data_4O5V # _entry.id 4O5V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4O5V RCSB RCSB084080 WWPDB D_1000084080 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4O6J _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4O5V _pdbx_database_status.recvd_initial_deposition_date 2013-12-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, J.Y.' 1 'Yeo, H.K.' 2 # _citation.id primary _citation.title 'Structural analysis and insight into metal-ion activation of the iron-dependent regulator from Thermoplasma acidophilum.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 70 _citation.page_first 1281 _citation.page_last 1288 _citation.year 2014 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24816097 _citation.pdbx_database_id_DOI 10.1107/S1399004714004118 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Yeo, H.K.' 1 primary 'Park, Y.W.' 2 primary 'Lee, J.Y.' 3 # _cell.entry_id 4O5V _cell.length_a 61.198 _cell.length_b 84.978 _cell.length_c 47.078 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4O5V _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Iron-dependent transcription repressor related protein' 27511.268 1 ? ? ? ? 2 non-polymer syn 'FE (II) ION' 55.845 2 ? ? ? ? 3 water nat water 18.015 111 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name IdeR # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSSHHHHHHSSGLFQGPH(MSE)NENRIRSVTEEDYLKIIQELVLYKGYATLADISRSLNVKRQSVRDEINHLIS LS(MSE)AEKIERGKYRLTPSGDREANRFLRKHRTAEILLSRCIGIPWERVDEEA(MSE)GIEHG(MSE)TEEIIQRTIE RFGVDRCPHGNPIPDPEGNVEPVADVRITSLLPDSTARISRIVYETDDILHFLALNGLIPGKDIKIESVKDTVRVLVDGR SIEIPTDIA(MSE)AI(MSE)VTVDDR ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLFQGPHMNENRIRSVTEEDYLKIIQELVLYKGYATLADISRSLNVKRQSVRDEINHLISLSMAEKIE RGKYRLTPSGDREANRFLRKHRTAEILLSRCIGIPWERVDEEAMGIEHGMTEEIIQRTIERFGVDRCPHGNPIPDPEGNV EPVADVRITSLLPDSTARISRIVYETDDILHFLALNGLIPGKDIKIESVKDTVRVLVDGRSIEIPTDIAMAIMVTVDDR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 PHE n 1 16 GLN n 1 17 GLY n 1 18 PRO n 1 19 HIS n 1 20 MSE n 1 21 ASN n 1 22 GLU n 1 23 ASN n 1 24 ARG n 1 25 ILE n 1 26 ARG n 1 27 SER n 1 28 VAL n 1 29 THR n 1 30 GLU n 1 31 GLU n 1 32 ASP n 1 33 TYR n 1 34 LEU n 1 35 LYS n 1 36 ILE n 1 37 ILE n 1 38 GLN n 1 39 GLU n 1 40 LEU n 1 41 VAL n 1 42 LEU n 1 43 TYR n 1 44 LYS n 1 45 GLY n 1 46 TYR n 1 47 ALA n 1 48 THR n 1 49 LEU n 1 50 ALA n 1 51 ASP n 1 52 ILE n 1 53 SER n 1 54 ARG n 1 55 SER n 1 56 LEU n 1 57 ASN n 1 58 VAL n 1 59 LYS n 1 60 ARG n 1 61 GLN n 1 62 SER n 1 63 VAL n 1 64 ARG n 1 65 ASP n 1 66 GLU n 1 67 ILE n 1 68 ASN n 1 69 HIS n 1 70 LEU n 1 71 ILE n 1 72 SER n 1 73 LEU n 1 74 SER n 1 75 MSE n 1 76 ALA n 1 77 GLU n 1 78 LYS n 1 79 ILE n 1 80 GLU n 1 81 ARG n 1 82 GLY n 1 83 LYS n 1 84 TYR n 1 85 ARG n 1 86 LEU n 1 87 THR n 1 88 PRO n 1 89 SER n 1 90 GLY n 1 91 ASP n 1 92 ARG n 1 93 GLU n 1 94 ALA n 1 95 ASN n 1 96 ARG n 1 97 PHE n 1 98 LEU n 1 99 ARG n 1 100 LYS n 1 101 HIS n 1 102 ARG n 1 103 THR n 1 104 ALA n 1 105 GLU n 1 106 ILE n 1 107 LEU n 1 108 LEU n 1 109 SER n 1 110 ARG n 1 111 CYS n 1 112 ILE n 1 113 GLY n 1 114 ILE n 1 115 PRO n 1 116 TRP n 1 117 GLU n 1 118 ARG n 1 119 VAL n 1 120 ASP n 1 121 GLU n 1 122 GLU n 1 123 ALA n 1 124 MSE n 1 125 GLY n 1 126 ILE n 1 127 GLU n 1 128 HIS n 1 129 GLY n 1 130 MSE n 1 131 THR n 1 132 GLU n 1 133 GLU n 1 134 ILE n 1 135 ILE n 1 136 GLN n 1 137 ARG n 1 138 THR n 1 139 ILE n 1 140 GLU n 1 141 ARG n 1 142 PHE n 1 143 GLY n 1 144 VAL n 1 145 ASP n 1 146 ARG n 1 147 CYS n 1 148 PRO n 1 149 HIS n 1 150 GLY n 1 151 ASN n 1 152 PRO n 1 153 ILE n 1 154 PRO n 1 155 ASP n 1 156 PRO n 1 157 GLU n 1 158 GLY n 1 159 ASN n 1 160 VAL n 1 161 GLU n 1 162 PRO n 1 163 VAL n 1 164 ALA n 1 165 ASP n 1 166 VAL n 1 167 ARG n 1 168 ILE n 1 169 THR n 1 170 SER n 1 171 LEU n 1 172 LEU n 1 173 PRO n 1 174 ASP n 1 175 SER n 1 176 THR n 1 177 ALA n 1 178 ARG n 1 179 ILE n 1 180 SER n 1 181 ARG n 1 182 ILE n 1 183 VAL n 1 184 TYR n 1 185 GLU n 1 186 THR n 1 187 ASP n 1 188 ASP n 1 189 ILE n 1 190 LEU n 1 