HEADER LYASE 31-DEC-13 4O90 TITLE CRYSTAL STRUCTURE OF CHORISMATE SYNTHASE FROM ACINETOBACTER BAUMANNII TITLE 2 AT 2.6A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHORISMATE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PHOSPHOLYASE; COMPND 5 EC: 4.2.3.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 575584; SOURCE 4 STRAIN: ATCC 19606; SOURCE 5 GENE: AROC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SYNTHESIS OF CHORISMATE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAUDHARY,N.SINGH,P.K.SHUKLA,M.SINHA,A.BHUSHAN,P.KAUR,S.SHARMA, AUTHOR 2 T.P.SINGH REVDAT 2 08-NOV-23 4O90 1 REMARK REVDAT 1 22-JAN-14 4O90 0 JRNL AUTH A.CHAUDHARY,N.SINGH,P.K.SHUKLA,M.SINHA,A.BHUSHAN,P.KAUR, JRNL AUTH 2 S.SHARMA,T.P.SINGH JRNL TITL CRYSTAL STRUCTURE OF CHORISMATE SYNTHASE FROM ACINETOBACTER JRNL TITL 2 BAUMANNII AT 2.6A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2664768.300 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 21001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1015 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3269 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 157 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.024 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4400 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 168 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -11.86000 REMARK 3 B22 (A**2) : 4.49000 REMARK 3 B33 (A**2) : 7.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM SIGMAA (A) : -0.0 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.47 REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 BOND ANGLES (DEGREES) : 2.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 28.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.270 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.210 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.710 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.010 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.410 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.27 REMARK 3 BSOL : 52.06 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : TLA.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : TLA.TOP REMARK 3 TOPOLOGY FILE 5 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4O90 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084193. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21001 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 32.