HEADER TRANSFERASE 03-JAN-14 4OAC OBSLTE 31-AUG-16 4OAC 5LPB TITLE CRYSTAL STRUCTURE OF THE BRI1 KINASE DOMAIN (865-1160) IN COMPLEX WITH TITLE 2 ADP FROM ARABIDOPSIS THALIANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN BRASSINOSTEROID INSENSITIVE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 865-1160; COMPND 5 SYNONYM: ATBRI1, BRASSINOSTEROID LRR RECEPTOR KINASE; COMPND 6 EC: 2.7.10.1, 2.7.11.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS,THALE-CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 STRAIN: COL-0; SOURCE 6 GENE: AT4G39400, BRI1, F23K16.30; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMH-HT KEYWDS KINASE, PHOSPHOTRANSFERASE, ATP BINDING, PROTEIN BINDING, KEYWDS 2 PHOSPHORYLATION, MEMBRANE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.BOJAR,J.MARTINEZ,J.SANTIAGO,V.RYBIN,R.BAYLISS,M.HOTHORN REVDAT 4 31-AUG-16 4OAC 1 OBSLTE REVDAT 3 09-APR-14 4OAC 1 JRNL REVDAT 2 26-FEB-14 4OAC 1 JRNL REVDAT 1 05-FEB-14 4OAC 0 JRNL AUTH D.BOJAR,J.MARTINEZ,J.SANTIAGO,V.RYBIN,R.BAYLISS,M.HOTHORN JRNL TITL CRYSTAL STRUCTURES OF THE PHOSPHORYLATED BRI1 KINASE DOMAIN JRNL TITL 2 AND IMPLICATIONS FOR BRASSINOSTEROID SIGNAL INITIATION. JRNL REF PLANT J. V. 78 31 2014 JRNL REFN ISSN 0960-7412 JRNL PMID 24461462 JRNL DOI 10.1111/TPJ.12445 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 25527 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : SAME SET AS FOR RELATED PDB REMARK 3 4OA2 EXTENDED TO THE REMARK 3 CORRESPONDING RESOLUTION REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1387 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1884 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.4120 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.3620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2171 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 23 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.50000 REMARK 3 B22 (A**2) : -0.50000 REMARK 3 B33 (A**2) : 1.61000 REMARK 3 B12 (A**2) : -0.25000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.150 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.143 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.767 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2250 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2153 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3047 ; 2.026 ; 2.002 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4945 ; 0.894 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 283 ; 6.868 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 88 ;34.177 ;23.182 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 383 ;15.331 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;24.489 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2486 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 496 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1132 ; 3.788 ; 4.212 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1131 ; 3.774 ; 4.212 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1412 ; 4.803 ; 6.293 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1413 ; 4.802 ; 6.293 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1118 ; 5.682 ; 4.688 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1118 ; 5.680 ; 4.688 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1635 ; 8.379 ; 6.910 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 9531 ;13.386 ;40.609 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 9527 ;13.388 ;40.607 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 866 A 969 REMARK 3 ORIGIN FOR THE GROUP (A): 30.7213 35.4363 17.2323 REMARK 3 T TENSOR REMARK 3 T11: 0.0647 T22: 0.1038 REMARK 3 T33: 0.3382 T12: 0.0657 REMARK 3 T13: 0.0047 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 3.6767 L22: 6.2161 REMARK 3 L33: 5.4091 L12: -1.9554 REMARK 3 L13: -2.4347 L23: 1.9371 REMARK 3 S TENSOR REMARK 3 S11: 0.2108 S12: -0.0727 S13: 0.3923 REMARK 3 S21: -0.2863 S22: -0.1287 S23: -0.1220 REMARK 3 S31: -0.0960 S32: 0.1416 S33: -0.0821 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 970 A 1083 REMARK 3 ORIGIN FOR THE GROUP (A): 42.2432 20.2333 15.0995 REMARK 3 T TENSOR REMARK 3 T11: 0.1339 T22: 0.0335 REMARK 3 T33: 0.1941 T12: 0.0560 REMARK 3 T13: -0.0247 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 6.9203 L22: 4.9689 REMARK 3 L33: 4.5277 L12: 0.1920 REMARK 3 L13: -1.4660 L23: 0.1045 REMARK 3 S TENSOR REMARK 3 S11: -0.0967 S12: -0.2729 S13: -0.1509 REMARK 3 S21: 0.2690 S22: 0.1428 S23: -0.1642 REMARK 3 S31: -0.0112 S32: 0.1307 S33: -0.0461 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1084 A 1112 REMARK 3 ORIGIN FOR THE GROUP (A): 55.5849 16.1372 27.0357 REMARK 3 T TENSOR REMARK 3 T11: 0.7507 T22: 0.6513 REMARK 3 T33: 0.6086 T12: 0.0248 REMARK 3 T13: -0.1013 T23: 0.0599 REMARK 3 L TENSOR REMARK 3 L11: 14.1697 L22: 6.1660 REMARK 3 L33: 4.5549 L12: -2.9864 REMARK 3 L13: 1.1234 L23: 4.7046 REMARK 3 S TENSOR REMARK 3 S11: -0.4274 S12: -0.7361 S13: -0.5826 REMARK 3 S21: 0.7433 S22: 0.5505 S23: 0.0146 REMARK 3 S31: 0.3576 S32: 0.2941 S33: -0.1231 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1113 A 1160 REMARK 3 ORIGIN FOR THE GROUP (A): 45.7254 6.4190 20.4902 REMARK 3 T TENSOR REMARK 3 T11: 0.3680 T22: 0.2191 REMARK 3 T33: 0.5651 T12: 0.1450 REMARK 3 T13: 0.0143 T23: 0.1216 REMARK 3 L TENSOR REMARK 3 L11: 4.5169 L22: 3.6241 REMARK 3 L33: 6.9395 L12: 1.8292 REMARK 3 L13: -1.2058 L23: 0.0946 REMARK 3 S TENSOR REMARK 3 S11: -0.1812 S12: -0.9037 S13: -0.8304 REMARK 3 S21: 0.7571 S22: -0.1085 S23: -0.2176 REMARK 3 S31: 0.8376 S32: 0.3719 S33: 0.2897 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4OAC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JAN-14. REMARK 100 THE RCSB ID CODE IS RCSB084241. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26940 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 44.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03600 REMARK 200 FOR THE DATA SET : 24.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 10.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.14600 REMARK 200 FOR SHELL : 1.