HEADER TRANSFERASE 26-DEC-13 4O7O TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS MALTOSE KINASE MAK COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALTOKINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MAK, MALTOSE-1-PHOSPHATE SYNTHASE; COMPND 5 EC: 2.7.1.175; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: MAK, RV0127; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS MALTOSE KINASE, KINASE, ATP BINDING, MALTOSE BINDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.LI,X.T.GUAN,Z.H.RAO REVDAT 3 28-FEB-24 4O7O 1 REMARK REVDAT 2 22-NOV-17 4O7O 1 REMARK REVDAT 1 22-OCT-14 4O7O 0 JRNL AUTH J.LI,X.GUAN,N.SHAW,W.CHEN,Y.DONG,X.XU,X.LI,Z.RAO JRNL TITL HOMOTYPIC DIMERIZATION OF A MALTOSE KINASE FOR MOLECULAR JRNL TITL 2 SCAFFOLDING. JRNL REF SCI REP V. 4 6418 2014 JRNL REFN ESSN 2045-2322 JRNL PMID 25245657 JRNL DOI 10.1038/SREP06418 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7_650 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 50237 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2543 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3129 - 6.2825 1.00 3031 161 0.1929 0.1979 REMARK 3 2 6.2825 - 4.9901 1.00 2791 164 0.2124 0.2265 REMARK 3 3 4.9901 - 4.3603 1.00 2766 148 0.1661 0.1777 REMARK 3 4 4.3603 - 3.9621 1.00 2749 134 0.1840 0.2648 REMARK 3 5 3.9621 - 3.6784 1.00 2723 130 0.1986 0.2115 REMARK 3 6 3.6784 - 3.4617 1.00 2658 151 0.2005 0.2382 REMARK 3 7 3.4617 - 3.2884 1.00 2716 126 0.2135 0.2531 REMARK 3 8 3.2884 - 3.1453 1.00 2679 137 0.2181 0.2714 REMARK 3 9 3.1453 - 3.0243 1.00 2625 150 0.2236 0.2808 REMARK 3 10 3.0243 - 2.9200 0.99 2631 158 0.2279 0.3052 REMARK 3 11 2.9200 - 2.8287 0.99 2631 133 0.2298 0.2824 REMARK 3 12 2.8287 - 2.7479 0.99 2625 137 0.2407 0.2995 REMARK 3 13 2.7479 - 2.6755 0.98 2596 137 0.2467 0.3493 REMARK 3 14 2.6755 - 2.6103 0.97 2527 136 0.2580 0.3481 REMARK 3 15 2.6103 - 2.5509 0.96 2557 134 0.2353 0.2852 REMARK 3 16 2.5509 - 2.4967 0.95 2517 136 0.2476 0.3038 REMARK 3 17 2.4967 - 2.4467 0.94 2465 131 0.2645 0.3248 REMARK 3 18 2.4467 - 2.4006 0.92 2407 140 0.2648 0.3500 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 47.41 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.88170 REMARK 3 B22 (A**2) : 2.88170 REMARK 3 B33 (A**2) : -5.76350 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 7330 REMARK 3 ANGLE : 1.249 9534 REMARK 3 CHIRALITY : 0.084 1069 REMARK 3 PLANARITY : 0.006 1257 REMARK 3 DIHEDRAL : 16.480 2517 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 6:124) REMARK 3 ORIGIN FOR THE GROUP (A): -59.4789 17.3675 9.2877 REMARK 3 T TENSOR REMARK 3 T11: 1.1850 T22: 0.2062 REMARK 3 T33: 0.3078 T12: 0.2758 REMARK 3 T13: -0.0108 T23: 0.0750 REMARK 3 L TENSOR REMARK 3 L11: 0.2846 L22: 0.5211 REMARK 3 L33: 0.4111 L12: 0.2661 REMARK 3 L13: -0.1506 L23: 0.1798 REMARK 3 S TENSOR REMARK 3 S11: -0.1483 S12: -0.0018 S13: -0.0563 REMARK 3 S21: 1.3443 S22: 0.3394 S23: -0.0224 REMARK 3 S31: 0.0380 S32: -0.2707 S33: 0.1361 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 125:220) REMARK 3 ORIGIN FOR THE GROUP (A): -54.4970 16.5055 -13.9962 REMARK 3 T TENSOR REMARK 3 T11: 0.3269 T22: 0.2604 REMARK 3 T33: 0.2363 T12: 0.0185 REMARK 3 T13: 0.0116 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.7389 L22: 0.2910 REMARK 3 L33: 0.2781 L12: -0.1445 REMARK 3 L13: 0.3183 L23: -0.2658 REMARK 3 S TENSOR REMARK 3 S11: -0.0404 S12: 0.1762 S13: 0.0935 REMARK 3 S21: -0.1288 S22: 0.0796 S23: 0.0213 REMARK 3 S31: -0.1184 S32: -0.1427 S33: -0.0197 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 221:454) REMARK 3 ORIGIN FOR THE GROUP (A): -69.9441 38.3868 -19.3929 REMARK 3 T TENSOR REMARK 3 T11: 0.4497 T22: 0.2334 REMARK 3 T33: 0.2414 T12: 0.3263 REMARK 3 T13: 0.1295 T23: 0.1918 REMARK 3 L TENSOR REMARK 3 L11: 0.8847 L22: 0.5718 REMARK 3 L33: 0.4511 L12: 0.3154 REMARK 3 L13: 0.1225 L23: -0.1212 REMARK 3 S TENSOR REMARK 3 S11: -0.3168 S12: 0.3532 S13: 0.0339 REMARK 3 S21: 0.6032 S22: 0.4347 S23: 0.3084 REMARK 3 S31: -0.6463 S32: -0.5003 S33: 0.0450 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 5:124) REMARK 3 ORIGIN FOR THE GROUP (A): -36.9889 2.2970 -30.1917 REMARK 3 T TENSOR REMARK 3 T11: 0.4561 T22: 0.2591 REMARK 3 T33: 0.2627 T12: 0.0461 REMARK 3 T13: -0.1036 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 0.2992 L22: 0.2884 REMARK 3 L33: 0.5606 L12: -0.2327 REMARK 3 L13: 0.2199 L23: -0.0816 REMARK 3 S TENSOR REMARK 3 S11: 0.2651 S12: 0.0633 S13: -0.2329 REMARK 3 S21: -0.2600 S22: 0.0119 S23: 0.0723 REMARK 3 S31: 0.5184 S32: 0.1713 S33: -0.0984 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 125:220) REMARK 3 ORIGIN FOR THE GROUP (A): -37.2602 10.7216 -8.3908 REMARK 3 T TENSOR REMARK 3 T11: 0.3365 T22: 0.2210 REMARK 3 T33: 0.2763 T12: -0.0019 REMARK 3 T13: -0.0690 T23: 0.0525 REMARK 3 L TENSOR REMARK 3 L11: 0.5812 L22: 0.0724 REMARK 3 L33: 0.5173 L12: 0.0098 REMARK 3 L13: 0.2596 L23: -0.1469 REMARK 3 S TENSOR REMARK 3 S11: 0.1912 S12: -0.1088 S13: -0.0871 REMARK 3 S21: 0.0157 S22: -0.1564 S23: -0.0340 REMARK 3 S31: -0.0790 S32: -0.0578 S33: 0.0074 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 221:455) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4098 21.0218 -10.1303 REMARK 3 T TENSOR REMARK 3 T11: 0.3269 T22: 0.2215 REMARK 3 T33: 0.4804 T12: -0.0731 REMARK 3 T13: -0.0479 T23: 0.1101 REMARK 3 L TENSOR REMARK 3 L11: 0.6677 L22: 0.8236 REMARK 3 L33: 0.7033 L12: 0.1754 REMARK 3 L13: 0.1801 L23: -0.2618 REMARK 3 S TENSOR REMARK 3 S11: -0.0056 S12: 0.0616 S13: 0.0471 REMARK 3 S21: 0.0942 S22: -0.1516 S23: -0.6336 REMARK 3 S31: -0.0817 S32: 0.1048 S33: 0.0636 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4O7O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084145. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51256 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 17.60 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.20 REMARK 200 R MERGE FOR SHELL (I) : 0.54800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, 1M (NH4)2SO4, 1% REMARK 280 PEG3350, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 306.46467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 153.23233 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 229.84850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 76.61617 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 383.08083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 306.46467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 153.23233 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 76.61617 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 229.84850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 383.08083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ARG A 3 REMARK 465 SER A 4 REMARK 465 ASP A 5 REMARK 465 PHE A 70 REMARK 465 GLU A 71 REMARK 465 PRO A 72 REMARK 465 ALA A 73 REMARK 465 SER A 74 REMARK 465 GLU A 75 REMARK 465 TYR A 76 REMARK 465 GLY A 77 REMARK 465 THR A 78 REMARK 465 ARG A 195 REMARK 465 PRO A 196 REMARK 465 ASN A 197 REMARK 465 ARG A 198 REMARK 465 SER A 199 REMARK 465 PRO A 200 REMARK 465 THR A 201 REMARK 465 SER A 455 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ARG B 3 REMARK 465 SER B 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 129 OD2 ASP B 69 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 136 C - N - CA ANGL. DEV. = 12.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 82 -61.50 -126.33 REMARK 500 ASP A 87 -2.93 73.07 REMARK 500 ARG A 137 153.98 177.71 REMARK 500 GLN A 143 70.29 39.56 REMARK 500 ARG A 160 -73.48 -83.36 REMARK 500 ASP A 339 74.95 63.67 REMARK 500 TYR A 433 -76.01 -85.33 REMARK 500 GLU A 434 -53.31 -28.69 REMARK 500 THR A 435 -70.18 -29.22 REMARK 500 THR A 453 -61.63 -108.17 REMARK 500 ALA B 31 -73.91 -103.28 REMARK 500 SER B 116 -112.59 51.40 REMARK 500 PRO B 131 -178.94 -65.50 REMARK 500 ARG B 160 -73.70 -94.44 REMARK 500 ARG B 198 -67.85 -133.19 REMARK 500 SER B 199 150.92 173.86 REMARK 500 PRO B 200 46.71 -87.93 REMARK 500 ASP B 202 -3.09 82.56 REMARK 500 PRO B 277 49.87 -80.52 REMARK 500 ASP B 339 74.76 60.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 142 GLN A 143 -35.93 REMARK 500 PRO A 293 GLU A 294 -148.79 REMARK 500 PRO A 344 GLY A 345 -34.24 REMARK 500 THR B 115 SER B 116 141.