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 4LJ2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM TRIS-HCL, 0.2M MGCL2, 20% REMARK 280 PEG3350, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 54.36950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.59600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.36950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.59600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 91 REMARK 465 SER A 92 REMARK 465 LYS A 93 REMARK 465 ASP A 94 REMARK 465 TYR A 95 REMARK 465 GLY A 96 REMARK 465 ASN A 97 REMARK 465 ILE A 98 REMARK 465 ALA A 99 REMARK 465 GLN A 100 REMARK 465 THR A 101 REMARK 465 PHE A 102 REMARK 465 ARG A 103 REMARK 465 PRO A 104 REMARK 465 GLY A 105 REMARK 465 HIS A 106 REMARK 465 ALA A 107 REMARK 465 ASP A 108 REMARK 465 TYR A 109 REMARK 465 THR A 110 REMARK 465 TYR A 111 REMARK 465 THR A 112 REMARK 465 GLN A 113 REMARK 465 LYS A 114 REMARK 465 TYR A 115 REMARK 465 GLY A 116 REMARK 465 PHE A 117 REMARK 465 ARG A 118 REMARK 465 ASP A 119 REMARK 465 TYR A 120 REMARK 465 ARG A 121 REMARK 465 GLY A 122 REMARK 465 GLY A 123 REMARK 465 GLY A 124 REMARK 465 ARG A 125 REMARK 465 ALA A 296 REMARK 465 SER A 297 REMARK 465 ILE A 298 REMARK 465 THR A 299 REMARK 465 THR A 300 REMARK 465 PRO A 301 REMARK 465 GLY A 302 REMARK 465 LYS A 303 REMARK 465 THR A 304 REMARK 465 ILE A 305 REMARK 465 ASN A 306 REMARK 465 LEU A 307 REMARK 465 ASN A 308 REMARK 465 ARG A 309 REMARK 465 GLU A 310 REMARK 465 ASP A 311 REMARK 465 THR A 312 REMARK 465 ASP A 313 REMARK 465 VAL A 314 REMARK 465 LEU A 315 REMARK 465 THR A 316 REMARK 465 LYS A 317 REMARK 465 ALA A 352 REMARK 465 ASP A 353 REMARK 465 VAL A 354 REMARK 465 VAL A 355 REMARK 465 PRO A 356 REMARK 465 PRO A 357 REMARK 465 PHE A 358 REMARK 465 ALA A 359 REMARK 465 PRO A 360 REMARK 465 ILE A 361 REMARK 465 GLU A 362 REMARK 465 PRO A 363 REMARK 465 LYS B 91 REMARK 465 SER B 92 REMARK 465 LYS B 93 REMARK 465 ASP B 94 REMARK 465 TYR B 95 REMARK 465 GLY B 96 REMARK 465 ASN B 97 REMARK 465 ILE B 98 REMARK 465 ALA B 99 REMARK 465 GLN B 100 REMARK 465 THR B 101 REMARK 465 PHE B 102 REMARK 465 ARG B 103 REMARK 465 PRO B 104 REMARK 465 GLY B 105 REMARK 465 HIS B 106 REMARK 465 ALA B 107 REMARK 465 ASP B 108 REMARK 465 TYR B 109 REMARK 465 THR B 110 REMARK 465 TYR B 111 REMARK 465 THR B 112 REMARK 465 GLN B 113 REMARK 465 LYS B 114 REMARK 465 TYR B 115 REMARK 465 GLY B 116 REMARK 465 PHE B 117 REMARK 465 ARG B 118 REMARK 465 ASP B 119 REMARK 465 TYR B 120 REMARK 465 ARG B 121 REMARK 465 GLY B 122 REMARK 465 GLY B 123 REMARK 465 GLY B 124 REMARK 465 ARG B 125 REMARK 465 ALA B 296 REMARK 465 SER B 297 REMARK 465 ILE B 298 REMARK 465 THR B 299 REMARK 465 THR B 300 REMARK 465 PRO B 301 REMARK 465 GLY B 302 REMARK 465 LYS B 303 REMARK 465 THR B 304 REMARK 465 ILE B 305 REMARK 465 ASN B 306 REMARK 465 LEU B 307 REMARK 465 ASN B 308 REMARK 465 ARG B 309 REMARK 465 GLU B 310 REMARK 465 ASP B 311 REMARK 465 THR B 312 REMARK 465 ASP B 313 REMARK 465 VAL B 314 REMARK 465 LEU B 315 REMARK 465 THR B 316 REMARK 465 LYS B 317 REMARK 465 ALA B 352 REMARK 465 ASP B 353 REMARK 465 VAL B 354 REMARK 465 VAL B 355 REMARK 465 PRO B 356 