191 HIS n 1 192 PHE n 1 193 LEU n 1 194 ALA n 1 195 LEU n 1 196 ASN n 1 197 GLY n 1 198 LEU n 1 199 ILE n 1 200 PRO n 1 201 GLY n 1 202 LYS n 1 203 ASP n 1 204 ILE n 1 205 LYS n 1 206 ILE n 1 207 GLU n 1 208 SER n 1 209 VAL n 1 210 LYS n 1 211 ASP n 1 212 THR n 1 213 VAL n 1 214 ARG n 1 215 VAL n 1 216 LEU n 1 217 VAL n 1 218 ASP n 1 219 GLY n 1 220 ARG n 1 221 SER n 1 222 ILE n 1 223 GLU n 1 224 ILE n 1 225 PRO n 1 226 THR n 1 227 ASP n 1 228 ILE n 1 229 ALA n 1 230 MSE n 1 231 ALA n 1 232 ILE n 1 233 MSE n 1 234 VAL n 1 235 THR n 1 236 VAL n 1 237 ASP n 1 238 ASP n 1 239 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Ta0872 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermoplasma acidophilum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 273075 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9HJU1_THEAC _struct_ref.pdbx_db_accession Q9HJU1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNENRIRSVTEEDYLKIIQELVLYKGYATLADISRSLNVKRQSVRDEINHLISLSMAEKIERGKYRLTPSGDREANRFLR KHRTAEILLSRCIGIPWERVDEEAMGIEHGMTEEIIQRTIERFGVDRCPHGNPIPDPEGNVEPVADVRITSLLPDSTARI SRIVYETDDILHFLALNGLIPGKDIKIESVKDTVRVLVDGRSIEIPTDIAMAIMVTVDDR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4O5V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 239 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9HJU1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 220 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 220 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4O5V MSE A 1 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -18 1 1 4O5V GLY A 2 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -17 2 1 4O5V SER A 3 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -16 3 1 4O5V SER A 4 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -15 4 1 4O5V HIS A 5 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -14 5 1 4O5V HIS A 6 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -13 6 1 4O5V HIS A 7 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -12 7 1 4O5V HIS A 8 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -11 8 1 4O5V HIS A 9 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -10 9 1 4O5V HIS A 10 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -9 10 1 4O5V SER A 11 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -8 11 1 4O5V SER A 12 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -7 12 1 4O5V GLY A 13 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -6 13 1 4O5V LEU A 14 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -5 14 1 4O5V PHE A 15 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -4 15 1 4O5V GLN A 16 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -3 16 1 4O5V GLY A 17 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -2 17 1 4O5V PRO A 18 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' -1 18 1 4O5V HIS A 19 ? UNP Q9HJU1 ? ? 'EXPRESSION TAG' 0 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE2 non-polymer . 'FE (II) ION' ? 'Fe 2' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4O5V _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.22 _exptl_crystal.density_percent_sol 44.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '20% PEG 4000, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 296K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-05-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PAL/PLS BEAMLINE 5C (4A)' _diffrn_source.pdbx_synchrotron_site PAL/PLS _diffrn_source.pdbx_synchrotron_beamline '5C (4A)' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 # _reflns.entry_id 4O5V _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.1 _reflns.number_obs 14925 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4O5V _refine.ls_number_reflns_obs 14888 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.166 _refine.ls_d_res_high 2.100 _refine.ls_percent_reflns_obs 99.89 _refine.ls_R_factor_obs 0.182 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.182 _refine.ls_R_factor_R_free 0.225 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.06 _refine.ls_number_reflns_R_free 754 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.22 _refine.pdbx_overall_phase_error 20.96 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1689 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 111 _refine_hist.number_atoms_total 1802 _refine_hist.d_res_high 2.100 _refine_hist.d_res_low 34.166 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 1709 ? 