data_4ODP # _entry.id 4ODP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4ODP pdb_00004odp 10.2210/pdb4odp/pdb RCSB RCSB084362 ? ? WWPDB D_1000084362 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-01-14 2 'Structure model' 1 1 2017-07-26 3 'Structure model' 1 2 2017-10-04 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 2 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' entity_src_gen 2 2 'Structure model' software 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_struct_conn_angle 9 4 'Structure model' struct_conn 10 4 'Structure model' struct_ref_seq_dif 11 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 3 'Structure model' '_citation.country' 3 3 'Structure model' '_citation.journal_abbrev' 4 3 'Structure model' '_citation.journal_id_CSD' 5 3 'Structure model' '_citation.journal_id_ISSN' 6 3 'Structure model' '_citation.journal_volume' 7 3 'Structure model' '_citation.page_first' 8 3 'Structure model' '_citation.page_last' 9 3 'Structure model' '_citation.pdbx_database_id_DOI' 10 3 'Structure model' '_citation.pdbx_database_id_PubMed' 11 3 'Structure model' '_citation.title' 12 3 'Structure model' '_citation.year' 13 4 'Structure model' '_database_2.pdbx_DOI' 14 4 'Structure model' '_database_2.pdbx_database_accession' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 31 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 33 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 34 4 'Structure model' '_pdbx_struct_conn_angle.value' 35 4 'Structure model' '_struct_conn.pdbx_dist_value' 36 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 37 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 38 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 39 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 40 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 41 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 42 4 'Structure model' '_struct_conn.ptnr1_symmetry' 43 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 44 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 45 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 46 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 47 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 48 4 'Structure model' '_struct_ref_seq_dif.details' 49 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 50 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 51 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4ODP _pdbx_database_status.recvd_initial_deposition_date 2014-01-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4ODK . unspecified PDB 4ODL . unspecified PDB 4ODM . unspecified PDB 4ODN . unspecified PDB 4ODO . unspecified PDB 4ODQ . unspecified PDB 4ODR . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Quistgaard, E.M.' 1 'Low, C.' 2 'Nordlund, P.' 3 # _citation.id primary _citation.title 'Molecular insights into substrate recognition and catalytic mechanism of the chaperone and FKBP peptidyl-prolyl isomerase SlyD.' _citation.journal_abbrev 'BMC Biol.' _citation.journal_volume 14 _citation.page_first 82 _citation.page_last 82 _citation.year 2016 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1741-7007 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27664121 _citation.pdbx_database_id_DOI 10.1186/s12915-016-0300-3 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Quistgaard, E.M.' 1 ? primary 'Weininger, U.' 2 ? primary 'Ural-Blimke, Y.' 3 ? primary 'Modig, K.' 4 ? primary 'Nordlund, P.' 5 ? primary 'Akke, M.' 6 ? primary 'Low, C.