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: - REMARK 200 SOFTWARE USED: - REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG 20K/MME 550 MORPHEUS MIX REMARK 280 0.12 M ETH GLYCOL MIX 0.1 M HEPES PH 7 1MM ADP, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.16200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 16.58100 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.16200 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 16.58100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 862 REMARK 465 ALA A 863 REMARK 465 MET A 864 REMARK 465 GLU A 865 REMARK 465 PRO A 1089 REMARK 465 ASP A 1090 REMARK 465 PHE A 1091 REMARK 465 GLY A 1092 REMARK 465 ASP A 1093 REMARK 465 ASN A 1094 REMARK 465 ASN A 1095 REMARK 465 LEU A 1096 REMARK 465 VAL A 1097 REMARK 465 GLY A 1098 REMARK 465 TRP A 1099 REMARK 465 VAL A 1100 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 866 CG CD CE NZ REMARK 470 GLN A 919 CG CD OE1 NE2 REMARK 470 LYS A 947 CG CD CE NZ REMARK 470 ASP A 950 CG OD1 OD2 REMARK 470 ASP A 970 CG OD1 OD2 REMARK 470 LYS A 972 CG CD CE NZ REMARK 470 LYS A 973 CG CD CE NZ REMARK 470 VAL A 976 CG1 CG2 REMARK 470 LYS A 977 CG CD CE NZ REMARK 470 HIS A1103 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A1107 CG CD NE CZ NH1 NH2 REMARK 470 ILE A1108 CB CG1 CG2 CD1 REMARK 470 ASP A1110 CG OD1 OD2 REMARK 470 PHE A1112 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A1115 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 904 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A1008 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ASP A1009 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 930 -82.66 -115.96 REMARK 500 ASP A1009 45.16 -150.60 REMARK 500 ASP A1027 79.45 65.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OA2 RELATED DB: PDB REMARK 900 BRI1 KINASE DOMAIN (865-1196) IN COMPLEX WITH ADP REMARK 900 RELATED ID: 4OA6 RELATED DB: PDB REMARK 900 BRI1 KINASE DOMAIN (865-1160) IN ITS APO FORM REMARK 900 RELATED ID: 4OA9 RELATED DB: PDB REMARK 900 BRI1 KINASE DOMAIN (865-1160) IN COMPLEX WITH AMPPNP AND MN REMARK 900 RELATED ID: 4OAB RELATED DB: PDB REMARK 900 BRI1 KINASE DOMAIN (865-1160) IN COMPLEX WITH ATP DBREF 4OAC A 865 1160 UNP O22476 BRI1_ARATH 865 1160 SEQADV 4OAC GLY A 862 UNP O22476 EXPRESSION TAG SEQADV 4OAC ALA A 863 UNP O22476 EXPRESSION TAG SEQADV 4OAC MET A 864 UNP O22476 EXPRESSION TAG SEQADV 4OAC ALA A 872 UNP O22476 THR 872 ENGINEERED MUTATION SEQRES 1 A 299 GLY ALA MET GLU LYS PRO LEU ARG LYS LEU ALA PHE ALA SEQRES 2 A 299 ASP LEU LEU GLN ALA THR ASN GLY PHE HIS ASN ASP SER SEQRES 3 A 299 LEU ILE GLY SER GLY GLY PHE GLY ASP VAL TYR LYS ALA SEQRES 4 A 299 ILE LEU LYS ASP GLY SER ALA VAL ALA ILE LYS LYS LEU SEQRES 5 A 299 ILE HIS VAL SER GLY GLN GLY ASP ARG GLU PHE MET ALA SEQRES 6 A 299 GLU MET GLU THR ILE GLY LYS ILE LYS HIS ARG ASN LEU SEQRES 7 A 299 VAL PRO LEU LEU GLY TYR CYS LYS VAL GLY ASP GLU ARG SEQRES 8 A 299 LEU LEU VAL TYR GLU PHE MET LYS TYR GLY SER LEU GLU SEQRES 9 A 299 ASP VAL LEU HIS ASP PRO LYS LYS ALA GLY VAL LYS LEU SEQRES 10 A 299 ASN TRP SER THR ARG ARG LYS ILE ALA ILE GLY SER ALA SEQRES 11 A 299 ARG GLY LEU ALA PHE LEU HIS HIS ASN CYS SER PRO HIS SEQRES 12 A 299 ILE ILE HIS ARG ASP MET LYS SER SER ASN VAL LEU LEU SEQRES 13 A 299 ASP GLU ASN LEU GLU ALA ARG VAL SER ASP PHE GLY MET SEQRES 14 A 299 