'X-RAY DIFFRACTION' f_angle_d 1.190 ? ? 2309 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.312 ? ? 662 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.048 ? ? 272 ? 'X-RAY DIFFRACTION' f_plane_restr 0.006 ? ? 300 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 5 2.1005 2.2626 2758 0.1797 100.00 0.2580 . . 172 . . . . 'X-RAY DIFFRACTION' 5 2.2626 2.4903 2767 0.1876 100.00 0.2834 . . 161 . . . . 'X-RAY DIFFRACTION' 5 2.4903 2.8505 2784 0.1842 100.00 0.2801 . . 140 . . . . 'X-RAY DIFFRACTION' 5 2.8505 3.5907 2860 0.1720 100.00 0.2365 . . 137 . . . . 'X-RAY DIFFRACTION' 5 3.5907 34.1702 2965 0.1485 100.00 0.1591 . . 144 . . . . # _struct.entry_id 4O5V _struct.title 'Crystal structure of T. acidophilum IdeR' _struct.pdbx_descriptor 'Iron-dependent transcription repressor related protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4O5V _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.text 'IdeR, METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 29 ? GLY A 45 ? THR A 10 GLY A 26 1 ? 17 HELX_P HELX_P2 2 THR A 48 ? ASN A 57 ? THR A 29 ASN A 38 1 ? 10 HELX_P HELX_P3 3 LYS A 59 ? LEU A 73 ? LYS A 40 LEU A 54 1 ? 15 HELX_P HELX_P4 4 THR A 87 ? GLY A 113 ? THR A 68 GLY A 94 1 ? 27 HELX_P HELX_P5 5 ARG A 118 ? ALA A 123 ? ARG A 99 ALA A 104 1 ? 6 HELX_P HELX_P6 6 MSE A 124 ? GLY A 125 ? MSE A 105 GLY A 106 5 ? 2 HELX_P HELX_P7 7 ILE A 126 ? MSE A 130 ? ILE A 107 MSE A 111 5 ? 5 HELX_P HELX_P8 8 THR A 131 ? GLY A 143 ? THR A 112 GLY A 124 1 ? 13 HELX_P HELX_P9 9 THR A 169 ? LEU A 171 ? THR A 150 LEU A 152 5 ? 3 HELX_P HELX_P10 10 THR A 186 ? ASN A 196 ? THR A 167 ASN A 177 1 ? 11 HELX_P HELX_P11 11 THR A 226 ? MSE A 230 ? THR A 207 MSE A 211 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 111 SG ? ? ? 1_555 A CYS 111 SG ? ? A CYS 92 A CYS 92 2_665 ? ? ? ? ? ? ? 2.376 ? covale1 covale ? ? A SER 74 C ? ? ? 1_555 A MSE 75 N ? ? A SER 55 A MSE 56 1_555 ? ? ? ? ? ? ? 1.325 ? covale2 covale ? ? A MSE 75 C ? ? ? 1_555 A ALA 76 N ? ? A MSE 56 A ALA 57 1_555 ? ? ? ? ? ? ? 1.318 ? covale3 covale ? ? A ALA 123 C ? ? ? 1_555 A MSE 124 N ? ? A ALA 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.310 ? covale4 covale ? ? A MSE 124 C ? ? ? 1_555 A GLY 125 N ? ? A MSE 105 A GLY 106 1_555 ? ? ? ? ? ? ? 1.305 ? covale5 covale ? ? A GLY 129 C ? ? ? 1_555 A MSE 130 N ? ? A GLY 110 A MSE 111 1_555 ? ? ? ? ? ? ? 1.323 ? covale6 covale ? ? A MSE 130 C ? ? ? 1_555 A THR 131 N ? ? A MSE 111 A THR 112 1_555 ? ? ? ? ? ? ? 1.305 ? covale7 covale ? ? A ALA 229 C ? ? ? 1_555 A MSE 230 N ? ? A ALA 210 A MSE 211 1_555 ? ? ? ? ? ? ? 1.316 ? covale8 covale ? ? A MSE 230 C ? ? ? 1_555 A ALA 231 N ? ? A MSE 211 A ALA 212 1_555 ? ? ? ? ? ? ? 1.315 ? covale9 covale ? ? A ILE 232 C ? ? ? 1_555 A MSE 233 N ? ? A ILE 213 A MSE 214 1_555 ? ? ? ? ? ? ? 1.309 ? covale10 covale ? ? A MSE 233 C ? ? ? 1_555 A VAL 234 N ? ? A MSE 214 A VAL 215 1_555 ? ? ? ? ? ? ? 1.309 ? metalc1 metalc ? ? A GLU 105 OE2 ? ? ? 1_555 C FE2 . FE ? ? A GLU 86 A FE2 302 1_555 ? ? ? ? ? ? ? 2.208 ? metalc2 metalc ? ? A HIS 101 NE2 ? ? ? 1_555 C FE2 . FE ? ? A HIS 82 A FE2 302 1_555 ? ? ? ? ? ? ? 2.219 ? metalc3 metalc ? ? A ASP 120 OD1 ? ? ? 1_555 C FE2 . FE ? ? A ASP 101 A FE2 302 1_555 ? ? ? ? ? ? ? 2.230 ? metalc4 metalc ? ? C FE2 . FE ? ? ? 1_555 D HOH . O ? ? A FE2 302 A HOH 405 1_555 ? ? ? ? ? ? ? 2.296 ? metalc5 metalc ? ? A GLU 105 OE1 ? ? ? 1_555 B FE2 . FE ? ? A GLU 86 A FE2 301 1_555 ? ? ? ? ? ? ? 2.324 ? metalc6 metalc ? ? A GLU 185 OE1 ? ? ? 1_555 C FE2 . FE ? ? A GLU 166 A FE2 302 1_555 ? ? ? ? ? ? ? 