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptidyl-prolyl cis-trans isomerase SlyD, Peptidyl-prolyl cis-trans isomerase FKBP1A chimera' 12179.549 1 5.2.1.8 ? 'SEE REMARK 999' ? 2 polymer syn '30S ribosomal protein S2' 1742.095 1 ? W23A 'S2-W23 peptide (UNP residues 20-34)' ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 4 ? ? ? ? 5 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 6 water nat water 18.015 101 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;TtSlyD, PPIase FKBP1A, 12 kDa FK506-binding protein, 12 kDa FKBP, FKBP-12, Calstabin-1, FK506-binding protein 1A, FKBP-1A, Immunophilin FKBP12, Rotamase ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKVGQDKVVTIRYTLQVEGEVLDQGELSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGATGHPGIIPPHATLDF QVEVVKVREATPEELLHGHAHPSGHHHHHH ; ;MKVGQDKVVTIRYTLQVEGEVLDQGELSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGATGHPGIIPPHATLDF QVEVVKVREATPEELLHGHAHPSGHHHHHH ; A ? 2 'polypeptide(L)' no yes 'TRYANPKMKPFIFGA(NH2)' TRYANPKMKPFIFGAX B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CHLORIDE ION' CL 4 'CALCIUM ION' CA 5 'NICKEL (II) ION' NI 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 VAL n 1 4 GLY n 1 5 GLN n 1 6 ASP n 1 7 LYS n 1 8 VAL n 1 9 VAL n 1 10 THR n 1 11 ILE n 1 12 ARG n 1 13 TYR n 1 14 THR n 1 15 LEU n 1 16 GLN n 1 17 VAL n 1 18 GLU n 1 19 GLY n 1 20 GLU n 1 21 VAL n 1 22 LEU n 1 23 ASP n 1 24 GLN n 1 25 GLY n 1 26 GLU n 1 27 LEU n 1 28 SER n 1 29 TYR n 1 30 LEU n 1 31 HIS n 1 32 GLY n 1 33 HIS n 1 34 ARG n 1 35 ASN n 1 36 LEU n 1 37 ILE n 1 38 PRO n 1 39 GLY n 1 40 LEU n 1 41 GLU n 1 42 GLU n 1 43 ALA n 1 44 LEU n 1 45 GLU n 1 46 GLY n 1 47 ARG n 1 48 GLU n 1 49 GLU n 1 50 GLY n 1 51 GLU n 1 52 ALA n 1 53 PHE n 1 54 GLN n 1 55 ALA n 1 56 HIS n 1 57 VAL n 1 58 PRO n 1 59 ALA n 1 60 GLU n 1 61 LYS n 1 62 ALA n 1 63 TYR n 1 64 GLY n 1 65 ALA n 1 66 THR n 1 67 GLY n 1 68 HIS n 1 69 PRO n 1 70 GLY n 1 71 ILE n 1 72 ILE n 1 73 PRO n 1 74 PRO n 1 75 HIS n 1 76 ALA n 1 77 THR n 1 78 LEU n 1 79 ASP n 1 80 PHE n 1 81 GLN n 1 82 VAL n 1 83 GLU n 1 84 VAL n 1 85 VAL n 1 86 LYS n 1 87 VAL n 1 88 ARG n 1 89 GLU n 1 90 ALA n 1 91 THR n 1 92 PRO n 1 93 GLU n 1 94 GLU n 1 95 LEU n 1 96 LEU n 1 97 HIS n 1 98 GLY n 1 99 HIS n 1 100 ALA n 1 101 HIS n 1 102 PRO n 1 103 SER n 1 104 GLY n 1 105 HIS n 1 106 HIS n 1 107 HIS n 1 108 HIS n 1 109 HIS n 1 110 HIS n 2 1 THR n 2 2 ARG n 2 3 TYR n 2 4 ALA n 2 5 ASN n 2 6 PRO n 2 7 LYS n 2 8 MET n 2 9 LYS n 2 10 PRO n 2 11 PHE n 2 12 ILE n 2 13 PHE n 2 14 GLY n 2 15 ALA n 2 16 NH2 n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 1 64 'bacteria, human' ? 'TTHA0346, FKBP1, FKBP12, FKBP1A' ? ? ? ? ? ? 'Thermus thermophilus' 274 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 3 sample ? 78 101 'bacteria, human' ? 'TTHA0346, FKBP1, FKBP12, FKBP1A' ? ? ? ? ? ? 'Thermus thermophilus' 274 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample ? 65 77 'bacteria, human' ? 