HEADER OXIDOREDUCTASE 01-JAN-14 4O95
TITLE CRYSTAL STRUCTURE OF MAIZE CYTOKININ OXIDASE/DEHYDROGENASE 4 (ZMCKO4)
TITLE 2 IN COMPLEX WITH PHENYLUREA INHIBITOR CPPU
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: CYTOKININ DEHYDROGENASE 4;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: UNP RESIDUES 22-541;
COMPND 5 EC: 1.5.99.12;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ZEA MAYS;
SOURCE 3 ORGANISM_COMMON: MAIZE;
SOURCE 4 ORGANISM_TAXID: 4577;
SOURCE 5 GENE: CKX4;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTYB12
KEYWDS CYTOKININ, FLAVOPROTEIN, PHENYL-UREA INHIBITOR, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR D.KOPECNY,S.MORERA,A.VIGOUROUX,R.KONCITIKOVA
REVDAT 5 20-NOV-24 4O95 1 REMARK
REVDAT 4 24-AUG-22 4O95 1 JRNL REMARK LINK
REVDAT 3 25-NOV-15 4O95 1 JRNL
REVDAT 2 04-NOV-15 4O95 1 JRNL
REVDAT 1 01-APR-15 4O95 0
JRNL AUTH D.KOPECNY,R.KONCITIKOVA,H.POPELKA,P.BRIOZZO,A.VIGOUROUX,
JRNL AUTH 2 M.KOPECNA,D.ZALABAK,M.SEBELA,J.SKOPALOVA,I.FREBORT,S.MORERA
JRNL TITL KINETIC AND STRUCTURAL INVESTIGATION OF THE CYTOKININ
JRNL TITL 2 OXIDASE/DEHYDROGENASE ACTIVE SITE.
JRNL REF FEBS J. V. 283 361 2016
JRNL REFN ISSN 1742-464X
JRNL PMID 26519657
JRNL DOI 10.1111/FEBS.13581
REMARK 2
REMARK 2 RESOLUTION. 1.75 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.10.0
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.67
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5
REMARK 3 NUMBER OF REFLECTIONS : 58603
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.188
REMARK 3 R VALUE (WORKING SET) : 0.187
REMARK 3 FREE R VALUE : 0.207
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 2931
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.79
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.52
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4292
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2388
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4077
REMARK 3 BIN R VALUE (WORKING SET) : 0.2370
REMARK 3 BIN FREE R VALUE : 0.2756
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.01
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 215
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3558
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 134
REMARK 3 SOLVENT ATOMS : 172
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 33.15
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.85
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -5.07200
REMARK 3 B22 (A**2) : -5.07200
REMARK 3 B33 (A**2) : 10.14390
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.272
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.099
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 3782 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 5111 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1252 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 71 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 610 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 3782 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 448 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 4439 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.00
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.71
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.18
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 1
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|38 - A|531 A|601 - A|602 A|603 - A|616 A|701 -
REMARK 3 A|872 }
REMARK 3 ORIGIN FOR THE GROUP (A): -27.0376 -3.9423 -21.5798
REMARK 3 T TENSOR
REMARK 3 T11: -0.0830 T22: -0.1677
REMARK 3 T33: -0.2388 T12: -0.0374
REMARK 3 T13: -0.0029 T23: 0.0117
REMARK 3 L TENSOR
REMARK 3 L11: 0.5989 L22: 0.7627
REMARK 3 L33: 3.7090 L12: -0.0676
REMARK 3 L13: 0.3927 L23: -0.5214
REMARK 3 S TENSOR
REMARK 3 S11: 0.0201 S12: 0.0354 S13: -0.0142
REMARK 3 S21: 0.0847 S22: -0.0712 S23: 0.0770
REMARK 3 S31: 0.0395 S32: -0.1654 S33: 0.0511
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4O95 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JAN-14.
