HEADER OXIDOREDUCTASE 20-DEC-13 4O5Q TITLE CRYSTAL STRUCTURE OF THE ALKYLHYDROPEROXIDE REDUCTASE AHPF FROM TITLE 2 ESCHERICHIA COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALKYL HYDROPEROXIDE REDUCTASE F52A PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.V.DIP,N.KAMARIAH,M.S.S.MANIMEKALAI,A.M.BALAKRISHNA,G.GRUBER REVDAT 4 08-NOV-23 4O5Q 1 REMARK LINK REVDAT 3 25-FEB-15 4O5Q 1 JRNL REVDAT 2 12-NOV-14 4O5Q 1 JRNL REVDAT 1 05-NOV-14 4O5Q 0 JRNL AUTH P.V.DIP,N.KAMARIAH,M.S.SUBRAMANIAN MANIMEKALAI,W.NARTEY, JRNL AUTH 2 A.M.BALAKRISHNA,F.EISENHABER,B.EISENHABER,G.GRUBER JRNL TITL STRUCTURE, MECHANISM AND ENSEMBLE FORMATION OF THE JRNL TITL 2 ALKYLHYDROPEROXIDE REDUCTASE SUBUNITS AHPC AND AHPF FROM JRNL TITL 3 ESCHERICHIA COLI JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2848 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25372677 JRNL DOI 10.1107/S1399004714019233 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.BIEGER,L.O.ESSEN REMARK 1 TITL CRYSTAL STRUCTURE OF THE CATALYTIC CORE COMPONENT OF THE REMARK 1 TITL 2 ALKYLHYDROPEROXIDE REDUCTASE AHPF FROM ESCHERICHIA COLI REMARK 1 REF J.MOL.BIOL. V. 307 1 2010 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH Z.A.WOOD,L.B.POOLE,P.A.KARPLUS REMARK 1 TITL STRUCTURE OF INTACT AHPF REVEALS A MIRRORED THIOREDOXIN-LIKE REMARK 1 TITL 2 ACTIVE SITE AND IMPLIES LARGE DOMAIN ROTATIONS DURING REMARK 1 TITL 3 CATALYSIS REMARK 1 REF BIOCHEMISTRY V. 40 3900 2001 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 47447 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2399 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.6229 - 5.1182 1.00 2758 138 0.1895 0.2333 REMARK 3 2 5.1182 - 4.0671 0.99 2660 155 0.1292 0.1676 REMARK 3 3 4.0671 - 3.5544 1.00 2674 127 0.1263 0.1744 REMARK 3 4 3.5544 - 3.2300 1.00 2663 147 0.1287 0.1506 REMARK 3 5 3.2300 - 2.9988 1.00 2662 162 0.1300 0.1875 REMARK 3 6 2.9988 - 2.8222 1.00 2648 150 0.1273 0.1904 REMARK 3 7 2.8222 - 2.6810 1.00 2668 128 0.1190 0.1848 REMARK 3 8 2.6810 - 2.5644 1.00 2649 121 0.1248 0.1744 REMARK 3 9 2.5644 - 2.4658 1.00 2651 155 0.1286 0.1835 REMARK 3 10 2.4658 - 2.3807 1.00 2644 152 0.1345 0.1882 REMARK 3 11 2.3807 - 2.3063 1.00 2650 128 0.1324 0.1832 REMARK 3 12 2.3063 - 2.2405 1.00 2626 132 0.1374 0.2054 REMARK 3 13 2.2405 - 2.1815 1.00 2660 150 0.1386 0.1839 REMARK 3 14 2.1815 - 2.1283 1.00 2654 151 0.1516 0.2038 REMARK 3 15 2.1283 - 2.0799 1.00 2621 131 0.1666 0.2314 REMARK 3 16 2.0799 - 2.0357 0.99 2618 148 0.1802 0.2209 REMARK 3 17 2.0357 - 2.0000 0.95 2542 124 0.2029 0.2512 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.33000 REMARK 3 B22 (A**2) : -0.15000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 4294 REMARK 3 ANGLE : 1.408 