2.376 ? metalc7 metalc ? ? A HIS 149 ND1 ? ? ? 1_555 B FE2 . FE ? ? A HIS 130 A FE2 301 1_555 ? ? ? ? ? ? ? 2.382 ? metalc8 metalc ? ? B FE2 . FE ? ? ? 1_555 D HOH . O ? ? A FE2 301 A HOH 405 1_555 ? ? ? ? ? ? ? 2.402 ? metalc9 metalc ? ? A CYS 147 SG ? ? ? 1_555 B FE2 . FE ? ? A CYS 128 A FE2 301 1_555 ? ? ? ? ? ? ? 2.431 ? metalc10 metalc ? ? C FE2 . FE ? ? ? 1_555 D HOH . O ? ? A FE2 302 A HOH 401 1_555 ? ? ? ? ? ? ? 2.482 ? metalc11 metalc ? ? A GLU 185 OE2 ? ? ? 1_555 B FE2 . FE ? ? A GLU 166 A FE2 301 1_555 ? ? ? ? ? ? ? 2.502 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 76 ? GLU A 80 ? ALA A 57 GLU A 61 A 2 LYS A 83 ? LEU A 86 ? LYS A 64 LEU A 67 B 1 VAL A 166 ? ARG A 167 ? VAL A 147 ARG A 148 B 2 ILE A 232 ? VAL A 236 ? ILE A 213 VAL A 217 B 3 THR A 176 ? ILE A 182 ? THR A 157 ILE A 163 B 4 ASP A 203 ? SER A 208 ? ASP A 184 SER A 189 B 5 THR A 212 ? VAL A 217 ? THR A 193 VAL A 198 B 6 ARG A 220 ? PRO A 225 ? ARG A 201 PRO A 206 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 79 ? N ILE A 60 O LYS A 83 ? O LYS A 64 B 1 2 N VAL A 166 ? N VAL A 147 O VAL A 234 ? O VAL A 215 B 2 3 O THR A 235 ? O THR A 216 N ARG A 178 ? N ARG A 159 B 3 4 N ALA A 177 ? N ALA A 158 O ILE A 204 ? O ILE A 185 B 4 5 N GLU A 207 ? N GLU A 188 O ARG A 214 ? O ARG A 195 B 5 6 N VAL A 217 ? N VAL A 198 O ARG A 220 ? O ARG A 201 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE FE2 A 301' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE FE2 A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 105 ? GLU A 86 . ? 1_555 ? 2 AC1 6 CYS A 147 ? CYS A 128 . ? 1_555 ? 3 AC1 6 HIS A 149 ? HIS A 130 . ? 1_555 ? 4 AC1 6 GLU A 185 ? GLU A 166 . ? 1_555 ? 5 AC1 6 FE2 C . ? FE2 A 302 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 405 . ? 1_555 ? 7 AC2 7 HIS A 101 ? HIS A 82 . ? 1_555 ? 8 AC2 7 GLU A 105 ? GLU A 86 . ? 1_555 ? 9 AC2 7 ASP A 120 ? ASP A 101 . ? 1_555 ? 10 AC2 7 GLU A 185 ? GLU A 166 . ? 1_555 ? 11 AC2 7 FE2 B . ? FE2 A 301 . ? 1_555 ? 12 AC2 7 HOH D . ? HOH A 401 . ? 1_555 ? 13 AC2 7 HOH D . ? HOH A 405 . ? 1_555 ? # _database_PDB_matrix.entry_id 4O5V _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4O5V _atom_sites.fract_transf_matrix[1][1] 0.016340 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011768 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021241 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 SER 4 -15 ? ? ? A . n A 1 5 HIS 5 -14 ? ? ? A . n A 1 6 HIS 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 HIS 10 -9 ? ? ? A . n A 1 11 SER 11 -8 ? ? ? A . n A 1 12 SER 12 -7 ? ? ? A . n A 1 13 GLY 13 -6 ? ? ? A . n A 1 14 LEU 14 -5 ? ? ? A . n A 1 15 PHE 15 -4 ? ? ? A . n A 1 16 GLN 16 -3 ? ? ? A . n A 1 17 GLY 17 -2 ? ? ? A . n A 1 18 PRO 18 -1 ? ? ? A . n A 1 19 HIS 19 0 ? ? ? A . n A 1 20 MSE 20 1 ? ? ? A . n A 1 21 ASN 21 2 ? ? ? A . n A 1 22 GLU 22 3 ? ? ? A . n A 1 23 ASN 23 4 ? ? ? A . n A 1 24 ARG 24 5 ? ? ? A . n A 1 25 ILE 25 6 6 ILE ALA A . n A 1 26 ARG 26 7 7 ARG ARG A . n A 1 27 SER 27 8 8 SER SER A . n A 1 28 VAL 28 9 9 VAL VAL A . n A 1 29 THR 29 10 10 THR THR A . n A 1 30 GLU 30 11 11 GLU GLU A . n A 1 31 GLU 31 12 12 GLU GLU A . n A 1 32 ASP 32 13 13 ASP ASP A . n A 1 33 TYR 33 14 14 TYR TYR A . n A 1 34 LEU 34 15 15 LEU LEU A . n A 1 35 LYS 35 16 16 LYS LYS A . n A 1 36 ILE 36 17 17 ILE ILE A . n A 1 37 ILE 37 18 18 ILE ILE A . n A 1 38 GLN 38 19 19 GLN GLN A . n A 1 39 GLU 39 20 20 GLU GLU A . n A 1 40 LEU 40 21 21 LEU LEU A . n A 1 41 VAL 41 22 22 VAL VAL A . n A 1 42 LEU 42 23 23 LEU LEU A . n A 1 43 TYR 43 24 24 TYR TYR A . n A 1 44 LYS 44 25 25 LYS LYS A . n A 1 45 GLY 45 26 26 GLY GLY A . n A 1 46 TYR 46 27 27 TYR TYR A . n A 1 47 ALA 47 28 28 ALA ALA A . n A 1 48 THR 48 29 29 THR THR A . n A 1 49 LEU 49 30 30 LEU LEU A . n A 1 50 ALA 50 31 31 ALA ALA A . n A 1 51 ASP 51 32 32 ASP ASP A . n A 1 52 ILE 52 33 33 ILE ILE A . n A 1 53 SER 53 34 34 SER SER A . n A 1 54 ARG 54 35 35 ARG ARG A . n A 1 55 SER 55 36 36 SER SER A . n A 1 56 