REMARK 465 PRO B 357 REMARK 465 PHE B 358 REMARK 465 ALA B 359 REMARK 465 PRO B 360 REMARK 465 ILE B 361 REMARK 465 GLU B 362 REMARK 465 PRO B 363 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 232 NE2 HIS A 232 CD2 -0.078 REMARK 500 HIS B 156 NE2 HIS B 156 CD2 -0.074 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 322 C - N - CD ANGL. DEV. = -21.4 DEGREES REMARK 500 GLY B 3 N - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 ASN B 4 N - CA - C ANGL. DEV. = 17.2 DEGREES REMARK 500 PRO B 50 C - N - CD ANGL. DEV. = -14.7 DEGREES REMARK 500 THR B 264 N - CA - C ANGL. DEV. = 17.7 DEGREES REMARK 500 PRO B 322 C - N - CD ANGL. DEV. = -20.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 55 -177.13 82.83 REMARK 500 THR A 57 -132.51 45.82 REMARK 500 PRO A 62 -155.46 -101.18 REMARK 500 ARG A 129 -11.51 82.87 REMARK 500 ALA A 239 -9.51 92.86 REMARK 500 ALA B 56 -129.12 62.90 REMARK 500 ALA B 239 -10.43 93.46 REMARK 500 LEU B 263 -168.20 89.49 REMARK 500 ARG B 319 12.47 80.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 2 GLY A 3 139.87 REMARK 500 SER A 53 LYS A 54 -125.09 REMARK 500 ALA A 128 ARG A 129 80.49 REMARK 500 LEU A 269 ALA A 270 142.14 REMARK 500 GLY B 256 HIS B 257 147.52 REMARK 500 SER B 265 HIS B 266 -37.19 REMARK 500 ASP B 321 PRO B 322 129.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TLA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TLA B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1R52 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE BIFUNCTIONAL CHORISMATE SYNTHASE FROM REMARK 900 SACCHAROMYCES CEREVISIAE REMARK 900 RELATED ID: 4LJ2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CHORISMATE SYNTHASE FROM ACINETOBACTER REMARK 900 BAUMANNII AT 3.15A RESOLUTION DBREF 4O90 A 1 363 UNP D0C7F3 D0C7F3_ACIBA 1 363 DBREF 4O90 B 1 363 UNP D0C7F3 D0C7F3_ACIBA 1 363 SEQRES 1 A 363 MET ALA GLY ASN SER ILE GLY GLN LEU PHE ARG VAL THR SEQRES 2 A 363 THR CYS GLY GLU SER HIS GLY VAL GLY LEU MET ALA ILE SEQRES 3 A 363 VAL ASP GLY VAL PRO PRO GLY LEU ALA LEU THR GLU GLU SEQRES 4 A 363 ASP LEU GLN LYS ASP LEU ASP ARG ARG LYS PRO GLY THR SEQRES 5 A 363 SER LYS PHE ALA THR GLN ARG LYS GLU PRO ASP GLN VAL SEQRES 6 A 363 GLU ILE ILE SER GLY VAL PHE GLU GLY LYS THR THR GLY SEQRES 7 A 363 THR PRO ILE GLY LEU LEU ILE ARG ASN THR ASP GLN LYS SEQRES 8 A 363 SER LYS ASP TYR GLY ASN ILE ALA GLN THR PHE ARG PRO SEQRES 9 A 363 GLY HIS ALA ASP TYR THR TYR THR GLN LYS TYR GLY PHE SEQRES 10 A 363 ARG ASP TYR ARG GLY GLY GLY ARG SER SER ALA ARG GLU SEQRES 11 A 363 THR ALA MET ARG VAL ALA ALA GLY ALA ILE ALA LYS LYS SEQRES 12 A 363 TYR LEU ALA GLU LYS PHE GLY VAL LEU ILE ARG GLY HIS SEQRES 13 A 363 VAL THR GLN ILE GLY ASN GLU VAL ALA GLU LYS LEU ASP SEQRES 14 A 363 TRP ASN GLU VAL PRO ASN ASN PRO PHE PHE CYS GLY ASP SEQRES 15 A 363 VAL