'TTHA0346, FKBP1, FKBP12, FKBP1A' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Escherichia coli' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 83333 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 TYR 29 29 29 TYR TYR A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 HIS 33 33 33 HIS HIS A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 HIS 56 56 56 HIS HIS A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 TYR 63 63 ? ? ? A . n A 1 64 GLY 64 64 ? ? ? A . n A 1 65 ALA 65 65 ? ? ? A . n A 1 66 THR 66 66 ? ? ? A . n A 1 67 GLY 67 67 ? ? ? A . n A 1 68 HIS 68 68 ? ? ? A . n A 1 69 PRO 69 69 ? ? ? A . n A 1 70 GLY 70 70 ? ? ? A . n A 1 71 ILE 71 71 ? ? ? A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 HIS 75 75 75 HIS HIS A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 HIS 97 97 97 HIS HIS A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 HIS 99 99 99 HIS HIS A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 HIS 106 106 106 HIS HIS A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 HIS 108 108 108 HIS HIS A . n A 1 109 HIS 109 109 109 HIS HIS A . n A 1 110 HIS 110 110 110 HIS HIS A . n B 2 1 THR 1 20 ? ? ? B . n B 2 2 ARG 2 21 ? ? ? B . n B 2 3 TYR 3 22 ? ? ? B . n B 2 4 ALA 4 23 ? ? ? B . n B 2 5 ASN 5 24 ? ? ? B . n B 2 6 PRO 6 25 ? ? ? B . n B 2 7 LYS 7 26 ? ? ? B . n B 2 8 MET 8 27 27 MET MET B . n B 2 9 LYS 9 28 28 LYS LYS B . n B 2 10 PRO 10 29 29 PRO PRO B . n B 2 11 PHE 11 30 30 PHE PHE B . n B 2 12 ILE 12 31 31 ILE ILE B . n B 2 13 PHE 13 32 ? ? ? B . n B 2 14 GLY 14 33 ? ? ? B . n B 2 15 ALA 15 34 ? ? ? B . n B 2 16 NH2 16 35 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL 1 201 1 CL CL A . D 4 CA 1 202 2 CA CA A . E 4 CA 1 203 3 CA CA A . F 4 CA 1 204 4 CA CA A . G 4 CA 1 205 5 CA CA A . H 5 NI 1 206 6 NI NI A . I 6 HOH 1 301 1 HOH HOH A . I 6 HOH 2 302 2 HOH HOH A . I 6 HOH 3 303 3 HOH HOH A . I 6 HOH 4 304 4 HOH HOH A . I 6 HOH 5 305 5 HOH HOH A . I 6 HOH 6 306 6 HOH HOH A . I 6 HOH 7 307 7 HOH HOH A . I 6 HOH 8 308 8 HOH HOH A . I 6 HOH 9 309 9 HOH HOH A . I 6 HOH 10 310 10 HOH HOH A . I 6 HOH 11 311 11 HOH HOH A . I 6 HOH 12 312 12 HOH HOH A . I 6 HOH 13 313 13 HOH HOH A . I 6 HOH 14 314 14 HOH HOH A . I 6 HOH 15 315 15 HOH HOH A . I 6 HOH 16 316 16 HOH HOH A . I 6 HOH 17 317 17 HOH HOH A . I 6 HOH 18 318 18 HOH HOH A . I 6 HOH 19 319 19 HOH HOH A . I 6 HOH 20 320 20 HOH HOH A . I 6 HOH 21 321 21 HOH HOH A . I 6 HOH 22 322 22 HOH HOH A . I 6 HOH 23 323 23 HOH HOH A . I 6 HOH 24 324 24 HOH HOH A . I 6 HOH 25 325 25 HOH HOH A . I 6 HOH 26 326 26 HOH HOH A . I 6 HOH 27 327 27 HOH HOH A . I 6 HOH 28 328 28 HOH HOH A . I 6 HOH 29 329 29 HOH HOH A . I 6 HOH 30 330 30 HOH HOH A . I 6 HOH 31 331 31 HOH HOH A . I 6 HOH 32 332 32 HOH HOH A . I 6 HOH 33 333 33 HOH HOH A . I 6 HOH 34 334 34 HOH HOH A . I 6 HOH 35 335 35 HOH HOH A . I 6 HOH 36 336 36 HOH HOH A . I 6 HOH 37 337 37 HOH HOH A . I 6 HOH 38 338 38 HOH HOH A . I 6 HOH 39 339 39 HOH HOH A . I 6 HOH 40 340 41 HOH HOH A . I 6 HOH 41 341 42 HOH HOH A . I 6 HOH 42 342 43 HOH HOH A . I 6 HOH 43 343 44 HOH HOH A . I 6 HOH 44 344 45 HOH HOH A . I 6 HOH 45 345 46 HOH HOH A . I 6 HOH 46 346 47 HOH HOH A . I 6 HOH 47 347 48 HOH HOH A . I 6 HOH 48 348 49 HOH HOH A . I 6 HOH 49 349 50 HOH HOH A . I 6 HOH 50 350 51 HOH HOH A . I 6 HOH 51 351 52 HOH HOH A . I 6 HOH 52 352 53 HOH HOH A . I 6 HOH 53 353 54 HOH HOH A . I 6 HOH 54 354 55 HOH HOH A . I 6 HOH 55 355 56 HOH HOH A . I 6 HOH 56 356 57 HOH HOH A . I 6 HOH 57 357 58 HOH HOH A . I 6 HOH 58 358 59 HOH HOH A . I 6 HOH 59 359 60 HOH HOH A . I 6 HOH 60 360 61 HOH HOH A . I 6 HOH 61 361 62 HOH HOH A . I 6 HOH 62 362 63 HOH HOH A . I 6 HOH 63 363 64 HOH HOH A . I 6 HOH 64 364 65 HOH HOH A . I 6 HOH 65 365 66 HOH HOH A . I 6 HOH 66 366 67 HOH HOH A . I 6 HOH 67 367 68 HOH HOH A . I 6 HOH 68 368 