REMARK 100 THE DEPOSITION ID IS D_1000084198.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 08-NOV-13
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 8.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SOLEIL
REMARK 200 BEAMLINE : PROXIMA 1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934
REMARK 200 MONOCHROMATOR : SI111
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XDS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58646
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.07100
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.1400
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86
REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 50.39
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 22% ETHYLENE GLYCOL, CO-CRYSTALLIZED
REMARK 280 WITH 3MM CPPU IN DMSO, PH 8.0, VAPOR DIFFUSION, HANGING DROP,
REMARK 280 TEMPERATURE 298.0K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4
REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4
REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4
REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.12500
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.22500
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.22500
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 156.18750
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.22500
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.22500
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.06250
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.22500
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.22500
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 156.18750
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.22500
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.22500
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 52.06250
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 104.12500
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 ALA A 18
REMARK 465 GLY A 19
REMARK 465 HIS A 20
REMARK 465 MET A 21
REMARK 465 LEU A 22
REMARK 465 PRO A 23
REMARK 465 VAL A 24
REMARK 465 GLU A 25
REMARK 465 PRO A 26
REMARK 465 PRO A 27
REMARK 465 ALA A 28
REMARK 465 GLU A 29
REMARK 465 LEU A 30
REMARK 465 LEU A 31
REMARK 465 GLN A 32
REMARK 465 LEU A 33
REMARK 465 GLY A 34
REMARK 465 GLY A 35
REMARK 465 GLY A 36
REMARK 465 ASP A 37
REMARK 465 GLU A 292
REMARK 465 GLY A 293
REMARK 465 LEU A 294
REMARK 465 ILE A 295
REMARK 465 ASN A 296
REMARK 465 ASN A 297
REMARK 465 TRP A 298
REMARK 465 ARG A 299
REMARK 465 SER A 300
REMARK 465 SER A 301
REMARK 465 PHE A 302
REMARK 465 PHE A 303
REMARK 465 SER A 304
REMARK 465 PRO A 305
REMARK 465 GLN A 306
REMARK 465 ASN A 307
REMARK 465 PRO A 308
REMARK 465 VAL A 309
REMARK 465 LYS A 310
REMARK 465 LEU A 311
REMARK 465 THR A 312
REMARK 465 SER A 313
REMARK 465 LEU A 314
REMARK 465 LYS A 315
REMARK 465 HIS A 316
REMARK 465 HIS A 317
REMARK 465 SER A 318
REMARK 465 PRO A 532
REMARK 465 GLY A 533
REMARK 465 SER A 534
REMARK 465 PRO A 535