ASP ALA VAL PRO ARG PHE GLU ALA LEU VAL THR SER SEQRES 16 A 363 LEU ARG GLU GLN GLY THR SER CYS GLY ALA LYS LEU GLU SEQRES 17 A 363 ILE LEU ALA GLU LYS VAL PRO VAL GLY TRP GLY GLU PRO SEQRES 18 A 363 VAL PHE ASP ARG LEU ASP ALA ASP ILE ALA HIS ALA MET SEQRES 19 A 363 MET SER ILE ASN ALA VAL LYS GLY VAL GLU ILE GLY ASP SEQRES 20 A 363 GLY PHE ALA VAL ALA GLY GLN PHE GLY HIS GLU THR ARG SEQRES 21 A 363 ASP GLU LEU THR SER HIS GLY PHE LEU ALA ASN HIS ALA SEQRES 22 A 363 GLY GLY ILE LEU GLY GLY ILE SER SER GLY GLN THR ILE SEQRES 23 A 363 ARG VAL ALA ILE ALA LEU LYS PRO THR ALA SER ILE THR SEQRES 24 A 363 THR PRO GLY LYS THR ILE ASN LEU ASN ARG GLU ASP THR SEQRES 25 A 363 ASP VAL LEU THR LYS GLY ARG HIS ASP PRO CYS VAL GLY SEQRES 26 A 363 VAL ARG ALA THR PRO ILE ALA GLU ALA MET LEU ALA ILE SEQRES 27 A 363 VAL LEU MET ASP HIS PHE LEU ARG HIS ARG ALA GLN ASN SEQRES 28 A 363 ALA ASP VAL VAL PRO PRO PHE ALA PRO ILE GLU PRO SEQRES 1 B 363 MET ALA GLY ASN SER ILE GLY GLN LEU PHE ARG VAL THR SEQRES 2 B 363 THR CYS GLY GLU SER HIS GLY VAL GLY LEU MET ALA ILE SEQRES 3 B 363 VAL ASP GLY VAL PRO PRO GLY LEU ALA LEU THR GLU GLU SEQRES 4 B 363 ASP LEU GLN LYS ASP LEU ASP ARG ARG LYS PRO GLY THR SEQRES 5 B 363 SER LYS PHE ALA THR GLN ARG LYS GLU PRO ASP GLN VAL SEQRES 6 B 363 GLU ILE ILE SER GLY VAL PHE GLU GLY LYS THR THR GLY SEQRES 7 B 363 THR PRO ILE GLY LEU LEU ILE ARG ASN THR ASP GLN LYS SEQRES 8 B 363 SER LYS ASP TYR GLY ASN ILE ALA GLN THR PHE ARG PRO SEQRES 9 B 363 GLY HIS ALA ASP TYR THR TYR THR GLN LYS TYR GLY PHE SEQRES 10 B 363 ARG ASP TYR ARG GLY GLY GLY ARG SER SER ALA ARG GLU SEQRES 11 B 363 THR ALA MET ARG VAL ALA ALA GLY ALA ILE ALA LYS LYS SEQRES 12 B 363 TYR LEU ALA GLU LYS PHE GLY VAL LEU ILE ARG GLY HIS SEQRES 13 B 363 VAL THR GLN ILE GLY ASN GLU VAL ALA GLU LYS LEU ASP SEQRES 14 B 363 TRP ASN GLU VAL PRO ASN ASN PRO PHE PHE CYS GLY ASP SEQRES 15 B 363 VAL ASP ALA VAL PRO ARG PHE GLU ALA LEU VAL THR SER SEQRES 16 B 363 LEU ARG GLU GLN GLY THR SER CYS GLY ALA LYS LEU GLU SEQRES 17 B 363 ILE LEU ALA GLU LYS VAL PRO VAL GLY TRP GLY GLU PRO SEQRES 18 B 363 VAL PHE ASP ARG LEU ASP ALA ASP ILE ALA HIS ALA MET SEQRES 19 B 363 MET SER ILE ASN ALA VAL LYS GLY VAL GLU ILE GLY ASP SEQRES 20 B 363 GLY PHE ALA VAL ALA GLY GLN PHE GLY HIS GLU THR ARG SEQRES 21 B 363 ASP GLU LEU THR SER HIS GLY PHE LEU ALA ASN HIS ALA SEQRES 22 B 363 GLY GLY ILE LEU GLY GLY ILE SER SER GLY GLN THR ILE SEQRES 23 B 363 ARG VAL ALA ILE ALA LEU LYS PRO THR ALA SER ILE THR SEQRES 24 B 363 THR PRO GLY LYS THR ILE ASN LEU ASN ARG GLU ASP THR SEQRES 25 B 363 ASP VAL LEU THR LYS GLY ARG HIS ASP PRO CYS VAL GLY SEQRES 26 B 363 VAL ARG ALA THR PRO ILE ALA GLU ALA MET LEU ALA ILE SEQRES 27 B 363 VAL LEU MET ASP HIS PHE LEU ARG HIS ARG ALA GLN ASN SEQRES 28 B 363 ALA ASP VAL VAL PRO PRO PHE ALA PRO ILE