HEADER IMMUNE SYSTEM 19-DEC-13 4O4Y TITLE CRYSTAL STRUCTURE OF THE ANTI-HINGE RABBIT ANTIBODY 2095-2 IN COMPLEX TITLE 2 WITH IDES HINGE PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2095-2 LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 FRAGMENT: SEE REMARK 999; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 2095-2 HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: IDES HINGE PEPTIDE; COMPND 12 CHAIN: A; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: RABBIT, HUMAN; SOURCE 4 ORGANISM_TAXID: 9986, 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS, HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: RABBIT, HUMAN; SOURCE 11 ORGANISM_TAXID: 9986, 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606 KEYWDS IMMUNOGLOBULIN FOLD, ANTIBODY, HINGE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR T.J.MALIA,A.TEPLYAKOV,J.LUO,G.L.GILLILAND REVDAT 5 20-SEP-23 4O4Y 1 REMARK REVDAT 4 25-DEC-19 4O4Y 1 SEQRES LINK REVDAT 3 06-AUG-14 4O4Y 1 JRNL REVDAT 2 02-APR-14 4O4Y 1 JRNL REVDAT 1 26-MAR-14 4O4Y 0 JRNL AUTH T.J.MALIA,A.TEPLYAKOV,R.J.BREZSKI,J.LUO,M.KINDER,R.W.SWEET, JRNL AUTH 2 J.C.ALMAGRO,R.E.JORDAN,G.L.GILLILAND JRNL TITL STRUCTURE AND SPECIFICITY OF AN ANTIBODY TARGETING A JRNL TITL 2 PROTEOLYTICALLY CLEAVED IGG HINGE. JRNL REF PROTEINS V. 82 1656 2014 JRNL REFN ISSN 0887-3585 JRNL PMID 24638881 JRNL DOI 10.1002/PROT.24545 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.0 REMARK 3 NUMBER OF REFLECTIONS : 35290 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1875 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1408 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 49.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.4640 REMARK 3 BIN FREE R VALUE SET COUNT : 91 REMARK 3 BIN FREE R VALUE : 0.5940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3291 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 492 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : 0.66000 REMARK 3 B33 (A**2) : -0.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.155 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.217 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3544 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2362 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4869 ; 1.368 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5814 ; 0.842 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 487 ; 6.283 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;36.412 ;24.320 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 552 ;12.914 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;13.560 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 561 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3985 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 684 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2279 ; 0.666 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 927 ; 0.183 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3729 ; 1.162 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1265 ; 1.701 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1119 ; 2.689 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 