LEU 56 37 37 LEU LEU A . n A 1 57 ASN 57 38 38 ASN ASN A . n A 1 58 VAL 58 39 39 VAL VAL A . n A 1 59 LYS 59 40 40 LYS LYS A . n A 1 60 ARG 60 41 41 ARG ARG A . n A 1 61 GLN 61 42 42 GLN GLN A . n A 1 62 SER 62 43 43 SER SER A . n A 1 63 VAL 63 44 44 VAL VAL A . n A 1 64 ARG 64 45 45 ARG ARG A . n A 1 65 ASP 65 46 46 ASP ASP A . n A 1 66 GLU 66 47 47 GLU GLU A . n A 1 67 ILE 67 48 48 ILE ILE A . n A 1 68 ASN 68 49 49 ASN ASN A . n A 1 69 HIS 69 50 50 HIS HIS A . n A 1 70 LEU 70 51 51 LEU LEU A . n A 1 71 ILE 71 52 52 ILE ILE A . n A 1 72 SER 72 53 53 SER SER A . n A 1 73 LEU 73 54 54 LEU LEU A . n A 1 74 SER 74 55 55 SER SER A . n A 1 75 MSE 75 56 56 MSE MSE A . n A 1 76 ALA 76 57 57 ALA ALA A . n A 1 77 GLU 77 58 58 GLU GLU A . n A 1 78 LYS 78 59 59 LYS LYS A . n A 1 79 ILE 79 60 60 ILE ILE A . n A 1 80 GLU 80 61 61 GLU GLU A . n A 1 81 ARG 81 62 62 ARG ARG A . n A 1 82 GLY 82 63 63 GLY GLY A . n A 1 83 LYS 83 64 64 LYS LYS A . n A 1 84 TYR 84 65 65 TYR TYR A . n A 1 85 ARG 85 66 66 ARG ARG A . n A 1 86 LEU 86 67 67 LEU LEU A . n A 1 87 THR 87 68 68 THR THR A . n A 1 88 PRO 88 69 69 PRO PRO A . n A 1 89 SER 89 70 70 SER SER A . n A 1 90 GLY 90 71 71 GLY GLY A . n A 1 91 ASP 91 72 72 ASP ASP A . n A 1 92 ARG 92 73 73 ARG ARG A . n A 1 93 GLU 93 74 74 GLU GLU A . n A 1 94 ALA 94 75 75 ALA ALA A . n A 1 95 ASN 95 76 76 ASN ASN A . n A 1 96 ARG 96 77 77 ARG ARG A . n A 1 97 PHE 97 78 78 PHE PHE A . n A 1 98 LEU 98 79 79 LEU LEU A . n A 1 99 ARG 99 80 80 ARG ARG A . n A 1 100 LYS 100 81 81 LYS LYS A . n A 1 101 HIS 101 82 82 HIS HIS A . n A 1 102 ARG 102 83 83 ARG ARG A . n A 1 103 THR 103 84 84 THR THR A . n A 1 104 ALA 104 85 85 ALA ALA A . n A 1 105 GLU 105 86 86 GLU GLU A . n A 1 106 ILE 106 87 87 ILE ILE A . n A 1 107 LEU 107 88 88 LEU LEU A . n A 1 108 LEU 108 89 89 LEU LEU A . n A 1 109 SER 109 90 90 SER SER A . n A 1 110 ARG 110 91 91 ARG ARG A . n A 1 111 CYS 111 92 92 CYS CYS A . n A 1 112 ILE 112 93 93 ILE ILE A . n A 1 113 GLY 113 94 94 GLY GLY A . n A 1 114 ILE 114 95 95 ILE ILE A . n A 1 115 PRO 115 96 96 PRO PRO A . n A 1 116 TRP 116 97 97 TRP TRP A . n A 1 117 GLU 117 98 98 GLU GLU A . n A 1 118 ARG 118 99 99 ARG ARG A . n A 1 119 VAL 119 100 100 VAL VAL A . n A 1 120 ASP 120 101 101 ASP ASP A . n A 1 121 GLU 121 102 102 GLU GLU A . n A 1 122 GLU 122 103 103 GLU GLU A . n A 1 123 ALA 123 104 104 ALA ALA A . n A 1 124 MSE 124 105 105 MSE MSE A . n A 1 125 GLY 125 106 106 GLY GLY A . n A 1 126 ILE 126 107 107 ILE ILE A . n A 1 127 GLU 127 108 108 GLU GLU A . n A 1 128 HIS 128 109 109 HIS HIS A . n A 1 129 GLY 129 110 110 GLY GLY A . n A 1 130 MSE 130 111 111 MSE MSE A . n A 1 131 THR 131 112 112 THR THR A . n A 1 132 GLU 132 113 113 GLU GLU A . n A 1 133 GLU 133 114 114 GLU GLU A . n A 1 134 ILE 134 115 115 ILE ILE A . n A 1 135 ILE 135 116 116 ILE ILE A . n A 1 136 GLN 136 117 117 GLN GLN A . n A 1 137 ARG 137 118 118 ARG ARG A . n A 1 138 THR 138 119 119 THR THR A . n A 1 139 ILE 139 120 120 ILE ILE A . n A 1 140 GLU 140 121 121 GLU GLU A . n A 1 141 ARG 141 122 122 ARG ARG A . n A 1 142 PHE 142 123 123 PHE PHE A . n A 1 143 GLY 143 124 124 GLY GLY A . n A 1 144 VAL 144 125 125 VAL VAL A . n A 1 145 ASP 145 126 126 ASP ASP A . n A 1 146 ARG 146 127 127 ARG ARG A . n A 1 147 CYS 147 128 128 CYS CYS A . n A 1 148 PRO 148 129 129 PRO PRO A . n A 1 149 HIS 149 130 130 HIS HIS A . n A 1 150 GLY 150 131 131 GLY GLY A . n A 1 151 ASN 151 132 132 ASN ASN A . n A 1 152 PRO 152 133 133 PRO PRO A . n A 1 153 ILE 153 134 134 ILE ILE A . n A 1 154 PRO 154 135 135 PRO PRO A . n A 1 155 ASP 155 136 136 ASP ASP A . n A 1 156 PRO 156 137 137 PRO PRO A . n A 1 157 GLU 157 138 138 GLU GLU A . n A 1 158 GLY 158 139 139 GLY GLY A . n A 1 159 ASN 159 140 140 ASN ASN A . n A 1 160 VAL 160 141 141 VAL VAL A . n A 1 161 GLU 161 142 142 GLU GLU A . n A 1 162 PRO 162 143 143 PRO PRO A . n A 1 163 VAL 163 144 144 VAL VAL A . n A 1 164 ALA 164 145 145 ALA ALA A . n A 1 165 ASP 165 146 146 ASP ASP A . n A 1 166 VAL 166 147 147 VAL