373 LYS LYS A . n A 1 369 ASP 369 374 374 ASP ASP A . n A 1 370 ASN 370 375 375 ASN ASN A . n A 1 371 SER 371 376 376 SER SER A . n A 1 372 LEU 372 377 377 LEU LEU A . n A 1 373 PHE 373 378 378 PHE PHE A . n A 1 374 LEU 374 379 379 LEU LEU A . n A 1 375 GLN 375 380 380 GLN GLN A . n A 1 376 GLY 376 381 381 GLY GLY A . n A 1 377 GLU 377 382 382 GLU GLU A . n A 1 378 ARG 378 383 383 ARG ARG A . n A 1 379 THR 379 384 384 THR THR A . n A 1 380 ALA 380 385 385 ALA ALA A . n A 1 381 THR 381 386 386 THR THR A . n A 1 382 ASP 382 387 387 ASP ASP A . n A 1 383 LYS 383 388 388 LYS LYS A . n A 1 384 ILE 384 389 389 ILE ILE A . n A 1 385 PRO 385 390 390 PRO PRO A . n A 1 386 VAL 386 391 391 VAL VAL A . n A 1 387 GLY 387 392 392 GLY GLY A . n A 1 388 GLY 388 393 393 GLY GLY A . n A 1 389 ASN 389 394 394 ASN ASN A . n A 1 390 TYR 390 395 395 TYR TYR A . n A 1 391 LYS 391 396 396 LYS LYS A . n A 1 392 TYR 392 397 397 TYR TYR A . n A 1 393 VAL 393 398 398 VAL VAL A . n A 1 394 GLY 394 399 399 GLY GLY A . n A 1 395 THR 395 400 400 THR THR A . n A 1 396 TRP 396 401 401 TRP TRP A . n A 1 397 ASP 397 402 402 ASP ASP A . n A 1 398 ALA 398 403 403 ALA ALA A . n A 1 399 LEU 399 404 404 LEU LEU A . n A 1 400 VAL 400 405 405 VAL VAL A . n A 1 401 SER 401 406 406 SER SER A . n A 1 402 LYS 402 407 407 LYS LYS A . n A 1 403 GLY 403 408 408 GLY GLY A . n A 1 404 THR 404 409 409 THR THR A . n A 1 405 ASN 405 410 410 ASN ASN A . n A 1 406 TRP 406 411 411 TRP TRP A . n A 1 407 VAL 407 412 412 VAL VAL A . n A 1 408 ALA 408 413 413 ALA ALA A . n A 1 409 GLU 409 414 414 GLU GLU A . n A 1 410 ALA 410 415 415 ALA ALA A . n A 1 411 ASP 411 416 416 ASP ASP A . n A 1 412 ASN 412 417 417 ASN ASN A . n A 1 413 ASN 413 418 418 ASN ASN A . n A 1 414 ARG 414 419 419 ARG ARG A . n A 1 415 GLU 415 420 420 GLU GLU A . n A 1 416 SER 416 421 421 SER SER A . n A 1 417 GLY 417 422 422 GLY GLY A . n A 1 418 TYR 418 423 423 TYR TYR A . n A 1 419 ARG 419 424 424 ARG ARG A . n A 1 420 SER 420 425 425 SER SER A . n A 1 421 GLU 421 426 426 GLU GLU A . n A 1 422 PHE 422 427 427 PHE PHE A . n A 1 423 ASP 423 428 428 ASP ASP A . n A 1 424 VAL 424 429 429 VAL VAL A . n A 1 425 ASN 425 430 430 ASN ASN A . n A 1 426 PHE 426 431 431 PHE PHE A . n A 1 427 GLY 427 432 432 GLY GLY A . n A 1 428 ASP 428 433 433 ASP ASP A . n A 1 429 LYS 429 434 434 LYS LYS A . n A 1 430 LYS 430 435 435 LYS LYS A . n A 1 431 VAL 431 436 436 VAL VAL A . n A 1 432 SER 432 437 437 SER SER A . n A 1 433 GLY 433 438 438 GLY GLY A . n A 1 434 LYS 434 439 439 LYS LYS A . n A 1 435 LEU 435 440 440 LEU LEU A . n A 1 436 PHE 436 441 441 PHE PHE A . n A 1 437 ASP 437 442 442 ASP ASP A . n A 1 438 LYS 438 443 443 LYS LYS A . n A 1 439 GLY 439 444 444 GLY GLY A . n A 1 440 GLY 440 445 445 GLY GLY A . n A 1 441 ILE 441 446 446 ILE ILE A . n A 1 442 VAL 442 447 447 VAL VAL A . n A 1 443 PRO 443 448 448 PRO PRO A . n A 1 444 VAL 444 449 449 VAL VAL A . n A 1 445 PHE 445 450 450 PHE PHE A . n A 1 446 MET 446 451 451 MET MET A . n A 1 447 ILE 447 452 452 ILE ILE A . n A 1 448 ASN 448 453 453 ASN ASN A . n A 1 449 ALA 449 454 454 ALA ALA A . n A 1 450 