110 REMARK 3 ORIGIN FOR THE GROUP (A): -10.0098 32.5809 -33.3543 REMARK 3 T TENSOR REMARK 3 T11: 0.0497 T22: 0.0621 REMARK 3 T33: 0.0743 T12: 0.0076 REMARK 3 T13: -0.0217 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 1.7081 L22: 1.3848 REMARK 3 L33: 1.9781 L12: -0.4092 REMARK 3 L13: -0.4911 L23: 0.1602 REMARK 3 S TENSOR REMARK 3 S11: -0.0091 S12: -0.0138 S13: 0.3174 REMARK 3 S21: 0.0865 S22: -0.0110 S23: -0.0760 REMARK 3 S31: -0.2744 S32: -0.1060 S33: 0.0201 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1 H 113 REMARK 3 ORIGIN FOR THE GROUP (A): -0.1474 14.1693 -33.8205 REMARK 3 T TENSOR REMARK 3 T11: 0.0246 T22: 0.0702 REMARK 3 T33: 0.0232 T12: -0.0129 REMARK 3 T13: -0.0066 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 1.1048 L22: 1.3269 REMARK 3 L33: 2.2264 L12: -0.3691 REMARK 3 L13: 0.6894 L23: -0.4580 REMARK 3 S TENSOR REMARK 3 S11: 0.0701 S12: 0.0710 S13: -0.0515 REMARK 3 S21: 0.0373 S22: -0.0686 S23: -0.0218 REMARK 3 S31: 0.1714 S32: 0.1054 S33: -0.0014 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 111 L 300 REMARK 3 ORIGIN FOR THE GROUP (A): -15.3641 22.2074 2.7959 REMARK 3 T TENSOR REMARK 3 T11: 0.2578 T22: 0.1856 REMARK 3 T33: 0.0639 T12: 0.1250 REMARK 3 T13: 0.1178 T23: 0.0397 REMARK 3 L TENSOR REMARK 3 L11: 2.8047 L22: 5.2062 REMARK 3 L33: 2.5043 L12: -2.6597 REMARK 3 L13: -0.3842 L23: 0.0269 REMARK 3 S TENSOR REMARK 3 S11: -0.4587 S12: -0.4796 S13: -0.1275 REMARK 3 S21: 0.7074 S22: 0.4317 S23: 0.2025 REMARK 3 S31: 0.1855 S32: -0.0517 S33: 0.0269 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 114 H 214 REMARK 3 ORIGIN FOR THE GROUP (A): -15.8904 8.9105 -6.1340 REMARK 3 T TENSOR REMARK 3 T11: 0.2292 T22: 0.0805 REMARK 3 T33: 0.3644 T12: -0.0209 REMARK 3 T13: 0.1574 T23: 0.0448 REMARK 3 L TENSOR REMARK 3 L11: 2.4439 L22: 5.3192 REMARK 3 L33: 2.0413 L12: -3.2688 REMARK 3 L13: -0.8019 L23: 0.8877 REMARK 3 S TENSOR REMARK 3 S11: -0.2822 S12: -0.0467 S13: -0.6497 REMARK 3 S21: 0.6501 S22: 0.1241 S23: 1.2812 REMARK 3 S31: 0.1089 S32: -0.3102 S33: 0.1581 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 230 A 236 REMARK 3 ORIGIN FOR THE GROUP (A): 1.1649 25.8654 -50.1496 REMARK 3 T TENSOR REMARK 3 T11: 0.1131 T22: 0.1845 REMARK 3 T33: 0.0527 T12: -0.0015 REMARK 3 T13: 0.0407 T23: 0.0427 REMARK 3 L TENSOR REMARK 3 L11: 14.2533 L22: 10.1550 REMARK 3 L33: 24.3097 L12: 5.3100 REMARK 3 L13: -13.8163 L23: -4.4101 REMARK 3 S TENSOR REMARK 3 S11: 0.1174 S12: 0.8441 S13: 0.2460 REMARK 3 S21: -0.7146 S22: 0.2043 S23: -0.3897 REMARK 3 S31: -0.6073 S32: 0.0600 S33: -0.3217 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4O4Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084047. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX HF REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK 9.6L REMARK 200 DATA SCALING SOFTWARE : D*TREK 9.6L REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37290 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 51.