VAL A . n A 1 167 ARG 167 148 148 ARG ARG A . n A 1 168 ILE 168 149 149 ILE ILE A . n A 1 169 THR 169 150 150 THR THR A . n A 1 170 SER 170 151 151 SER SER A . n A 1 171 LEU 171 152 152 LEU LEU A . n A 1 172 LEU 172 153 153 LEU LEU A . n A 1 173 PRO 173 154 154 PRO PRO A . n A 1 174 ASP 174 155 155 ASP ASP A . n A 1 175 SER 175 156 156 SER SER A . n A 1 176 THR 176 157 157 THR THR A . n A 1 177 ALA 177 158 158 ALA ALA A . n A 1 178 ARG 178 159 159 ARG ARG A . n A 1 179 ILE 179 160 160 ILE ILE A . n A 1 180 SER 180 161 161 SER SER A . n A 1 181 ARG 181 162 162 ARG ARG A . n A 1 182 ILE 182 163 163 ILE ILE A . n A 1 183 VAL 183 164 164 VAL VAL A . n A 1 184 TYR 184 165 165 TYR TYR A . n A 1 185 GLU 185 166 166 GLU GLU A . n A 1 186 THR 186 167 167 THR THR A . n A 1 187 ASP 187 168 168 ASP ASP A . n A 1 188 ASP 188 169 169 ASP ASP A . n A 1 189 ILE 189 170 170 ILE ILE A . n A 1 190 LEU 190 171 171 LEU LEU A . n A 1 191 HIS 191 172 172 HIS HIS A . n A 1 192 PHE 192 173 173 PHE PHE A . n A 1 193 LEU 193 174 174 LEU LEU A . n A 1 194 ALA 194 175 175 ALA ALA A . n A 1 195 LEU 195 176 176 LEU LEU A . n A 1 196 ASN 196 177 177 ASN ASN A . n A 1 197 GLY 197 178 178 GLY GLY A . n A 1 198 LEU 198 179 179 LEU LEU A . n A 1 199 ILE 199 180 180 ILE ILE A . n A 1 200 PRO 200 181 181 PRO PRO A . n A 1 201 GLY 201 182 182 GLY GLY A . n A 1 202 LYS 202 183 183 LYS LYS A . n A 1 203 ASP 203 184 184 ASP ASP A . n A 1 204 ILE 204 185 185 ILE ILE A . n A 1 205 LYS 205 186 186 LYS LYS A . n A 1 206 ILE 206 187 187 ILE ILE A . n A 1 207 GLU 207 188 188 GLU GLU A . n A 1 208 SER 208 189 189 SER SER A . n A 1 209 VAL 209 190 190 VAL VAL A . n A 1 210 LYS 210 191 191 LYS LYS A . n A 1 211 ASP 211 192 192 ASP ASP A . n A 1 212 THR 212 193 193 THR THR A . n A 1 213 VAL 213 194 194 VAL VAL A . n A 1 214 ARG 214 195 195 ARG ARG A . n A 1 215 VAL 215 196 196 VAL VAL A . n A 1 216 LEU 216 197 197 LEU LEU A . n A 1 217 VAL 217 198 198 VAL VAL A . n A 1 218 ASP 218 199 199 ASP ASP A . n A 1 219 GLY 219 200 200 GLY GLY A . n A 1 220 ARG 220 201 201 ARG ARG A . n A 1 221 SER 221 202 202 SER SER A . n A 1 222 ILE 222 203 203 ILE ILE A . n A 1 223 GLU 223 204 204 GLU GLU A . n A 1 224 ILE 224 205 205 ILE ILE A . n A 1 225 PRO 225 206 206 PRO PRO A . n A 1 226 THR 226 207 207 THR THR A . n A 1 227 ASP 227 208 208 ASP ASP A . n A 1 228 ILE 228 209 209 ILE ILE A . n A 1 229 ALA 229 210 210 ALA ALA A . n A 1 230 MSE 230 211 211 MSE MSE A . n A 1 231 ALA 231 212 212 ALA ALA A . n A 1 232 ILE 232 213 213 ILE ILE A . n A 1 233 MSE 233 214 214 MSE MSE A . n A 1 234 VAL 234 215 215 VAL VAL A . n A 1 235 THR 235 216 216 THR THR A . n A 1 236 VAL 236 217 217 VAL VAL A . n A 1 237 ASP 237 218 218 ASP ASP A . n A 1 238 ASP 238 219 ? ? ? A . n A 1 239 ARG 239 220 ? ? ? A . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 75 A MSE 56 ? MET SELENOMETHIONINE 2 A MSE 124 A MSE 105 ? MET SELENOMETHIONINE 3 A MSE 130 A MSE 111 ? MET SELENOMETHIONINE 4 A MSE 230 A MSE 211 ? MET SELENOMETHIONINE 5 A MSE 233 A MSE 214 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2130 ? 1 MORE -72 ? 1 'SSA (A^2)' 20000 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 61.1980000000 0.0000000000 -1.0000000000 0.0000000000 84.9780000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 105 ? A GLU 86 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 NE2 ? A HIS 101 ? A HIS 82 ? 1_555 89.5 ? 2 OE2 ? A GLU 105 ? A GLU 86 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 OD1 ? A ASP 120 ? A ASP 101 ? 1_555 93.0 ? 3 NE2 ? A HIS 101 ? A HIS 82 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 OD1 ? A ASP 120 ? A ASP 101 ? 1_555 82.9 ? 4 OE2 ? A GLU 105 ? A GLU 86 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 93.8 ? 5 NE2 ? A HIS 101 ? A HIS 82 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 85.4 ? 6 OD1 ? A ASP 120 ? A ASP 101 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 166.4 ? 7 OE2 ? A GLU 105 ? A GLU 86 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 OE1 ? A GLU 185 ? A GLU 166 ? 