GLU PRO HET TLA A 401 10 HET GOL A 402 6 HET TLA B 401 10 HET GOL B 402 6 HETNAM TLA L(+)-TARTARIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 TLA 2(C4 H6 O6) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 7 HOH *168(H2 O) HELIX 1 1 THR A 37 ARG A 47 1 11 HELIX 2 2 THR A 131 GLY A 150 1 20 HELIX 3 3 ASP A 184 GLY A 200 1 17 HELIX 4 4 ARG A 225 MET A 235 1 11 HELIX 5 5 ASP A 247 GLN A 254 5 8 HELIX 6 6 CYS A 323 ARG A 327 5 5 HELIX 7 7 ALA A 328 GLN A 350 1 23 HELIX 8 8 GLU B 38 ASP B 46 1 9 HELIX 9 9 THR B 131 GLY B 150 1 20 HELIX 10 10 GLU B 172 ASN B 176 5 5 HELIX 11 11 ALA B 185 GLU B 198 1 14 HELIX 12 12 ARG B 225 MET B 235 1 11 HELIX 13 13 ASP B 247 ALA B 252 5 6 HELIX 14 14 CYS B 323 ARG B 327 5 5 HELIX 15 15 ALA B 328 GLN B 350 1 23 SHEET 1 A 5 SER A 5 ILE A 6 0 SHEET 2 A 5 ARG A 11 CYS A 15 -1 O VAL A 12 N ILE A 6 SHEET 3 A 5 GLY A 22 ASP A 28 -1 O ASP A 28 N ARG A 11 SHEET 4 A 5 ILE A 81 ARG A 86 -1 O ILE A 81 N VAL A 27 SHEET 5 A 5 VAL A 65 ILE A 67 -1 N GLU A 66 O LEU A 84 SHEET 1 B 2 VAL A 71 PHE A 72 0 SHEET 2 B 2 LYS A 75 THR A 76 -1 O LYS A 75 N PHE A 72 SHEET 1 C10 GLU A 163 VAL A 164 0 SHEET 2 C10 LEU A 152 ILE A 160 -1 N ILE A 160 O GLU A 163 SHEET 3 C10 ALA A 205 GLU A 212 -1 O GLU A 212 N LEU A 152 SHEET 4 C10 ILE A 286 LEU A 292 -1 O VAL A 288 N ILE A 209 SHEET 5 C10 VAL A 240 ILE A 245 -1 N LYS A 241 O ALA A 291 SHEET 6 C10 VAL B 240 ILE B 245 -1 O VAL B 243 N VAL A 243 SHEET 7 C10 ILE B 286 LEU B 292 -1 O ALA B 291 N LYS B 241 SHEET 8 C10 ALA B 205 GLU B 212 -1 N ILE B 209 O VAL B 288 SHEET 9 C10 LEU B 152 ILE B 160 -1 N HIS B 156 O GLU B 208 SHEET 10 C10 GLU B 163 VAL B 164 -1 O GLU B 163 N ILE B 160 SHEET 1 D 2 SER A 202 CYS A 203 0 SHEET 2 D 2 PHE B 255 GLY B 256 -1 O GLY B 256 N SER A 202 SHEET 1 E 2 ILE A 276 LEU A 277 0 SHEET 2 E 2 ILE A 280 SER A 281 -1 O ILE A 280 N LEU A 277 SHEET 1 F 5 SER B 5 ILE B 6 0 SHEET 2 F 5 ARG B 11 CYS B 15 -1 O VAL B 12 N ILE B 6 SHEET 3 F 5 GLY B 22 ASP B 28 -1 O ILE B 26 N THR B 13 SHEET 4 F 5 ILE B 81 ARG B 86 -1 O LEU B 83 N ALA B 25 SHEET 5 F 5 VAL B 65 SER B 69 -1 N ILE B 68 O GLY B 82 SHEET 1 G 2 VAL B 71 PHE B 72 0 SHEET 2 G 2 LYS B 75 THR B 76 -1 O LYS B 75 N PHE B 72 SHEET 1 H 2 ILE B 276 LEU B 277 0 SHEET 2 H 2 ILE B 280 SER B 281 -1 O ILE B 280 N LEU B 277 CISPEP 1 GLU A 61 PRO A 62 0 -18.47 CISPEP 2 PRO A 221 VAL A 222 0 -2.46 CISPEP 3 GLY B 51 THR B 52 0 5.60 CISPEP 4 PRO B 221 VAL B 222 0 -3.53 CISPEP 5 GLY B 267 PHE B 268 0 0.37 SITE 1 AC1 1 GOL A 402 SITE 1 AC2 2 TLA A 401 HOH A 574 SITE 1 AC3 3 LYS B 206 GOL B 402 HOH B 578 SITE 1 AC4 2 GLN B 159 TLA B 401 CRYST1 108.739 73.192 90.118 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009196 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013663 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011097 0.00000