5800 REMARK 3 CHIRALITY : 0.080 649 REMARK 3 PLANARITY : 0.007 732 REMARK 3 DIHEDRAL : 16.381 1616 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.7928 -21.5944 -10.5886 REMARK 3 T TENSOR REMARK 3 T11: 0.4717 T22: 0.2803 REMARK 3 T33: 0.1996 T12: -0.0412 REMARK 3 T13: 0.0649 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.4943 L22: 0.4790 REMARK 3 L33: 0.7340 L12: -0.4781 REMARK 3 L13: -0.0809 L23: -0.0606 REMARK 3 S TENSOR REMARK 3 S11: -0.1027 S12: 0.1440 S13: -0.0595 REMARK 3 S21: 0.2036 S22: 0.0601 S23: 0.0169 REMARK 3 S31: 0.1430 S32: 0.0035 S33: -0.0005 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 151 THROUGH 300 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.3459 -22.4208 27.5841 REMARK 3 T TENSOR REMARK 3 T11: 0.2867 T22: 0.2380 REMARK 3 T33: 0.1945 T12: 0.0028 REMARK 3 T13: -0.0094 T23: 0.0361 REMARK 3 L TENSOR REMARK 3 L11: -0.1830 L22: 0.0583 REMARK 3 L33: 0.3381 L12: -0.0905 REMARK 3 L13: 0.0298 L23: -0.2263 REMARK 3 S TENSOR REMARK 3 S11: 0.0339 S12: 0.0213 S13: 0.0222 REMARK 3 S21: -0.1385 S22: 0.0158 S23: -0.0223 REMARK 3 S31: -0.1226 S32: -0.0739 S33: 0.0134 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 301 THROUGH 450 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.9456 -34.7220 61.9526 REMARK 3 T TENSOR REMARK 3 T11: 0.1454 T22: 0.1974 REMARK 3 T33: 0.2457 T12: 0.0069 REMARK 3 T13: -0.0204 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.2511 L22: 0.2334 REMARK 3 L33: 0.3281 L12: 0.0584 REMARK 3 L13: -0.2428 L23: 0.0135 REMARK 3 S TENSOR REMARK 3 S11: -0.0330 S12: 0.0228 S13: 0.0216 REMARK 3 S21: 0.0302 S22: 0.0123 S23: 0.1396 REMARK 3 S31: 0.0639 S32: -0.0188 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 451 THROUGH 521 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.5825 -42.7775 46.8206 REMARK 3 T TENSOR REMARK 3 T11: 0.1369 T22: 0.1643 REMARK 3 T33: 0.1781 T12: -0.0119 REMARK 3 T13: -0.0042 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.1740 L22: 0.4532 REMARK 3 L33: 0.1470 L12: 0.1389 REMARK 3 L13: 0.0877 L23: -0.1237 REMARK 3 S TENSOR REMARK 3 S11: -0.0371 S12: 0.0121 S13: -0.0137 REMARK 3 S21: -0.0704 S22: 0.0291 S23: -0.0181 REMARK 3 S31: 0.0150 S32: -0.0127 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 4O5Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000084075. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47454 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.49600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1HYU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA-HEPES, 2.5%(V/V) PEG400, 2M REMARK 280 AMMONIUM SULFATE, 10MM CADMIUM CHLORIDE, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.24700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.34800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.24700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.34800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 22960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -212.