1_555 96.2 ? 8 NE2 ? A HIS 101 ? A HIS 82 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 OE1 ? A GLU 185 ? A GLU 166 ? 1_555 169.6 ? 9 OD1 ? A ASP 120 ? A ASP 101 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 OE1 ? A GLU 185 ? A GLU 166 ? 1_555 88.1 ? 10 O ? D HOH . ? A HOH 405 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 OE1 ? A GLU 185 ? A GLU 166 ? 1_555 102.8 ? 11 OE2 ? A GLU 105 ? A GLU 86 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 O ? D HOH . ? A HOH 401 ? 1_555 172.4 ? 12 NE2 ? A HIS 101 ? A HIS 82 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 O ? D HOH . ? A HOH 401 ? 1_555 95.5 ? 13 OD1 ? A ASP 120 ? A ASP 101 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 O ? D HOH . ? A HOH 401 ? 1_555 93.3 ? 14 O ? D HOH . ? A HOH 405 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 O ? D HOH . ? A HOH 401 ? 1_555 81.0 ? 15 OE1 ? A GLU 185 ? A GLU 166 ? 1_555 FE ? C FE2 . ? A FE2 302 ? 1_555 O ? D HOH . ? A HOH 401 ? 1_555 79.8 ? 16 OE1 ? A GLU 105 ? A GLU 86 ? 1_555 FE ? B FE2 . ? A FE2 301 ? 1_555 ND1 ? A HIS 149 ? A HIS 130 ? 1_555 92.9 ? 17 OE1 ? A GLU 105 ? A GLU 86 ? 1_555 FE ? B FE2 . ? A FE2 301 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 77.6 ? 18 ND1 ? A HIS 149 ? A HIS 130 ? 1_555 FE ? B FE2 . ? A FE2 301 ? 1_555 O ? D HOH . ? A HOH 405 ? 1_555 152.3 ? 19 OE1 ? A GLU 105 ? A GLU 86 ? 1_555 FE ? B FE2 . ? A FE2 301 ? 1_555 SG ? A CYS 147 ? A CYS 128 ? 1_555 101.3 ? 20 ND1 ? A HIS 149 ? A HIS 130 ? 1_555 FE ? B FE2 . ? A FE2 301 ? 1_555 SG ? A CYS 147 ? A CYS 128 ? 1_555 113.8 ? 21 O ? D HOH . ? A HOH 405 ? 1_555 FE ? B FE2 . ? A FE2 301 ? 1_555 SG ? A CYS 147 ? A CYS 128 ? 1_555 93.7 ? 22 OE1 ? A GLU 105 ? A GLU 86 ? 1_555 FE ? B FE2 . ? A FE2 301 ? 1_555 OE2 ? A GLU 185 ? A GLU 166 ? 1_555 149.4 ? 23 ND1 ? A HIS 149 ? A HIS 130 ? 1_555 FE ? B FE2 . ? A FE2 301 ? 1_555 OE2 ? A GLU 185 ? A GLU 166 ? 1_555 87.2 ? 24 O ? D HOH . ? A HOH 405 ? 1_555 FE ? B FE2 . ? A FE2 301 ? 1_555 OE2 ? A GLU 185 ? A GLU 166 ? 1_555 88.2 ? 25 SG ? A CYS 147 ? A CYS 128 ? 1_555 FE ? B FE2 . ? A FE2 301 ? 1_555 OE2 ? A GLU 185 ? A GLU 166 ? 1_555 106.6 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2014-11-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 35.5995 _pdbx_refine_tls.origin_y 23.5046 _pdbx_refine_tls.origin_z 16.2474 _pdbx_refine_tls.T[1][1] 0.1441 _pdbx_refine_tls.T[2][2] 0.1190 _pdbx_refine_tls.T[3][3] 0.1646 _pdbx_refine_tls.T[1][2] -0.0181 _pdbx_refine_tls.T[1][3] -0.0013 _pdbx_refine_tls.T[2][3] 0.0130 _pdbx_refine_tls.L[1][1] 1.3820 _pdbx_refine_tls.L[2][2] 0.6614 _pdbx_refine_tls.L[3][3] 1.5851 _pdbx_refine_tls.L[1][2] -0.4783 _pdbx_refine_tls.L[1][3] 0.3069 _pdbx_refine_tls.L[2][3] 0.0961 _pdbx_refine_tls.S[1][1] -0.0202 _pdbx_refine_tls.S[1][2] -0.0352 _pdbx_refine_tls.S[1][3] -0.0496 _pdbx_refine_tls.S[2][1] -0.0364 _pdbx_refine_tls.S[2][2] -0.0025 _pdbx_refine_tls.S[2][3] 0.0268 _pdbx_refine_tls.S[3][1] 0.0325 _pdbx_refine_tls.S[3][2] 0.1206 _pdbx_refine_tls.S[3][3] 0.0002 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details '(CHAIN A AND RESSEQ 6:218)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 SOLVE phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.4_1496)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 401 ? ? O A HOH 444 ? ? 1.96 2 1 O A HOH 401 ? ? O A HOH 460 ? ? 2.18 3 1 O A HOH 487 ? ? O A HOH 506 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 155 ? ? 81.56 -5.14 2 1 SER A 161 ? ? -98.33 -62.88 3 1 GLU A 166 ? ? -110.69 72.10 4 1 ASP A 192 ? ? 