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.24200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4MA3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 8.5, 18.33% PEG3350, REMARK 280 0.2 M LITHIUM SULFATE, 5% ISOPROPANOL, CRYOPROTECTION: MOTHER REMARK 280 LIQUOR + 20% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 32.20500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.68500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.20500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.68500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH L 726 LIES ON A SPECIAL POSITION. REMARK 375 HOH H 590 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU L 299 REMARK 465 SER H 216 REMARK 465 CYS H 217 REMARK 465 HIS H 218 REMARK 465 HIS H 219 REMARK 465 HIS H 220 REMARK 465 HIS H 221 REMARK 465 HIS H 222 REMARK 465 HIS H 223 REMARK 465 THR A 223 REMARK 465 HIS A 224 REMARK 465 THR A 225 REMARK 465 SER A 226 REMARK 465 PRO A 227 REMARK 465 PRO A 228 REMARK 465 SER A 229 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS L 31 -2.47 68.88 REMARK 500 ALA L 52 -45.26 73.72 REMARK 500 ALA L 85 173.88 178.24 REMARK 500 LYS L 196 -61.10 -106.55 REMARK 500 SER H 82 80.65 -150.39 REMARK 500 LEU H 97 -27.77 -177.80 REMARK 500 ASP H 145 63.43 67.49 REMARK 500 THR H 192 -52.82 -145.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL L 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL L 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL H 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN A OF IDES HINGE PEPTIDE REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4MA3 RELATED DB: PDB REMARK 900 RELATED ID: 4O51 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUE L CYS 300 IS A CYSTEINYLATION OF RESIDUE L CYS 81. DBREF 4O4Y L 1 300 PDB 4O4Y 4O4Y 1 300 DBREF 4O4Y H 1 223 PDB 4O4Y 4O4Y 1 223 DBREF 4O4Y A 223 236 PDB 4O4Y 4O4Y 223 236 SEQRES 1 L 220 PCA VAL LEU THR GLN THR PRO SER SER VAL SER ALA ALA SEQRES 2 L 220 VAL GLY GLY THR VAL THR ILE ASN CYS GLN ALA SER GLN SEQRES 3 L 220 SER VAL TYR ASN LYS ASN TYR LEU ALA TRP TYR GLN GLN SEQRES 4 L 220 LYS PRO GLY GLN PRO PRO LYS ARG LEU ILE TYR SER ALA SEQRES 5 L 220 SER THR LEU ALA SER GLY VAL SER SER ARG PHE LYS GLY SEQRES 6 L 220 SER GLY SER GLY THR GLN PHE THR LEU THR ILE SER ASP SEQRES 7 L 220 VAL GLN CYS ASP ASP VAL ALA THR TYR TYR CYS LEU GLY SEQRES 8 L 220 SER TYR ASP CYS ASN ARG ALA GLU CYS HIS ALA PHE GLY SEQRES 9 L 220 GLY GLY THR LYS VAL VAL VAL GLU VAL ARG THR VAL ALA SEQRES 10 L 220 ALA PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN SEQRES 11 L 220 LEU LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN SEQRES 12 L 220 ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL SEQRES 13 L 220 ASP ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL SEQRES 14 L 220 THR GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SEQRES 15 L 220 SER THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS SEQRES 16 L 220 LYS VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SEQRES 17 L 220 SER PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 H 223 PCA SER VAL GLU GLU SER GLY GLY ARG LEU VAL THR PRO SEQRES 2 H 223 GLY THR PRO LEU THR LEU THR CYS THR VAL SER GLY PHE SEQRES 3 H 223 SER LEU SER SER TYR PRO MET ASN TRP VAL ARG GLN ALA SEQRES 4 H 223 PRO GLY LYS GLY LEU GLU TRP ILE GLY GLY