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -51.57696 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 112.75783 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG CYS A 129 HG CYS A 132 1.08 REMARK 500 HH12 ARG A 401 O HOH A 1144 1.51 REMARK 500 HE ARG A 244 O HOH A 1057 1.56 REMARK 500 HH11 ARG A 113 O HOH A 860 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 28 -151.54 -110.26 REMARK 500 SER A 47 129.99 -172.43 REMARK 500 LEU A 83 -148.13 -95.91 REMARK 500 PHE A 159 63.84 -102.25 REMARK 500 VAL A 253 -99.24 -99.00 REMARK 500 SER A 260 -8.79 92.69 REMARK 500 ALA A 321 57.28 -142.55 REMARK 500 THR A 339 -4.35 72.46 REMARK 500 LYS A 519 53.14 -90.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 A 617 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 614 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 110 OE2 REMARK 620 2 GLU A 110 OE1 54.3 REMARK 620 3 HIS A 114 NE2 69.1 78.9 REMARK 620 4 HOH A1046 O 106.4 159.7 88.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CD A 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 615 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 616 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 617 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 618 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 619 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 620 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 621 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 622 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 623 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 624 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 625 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FL2 RELATED DB: PDB REMARK 900 RELATED ID: 4O5U RELATED DB: PDB REMARK 900 RELATED ID: 4O5R RELATED DB: PDB DBREF 4O5Q A 1 521 UNP P35340 AHPF_ECOLI 1 521 SEQRES 1 A 521 MET LEU ASP THR ASN MET LYS THR GLN LEU LYS ALA TYR SEQRES 2 A 521 LEU GLU LYS LEU THR LYS PRO VAL GLU LEU ILE ALA THR SEQRES 3 A 521 LEU ASP ASP SER ALA LYS SER ALA GLU ILE LYS GLU LEU SEQRES 4 A 521 LEU ALA GLU ILE ALA GLU LEU SER ASP LYS VAL THR PHE SEQRES 5 A 521 LYS GLU ASP ASN SER LEU PRO VAL ARG LYS PRO SER PHE SEQRES 6 A 521 LEU ILE THR ASN PRO GLY SER ASN GLN GLY PRO ARG PHE SEQRES 7 A 521 ALA GLY SER PRO LEU GLY HIS GLU PHE THR SER LEU VAL SEQRES 8 A 521 LEU ALA LEU LEU TRP THR GLY GLY HIS PRO SER LYS GLU SEQRES 9 A 521 ALA GLN SER LEU LEU GLU GLN ILE ARG HIS ILE ASP GLY SEQRES 