HEADER HYDROLASE 18-DEC-13 4O48 TITLE CRYSTAL STRUCTURE OF CLEAVED GUINEA PIG L-ASPARAGINASE TYPE III IN TITLE 2 COMPLEX WITH L-ASPARTATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 24-332; COMPND 5 EC: 3.5.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAVIA PORCELLUS; SOURCE 3 ORGANISM_COMMON: GUINEA PIG; SOURCE 4 ORGANISM_TAXID: 10141; SOURCE 5 GENE: LOC100713636; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C41; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET14B KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.M.SCHALK,A.LAVIE REVDAT 3 28-FEB-24 4O48 1 REMARK SEQADV LINK REVDAT 2 07-MAY-14 4O48 1 JRNL REVDAT 1 09-APR-14 4O48 0 JRNL AUTH A.M.SCHALK,A.LAVIE JRNL TITL STRUCTURAL AND KINETIC CHARACTERIZATION OF GUINEA PIG JRNL TITL 2 L-ASPARAGINASE TYPE III. JRNL REF BIOCHEMISTRY V. 53 2318 2014 JRNL REFN ISSN 0006-2960 JRNL PMID 24669941 JRNL DOI 10.1021/BI401692V REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 44450 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2389 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.29 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.35 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3054 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE SET COUNT : 174 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4320 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 78 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 16.87000 REMARK 3 B22 (A**2) : 16.87000 REMARK 3 B33 (A**2) : -33.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.037 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.035 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.466 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4417 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4305 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5962 ; 1.498 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9884 ; 0.789 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 600 ; 6.525 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 172 ;32.643 ;23.837 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 748 ;16.092 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;18.163 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 688 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5111 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 955 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2397 ; 2.893 ; 4.051 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2396 ; 2.893 ; 4.051 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2989 ; 4.366 ; 6.065 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2990 ; 4.365 ; 6.065 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2020 ; 2.930 ; 4.392 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2017 ; 2.923 ; 4.391 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2971 ; 4.368 ; 6.456 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4963 ; 6.370 ;31.715 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4954 ; 6.370 ;31.707 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.400 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -H,-K,L REMARK 3 TWIN FRACTION : 0.600 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4O48 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084021. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97911 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47199 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.290 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07600 REMARK 200 FOR THE DATA SET : 14.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.53700 REMARK 200 FOR SHELL : 3.