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4O7P RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS MALTOSE KINASE MAK REMARK 900 COMPLEXED WITH MALTOSE DBREF 4O7O A 1 455 UNP O07177 MAK1_MYCTU 1 455 DBREF 4O7O B 1 455 UNP O07177 MAK1_MYCTU 1 455 SEQRES 1 A 455 MET THR ARG SER ASP THR LEU ALA THR LYS LEU PRO TRP SEQRES 2 A 455 SER ASP TRP LEU SER ARG GLN ARG TRP TYR ALA GLY ARG SEQRES 3 A 455 ASN ARG GLU LEU ALA THR VAL LYS PRO GLY VAL VAL VAL SEQRES 4 A 455 ALA LEU ARG HIS ASN LEU ASP LEU VAL LEU VAL ASP VAL SEQRES 5 A 455 THR TYR THR ASP GLY ALA THR GLU ARG TYR GLN VAL LEU SEQRES 6 A 455 VAL GLY TRP ASP PHE GLU PRO ALA SER GLU TYR GLY THR SEQRES 7 A 455 LYS ALA ALA ILE GLY VAL ALA ASP ASP ARG THR GLY PHE SEQRES 8 A 455 ASP ALA LEU TYR ASP VAL ALA GLY PRO GLN PHE LEU LEU SEQRES 9 A 455 SER LEU ILE VAL SER SER ALA VAL CYS GLY THR SER THR SEQRES 10 A 455 GLY GLU VAL THR PHE THR ARG GLU PRO ASP VAL GLU LEU SEQRES 11 A 455 PRO PHE ALA ALA GLN PRO ARG VAL CYS ASP ALA GLU GLN SEQRES 12 A 455 SER ASN THR SER VAL ILE PHE ASP ARG ARG ALA ILE LEU SEQRES 13 A 455 LYS VAL PHE ARG ARG VAL SER SER GLY ILE ASN PRO ASP SEQRES 14 A 455 ILE GLU LEU ASN ARG VAL LEU THR ARG ALA GLY ASN PRO SEQRES 15 A 455 HIS VAL ALA ARG LEU LEU GLY ALA TYR GLN PHE GLY ARG SEQRES 16 A 455 PRO ASN ARG SER PRO THR ASP ALA LEU ALA TYR ALA LEU SEQRES 17 A 455 GLY MET VAL THR GLU TYR GLU ALA ASN ALA ALA GLU GLY SEQRES 18 A 455 TRP ALA MET ALA THR ALA SER VAL ARG ASP LEU PHE ALA SEQRES 19 A 455 GLU GLY ASP LEU TYR ALA HIS GLU VAL GLY GLY ASP PHE SEQRES 20 A 455 ALA GLY GLU SER TYR ARG LEU GLY GLU ALA VAL ALA SER SEQRES 21 A 455 VAL HIS ALA THR LEU ALA ASP SER LEU GLY THR ALA GLN SEQRES 22 A 455 ALA THR PHE PRO VAL ASP ARG MET LEU ALA ARG LEU SER SEQRES 23 A 455 SER THR VAL ALA VAL VAL PRO GLU LEU ARG GLU TYR ALA SEQRES 24 A 455 PRO THR ILE GLU GLN GLN PHE GLN LYS LEU ALA ALA GLU SEQRES 25 A 455 ALA ILE THR VAL GLN ARG VAL HIS GLY ASP LEU HIS LEU SEQRES 26 A 455 GLY GLN VAL LEU ARG THR PRO GLU SER TRP LEU LEU ILE SEQRES 27 A 455 ASP PHE GLU GLY GLU PRO GLY GLN PRO LEU ASP GLU ARG SEQRES 28 A 455 ARG ALA PRO ASP SER PRO LEU ARG ASP VAL ALA GLY VAL SEQRES 29 A 455 LEU ARG SER PHE GLU TYR ALA ALA TYR GLY PRO LEU VAL SEQRES 30 A 455 ASP GLN ALA THR ASP LYS GLN LEU ALA ALA ARG ALA ARG SEQRES 31 A 455 GLU TRP VAL GLU ARG ASN ARG ALA ALA PHE CYS ASP GLY SEQRES 32 A 455 TYR ALA VAL ALA SER GLY ILE ASP PRO ARG ASP SER ALA SEQRES 33 A 455 LEU LEU LEU GLY ALA TYR GLU LEU ASP LYS ALA VAL TYR SEQRES 34 A 455 GLU THR GLY TYR GLU THR ARG HIS ARG PRO GLY TRP LEU SEQRES 35 A 455 PRO ILE PRO LEU ARG SER ILE ALA ARG LEU THR ALA SER SEQRES 1 B 455 MET THR ARG SER ASP THR LEU ALA THR LYS LEU PRO TRP SEQRES 2 B 455 SER ASP TRP LEU SER ARG GLN ARG TRP TYR ALA GLY ARG SEQRES 3 B 455 ASN ARG GLU LEU ALA THR VAL LYS PRO GLY VAL VAL VAL SEQRES 4 B 455 ALA LEU ARG HIS ASN LEU ASP LEU VAL LEU VAL ASP VAL SEQRES 5 B 455 THR TYR THR ASP GLY ALA THR GLU ARG TYR GLN VAL LEU SEQRES 6 B 455 VAL GLY TRP ASP PHE GLU PRO ALA SER GLU TYR GLY THR SEQRES 7 B 455 LYS ALA ALA ILE GLY VAL ALA ASP ASP ARG THR GLY PHE SEQRES 8 B 455 ASP ALA LEU TYR ASP VAL ALA GLY PRO GLN PHE LEU LEU SEQRES 9 B 455 SER LEU ILE VAL SER SER ALA VAL CYS GLY THR SER THR