10 A 521 ASP PHE GLU PHE GLU THR TYR TYR SER LEU SER CYS HIS SEQRES 11 A 521 ASN CYS PRO ASP VAL VAL GLN ALA LEU ASN LEU MET SER SEQRES 12 A 521 VAL LEU ASN PRO ARG ILE LYS HIS THR ALA ILE ASP GLY SEQRES 13 A 521 GLY THR PHE GLN ASN GLU ILE THR ASP ARG ASN VAL MET SEQRES 14 A 521 GLY VAL PRO ALA VAL PHE VAL ASN GLY LYS GLU PHE GLY SEQRES 15 A 521 GLN GLY ARG MET THR LEU THR GLU ILE VAL ALA LYS ILE SEQRES 16 A 521 ASP THR GLY ALA GLU LYS ARG ALA ALA GLU GLU LEU ASN SEQRES 17 A 521 LYS ARG ASP ALA TYR ASP VAL LEU ILE VAL GLY SER GLY SEQRES 18 A 521 PRO ALA GLY ALA ALA ALA ALA ILE TYR SER ALA ARG LYS SEQRES 19 A 521 GLY ILE ARG THR GLY LEU MET GLY GLU ARG PHE GLY GLY SEQRES 20 A 521 GLN ILE LEU ASP THR VAL ASP ILE GLU ASN TYR ILE SER SEQRES 21 A 521 VAL PRO LYS THR GLU GLY GLN LYS LEU ALA GLY ALA LEU SEQRES 22 A 521 LYS VAL HIS VAL ASP GLU TYR ASP VAL ASP VAL ILE ASP SEQRES 23 A 521 SER GLN SER ALA SER LYS LEU ILE PRO ALA ALA VAL GLU SEQRES 24 A 521 GLY GLY LEU HIS GLN ILE GLU THR ALA SER GLY ALA VAL SEQRES 25 A 521 LEU LYS ALA ARG SER ILE ILE VAL ALA THR GLY ALA LYS SEQRES 26 A 521 TRP ARG ASN MET ASN VAL PRO GLY GLU ASP GLN TYR ARG SEQRES 27 A 521 THR LYS GLY VAL THR TYR CYS PRO HIS CYS ASP GLY PRO SEQRES 28 A 521 LEU PHE LYS GLY LYS ARG VAL ALA VAL ILE GLY GLY GLY SEQRES 29 A 521 ASN SER GLY VAL GLU ALA ALA ILE ASP LEU ALA GLY ILE SEQRES 30 A 521 VAL GLU HIS VAL THR LEU LEU GLU PHE ALA PRO GLU MET SEQRES 31 A 521 LYS ALA ASP GLN VAL LEU GLN ASP LYS LEU ARG SER LEU SEQRES 32 A 521 LYS ASN VAL ASP ILE ILE LEU ASN ALA GLN THR THR GLU SEQRES 33 A 521 VAL LYS GLY ASP GLY SER LYS VAL VAL GLY LEU GLU TYR SEQRES 34 A 521 ARG ASP ARG VAL SER GLY ASP ILE HIS ASN ILE GLU LEU SEQRES 35 A 521 ALA GLY ILE PHE VAL GLN ILE GLY LEU LEU PRO ASN THR SEQRES 36 A 521 ASN TRP LEU GLU GLY ALA VAL GLU ARG ASN ARG MET GLY SEQRES 37 A 521 GLU ILE ILE ILE ASP ALA LYS CYS GLU THR ASN VAL LYS SEQRES 38 A 521 GLY VAL PHE ALA ALA GLY ASP CYS THR THR VAL PRO TYR SEQRES 39 A 521 LYS GLN ILE ILE ILE ALA THR GLY GLU GLY ALA LYS ALA SEQRES 40 A 521 SER LEU SER ALA PHE ASP TYR LEU ILE ARG THR LYS THR SEQRES 41 A 521 ALA HET FAD A 601 53 HET SO4 A 602 5 HET SO4 A 603 5 HET SO4 A 604 5 HET SO4 A 605 5 HET SO4 A 606 5 HET SO4 A 607 5 HET SO4 A 608 5 HET SO4 A 609 5 HET PGE A 610 24 HET PGE A 611 24 HET PGE A 612 24 HET GOL A 613 14 HET CD A 614 1 HET GOL A 615 14 HET PGE A 616 24 HET PG4 A 617 8 HET PGE A 618 24 HET GOL A 619 14 HET TRS A 620 20 HET PGE A 621 24 HET GOL A 622 14 HET GOL A 623 14 HET GOL A 624 14 HET GOL A 625 14 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM SO4 SULFATE ION HETNAM PGE TRIETHYLENE GLYCOL HETNAM GOL GLYCEROL HETNAM CD CADMIUM ION HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN TRS TRIS BUFFER FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 SO4 8(O4 S 2-) FORMUL 11 PGE 6(C6 H14 O4) FORMUL 14 GOL 7(C3 H8 O3) FORMUL 15 CD CD 2+ FORMUL 18 PG4 C8 H18 O5 FORMUL 21 TRS C4 H12 N O3 1+ FORMUL 27 HOH *503(H2 O) HELIX 1 1 ASP A 3 LYS A 16 1 14 HELIX 2 2 SER A 30 GLU A 45 1 16 HELIX 3 3 LEU A 83 HIS A 85 5 3 HELIX 4 4 GLU A 86 GLY A 98 1 13 HELIX 5 5 ALA A 105 HIS A 114 1 10 HELIX 6 6 ASN A 131 ASN A 146 1 16 HELIX 7 7 PHE A 159 ARG A 166 1 8 HELIX 8 8 THR A 187 ASP A 196 1 10 HELIX 9 9 ARG A 202 LYS A 209 1 8 HELIX 10 10 GLY A 221 LYS A 234 1 14 HELIX 11 11 GLY A 246 THR A 252 5 7 HELIX 12 12 GLY A 266 GLU A 279 1 14 HELIX 13 13 GLY A 333 ARG A 338 1 6 HELIX 14 14 CYS A 345 GLY A 350 1 6 HELIX 15 15 PRO A 351 LYS A 354 5 4 HELIX 16 16 GLY A 364 GLY A 376 1 13 HELIX 17 17 ASP A 393 SER A 402 1 10 HELIX 18 18 THR A 455 GLU A 459 5 5 HELIX 19 19 GLN A 496 THR A 518 1 23 SHEET 1 A 8 VAL A 50 GLU A 54 0 SHEET 2 A 8 VAL A 21 THR A 26 1 N LEU A 23 O THR A 51 SHEET 3 A 8 SER A 64 THR A 68 -1 O THR A 68 N GLU A 22 SHEET 4 A 8 ARG A 77 ALA A 79 -1 O PHE A 78 N PHE A 65 SHEET 5 A 8 ILE A 149 ASP A 155 1 O ASP A 155 N ALA A 79 SHEET 6 A 8 PHE A 119 TYR A 125 1 N THR A 123 O ILE A 154 SHEET 7 A 8 ALA A 173 VAL A 176 -1 O PHE A 175 N GLU A 122 SHEET 8 A 8 LYS A 179 GLN A 183 -1 O GLY A 182 N VAL A 174 SHEET 1 B 5 ASP A 283 ASP A 286 0 SHEET 2 B 5 THR A 238 GLY A 242 1 N LEU A 240 O ILE A 285 SHEET 3 B 5 VAL A 215 VAL A 218 1 N ILE A 217 O MET A 241 SHEET 4 B 5 ILE A 318 VAL A 320 1 O ILE A 319 N VAL A 218 SHEET 5 B 5 VAL A 483 ALA A 485 1 O PHE A 484 N VAL A 320 SHEET 1 C 2 ASP A 254 ILE A 255 0 SHEET 2 C 2 THR A 264 GLU A 265 -1 O THR A 264 N ILE A 255 SHEET 1 D 3 ALA A 290 ILE A 294 0 SHEET 2 D 3 HIS A 303 THR A 307 -1 O GLN A 304 N ILE A 294 SHEET 3 D 3 VAL A 312 ALA A 315 -1 O ALA A 315 N HIS A 303 SHEET 1 E 2 ALA A 324 TRP A 326 0 SHEET 2 E 2 LEU A 451 PRO A 453 -1 O LEU A 452 N LYS A 325 SHEET 1 F 5 VAL A 342 THR A 343 0 SHEET 2 F 5 GLY A 444 VAL A 447 1 O VAL A 447 N THR A 343 SHEET 3 F 5 ARG A 357 ILE A 361 1 N ALA A 359 O PHE A 446 SHEET 4 F 5 HIS A 380 LEU A 384 1 O LEU A 384 N VAL A 360 SHEET 5 F 5 VAL A 406 ILE A 409 1 O ILE A 409 N LEU A 383 SHEET 1 G 3 ALA A 412 GLY A 419 0 SHEET 2 G 3 VAL A 424 ASP A 431 -1 O GLU A 428 N THR A 415 SHEET 3 G 3 ILE A 437 GLU A 441 -1 O HIS A 438 N TYR A 429 SSBOND 1 CYS A 345 CYS A 348 1555 1555 2.07 LINK OE2 GLU A 110 CD CD A 614 1555 1555 2.33 LINK OE1 GLU A 110 CD CD A 614 1555 1555 2.49 LINK NE2 HIS A 114 CD CD A 614 1555 1555 2.63 LINK CD CD A 614 O HOH A1046 1555 1555 2.37 CISPEP 1 LYS A 62 PRO A 63 0 -1.50 CISPEP 2 VAL A 171 PRO A 172 0 -2.59 SITE 1 AC1 37 GLY A 219 GLY A 221 PRO A 222 ALA A 223 SITE 2 AC1 