REMARK 465 ALA A 536
REMARK 465 LEU A 537
REMARK 465 ALA A 538
REMARK 465 ALA A 539
REMARK 465 ASP A 540
REMARK 465 SER A 541
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ARG A 89 56.46 -109.55
REMARK 500 TYR A 173 52.86 -90.62
REMARK 500 ASN A 182 -75.12 -118.00
REMARK 500 ALA A 183 -48.68 -172.20
REMARK 500 SER A 186 -169.18 -160.98
REMARK 500 VAL A 406 -61.55 -106.41
REMARK 500 ALA A 416 -82.53 58.82
REMARK 500 LYS A 492 -35.25 63.96
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 601
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 245 A 602
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 603
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 604
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 605
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 606
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 607
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 608
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 609
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 610
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 611
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 612
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 613
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 614
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 615
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 616
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 2QKN RELATED DB: PDB
REMARK 900 THE SAME INHIBITOR IN COMPLEX WITH ZMCKO1
REMARK 900 RELATED ID: 3KJM RELATED DB: PDB
REMARK 900 THE SAME INHIBITOR IN COMPLEX WITH L492A MUTANT VARIANT OF ZMCKO1
REMARK 900 RELATED ID: 4OAL RELATED DB: PDB
REMARK 900 RELATED ID: 4MLA RELATED DB: PDB
REMARK 900 RELATED ID: 3S1C RELATED DB: PDB
REMARK 900 RELATED ID: 3S1E RELATED DB: PDB
REMARK 900 RELATED ID: 3S1F RELATED DB: PDB
REMARK 900 RELATED ID: 3S1D RELATED DB: PDB
REMARK 900 RELATED ID: 4ML8 RELATED DB: PDB
DBREF 4O95 A 22 541 UNP E3T1W8 E3T1W8_MAIZE 22 541
SEQRES 1 A 524 ALA GLY HIS MET LEU PRO VAL GLU PRO PRO ALA GLU LEU
SEQRES 2 A 524 LEU GLN LEU GLY GLY GLY ASP VAL GLY GLY GLY ARG LEU
SEQRES 3 A 524 SER VAL ASP ALA SER ASP ILE ALA GLU ALA SER ARG ASP
SEQRES 4 A 524 PHE GLY GLY VAL ALA ARG ALA GLU PRO MET ALA VAL PHE
SEQRES 5 A 524 HIS PRO ARG ALA ALA GLY ASP VAL ALA GLY LEU VAL GLY
SEQRES 6 A 524 ALA ALA PHE ARG SER ALA ARG GLY PHE ARG VAL SER ALA
SEQRES 7 A 524 ARG GLY HIS GLY HIS SER ILE SER GLY GLN ALA GLN ALA
SEQRES 8 A 524 ALA GLY GLY VAL VAL VAL ASP MET SER ARG GLY ARG GLY
SEQRES 9 A 524 PRO GLY ALA ALA VAL ALA ARG ALA LEU PRO VAL HIS SER
SEQRES 10 A 524 ALA ALA LEU GLY GLY HIS TYR VAL ASP VAL TRP GLY GLY
SEQRES 11 A 524 GLU LEU TRP VAL ASP VAL LEU ASN TRP THR LEU SER HIS
SEQRES 12 A 524 GLY GLY LEU ALA PRO ARG SER TRP THR ASP TYR LEU TYR
SEQRES 13 A 524 LEU SER VAL GLY GLY THR LEU SER ASN ALA GLY ILE SER
SEQRES 14 A 524 GLY GLN ALA PHE HIS HIS GLY PRO GLN ILE SER ASN VAL
SEQRES 15 A 524 TYR GLU LEU ASP VAL VAL THR GLY LYS GLY GLU VAL VAL