SEQRES 10 B 455 GLY GLU VAL THR PHE THR ARG GLU PRO ASP VAL GLU LEU SEQRES 11 B 455 PRO PHE ALA ALA GLN PRO ARG VAL CYS ASP ALA GLU GLN SEQRES 12 B 455 SER ASN THR SER VAL ILE PHE ASP ARG ARG ALA ILE LEU SEQRES 13 B 455 LYS VAL PHE ARG ARG VAL SER SER GLY ILE ASN PRO ASP SEQRES 14 B 455 ILE GLU LEU ASN ARG VAL LEU THR ARG ALA GLY ASN PRO SEQRES 15 B 455 HIS VAL ALA ARG LEU LEU GLY ALA TYR GLN PHE GLY ARG SEQRES 16 B 455 PRO ASN ARG SER PRO THR ASP ALA LEU ALA TYR ALA LEU SEQRES 17 B 455 GLY MET VAL THR GLU TYR GLU ALA ASN ALA ALA GLU GLY SEQRES 18 B 455 TRP ALA MET ALA THR ALA SER VAL ARG ASP LEU PHE ALA SEQRES 19 B 455 GLU GLY ASP LEU TYR ALA HIS GLU VAL GLY GLY ASP PHE SEQRES 20 B 455 ALA GLY GLU SER TYR ARG LEU GLY GLU ALA VAL ALA SER SEQRES 21 B 455 VAL HIS ALA THR LEU ALA ASP SER LEU GLY THR ALA GLN SEQRES 22 B 455 ALA THR PHE PRO VAL ASP ARG MET LEU ALA ARG LEU SER SEQRES 23 B 455 SER THR VAL ALA VAL VAL PRO GLU LEU ARG GLU TYR ALA SEQRES 24 B 455 PRO THR ILE GLU GLN GLN PHE GLN LYS LEU ALA ALA GLU SEQRES 25 B 455 ALA ILE THR VAL GLN ARG VAL HIS GLY ASP LEU HIS LEU SEQRES 26 B 455 GLY GLN VAL LEU ARG THR PRO GLU SER TRP LEU LEU ILE SEQRES 27 B 455 ASP PHE GLU GLY GLU PRO GLY GLN PRO LEU ASP GLU ARG SEQRES 28 B 455 ARG ALA PRO ASP SER PRO LEU ARG ASP VAL ALA GLY VAL SEQRES 29 B 455 LEU ARG SER PHE GLU TYR ALA ALA TYR GLY PRO LEU VAL SEQRES 30 B 455 ASP GLN ALA THR ASP LYS GLN LEU ALA ALA ARG ALA ARG SEQRES 31 B 455 GLU TRP VAL GLU ARG ASN ARG ALA ALA PHE CYS ASP GLY SEQRES 32 B 455 TYR ALA VAL ALA SER GLY ILE ASP PRO ARG ASP SER ALA SEQRES 33 B 455 LEU LEU LEU GLY ALA TYR GLU LEU ASP LYS ALA VAL TYR SEQRES 34 B 455 GLU THR GLY TYR GLU THR ARG HIS ARG PRO GLY TRP LEU SEQRES 35 B 455 PRO ILE PRO LEU ARG SER ILE ALA ARG LEU THR ALA SER HET SO4 A 501 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *154(H2 O) HELIX 1 1 THR A 6 LEU A 11 5 6 HELIX 2 2 PRO A 12 SER A 18 1 7 HELIX 3 3 LEU A 94 ASP A 96 5 3 HELIX 4 4 VAL A 97 SER A 109 1 13 HELIX 5 5 ASN A 167 ALA A 179 1 13 HELIX 6 6 GLY A 221 GLU A 235 1 15 HELIX 7 7 GLU A 242 ASP A 246 5 5 HELIX 8 8 PHE A 247 GLY A 270 1 24 HELIX 9 9 PRO A 277 VAL A 292 1 16 HELIX 10 10 TYR A 298 LYS A 308 1 11 HELIX 11 11 HIS A 324 GLY A 326 5 3 HELIX 12 12 PRO A 347 ARG A 352 1 6 HELIX 13 13 SER A 356 GLY A 374 1 19 HELIX 14 14 PRO A 375 VAL A 377 5 3 HELIX 15 15 ASP A 382 GLY A 409 1 28 HELIX 16 16 ASP A 411 ASP A 414 5 4 HELIX 17 17 SER A 415 ARG A 438 1 24 HELIX 18 18 PRO A 439 TRP A 441 5 3 HELIX 19 19 LEU A 442 ALA A 454 1 13 HELIX 20 20 THR B 6 LEU B 11 5 6 HELIX 21 21 PRO B 12 ARG B 19 1 8 HELIX 22 22 PRO B 72 TYR B 76 5 5 HELIX 23 23 LEU B 94 ASP B 96 5 3 HELIX 24 24 VAL B 97 SER B 109 1 13 HELIX 25 25 ASN B 167 ALA B 179 1 13 HELIX 26 26 GLY B 221 GLY B 236 1 16 HELIX 27 27 PHE B 247 GLY B 270 1 24 HELIX 28 28 PRO B 277 VAL B 292 1 16 HELIX 29 29 PRO B 293 ARG B 296 5 4 