ALA ARG LEU MET SER ALA MET ASP TPO HIS LEU SEP VAL SEQRES 15 A 299 SEP THR LEU ALA GLY THR PRO GLY TYR VAL PRO PRO GLU SEQRES 16 A 299 TYR TYR GLN SER PHE ARG CYS SER THR LYS GLY ASP VAL SEQRES 17 A 299 TYR SER TYR GLY VAL VAL LEU LEU GLU LEU LEU THR GLY SEQRES 18 A 299 LYS ARG PRO THR ASP SER PRO ASP PHE GLY ASP ASN ASN SEQRES 19 A 299 LEU VAL GLY TRP VAL LYS GLN HIS ALA LYS LEU ARG ILE SEQRES 20 A 299 SER ASP VAL PHE ASP PRO GLU LEU MET LYS GLU ASP PRO SEQRES 21 A 299 ALA LEU GLU ILE GLU LEU LEU GLN HIS LEU LYS VAL ALA SEQRES 22 A 299 VAL ALA CYS LEU ASP ASP ARG ALA TRP ARG ARG PRO THR SEQRES 23 A 299 MET VAL GLN VAL MET ALA MET PHE LYS GLU ILE GLN ALA MODRES 4OAC TPO A 1039 THR PHOSPHOTHREONINE MODRES 4OAC SEP A 1042 SER PHOSPHOSERINE MODRES 4OAC SEP A 1044 SER PHOSPHOSERINE HET TPO A1039 11 HET SEP A1042 10 HET SEP A1044 10 HET ADP A1201 27 HET EDO A1202 4 HETNAM TPO PHOSPHOTHREONINE HETNAM SEP PHOSPHOSERINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN TPO PHOSPHONOTHREONINE HETSYN SEP PHOSPHONOSERINE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 TPO C4 H10 N O6 P FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *23(H2 O) HELIX 1 1 ALA A 872 THR A 880 1 9 HELIX 2 2 HIS A 884 ASP A 886 5 3 HELIX 3 3 GLY A 918 THR A 930 1 13 HELIX 4 4 ILE A 931 ILE A 934 5 4 HELIX 5 5 SER A 963 HIS A 969 1 7 HELIX 6 6 ASP A 970 ALA A 974 5 5 HELIX 7 7 ASN A 979 ASN A 1000 1 22 HELIX 8 8 LYS A 1011 SER A 1013 5 3 HELIX 9 9 PRO A 1054 GLN A 1059 5 6 HELIX 10 10 SER A 1064 GLY A 1082 1 19 HELIX 11 11 GLN A 1102 SER A 1109 1 8 HELIX 12 12 ASP A 1110 MET A 1117 5 8 HELIX 13 13 ILE A 1125 LEU A 1138 1 14 HELIX 14 14 ARG A 1141 ARG A 1145 5 5 HELIX 15 15 THR A 1147 ALA A 1160 1 14 SHEET 1 A 6 ARG A 869 LYS A 870 0 SHEET 2 A 6 LEU A 942 VAL A 948 1 O LEU A 943 N ARG A 869 SHEET 3 A 6 GLU A 951 GLU A 957 -1 O GLU A 951 N VAL A 948 SHEET 4 A 6 ALA A 907 LEU A 913 -1 N LEU A 913 O ARG A 952 SHEET 5 A 6 GLY A 895 ILE A 901 -1 N TYR A 898 O ILE A 910 SHEET 6 A 6 LEU A 888 GLY A 892 -1 N ILE A 889 O VAL A 897 SHEET 1 B 2 HIS A1004 ILE A1006 0 SHEET 2 B 2 ARG A1032 MET A1034 -1 O MET A1034 N HIS A1004 SHEET 1 C 2 VAL A1015 LEU A1017 0 SHEET 2 C 2 ALA A1023 VAL A1025 -1 O ARG A1024 N LEU A1016 SHEET 1 D 2 LEU A1041 SEP A1042 0 SHEET 2 D 2 ARG A1062 CYS A1063 -1 O CYS A1063 N LEU A1041 LINK C ASP A1038 N TPO A1039 1555 1555 1.32 LINK C TPO A1039 N HIS A1040 1555 1555 1.33 LINK C LEU A1041 N SEP A1042 1555 1555 1.32 LINK C SEP A1042 N VAL A1043 1555 1555 1.31 LINK C VAL A1043 N SEP A1044 1555 1555 1.34 LINK C SEP A1044 N THR A1045 1555 1555 1.34 CISPEP 1 SER A 1002 PRO A 1003 0 2.75 SITE 1 AC1 14 PHE A 894 VAL A 897 ALA A 909 LYS A 911 SITE 2 AC1 14 GLU A 957 PHE A 958 MET A 959 SER A 963 SITE 3 AC1 14 ASP A 966 SER A1013 ASN A1014 LEU A1016 SITE 4 AC1 14 ASP A1027 HOH A1316 SITE 1 AC2 7 ARG A1008 VAL A1043 THR A1045 ALA A1047 SITE 2 AC2 7 TYR A1057 SER A1060 ARG A1062 CRYST1 116.141 116.141 49.743 90.00 90.00 120.00 P 62 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008610 0.004971 0.000000 0.00000 SCALE2 0.000000 0.009942 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020103 0.00000