37 GLY A 242 GLU A 243 ARG A 244 GLY A 247 SITE 3 AC1 37 GLN A 248 THR A 252 ASN A 257 GLN A 288 SITE 4 AC1 37 SER A 289 ALA A 290 ALA A 321 THR A 322 SITE 5 AC1 37 GLY A 323 CYS A 348 ASN A 454 TRP A 457 SITE 6 AC1 37 GLY A 487 ASP A 488 LYS A 495 GLN A 496 SITE 7 AC1 37 ILE A 497 ALA A 500 GOL A 619 HOH A 701 SITE 8 AC1 37 HOH A 702 HOH A 736 HOH A 738 HOH A 739 SITE 9 AC1 37 HOH A 747 HOH A 748 HOH A 753 HOH A 814 SITE 10 AC1 37 HOH A 834 SITE 1 AC2 8 ALA A 105 GLN A 106 SER A 107 SER A 126 SITE 2 AC2 8 SER A 128 HOH A 930 HOH A1084 HOH A1085 SITE 1 AC3 5 GLY A 364 ASN A 365 SER A 366 PGE A 621 SITE 2 AC3 5 HOH A 785 SITE 1 AC4 9 PRO A 453 ASN A 454 THR A 455 ASN A 456 SITE 2 AC4 9 TRP A 457 HOH A 774 HOH A 834 HOH A 918 SITE 3 AC4 9 HOH A1117 SITE 1 AC5 8 PRO A 332 GLY A 333 GLU A 334 ASP A 335 SITE 2 AC5 8 GLN A 336 HOH A 865 HOH A 902 HOH A 903 SITE 1 AC6 4 ARG A 357 HIS A 380 HOH A 789 HOH A1141 SITE 1 AC7 5 HIS A 438 ASN A 439 HOH A 802 HOH A 842 SITE 2 AC7 5 HOH A1022 SITE 1 AC8 5 SER A 30 ALA A 31 HOH A 812 HOH A 958 SITE 2 AC8 5 HOH A1178 SITE 1 AC9 4 ASP A 473 ALA A 474 HOH A1064 HOH A1105 SITE 1 BC1 8 ASN A 439 GLU A 459 GLY A 460 ALA A 461 SITE 2 BC1 8 GLU A 463 ASN A 479 HOH A 915 HOH A1022 SITE 1 BC2 7 ILE A 471 GLU A 477 THR A 478 ASN A 479 SITE 2 BC2 7 HOH A 922 HOH A1131 HOH A1138 SITE 1 BC3 4 ILE A 236 ILE A 372 LYS A 519 HOH A1101 SITE 1 BC4 8 HIS A 100 PRO A 101 SER A 102 GLN A 106 SITE 2 BC4 8 ASN A 131 LEU A 145 HOH A1100 HOH A1114 SITE 1 BC5 5 HIS A 85 GLU A 110 HIS A 114 HIS A 130 SITE 2 BC5 5 HOH A1046 SITE 1 BC6 4 ARG A 233 GLY A 235 LYS A 354 HOH A1191 SITE 1 BC7 6 GLU A 477 THR A 478 ASN A 479 LYS A 481 SITE 2 BC7 6 GOL A 625 HOH A 921 SITE 1 BC8 4 PHE A 245 LYS A 274 HOH A 813 HOH A1017 SITE 1 BC9 6 GLU A 104 GLY A 156 GLN A 160 MET A 169 SITE 2 BC9 6 HOH A 930 HOH A1086 SITE 1 CC1 10 THR A 252 VAL A 253 ASP A 254 THR A 339 SITE 2 CC1 10 ASP A 349 FAD A 601 HOH A 702 HOH A 703 SITE 3 CC1 10 HOH A 815 HOH A1183 SITE 1 CC2 6 GLU A 416 ASN A 465 ARG A 466 HOH A 714 SITE 2 CC2 6 HOH A 923 HOH A1147 SITE 1 CC3 8 ARG A 327 SER A 366 VAL A 447 GLN A 448 SITE 2 CC3 8 ILE A 449 GLY A 450 LEU A 451 SO4 A 603 SITE 1 CC4 4 GLY A 341 PHE A 353 HOH A 706 HOH A1182 SITE 1 CC5 6 ASP A 335 GLN A 336 ARG A 338 LYS A 340 SITE 2 CC5 6 LYS A 391 HOH A1119 SITE 1 CC6 8 ASP A 28 ALA A 34 LYS A 37 GLU A 54 SITE 2 CC6 8 GLY A 300 ARG A 316 THR A 518 ALA A 521 SITE 1 CC7 7 GLU A 299 LYS A 481 ARG A 517 THR A 518 SITE 2 CC7 7 PGE A 616 HOH A 837 HOH A1129 CRYST1 106.494 58.696 123.994 90.00 114.58 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009390 0.000000 0.004295 0.00000 SCALE2 0.000000 0.017037 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008869 0.00000