ILE GLY THR SEQRES 5 H 223 SER GLY ASN ILE TRP TYR ALA SER TRP ALA LYS GLY ARG SEQRES 6 H 223 PHE ILE ILE SER ARG ALA SER SER THR THR VAL ASP LEU SEQRES 7 H 223 LYS VAL THR SER PRO THR THR GLU ASP THR ALA THR TYR SEQRES 8 H 223 PHE CYS ALA ARG GLY LEU TYR ASN ASP TYR THR VAL TRP SEQRES 9 H 223 GLY PRO GLY THR LEU VAL THR VAL SER SER ALA SER THR SEQRES 10 H 223 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 11 H 223 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 12 H 223 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 13 H 223 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 14 H 223 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 15 H 223 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 16 H 223 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 17 H 223 ASP LYS LYS VAL GLU PRO LYS SER CYS HIS HIS HIS HIS SEQRES 18 H 223 HIS HIS SEQRES 1 A 14 THR HIS THR SER PRO PRO SER PRO ALA PRO GLU LEU LEU SEQRES 2 A 14 GLY MODRES 4O4Y PCA L 1 GLN PYROGLUTAMIC ACID MODRES 4O4Y PCA H 1 GLN PYROGLUTAMIC ACID HET PCA L 1 8 HET PCA H 1 8 HET GOL L 401 6 HET GOL L 402 6 HET GOL H 301 6 HET GOL H 302 6 HET GOL H 303 6 HETNAM PCA PYROGLUTAMIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 PCA 2(C5 H7 N O3) FORMUL 4 GOL 5(C3 H8 O3) FORMUL 9 HOH *492(H2 O) HELIX 1 1 VAL L 28 ASN L 32 5 5 HELIX 2 2 GLN L 80 VAL L 84 5 5 HELIX 3 3 SER L 127 SER L 133 1 7 HELIX 4 4 LYS L 189 HIS L 195 1 7 HELIX 5 5 SER H 27 TYR H 31 5 5 HELIX 6 6 SER H 60 LYS H 63 5 4 HELIX 7 7 THR H 84 THR H 88 5 5 HELIX 8 8 SER H 157 ALA H 159 5 3 HELIX 9 9 SER H 188 LEU H 190 5 3 HELIX 10 10 LYS H 202 ASN H 205 5 4 SHEET 1 A 4 LEU L 3 THR L 6 0 SHEET 2 A 4 VAL L 18 ALA L 24 -1 O ASN L 21 N THR L 6 SHEET 3 A 4 GLN L 71 ILE L 76 -1 O LEU L 74 N ILE L 20 SHEET 4 A 4 PHE L 63 SER L 68 -1 N LYS L 64 O THR L 75 SHEET 1 B 6 SER L 9 ALA L 13 0 SHEET 2 B 6 THR L 107 GLU L 112 1 O LYS L 108 N VAL L 10 SHEET 3 B 6 ALA L 85 SER L 92 -1 N ALA L 85 O VAL L 109 SHEET 4 B 6 LEU L 34 GLN L 39 -1 N TYR L 37 O TYR L 88 SHEET 5 B 6 LYS L 46 TYR L 50 -1 O LYS L 46 N GLN L 38 SHEET 6 B 6 THR L 54 LEU L 55 -1 O THR L 54 N TYR L 50 SHEET 1 C 4 SER L 9 ALA L 13 0 SHEET 2 C 4 THR L 107 GLU L 112 1 O LYS L 108 N VAL L 10 SHEET 3 C 4 ALA L 85 SER L 92 -1 N ALA L 85 O VAL L 109 SHEET 4 C 4 HIS L 101 PHE L 103 -1 O ALA L 102 N GLY L 91 SHEET 1 D 4 SER L 120 PHE L 124 0 SHEET 2 D 4 THR L 135 PHE L 145 -1 O ASN L 143 N SER L 120 SHEET 3 D 4 TYR L 179 SER L 188 -1 O LEU L 187 N ALA L 136 SHEET 4 D 4 SER L 165 VAL L 169 -1 N GLN L 166 O THR L 184 SHEET 1 E 4 ALA L 159 LEU L 160 0 SHEET 2 E 4 LYS L 151 VAL L 156 -1 N VAL L 156 O ALA L 159 SHEET 3 E 4 VAL L 197 THR L 203 -1 O GLU L 201 N GLN L 153 SHEET 4 E 4 VAL L 211 ASN L 216 -1 O VAL L 211 N VAL L 202 SHEET 1 F 4 SER H 2 SER H 6 0 SHEET 2 F 4 LEU H 17 SER H 24 -1 O THR H 22 N GLU H 4 SHEET 3 F 4 THR H 75 VAL H 80 -1 O VAL H 80 N LEU H 17 SHEET 4 F 4 PHE H 66 SER H 72 -1 N ILE H 67 O LYS H 79 SHEET 1 G 6 LEU H 10 VAL H 11 0 SHEET 2 G 6 THR H 108 VAL H 112 1 O THR H 111 N VAL H 11 SHEET 3 G 6 ALA H 89 ARG H 95 -1 N ALA H 89 O VAL H 110 SHEET 4 G 6 MET H 33 GLN H 38 -1 N VAL H 36 O PHE H 92 SHEET 5 G 