HELIX 30 30 TYR B 298 LYS B 308 1 11 HELIX 31 31 HIS B 324 GLY B 326 5 3 HELIX 32 32 PRO B 347 ARG B 352 1 6 HELIX 33 33 SER B 356 GLY B 374 1 19 HELIX 34 34 PRO B 375 VAL B 377 5 3 HELIX 35 35 ASP B 382 GLY B 409 1 28 HELIX 36 36 ASP B 411 ASP B 414 5 4 HELIX 37 37 SER B 415 HIS B 437 1 23 HELIX 38 38 ARG B 438 TRP B 441 5 4 HELIX 39 39 LEU B 442 ALA B 454 1 13 SHEET 1 A 5 LEU A 30 ARG A 42 0 SHEET 2 A 5 LEU A 45 TYR A 54 -1 O LEU A 49 N GLY A 36 SHEET 3 A 5 THR A 59 ASP A 69 -1 O VAL A 66 N ASP A 46 SHEET 4 A 5 ARG A 88 ASP A 92 -1 O THR A 89 N ASP A 69 SHEET 5 A 5 ALA A 81 ALA A 85 -1 N GLY A 83 O GLY A 90 SHEET 1 B 4 LEU A 30 ARG A 42 0 SHEET 2 B 4 LEU A 45 TYR A 54 -1 O LEU A 49 N GLY A 36 SHEET 3 B 4 THR A 59 ASP A 69 -1 O VAL A 66 N ASP A 46 SHEET 4 B 4 ARG A 161 VAL A 162 -1 O VAL A 162 N ARG A 61 SHEET 1 C10 THR A 115 THR A 117 0 SHEET 2 C10 VAL A 120 ARG A 124 -1 O PHE A 122 N THR A 115 SHEET 3 C10 ARG A 186 PHE A 193 -1 O ALA A 190 N THR A 123 SHEET 4 C10 TYR A 206 GLU A 215 -1 O VAL A 211 N LEU A 188 SHEET 5 C10 ASN A 145 PHE A 159 -1 N ARG A 153 O TYR A 214 SHEET 6 C10 ASN B 145 PHE B 159 -1 O VAL B 158 N THR A 146 SHEET 7 C10 TYR B 206 GLU B 215 -1 O MET B 210 N LYS B 157 SHEET 8 C10 ARG B 186 GLY B 194 -1 N PHE B 193 O TYR B 206 SHEET 9 C10 GLY B 118 ARG B 124 -1 N THR B 123 O ALA B 190 SHEET 10 C10 VAL B 112 THR B 115 -1 N THR B 115 O GLY B 118 SHEET 1 D 4 VAL A 138 ALA A 141 0 SHEET 2 D 4 ASN A 145 PHE A 159 -1 O SER A 147 N CYS A 139 SHEET 3 D 4 ASN B 145 PHE B 159 -1 O VAL B 158 N THR A 146 SHEET 4 D 4 ARG B 137 CYS B 139 -1 N CYS B 139 O SER B 147 SHEET 1 E 3 ALA A 219 GLU A 220 0 SHEET 2 E 3 VAL A 328 ARG A 330 -1 O ARG A 330 N ALA A 219 SHEET 3 E 3 TRP A 335 LEU A 337 -1 O LEU A 336 N LEU A 329 SHEET 1 F 2 THR A 271 THR A 275 0 SHEET 2 F 2 ALA A 313 GLN A 317 -1 O VAL A 316 N ALA A 272 SHEET 1 G 5 LEU B 30 ARG B 42 0 SHEET 2 G 5 LEU B 45 TYR B 54 -1 O LEU B 47 N VAL B 39 SHEET 3 G 5 THR B 59 GLY B 67 -1 O GLU B 60 N VAL B 52 SHEET 4 G 5 ARG B 88 ASP B 92 -1 O PHE B 91 N GLY B 67 SHEET 5 G 5 ALA B 81 ALA B 85 -1 N GLY B 83 O GLY B 90 SHEET 1 H 4 LEU B 30 ARG B 42 0 SHEET 2 H 4 LEU B 45 TYR B 54 -1 O LEU B 47 N VAL B 39 SHEET 3 H 4 THR B 59 GLY B 67 -1 O GLU B 60 N VAL B 52 SHEET 4 H 4 ARG B 161 VAL B 162 -1 O VAL B 162 N ARG B 61 SHEET 1 I 3 ALA B 219 GLU B 220 0 SHEET 2 I 3 VAL B 328 ARG B 330 -1 O ARG B 330 N ALA B 219 SHEET 3 I 3 TRP B 335 LEU B 337 -1 O LEU B 336 N LEU B 329 SHEET 1 J 2 THR B 271 THR B 275 0 SHEET 2 J 2 ALA B 313 GLN B 317 -1 O VAL B 316 N ALA B 272 CISPEP 1 ALA B 24 GLY B 25 0 0.12 CISPEP 2 GLY B 236 ASP B 237 0 18.35 SITE 1 AC1 4 GLY A 249 ARG A 253 HOH A 613 HOH B 534 CRYST1 96.610 96.610 459.697 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010351 0.005976 0.000000 0.00000 SCALE2 0.000000 0.011952 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002175 0.00000