ASP 450 455 455 ASP ASP A . n A 1 451 ILE 451 456 456 ILE ILE A . n A 1 452 LYS 452 457 457 LYS LYS A . n A 1 453 GLY 453 458 458 GLY GLY A . n A 1 454 ASN 454 459 459 ASN ASN A . n A 1 455 GLY 455 460 460 GLY GLY A . n A 1 456 PHE 456 461 461 PHE PHE A . n A 1 457 THR 457 462 462 THR THR A . n A 1 458 GLY 458 463 463 GLY GLY A . n A 1 459 THR 459 464 464 THR THR A . n A 1 460 ALA 460 465 465 ALA ALA A . n A 1 461 ASN 461 466 466 ASN ASN A . n A 1 462 THR 462 467 467 THR THR A . n A 1 463 THR 463 468 468 THR THR A . n A 1 464 ASP 464 469 469 ASP ASP A . n A 1 465 THR 465 470 470 THR THR A . n A 1 466 GLY 466 471 471 GLY GLY A . n A 1 467 PHE 467 472 472 PHE PHE A . n A 1 468 ALA 468 473 473 ALA ALA A . n A 1 469 LEU 469 474 474 LEU LEU A . n A 1 470 ASP 470 475 475 ASP ASP A . n A 1 471 SER 471 476 476 SER SER A . n A 1 472 GLY 472 477 ? ? ? A . n A 1 473 SER 473 478 ? ? ? A . n A 1 474 SER 474 479 479 SER SER A . n A 1 475 GLN 475 480 480 GLN GLN A . n A 1 476 HIS 476 481 481 HIS HIS A . n A 1 477 GLY 477 482 482 GLY GLY A . n A 1 478 ASN 478 483 483 ASN ASN A . n A 1 479 ALA 479 484 484 ALA ALA A . n A 1 480 VAL 480 485 485 VAL VAL A . n A 1 481 PHE 481 486 486 PHE PHE A . n A 1 482 SER 482 487 487 SER SER A . n A 1 483 ASP 483 488 488 ASP ASP A . n A 1 484 ILE 484 489 489 ILE ILE A . n A 1 485 LYS 485 490 490 LYS LYS A . n A 1 486 VAL 486 491 491 VAL VAL A . n A 1 487 ASN 487 492 492 ASN ASN A . n A 1 488 GLY 488 493 493 GLY GLY A . n A 1 489 GLY 489 494 494 GLY GLY A . n A 1 490 PHE 490 495 495 PHE PHE A . n A 1 491 TYR 491 496 496 TYR TYR A . n A 1 492 GLY 492 497 497 GLY GLY A . n A 1 493 PRO 493 498 498 PRO PRO A . n A 1 494 THR 494 499 499 THR THR A . n A 1 495 ALA 495 500 500 ALA ALA A . n A 1 496 GLY 496 501 501 GLY GLY A . n A 1 497 GLU 497 502 502 GLU GLU A . n A 1 498 LEU 498 503 503 LEU LEU A . n A 1 499 GLY 499 504 504 GLY GLY A . n A 1 500 GLY 500 505 505 GLY GLY A . n A 1 501 GLN 501 506 506 GLN GLN A . n A 1 502 PHE 502 507 507 PHE PHE A . n A 1 503 HIS 503 508 508 HIS HIS A . n A 1 504 HIS 504 509 509 HIS HIS A . n A 1 505 LYS 505 510 510 LYS LYS A . n A 1 506 SER 506 511 511 SER SER A . n A 1 507 ASP 507 512 512 ASP ASP A . n A 1 508 ASN 508 513 513 ASN ASN A . n A 1 509 GLY 509 514 514 GLY GLY A . n A 1 510 SER 510 515 515 SER SER A . n A 1 511 VAL 511 516 516 VAL VAL A . n A 1 512 GLY 512 517 517 GLY GLY A . n A 1 513 ALA 513 518 518 ALA ALA A . n A 1 514 VAL 514 519 519 VAL VAL A . n A 1 515 PHE 515 520 520 PHE PHE A . n A 1 516 GLY 516 521 521 GLY GLY A . n A 1 517 ALA 517 522 522 ALA ALA A . n A 1 518 LYS 518 523 523 LYS LYS A . n A 1 519 ARG 519 524 524 ARG ARG A . n A 1 520 GLN 520 525 525 GLN GLN A . n A 1 521 ILE 521 526 526 ILE ILE A . n A 1 522 GLU 522 527 527 GLU GLU A . n A 1 523 LYS 523 528 528 LYS LYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-01-14 2 'Structure model' 1 1 2015-03-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHENIX 1.8.4_1496 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 68 ? ? -150.86 -44.22 2 1 ASN A 83 ? ? 57.93 19.14 3 1 THR A 106 ? ? -130.86 -43.30 4 1 ASN A 144 ? ? 