6 GLU H 45 ILE H 50 -1 O ILE H 50 N MET H 33 SHEET 6 G 6 ILE H 56 TYR H 58 -1 O TRP H 57 N GLY H 49 SHEET 1 H 4 LEU H 10 VAL H 11 0 SHEET 2 H 4 THR H 108 VAL H 112 1 O THR H 111 N VAL H 11 SHEET 3 H 4 ALA H 89 ARG H 95 -1 N ALA H 89 O VAL H 110 SHEET 4 H 4 VAL H 103 TRP H 104 -1 O VAL H 103 N ARG H 95 SHEET 1 I 4 SER H 121 LEU H 125 0 SHEET 2 I 4 THR H 136 TYR H 146 -1 O LEU H 142 N PHE H 123 SHEET 3 I 4 TYR H 177 PRO H 186 -1 O LEU H 179 N VAL H 143 SHEET 4 I 4 VAL H 164 THR H 166 -1 N HIS H 165 O VAL H 182 SHEET 1 J 4 SER H 121 LEU H 125 0 SHEET 2 J 4 THR H 136 TYR H 146 -1 O LEU H 142 N PHE H 123 SHEET 3 J 4 TYR H 177 PRO H 186 -1 O LEU H 179 N VAL H 143 SHEET 4 J 4 VAL H 170 LEU H 171 -1 N VAL H 170 O SER H 178 SHEET 1 K 3 THR H 152 TRP H 155 0 SHEET 2 K 3 TYR H 195 HIS H 201 -1 O ASN H 198 N SER H 154 SHEET 3 K 3 THR H 206 VAL H 212 -1 O THR H 206 N HIS H 201 SSBOND 1 CYS L 22 CYS L 89 1555 1555 2.14 SSBOND 2 CYS L 81 CYS L 300 1555 1555 2.04 SSBOND 3 CYS L 95 CYS L 100 1555 1555 2.09 SSBOND 4 CYS L 140 CYS L 200 1555 1555 2.03 SSBOND 5 CYS H 21 CYS H 93 1555 1555 2.02 SSBOND 6 CYS H 141 CYS H 197 1555 1555 2.03 LINK C PCA L 1 N VAL L 2 1555 1555 1.33 LINK C PCA H 1 N SER H 2 1555 1555 1.33 CISPEP 1 THR L 6 PRO L 7 0 -6.05 CISPEP 2 TYR L 146 PRO L 147 0 2.83 CISPEP 3 PHE H 147 PRO H 148 0 -5.82 CISPEP 4 GLU H 149 PRO H 150 0 -0.19 CISPEP 5 GLU H 149 PRO H 150 0 -1.87 SITE 1 AC1 6 HIS H 165 THR L 170 GLU L 171 ASP L 173 SITE 2 AC1 6 HOH L 545 HOH L 568 SITE 1 AC2 8 GLY H 41 LYS H 42 SER L 8 TYR L 88 SITE 2 AC2 8 GLY L 105 GLY L 106 LYS L 108 HOH L 699 SITE 1 AC3 8 GLY H 64 PHE H 66 ILE H 67 ASP H 100 SITE 2 AC3 8 TYR L 50 LEU L 55 ALA L 56 SER L 57 SITE 1 AC4 2 SER H 6 GLY H 7 SITE 1 AC5 4 VAL H 153 THR H 166 HOH H 554 HOH H 646 SITE 1 AC6 27 HOH A 301 HOH A 302 HOH A 303 HOH A 304 SITE 2 AC6 27 HOH A 305 HOH A 306 HOH A 308 PRO H 32 SITE 3 AC6 27 ASN H 34 GLY H 49 GLY H 51 SER H 53 SITE 4 AC6 27 ASN H 55 TRP H 57 GLY H 96 LEU H 97 SITE 5 AC6 27 TYR H 98 ASN H 99 TYR H 101 TYR L 29 SITE 6 AC6 27 TYR L 93 ASP L 94 CYS L 95 ASN L 96 SITE 7 AC6 27 HIS L 101 HOH L 503 HOH L 536 CRYST1 64.410 89.370 83.390 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015526 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011189 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011992 0.00000 HETATM 1 N PCA L 1 6.140 32.587 -37.039 1.00 23.51 N ANISOU 1 N PCA L 1 2025 3052 3854 -709 -161 254 N HETATM 2 CA PCA L 1 4.976 33.350 -36.619 1.00 24.30 C ANISOU 2 CA PCA L 1 2253 3043 3935 -703 -188 223 C HETATM 3 CB PCA L 1 3.843 33.017 -37.573 1.00 23.23 C ANISOU 3 CB PCA L 1 2219 2892 3714 -618 -120 303 C HETATM 4 CG PCA L 1 4.489 32.553 -38.862 1.00 23.30 C ANISOU 4 CG PCA L 1 2171 2958 3725 -616 -26 396 C HETATM 5 CD PCA L 1 5.878 32.203 -38.401 1.00 23.17 C ANISOU 5 CD PCA L 1 2012 3020 3770 -664 -55 358 C HETATM 6 OE PCA L 1 6.685 31.613 -39.121 1.00 23.24 O ANISOU 6 OE PCA L 1 1937 3107 3786 -656 5 407 O HETATM 7 C PCA L 1 4.540 32.999 -35.197 1.00 24.44 C ANISOU 7 C PCA L 1 2304 3093 3890 -657 -297 120 C HETATM 8 O PCA L 1 4.452 31.814 -34.843 1.00 24.37 O ANISOU 8 O PCA L 1 2285 3181 3794 -573 -327 113 O