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.0, 0.2 M AMMONIUM REMARK 280 SULFATE, 13-15% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.39333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.19667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.19667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 92.39333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 GLY A -21 REMARK 465 SER A -20 REMARK 465 SER A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 SER A -12 REMARK 465 SER A -11 REMARK 465 GLY A -10 REMARK 465 GLY A -9 REMARK 465 ASN A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 ASP A 156 REMARK 465 ALA A 157 REMARK 465 SER A 158 REMARK 465 SER A 159 REMARK 465 PRO A 160 REMARK 465 ASP A 161 REMARK 465 CYS A 162 REMARK 465 PRO A 163 REMARK 465 LYS A 164 REMARK 465 ASN A 165 REMARK 465 LEU A 166 REMARK 465 GLY A 167 REMARK 465 MET B -22 REMARK 465 GLY B -21 REMARK 465 SER B -20 REMARK 465 SER B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 SER B -12 REMARK 465 SER B -11 REMARK 465 GLY B -10 REMARK 465 GLY B -9 REMARK 465 ASN B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 465 GLY B -1 REMARK 465 ASP B 156 REMARK 465 ALA B 157 REMARK 465 SER B 158 REMARK 465 SER B 159 REMARK 465 PRO B 160 REMARK 465 ASP B 161 REMARK 465 CYS B 162 REMARK 465 PRO B 163 REMARK 465 LYS B 164 REMARK 465 ASN B 165 REMARK 465 LEU B 166 REMARK 465 GLY B 167 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 16 -157.43 -70.72 REMARK 500 ALA A 63 142.38 -176.91 REMARK 500 GLN A 153 -83.44 -96.85 REMARK 500 ILE A 213 -65.77 -139.32 REMARK 500 ASN A 229 72.02 40.03 REMARK 500 LYS A 261 14.81 55.27 REMARK 500 ILE A 298 -53.00 -136.36 REMARK 500 SER B 13 -114.18 -110.35 REMARK 500 SER B 16 -155.96 -62.67 REMARK 500 CYS B 17 -77.10 -99.05 REMARK 500 VAL B 68 172.67 -59.86 REMARK 500 ASN B 191 32.55 78.80 REMARK 500 SER B 205 -64.89 -108.34 REMARK 500 ILE B 213 -62.38 -143.18 REMARK 500 HIS B 221 104.22 -55.89 REMARK 500 ILE B 298 -73.02 -125.18 REMARK 500 THR B 306 143.58 -172.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 55 O REMARK 620 2 GLU A 56 O 81.3 REMARK 620 3 ASP A 58 O 70.4 102.5 REMARK 620 4 PHE A 61 O 107.5 161.8 95.5 REMARK 620 5 ALA A 63 O 105.0 82.1 172.7 80.3 REMARK 620 6 HIS A 65 O 156.7 81.8 97.8 93.3 88.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 55 O REMARK 620 2 GLU B 56 O 81.9 REMARK 620 3 ASP B 58 O 80.3 95.6 REMARK 620 4 PHE B 61 O 112.6 164.2 93.2 REMARK 620 5 ALA B 63 O 112.2 80.1 165.7 88.2 REMARK 620 6 HIS B 65 O 152.9 78.0 83.7 89.9 82.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ASP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ASP B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4O47 RELATED DB: PDB REMARK 900 THE ACTIVE, CLEAVED FORM OF THE SAME PROTEIN IN COMPLEX WITH L- REMARK 900 ASPARTATE DBREF 4O48 A 1 309 UNP H0VQC8 H0VQC8_CAVPO 24 332 DBREF 4O48 B 1 309 UNP H0VQC8 H0VQC8_CAVPO 24 332 SEQADV 4O48 MET A -22 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLY A -21 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 SER A -20 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 SER A -19 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS A -18 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS A -17 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS A -16 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS A -15 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS A -14 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS A -13 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 SER A -12 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 SER A -11 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLY A -10 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLY A -9 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 ASN A -8 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLU A -7 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 ASN A -6 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 LEU A -5 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 TYR A -4 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 PHE A -3 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLN A -2 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLY A -1 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS A 0 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 MET B -22 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLY B -21 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 SER B -20 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 SER B -19 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS B -18 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS B -17 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS B -16 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS B -15 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS B -14 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS B -13 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 SER B -12 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 SER B -11 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLY B -10 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLY B -9 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 ASN B -8 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLU B -7 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 ASN B -6 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 LEU B -5 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 TYR B -4 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 PHE B -3 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLN B -2 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 GLY B -1 UNP H0VQC8 EXPRESSION TAG SEQADV 4O48 HIS B 0 UNP H0VQC8 EXPRESSION TAG SEQRES 1 A 332 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 332 GLY ASN GLU ASN LEU TYR PHE GLN GLY HIS MET GLU PRO SEQRES 3 A 332 VAL LEU VAL VAL HIS GLY GLY GLY ALA SER CYS ILE SER SEQRES 4 A 332 CYS GLU ARG ARG GLN ARG VAL ARG GLN GLY VAL ILE ARG SEQRES 5 A 332 ALA ALA SER LEU GLY HIS GLY VAL LEU ARG ALA GLY GLY SEQRES 6 A 332 SER ALA VAL ASP ALA VAL GLU ALA ALA VAL ALA ALA LEU SEQRES 7 A 332 GLU ASP ASP ALA GLU PHE ASN ALA GLY HIS GLY SER VAL SEQRES 8 A 332 LEU THR GLU ASN GLY ASP VAL GLU MET ASP ALA SER ILE SEQRES 9 A 332 MET ASP GLY ARG ASP LEU GLY ALA GLY ALA VAL SER ALA SEQRES 10 A 332 VAL ARG CYS ILE ALA ASN PRO ILE LYS LEU ALA ARG LEU SEQRES 11 A 332 VAL MET ASP LYS THR PRO HIS CYS PHE LEU THR GLY GLN SEQRES 12 A 332 GLY ALA ALA LYS PHE ALA ALA ASP MET GLY ILE SER GLU SEQRES 13 A 332 ILE PRO GLY GLU GLN LEU VAL THR GLU ARG ASN ARG LYS SEQRES 14 A 332 ARG LEU GLU LYS GLU ARG GLN GLU LYS ASP ALA SER SER SEQRES 15 A 332 PRO ASP CYS PRO LYS ASN LEU GLY THR VAL GLY ALA VAL SEQRES 16 A 332 ALA LEU ASP CYS LYS GLY ASN VAL ALA TYR ALA THR SER SEQRES 17 A 332 THR GLY GLY ILE VAL ASN LYS MET THR GLY ARG VAL GLY SEQRES 18 A 332 ASP SER PRO CYS ILE GLY SER GLY GLY TYR ALA ASP ASN SEQRES 19 A 332 SER ILE GLY ALA VAL SER THR THR GLY HIS GLY GLU SER SEQRES 20 A 332 ILE LEU LYS VAL ASN LEU ALA ARG LEU ALA LEU PHE HIS SEQRES 21 A 332 LEU GLU GLN GLY GLY LYS THR VAL ASP GLU ALA ALA ASP SEQRES 22 A 332 LEU ALA LEU GLY TYR MET LYS SER ARG LEU LYS GLY LEU SEQRES 23 A 332 GLY GLY LEU ILE LEU VAL SER ARG THR GLY GLU TRP VAL SEQRES 24 A 332 ALA LYS TRP THR SER THR SER MET PRO TRP ALA ALA VAL SEQRES 25 A 332 LYS GLY GLY LYS VAL HIS ALA GLY ILE ASP LEU ASN ASP SEQRES 26 A 332 THR THR VAL THR ASP LEU CYS SEQRES 1 B 332 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 332 GLY ASN GLU ASN LEU TYR PHE GLN GLY HIS MET GLU PRO SEQRES 3 B 332 VAL LEU VAL VAL HIS GLY GLY GLY ALA SER CYS ILE SER SEQRES 4 B 332 CYS GLU ARG ARG GLN ARG VAL ARG GLN GLY VAL ILE ARG SEQRES 5 B 332 ALA ALA SER LEU GLY HIS GLY VAL LEU ARG ALA GLY GLY SEQRES 6 B 332 SER ALA VAL ASP ALA VAL GLU ALA ALA VAL ALA ALA LEU SEQRES 7 B 332 GLU ASP ASP ALA GLU PHE ASN ALA GLY HIS GLY SER VAL SEQRES 8 B 332 LEU THR GLU ASN GLY ASP VAL GLU MET ASP ALA SER ILE SEQRES 9 B 332 MET ASP GLY ARG ASP LEU GLY ALA GLY ALA VAL SER ALA SEQRES 10 B 332 VAL ARG CYS ILE ALA ASN PRO ILE LYS LEU ALA ARG LEU SEQRES 11 B 332 VAL MET ASP LYS THR PRO HIS CYS PHE LEU THR GLY GLN SEQRES 12 B 332 GLY ALA ALA LYS PHE ALA ALA ASP MET GLY ILE SER GLU SEQRES 13 B 332 ILE PRO GLY GLU GLN LEU VAL THR GLU ARG ASN ARG LYS SEQRES 14 B 332 ARG LEU GLU LYS GLU ARG GLN GLU LYS ASP ALA SER SER SEQRES 15 B 332 PRO ASP CYS PRO LYS ASN LEU GLY THR VAL GLY ALA VAL SEQRES 