HEADER HYDROLASE 31-DEC-13 4O8Z TITLE CRYSTAL STRUCTURE OF HUMAN SIRT3 IN COMPLEX WITH COMPOUND (2- TITLE 2 BUTYLBENZOFURAN-3-YL)(4-(2-(DIETHYLAMINO)ETHOXY)-3,5-DIIODOPHENYL) TITLE 3 METHANONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-3, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 116-399; COMPND 5 SYNONYM: HSIRT3, REGULATORY PROTEIN SIR2 HOMOLOG 3, SIR2-LIKE PROTEIN COMPND 6 3; COMPND 7 EC: 3.5.1.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SIRT3, SIR2L3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS MITOCHONDRIA NAD+-DEPENDENT DEACETYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.LIU REVDAT 2 08-NOV-23 4O8Z 1 REMARK SEQADV LINK REVDAT 1 22-APR-15 4O8Z 0 JRNL AUTH B.LIU JRNL TITL CRYSTAL STRUCTURE OF HUMAN SIRT3 IN COMPLEX WITH COMPOUND JRNL TITL 2 (2-BUTYLBENZOFURAN-3-YL)(4-(2-(DIETHYLAMINO)ETHOXY)-3, JRNL TITL 3 5-DIIODOPHENYL)METHANONE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 100.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 22590 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1216 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1522 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.1950 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.2170 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2133 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 217 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.27000 REMARK 3 B12 (A**2) : 0.04000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.147 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.135 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.093 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.279 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2230 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2160 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3039 ; 1.943 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4969 ; 1.048 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 272 ; 6.284 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 96 ;35.313 ;23.021 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 355 ;14.089 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;17.170 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 340 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2486 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 502 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1091 ; 2.901 ; 2.868 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1090 ; 2.901 ; 2.863 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1362 ; 4.034 ; 4.272 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1363 ; 4.031 ; 4.265 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1139 ; 4.034 ; 3.477 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1140 ; 5.665 ; 3.608 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1678 ; 8.411 ; 5.232 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2657 ;15.584 ;27.411 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2584 ;15.697 ;27.112 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4O8Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979220 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24073 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 100.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.42700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3GLS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.43667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.21833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 22.82750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 7.60917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.04583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL STRUCTURE OF HUMAN SIRT3 IN COMPLEX WITH COMPOUND REMARK 300 (2-BUTYLBENZOFURAN-3-YL)(4-(2-(DIETHYLAMINO)ETHOXY)-3,5- REMARK 300 DIIODOPHENYL)METHANONE REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 97 REMARK 465 HIS A 98 REMARK 465 HIS A 99 REMARK 465 HIS A 100 REMARK 465 HIS A 101 REMARK 465 HIS A 102 REMARK 465 ASP A 103 REMARK 465 TYR A 104 REMARK 465 ASP A 105 REMARK 465 ILE A 106 REMARK 465 PRO A 107 REMARK 465 THR A 108 REMARK 465 THR A 109 REMARK 465 GLU A 110 REMARK 465 ASN A 111 REMARK 465 LEU A 112 REMARK 465 TYR A 113 REMARK 465 PHE A 114 REMARK 465 GLN A 115 REMARK 465 GLY A 116 REMARK 465 SER A 117 REMARK 465 SER A 118 REMARK 465 ASP A 119 REMARK 465 LYS A 120 REMARK 465 GLY A 121 REMARK 465 ARG A 158 REMARK 465 ASP A 395 REMARK 465 GLY A 396 REMARK 465 PRO A 397 REMARK 465 ASP A 398 REMARK 465 LYS A 399 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 508 O HOH A 680 1556 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 154 CB - CA - C ANGL. DEV. = -12.3 DEGREES REMARK 500 ARG A 269 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 276 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 276 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 139 67.31 -116.79 REMARK 500 LEU A 168 -63.33 -105.27 REMARK 500 ASP A 172 65.23 -175.96 REMARK 500 VAL A 258 -61.25 -102.57 REMARK 500 ASP A 290 46.54 -80.