67.69 170.57 5 1 ASP A 161 ? ? -107.59 44.01 6 1 LEU A 247 ? ? -115.18 51.91 7 1 GLU A 368 ? ? -115.40 73.23 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 6 ? A GLY 1 2 1 Y 1 A SER 7 ? A SER 2 3 1 Y 1 A PHE 8 ? A PHE 3 4 1 Y 1 A ASP 9 ? A ASP 4 5 1 Y 1 A LEU 10 ? A LEU 5 6 1 Y 1 A ASP 11 ? A ASP 6 7 1 Y 1 A ASP 12 ? A ASP 7 8 1 Y 1 A VAL 13 ? A VAL 8 9 1 Y 1 A GLN 14 ? A GLN 9 10 1 Y 1 A PRO 15 ? A PRO 10 11 1 Y 1 A ASN 16 ? A ASN 11 12 1 Y 1 A LYS 17 ? A LYS 12 13 1 Y 1 A ALA 18 ? A ALA 13 14 1 Y 1 A VAL 19 ? A VAL 14 15 1 Y 1 A GLU 20 ? A GLU 15 16 1 Y 1 A PRO 21 ? A PRO 16 17 1 Y 1 A GLU 22 ? A GLU 17 18 1 Y 1 A LYS 23 ? A LYS 18 19 1 Y 1 A THR 24 ? A THR 19 20 1 Y 1 A LYS 25 ? A LYS 20 21 1 Y 1 A GLY 477 ? A GLY 472 22 1 Y 1 A SER 478 ? A SER 473 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'ACETATE ION' ACT 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 601 529 GOL GOL A . C 2 GOL 1 602 530 GOL GOL A . D 3 ACT 1 603 531 ACT ACT A . E 3 ACT 1 604 532 ACT ACT A . F 3 ACT 1 605 533 ACT ACT A . G 4 HOH 1 701 534 HOH HOH A . G 4 HOH 2 702 535 HOH HOH A . G 4 HOH 3 703 536 HOH HOH A . G 4 HOH 4 704 537 HOH HOH A . G 4 HOH 5 705 538 HOH HOH A . G 4 HOH 6 706 539 HOH HOH A . G 4 HOH 7 707 540 HOH HOH A . G 4 HOH 8 708 541 HOH HOH A . G 4 HOH 9 709 542 HOH HOH A . G 4 HOH 10 710 543 HOH HOH A . G 4 HOH 11 711 544 HOH HOH A . G 4 HOH 12 712 545 HOH HOH A . G 4 HOH 13 713 546 HOH HOH A . G 4 HOH 14 714 547 HOH HOH A . G 4 HOH 15 715 548 HOH HOH A . G 4 HOH 16 716 549 HOH HOH A . G 4 HOH 17 717 550 HOH HOH A . G 4 HOH 18 718 551 HOH HOH A . G 4 HOH 19 719 552 HOH HOH A . G 4 HOH 20 720 553 HOH HOH A . G 4 HOH 21 721 554 HOH HOH A . G 4 HOH 22 722 555 HOH HOH A . G 4 HOH 23 723 556 HOH HOH A . G 4 HOH 24 724 557 HOH HOH A . G 4 HOH 25 725 558 HOH HOH A . G 4 HOH 26 726 559 HOH HOH A . G 4 HOH 27 727 560 HOH HOH A . G 4 HOH 28 728 561 HOH HOH A . G 4 HOH 29 729 562 HOH HOH A . G 4 HOH 30 730 563 HOH HOH A . G 4 HOH 31 731 564 HOH HOH A . G 4 HOH 32 732 565 HOH HOH A . G 4 HOH 33 733 566 HOH HOH A . G 4 HOH 34 734 567 HOH HOH A . G 4 HOH 35 735 568 HOH HOH A . G 4 HOH 36 736 569 HOH HOH A . G 4 HOH 37 737 570 HOH HOH A . G 4 HOH 38 738 571 HOH HOH A . G 4 HOH 39 739 572 HOH HOH A . G 4 HOH 40 740 573 HOH HOH A . G 4 HOH 41 741 574 HOH HOH A . G 4 HOH 42 742 575 HOH HOH A . G 4 HOH 43 743 576 HOH HOH A . G 4 HOH 44 744 577 HOH HOH A . G 4 HOH 45 745 578 HOH HOH A . G 4 HOH 46 746 579 HOH HOH A . G 4 HOH 47 747 580 HOH HOH A . G 4 HOH 48 748 581 HOH HOH A . G 4 HOH 49 749 582 HOH HOH A . G 4 HOH 50 750 583 HOH HOH A . G 4 HOH 51 751 584 HOH HOH A . G 4 HOH 52 752 585 HOH HOH A . G 4 HOH 53 753 586 HOH HOH A . G 4 HOH 54 754 587 HOH HOH A . G 4 HOH 55 755 588 HOH HOH A . G 4 HOH 56 756 589 HOH HOH A . G 4 HOH 57 757 590 HOH HOH A . G 4 HOH 58 758 591 HOH HOH A . G 4 HOH 59 759 592 HOH HOH A . G 4 HOH 60 760 593 HOH HOH A . G 4 HOH 61 761 594 HOH HOH A . G 4 HOH 62 762 595 HOH HOH A . G 4 HOH 63 763 596 HOH HOH A . G 4 HOH 64 764 597 HOH HOH A . G 4 HOH 65 765 598 HOH HOH A . G 4 HOH 66 766 599 HOH HOH A . G 4 HOH 67 767 600 HOH HOH A . #