SEQRES 16 A 524 THR CYS SER GLU THR GLU ASN PRO ASP LEU PHE PHE GLY
SEQRES 17 A 524 VAL LEU GLY GLY LEU GLY GLN PHE GLY ILE ILE THR ARG
SEQRES 18 A 524 ALA ARG ILE ALA LEU GLU ARG ALA PRO LYS ARG VAL ARG
SEQRES 19 A 524 TRP ILE ARG ALA LEU TYR SER ASN PHE SER GLU PHE THR
SEQRES 20 A 524 ALA ASP GLN GLU ARG LEU ILE SER LEU GLY SER GLY GLY
SEQRES 21 A 524 GLY ARG ARG PHE ASP TYR VAL GLU GLY PHE VAL VAL ALA
SEQRES 22 A 524 ALA GLU GLY LEU ILE ASN ASN TRP ARG SER SER PHE PHE
SEQRES 23 A 524 SER PRO GLN ASN PRO VAL LYS LEU THR SER LEU LYS HIS
SEQRES 24 A 524 HIS SER SER VAL LEU TYR CYS LEU GLU VAL THR LYS ASN
SEQRES 25 A 524 TYR ASP ASP GLU THR ALA GLY SER VAL ASP GLN ASP VAL
SEQRES 26 A 524 ASP THR LEU LEU GLY GLU LEU ASN PHE LEU PRO GLY THR
SEQRES 27 A 524 VAL PHE THR THR ASP LEU PRO TYR VAL ASP PHE LEU ASP
SEQRES 28 A 524 ARG VAL HIS LYS ALA GLU LEU LYS LEU ARG ALA LYS GLY
SEQRES 29 A 524 MET TRP GLU VAL PRO HIS PRO TRP LEU ASN LEU PHE VAL
SEQRES 30 A 524 PRO ALA SER ARG ILE ALA ASP PHE ASP ARG GLY VAL PHE
SEQRES 31 A 524 ARG GLY VAL LEU GLY GLY ARG THR ALA GLY ALA GLY GLY
SEQRES 32 A 524 PRO VAL LEU ILE TYR PRO MET ASN LYS HIS LYS TRP ASP
SEQRES 33 A 524 PRO ARG SER SER ALA VAL THR PRO ASP GLU GLU VAL PHE
SEQRES 34 A 524 TYR LEU VAL ALA PHE LEU ARG SER ALA LEU PRO GLY ALA
SEQRES 35 A 524 PRO GLU SER LEU GLU ALA LEU ALA ARG GLN ASN GLN ARG
SEQRES 36 A 524 ILE LEU ASP PHE CYS ALA GLY THR GLY ILE GLY ALA LYS
SEQRES 37 A 524 GLN TYR LEU PRO GLY HIS LYS ALA ARG HIS GLU TRP ALA
SEQRES 38 A 524 GLU HIS PHE GLY ALA ALA ARG TRP ASP ARG PHE ALA ARG
SEQRES 39 A 524 LEU LYS ALA GLU PHE ASP PRO ARG ALA ILE LEU ALA ALA
SEQRES 40 A 524 GLY GLN GLY ILE PHE ARG PRO PRO GLY SER PRO ALA LEU
SEQRES 41 A 524 ALA ALA ASP SER
HET FAD A 601 53
HET 245 A 602 17
HET EDO A 603 4
HET EDO A 604 4
HET EDO A 605 4
HET EDO A 606 4
HET EDO A 607 4
HET EDO A 608 4
HET EDO A 609 4
HET EDO A 610 4
HET EDO A 611 4
HET EDO A 612 4
HET DMS A 613 4
HET PEG A 614 7
HET PEG A 615 7
HET GOL A 616 6
HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE
HETNAM 245 1-(2-CHLOROPYRIDIN-4-YL)-3-PHENYLUREA
HETNAM EDO 1,2-ETHANEDIOL
HETNAM DMS DIMETHYL SULFOXIDE
HETNAM PEG DI(HYDROXYETHYL)ETHER
HETNAM GOL GLYCEROL
HETSYN EDO ETHYLENE GLYCOL
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 2 FAD C27 H33 N9 O15 P2
FORMUL 3 245 C12 H10 CL N3 O
FORMUL 4 EDO 10(C2 H6 O2)
FORMUL 14 DMS C2 H6 O S
FORMUL 15 PEG 2(C4 H10 O3)
FORMUL 17 GOL C3 H8 O3
FORMUL 18 HOH *172(H2 O)
HELIX 1 1 ASP A 46 SER A 54 1 9
HELIX 2 2 ALA A 73 SER A 87 1 15
HELIX 3 3 GLY A 121 ARG A 128 1 8
HELIX 4 4 LEU A 149 HIS A 160 1 12
HELIX 5 5 SER A 175 SER A 181 1 7
HELIX 6 6 GLN A 188 GLY A 193 1 6
HELIX 7 7 PRO A 194 SER A 197 5 4
HELIX 8 8 ASN A 219 LEU A 227 1 9
HELIX 9 9 ASN A 259 SER A 272 1 14
HELIX 10 10 LEU A 273 GLY A 278 5 6
HELIX 11 11 SER A 337 GLU A 348 1 12
HELIX 12 12 TYR A 363 ASP A 368 1 6
HELIX 13 13 ASP A 368 LYS A 380 1 13
HELIX 14 14 ARG A 398 VAL A 406 1 9
HELIX 15 15 HIS A 430 TRP A 432 5 3