16 B 332 ALA LEU ASP CYS LYS GLY ASN VAL ALA TYR ALA THR SER SEQRES 17 B 332 THR GLY GLY ILE VAL ASN LYS MET THR GLY ARG VAL GLY SEQRES 18 B 332 ASP SER PRO CYS ILE GLY SER GLY GLY TYR ALA ASP ASN SEQRES 19 B 332 SER ILE GLY ALA VAL SER THR THR GLY HIS GLY GLU SER SEQRES 20 B 332 ILE LEU LYS VAL ASN LEU ALA ARG LEU ALA LEU PHE HIS SEQRES 21 B 332 LEU GLU GLN GLY GLY LYS THR VAL ASP GLU ALA ALA ASP SEQRES 22 B 332 LEU ALA LEU GLY TYR MET LYS SER ARG LEU LYS GLY LEU SEQRES 23 B 332 GLY GLY LEU ILE LEU VAL SER ARG THR GLY GLU TRP VAL SEQRES 24 B 332 ALA LYS TRP THR SER THR SER MET PRO TRP ALA ALA VAL SEQRES 25 B 332 LYS GLY GLY LYS VAL HIS ALA GLY ILE ASP LEU ASN ASP SEQRES 26 B 332 THR THR VAL THR ASP LEU CYS HET NA A 401 1 HET ASP A 402 9 HET NA B 401 1 HET ASP B 402 9 HETNAM NA SODIUM ION HETNAM ASP ASPARTIC ACID FORMUL 3 NA 2(NA 1+) FORMUL 4 ASP 2(C4 H7 N O4) FORMUL 7 HOH *78(H2 O) HELIX 1 1 CYS A 17 ALA A 40 1 24 HELIX 2 2 SER A 43 ASP A 58 1 16 HELIX 3 3 ASN A 100 THR A 112 1 13 HELIX 4 4 GLY A 119 ASP A 128 1 10 HELIX 5 5 PRO A 135 VAL A 140 5 6 HELIX 6 6 THR A 141 GLU A 154 1 14 HELIX 7 7 HIS A 221 ASN A 229 1 9 HELIX 8 8 ASN A 229 GLY A 241 1 13 HELIX 9 9 THR A 244 LYS A 261 1 18 HELIX 10 10 CYS B 17 ALA B 40 1 24 HELIX 11 11 SER B 43 ASP B 58 1 16 HELIX 12 12 ASN B 100 THR B 112 1 13 HELIX 13 13 GLY B 119 MET B 129 1 11 HELIX 14 14 PRO B 135 VAL B 140 5 6 HELIX 15 15 THR B 141 GLU B 154 1 14 HELIX 16 16 HIS B 221 ASN B 229 1 9 HELIX 17 17 ASN B 229 GLN B 240 1 12 HELIX 18 18 THR B 244 LYS B 261 1 18 SHEET 1 A 9 PHE A 116 THR A 118 0 SHEET 2 A 9 ALA A 89 VAL A 95 1 N ALA A 91 O LEU A 117 SHEET 3 A 9 MET A 77 ASP A 83 -1 N MET A 77 O VAL A 95 SHEET 4 A 9 VAL A 180 THR A 186 -1 O THR A 186 N ASP A 78 SHEET 5 A 9 VAL A 169 LEU A 174 -1 N VAL A 169 O SER A 185 SHEET 6 A 9 VAL A 4 HIS A 8 -1 N HIS A 8 O GLY A 170 SHEET 7 A 9 TRP A 286 LYS A 290 -1 O VAL A 289 N LEU A 5 SHEET 8 A 9 LYS A 293 GLY A 297 -1 O HIS A 295 N ALA A 288 SHEET 9 A 9 THR A 304 ASP A 307 -1 O THR A 306 N VAL A 294 SHEET 1 B 4 GLY A 207 ASP A 210 0 SHEET 2 B 4 GLY A 214 GLY A 220 -1 O VAL A 216 N TYR A 208 SHEET 3 B 4 GLY A 264 SER A 270 -1 O GLY A 265 N THR A 219 SHEET 4 B 4 TRP A 275 TRP A 279 -1 O LYS A 278 N LEU A 266 SHEET 1 C 8 LEU B 117 THR B 118 0 SHEET 2 C 8 ALA B 89 VAL B 95 1 N ALA B 91 O LEU B 117 SHEET 3 C 8 MET B 77 ASP B 83 -1 N ILE B 81 O GLY B 90 SHEET 4 C 8 VAL B 180 THR B 186 -1 O THR B 186 N ASP B 78 SHEET 5 C 8 VAL B 169 LEU B 174 -1 N VAL B 169 O SER B 185 SHEET 6 C 8 VAL B 4 HIS B 8 -1 N VAL B 6 O VAL B 172 SHEET 7 C 8 TRP B 286 LYS B 290 -1 O ALA B 287 N VAL B 7 SHEET 8 C 8 LYS B 293 GLY B 297 -1 O LYS B 293 N LYS B 290 SHEET 1 D 4 GLY B 207 ASP B 210 0 SHEET 2 D 4 GLY B 214 GLY B 220 -1 O VAL B 216 N TYR B 208 SHEET 3 D 4 GLY B 264 SER B 270 -1 O GLY B 265 N THR B 219 SHEET 4 D 4 TRP B 275 TRP B 279 -1 O LYS B 278 N LEU B 266 LINK O LEU A 55 NA NA A 401 1555 1555 2.85 LINK O GLU A 56 NA NA A 401 1555 1555 2.45 LINK O ASP A 58 NA NA A 401 1555 1555 2.32 LINK O PHE A 61 NA NA A 401 1555 1555 2.69 LINK O ALA A 63 NA NA A 401 1555 1555 2.19 LINK O HIS A 65 NA NA A 401 1555 1555 2.34 LINK O LEU B 55 NA NA B 401 1555 1555 2.75 LINK O GLU B 56 NA NA B 401 1555 1555 2.36 LINK O ASP B 58 NA NA B 401 1555 1555 2.30 LINK O PHE B 61 NA NA B 401 1555 1555 2.65 LINK O ALA B 63 NA NA B 401 1555 1555 2.29 LINK O HIS B 65 NA NA B 401 1555 1555 2.21 SITE 1 AC1 6 LEU A 55 GLU A 56 ASP A 58 PHE A 61 SITE 2 AC1 6 ALA A 63 HIS A 65 SITE 1 AC2 11 THR A 168 THR A 186 GLY A 188 ILE A 189 SITE 2 AC2 11 ARG A 196 ASP A 199 THR A 219 GLY A 220 SITE 3 AC2 11 GLY A 222 HOH A 516 HOH A 540 SITE 1 AC3 6 LEU B 55 GLU B 56 ASP B 58 PHE B 61 SITE 2 AC3 6 ALA B 63 HIS B 65 SITE 1 AC4 10 THR B 168 GLY B 188 ILE B 189 ARG B 196 SITE 2 AC4 10 ASP B 199 THR B 219 GLY B 220 GLY B 222 SITE 3 AC4 10 HOH B 519 HOH B 520 CRYST1 114.580 114.580 138.590 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008728 0.005039 0.000000 0.00000 SCALE2 0.000000 0.010078 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007216 0.00000