76.11 -57.45 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 6 ? CG1 ? A ILE 25 CG1 2 1 Y 1 A ILE 6 ? CG2 ? A ILE 25 CG2 3 1 Y 1 A ILE 6 ? CD1 ? A ILE 25 CD1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -18 ? A MSE 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A SER -15 ? A SER 4 5 1 Y 1 A HIS -14 ? A HIS 5 6 1 Y 1 A HIS -13 ? A HIS 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A HIS -9 ? A HIS 10 11 1 Y 1 A SER -8 ? A SER 11 12 1 Y 1 A SER -7 ? A SER 12 13 1 Y 1 A GLY -6 ? A GLY 13 14 1 Y 1 A LEU -5 ? A LEU 14 15 1 Y 1 A PHE -4 ? A PHE 15 16 1 Y 1 A GLN -3 ? A GLN 16 17 1 Y 1 A GLY -2 ? A GLY 17 18 1 Y 1 A PRO -1 ? A PRO 18 19 1 Y 1 A HIS 0 ? A HIS 19 20 1 Y 1 A MSE 1 ? A MSE 20 21 1 Y 1 A ASN 2 ? A ASN 21 22 1 Y 1 A GLU 3 ? A GLU 22 23 1 Y 1 A ASN 4 ? A ASN 23 24 1 Y 1 A ARG 5 ? A ARG 24 25 1 Y 1 A ASP 219 ? A ASP 238 26 1 Y 1 A ARG 220 ? A ARG 239 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FE (II) ION' FE2 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE2 1 301 1 FE2 FE A . C 2 FE2 1 302 2 FE2 FE A . D 3 HOH 1 401 1 HOH HOH A . D 3 HOH 2 402 2 HOH HOH A . D 3 HOH 3 403 3 HOH HOH A . D 3 HOH 4 404 4 HOH HOH A . D 3 HOH 5 405 5 HOH HOH A . D 3 HOH 6 406 6 HOH HOH A . D 3 HOH 7 407 7 HOH HOH A . D 3 HOH 8 408 8 HOH HOH A . D 3 HOH 9 409 9 HOH HOH A . D 3 HOH 10 410 10 HOH HOH A . D 3 HOH 11 411 11 HOH HOH A . D 3 HOH 12 412 12 HOH HOH A . D 3 HOH 13 413 13 HOH HOH A . D 3 HOH 14 414 14 HOH HOH A . D 3 HOH 15 415 15 HOH HOH A . D 3 HOH 16 416 16 HOH HOH A . D 3 HOH 17 417 17 HOH HOH A . D 3 HOH 18 418 18 HOH HOH A . D 3 HOH 19 419 19 HOH HOH A . D 3 HOH 20 420 20 HOH HOH A . D 3 HOH 21 421 21 HOH HOH A . D 3 HOH 22 422 22 HOH HOH A . D 3 HOH 23 423 23 HOH HOH A . D 3 HOH 24 424 24 HOH HOH A . D 3 HOH 25 425 25 HOH HOH A . D 3 HOH 26 426 26 HOH HOH A . D 3 HOH 27 427 27 HOH HOH A . D 3 HOH 28 428 28 HOH HOH A . D 3 HOH 29 429 29 HOH HOH A . D 3 HOH 30 430 30 HOH HOH A . D 3 HOH 31 431 31 HOH HOH A . D 3 HOH 32 432 32 HOH HOH A . D 3 HOH 33 433 33 HOH HOH A . D 3 HOH 34 434 34 HOH HOH A . D 3 HOH 35 435 35 HOH HOH A . D 3 HOH 36 436 36 HOH HOH A . D 3 HOH 37 437 37 HOH HOH A . D 3 HOH 38 438 38 HOH HOH A . D 3 HOH 39 439 39 HOH HOH A . D 3 HOH 40 440 40 HOH HOH A . D 3 HOH 41 441 41 HOH HOH A . D 3 HOH 42 442 42 HOH HOH A . D 3 HOH 43 443 43 HOH HOH A . D 3 HOH 44 444 44 HOH HOH A . D 3 HOH 45 445 45 HOH HOH A . D 3 HOH 46 446 46 HOH HOH A . D 3 HOH 47 447 47 HOH HOH A . D 3 HOH 48 448 48 HOH HOH A . D 3 HOH 49 449 49 HOH HOH A . D 3 HOH 50 450 50 HOH HOH A . D 3 HOH 51 451 51 HOH HOH A . D 3 HOH 52 452 52 HOH HOH A . D 3 HOH 53 453 53 HOH HOH A . D 3 HOH 54 454 54 HOH HOH A . D 3 HOH 55 455 55 HOH HOH A . D 3 HOH 56 456 56 HOH HOH A . D 3 HOH 57 457 57 HOH HOH A . D 3 HOH 58 458 58 HOH HOH A . D 3 HOH 59 459 59 HOH HOH A . D 3 HOH 60 460 60 HOH HOH A . D 3 HOH 61 461 61 HOH HOH A . D 3 HOH 62 462 62 HOH HOH A . D 3 HOH 63 463 63 HOH HOH A . D 3 HOH 64 464 64 HOH HOH A . D 3 HOH 65 465 65 HOH HOH A . D 3 HOH 66 466 66 HOH HOH A . D 3 HOH 67 467 67 HOH HOH A . D 3 HOH 68 468 68 HOH HOH A . D 3 HOH 69 469 69 HOH HOH A . D 3 HOH 70 470 70 HOH HOH A . D 3 HOH 71 471 71 HOH HOH A . D 3 HOH 72 472 72 HOH HOH A . D 3 HOH 73 473 73 HOH HOH A . D 3 HOH 74 474 74 HOH HOH A . D 3 HOH 75 475 75 HOH HOH A . D 3 HOH 76 476 76 HOH HOH A . D 3 HOH 77 477 77 HOH HOH A . D 3 HOH 78 478 78 HOH HOH A . D 3 HOH 79 479 79 HOH HOH A . D 3 HOH 80 480 80 HOH HOH A . D 3 HOH 81 481 81 HOH HOH A . D 3 HOH 82 482 82 HOH HOH A . D 3 HOH 83 483 83 HOH HOH A . D 3 HOH 84 484 84 HOH HOH A . D 3 HOH 85 485 85 HOH HOH A . D 3 HOH 86 486 86 HOH HOH A . D 3 HOH 87 487 87 HOH HOH A . D 3 HOH 88 488 88 HOH HOH A . D 3 HOH 89 489 89 HOH HOH A . D 3 HOH 90 490 90 HOH HOH A . D 3 HOH 91 491 91 HOH HOH A . D 3 HOH 92 492 92 HOH HOH A . D 3 HOH 93 493 93 HOH HOH A . D 3 HOH 94 494 94 HOH HOH A . D 3 HOH 95 495 95 HOH HOH A . D 3 HOH 96 496 96 HOH HOH A . D 3 HOH 97 497 97 HOH HOH A . D 3 HOH 98 498 98 HOH HOH A . D 3 HOH 99 499 99 HOH HOH A . D 3 HOH 100 500 100 HOH HOH A . D 3 HOH 101 501 101 HOH HOH A . D 3 HOH 102 502 102 HOH HOH A . D 3 HOH 103 503 103 HOH HOH A . D 3 HOH 104 504 104 HOH HOH A . D 3 HOH 105 505 105 HOH HOH A . D 3 HOH 106 506 106 HOH HOH A . D 3 HOH 107 507 107 HOH HOH A . D 3 HOH 108 508 108 HOH HOH A . D 3 HOH 109 509 109 HOH HOH A . D 3 HOH 110 510 110 HOH HOH A . D 3 HOH 111 511 111 HOH HOH A . #