HELIX 16 16 ALA A 459 THR A 480 1 22
HELIX 17 17 ALA A 493 GLY A 502 1 10
HELIX 18 18 GLY A 502 ASP A 517 1 16
HELIX 19 19 ALA A 523 GLY A 527 5 5
SHEET 1 A 4 ARG A 42 SER A 44 0
SHEET 2 A 4 ALA A 67 HIS A 70 -1 O VAL A 68 N SER A 44
SHEET 3 A 4 VAL A 112 ASP A 115 1 O VAL A 113 N PHE A 69
SHEET 4 A 4 VAL A 93 ARG A 96 1 N SER A 94 O VAL A 114
SHEET 1 B 4 VAL A 132 SER A 134 0
SHEET 2 B 4 GLY A 139 TRP A 145 -1 O TYR A 141 N VAL A 132
SHEET 3 B 4 GLY A 234 ARG A 245 -1 O ALA A 239 N VAL A 144
SHEET 4 B 4 LEU A 163 PRO A 165 -1 N ALA A 164 O GLU A 244
SHEET 1 C 5 VAL A 132 SER A 134 0
SHEET 2 C 5 GLY A 139 TRP A 145 -1 O TYR A 141 N VAL A 132
SHEET 3 C 5 GLY A 234 ARG A 245 -1 O ALA A 239 N VAL A 144
SHEET 4 C 5 VAL A 199 THR A 206 -1 N TYR A 200 O ARG A 240
SHEET 5 C 5 VAL A 211 SER A 215 -1 O CYS A 214 N LEU A 202
SHEET 1 D 4 TYR A 283 VAL A 289 0
SHEET 2 D 4 LEU A 321 TYR A 330 -1 O GLU A 325 N GLU A 285
SHEET 3 D 4 ARG A 249 TYR A 257 -1 N ILE A 253 O VAL A 326
SHEET 4 D 4 PHE A 357 PRO A 362 -1 O THR A 359 N TRP A 252
SHEET 1 E 4 VAL A 422 ASN A 428 0
SHEET 2 E 4 VAL A 445 PHE A 451 -1 O LEU A 448 N TYR A 425
SHEET 3 E 4 LEU A 390 PRO A 395 -1 N LEU A 390 O PHE A 451
SHEET 4 E 4 LYS A 485 TYR A 487 -1 O LYS A 485 N PHE A 393
LINK ND1 HIS A 100 C8M FAD A 601 1555 1555 1.45
CISPEP 1 THR A 415 ALA A 416 0 1.70
SITE 1 AC1 33 PHE A 57 ALA A 95 ARG A 96 GLY A 97
SITE 2 AC1 33 HIS A 98 GLY A 99 HIS A 100 SER A 101
SITE 3 AC1 33 GLN A 105 ALA A 106 THR A 169 ASP A 170
SITE 4 AC1 33 TYR A 171 LEU A 174 SER A 175 GLY A 177
SITE 5 AC1 33 GLY A 178 SER A 181 ASN A 182 GLY A 184
SITE 6 AC1 33 ILE A 185 GLY A 234 ILE A 235 ILE A 236
SITE 7 AC1 33 TRP A 389 TYR A 487 LEU A 488 GLN A 526
SITE 8 AC1 33 245 A 602 HOH A 718 HOH A 719 HOH A 746
SITE 9 AC1 33 HOH A 864
SITE 1 AC2 10 ASP A 170 VAL A 370 TRP A 389 ASN A 391
SITE 2 AC2 10 LEU A 423 LEU A 452 TYR A 487 LEU A 488
SITE 3 AC2 10 FAD A 601 EDO A 610
SITE 1 AC3 4 HIS A 98 TYR A 171 HIS A 371 GLU A 374
SITE 1 AC4 4 GLY A 139 HIS A 140 LEU A 243 ARG A 245
SITE 1 AC5 7 PHE A 224 ARG A 435 SER A 436 SER A 437
SITE 2 AC5 7 ARG A 505 ARG A 508 HOH A 716
SITE 1 AC6 6 PHE A 190 HIS A 191 ILE A 271 LEU A 273
SITE 2 AC6 6 ASN A 428 HIS A 430
SITE 1 AC7 4 SER A 159 SER A 397 ARG A 398 GLY A 481
SITE 1 AC8 3 ALA A 510 ALA A 514 PRO A 518
SITE 1 AC9 3 ARG A 166 SER A 197 TYR A 200
SITE 1 BC1 6 HIS A 387 TRP A 389 LEU A 452 ARG A 453
SITE 2 BC1 6 SER A 454 245 A 602
SITE 1 BC2 3 HIS A 192 SER A 197 LYS A 431
SITE 1 BC3 3 ALA A 129 LEU A 130 VAL A 132
SITE 1 BC4 4 TRP A 432 ALA A 438 THR A 440 HOH A 783
SITE 1 BC5 4 ASP A 152 ASN A 155 TYR A 173 GLU A 444
SITE 1 BC6 5 LEU A 474 ALA A 484 GLN A 486 HIS A 491
SITE 2 BC6 5 GLU A 496
SITE 1 BC7 6 TYR A 200 GLU A 201 THR A 217 ARG A 240
SITE 2 BC7 6 GLU A 461 HOH A 776
CRYST1 74.450 74.450 208.250 90.00 90.00 90.00 P 43 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.013432 0.000000 0.000000 0.00000
SCALE2 0.000000 0.013432 0.000000 0.00000
SCALE3 0.000000 0.000000 0.004802 0.00000