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 256 SG REMARK 620 2 CYS A 259 SG 110.3 REMARK 620 3 CYS A 280 SG 107.8 109.7 REMARK 620 4 CYS A 283 SG 91.7 119.1 116.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BBI A 402 DBREF 4O8Z A 116 399 UNP Q9NTG7 SIR3_HUMAN 116 399 SEQADV 4O8Z HIS A 97 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z HIS A 98 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z HIS A 99 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z HIS A 100 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z HIS A 101 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z HIS A 102 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z ASP A 103 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z TYR A 104 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z ASP A 105 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z ILE A 106 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z PRO A 107 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z THR A 108 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z THR A 109 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z GLU A 110 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z ASN A 111 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z LEU A 112 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z TYR A 113 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z PHE A 114 UNP Q9NTG7 EXPRESSION TAG SEQADV 4O8Z GLN A 115 UNP Q9NTG7 EXPRESSION TAG SEQRES 1 A 303 HIS HIS HIS HIS HIS HIS ASP TYR ASP ILE PRO THR THR SEQRES 2 A 303 GLU ASN LEU TYR PHE GLN GLY SER SER ASP LYS GLY LYS SEQRES 3 A 303 LEU SER LEU GLN ASP VAL ALA GLU LEU ILE ARG ALA ARG SEQRES 4 A 303 ALA CYS GLN ARG VAL VAL VAL MET VAL GLY ALA GLY ILE SEQRES 5 A 303 SER THR PRO SER GLY ILE PRO ASP PHE ARG SER PRO GLY SEQRES 6 A 303 SER GLY LEU TYR SER ASN LEU GLN GLN TYR ASP LEU PRO SEQRES 7 A 303 TYR PRO GLU ALA ILE PHE GLU LEU PRO PHE PHE PHE HIS SEQRES 8 A 303 ASN PRO LYS PRO PHE PHE THR LEU ALA LYS GLU LEU TYR SEQRES 9 A 303 PRO GLY ASN TYR LYS PRO ASN VAL THR HIS TYR PHE LEU SEQRES 10 A 303 ARG LEU LEU HIS ASP LYS GLY LEU LEU LEU ARG LEU TYR SEQRES 11 A 303 THR GLN ASN ILE ASP GLY LEU GLU ARG VAL SER GLY ILE SEQRES 12 A 303 PRO ALA SER LYS LEU VAL GLU ALA HIS GLY THR PHE ALA SEQRES 13 A 303 SER ALA THR CYS THR VAL CYS GLN ARG PRO PHE PRO GLY SEQRES 14 A 303 GLU ASP ILE ARG ALA ASP VAL MET ALA ASP ARG VAL PRO SEQRES 15 A 303 ARG CYS PRO VAL CYS THR GLY VAL VAL LYS PRO ASP ILE SEQRES 16 A 303 VAL PHE PHE GLY GLU PRO LEU PRO GLN ARG PHE LEU LEU SEQRES 17 A 303 HIS VAL VAL ASP PHE PRO MET ALA ASP LEU LEU LEU ILE SEQRES 18 A 303 LEU GLY THR SER LEU GLU VAL GLU PRO PHE ALA SER LEU SEQRES 19 A 303 THR GLU ALA VAL ARG SER SER VAL PRO ARG LEU LEU ILE SEQRES 20 A 303 ASN ARG ASP LEU VAL GLY PRO LEU ALA TRP HIS PRO ARG SEQRES 21 A 303 SER ARG ASP VAL ALA GLN LEU GLY ASP VAL VAL HIS GLY SEQRES 22 A 303 VAL GLU SER LEU VAL GLU LEU LEU GLY TRP THR GLU GLU SEQRES 23 A 303 MET ARG ASP LEU VAL GLN ARG GLU THR GLY LYS LEU ASP SEQRES 24 A 303 GLY PRO ASP LYS HET ZN A 401 1 HET BBI A 402 31 HETNAM ZN ZINC ION HETNAM BBI (2-BUTYL-1-BENZOFURAN-3-YL){4-[2-(DIETHYLAMINO)ETHOXY]- HETNAM 2 BBI 3,5-DIIODOPHENYL}METHANONE FORMUL 2 ZN ZN 2+ FORMUL 3 BBI C25 H29 I2 N O3 FORMUL 4 HOH *217(H2 O) HELIX 1 1 SER A 124 ALA A 134 1 11 HELIX 2 2 ALA A 146 GLY A 153 5 8 HELIX 3 3 SER A 162 LEU A 168 1 7 HELIX 4 4 TYR A 175 PHE A 180 5 6 HELIX 5 5 GLU A 181 ASN A 188 1 8 HELIX 6 6 PRO A 189 TYR A 200 1 12 HELIX 7 7 ASN A 207 LYS A 219 1 13 HELIX 8 8 GLY A 232 SER A 237 1 6 HELIX 9 9 PRO A 240 SER A 242 5 3 HELIX 10 10 GLY A 265 ALA A 274 1 10 HELIX 11 11 PRO A 299 LEU A 303 5 5 HELIX 12 12 LEU A 304 ALA A 312 1 9 HELIX 13 13 PRO A 326 THR A 331 1 6 HELIX 14 14 GLY A 349 HIS A 354 1 6 HELIX 15 15 ASP A 365 GLY A 378 1 14 HELIX 16 16 TRP A 379 LEU A 394 1 16 SHEET 1 A 6 LEU A 244 GLU A 246 0 SHEET 2 A 6 LEU A 222 THR A 227 1 N LEU A 225 O VAL A 245 SHEET 3 A 6 VAL A 140 VAL A 144 1 N VAL A 142 O TYR A 226 SHEET 4 A 6 LEU A 314 LEU A 318 1 O LEU A 318 N MET A 143 SHEET 5 A 6 ARG A 340 ASN A 344 1 O ILE A 343 N ILE A 317 SHEET 6 A 6 ASP A 359 LEU A 363 1 O GLN A 362 N LEU A 342 SHEET 1 B 3 PRO A 262 PRO A 264 0 SHEET 2 B 3 GLY A 249 CYS A 256 -1 N ALA A 254 O PHE A 263 SHEET 3 B 3 VAL A 287 ILE A 291 -1 O LYS A 288 N THR A 255 LINK SG CYS A 256 ZN ZN A 401 1555 1555 2.39 LINK SG CYS A 259 ZN ZN A 401 1555 1555 2.35 LINK SG CYS A 280 ZN ZN A 401 1555 1555 2.26 LINK SG CYS A 283 ZN ZN A 401 1555 1555 2.27 CISPEP 1 GLU A 325 PRO A 326 0 0.54 SITE 1 AC1 4 CYS A 256 CYS A 259 CYS A 280 CYS A 283 SITE 1 AC2 3 HIS A 248 VAL A 292 PHE A 294 CRYST1 116.317 116.317 45.655 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008597 0.004964 0.000000 0.00000 SCALE2 0.000000 0.009927 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021903 0.00000