69 HOH HOH A . I 6 HOH 69 369 70 HOH HOH A . I 6 HOH 70 370 71 HOH HOH A . I 6 HOH 71 371 72 HOH HOH A . I 6 HOH 72 372 74 HOH HOH A . I 6 HOH 73 373 75 HOH HOH A . I 6 HOH 74 374 76 HOH HOH A . I 6 HOH 75 375 77 HOH HOH A . I 6 HOH 76 376 78 HOH HOH A . I 6 HOH 77 377 79 HOH HOH A . I 6 HOH 78 378 80 HOH HOH A . I 6 HOH 79 379 83 HOH HOH A . I 6 HOH 80 380 84 HOH HOH A . I 6 HOH 81 381 85 HOH HOH A . I 6 HOH 82 382 86 HOH HOH A . I 6 HOH 83 383 89 HOH HOH A . I 6 HOH 84 384 90 HOH HOH A . I 6 HOH 85 385 97 HOH HOH A . I 6 HOH 86 386 99 HOH HOH A . I 6 HOH 87 387 101 HOH HOH A . I 6 HOH 88 388 103 HOH HOH A . I 6 HOH 89 389 104 HOH HOH A . I 6 HOH 90 390 105 HOH HOH A . I 6 HOH 91 391 107 HOH HOH A . I 6 HOH 92 392 108 HOH HOH A . I 6 HOH 93 393 110 HOH HOH A . I 6 HOH 94 394 111 HOH HOH A . I 6 HOH 95 395 113 HOH HOH A . I 6 HOH 96 396 114 HOH HOH A . I 6 HOH 97 397 115 HOH HOH A . I 6 HOH 98 398 116 HOH HOH A . I 6 HOH 99 399 117 HOH HOH A . I 6 HOH 100 400 118 HOH HOH A . I 6 HOH 101 401 119 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data scaling' . ? 1 PHENIX 'model building' AutoSol ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 PHENIX phasing AutoSol ? 6 # _cell.entry_id 4ODP _cell.length_a 93.690 _cell.length_b 93.690 _cell.length_c 93.690 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4ODP _symmetry.space_group_name_H-M 'P 41 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 213 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4ODP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_percent_sol 50.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '28% PEG400, 0.1 M HEPES, pH 7.5, 0.2 M calcium chloride, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-07-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.4000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.4000 # _reflns.entry_id 4ODP _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 29.627 _reflns.d_resolution_high 1.747 _reflns.number_obs 14816 _reflns.number_all 14823 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.044 _reflns.pdbx_netI_over_sigmaI 35.85 _reflns.B_iso_Wilson_estimate 29.88 _reflns.pdbx_redundancy 17.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.747 _reflns_shell.d_res_low 1.79 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.872 _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.pdbx_redundancy 16.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1993 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4ODP _refine.ls_number_reflns_obs 14816 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.627 _refine.ls_d_res_high 1.747 _refine.ls_percent_reflns_obs 99.99 _refine.ls_R_factor_obs 0.1849 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1844 _refine.ls_R_factor_R_free 0.2018 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 3.13 _refine.ls_number_reflns_R_free 468 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details 'PDB ENTRY 3LUO' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.21 _refine.pdbx_overall_phase_error 19.50 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 843 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 101 _refine_hist.number_atoms_total 950 _refine_hist.d_res_high 1.747 _refine_hist.d_res_low 29.627 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.016 ? ? 912 ? 'X-RAY DIFFRACTION' f_angle_d 1.258 ? ? 1247 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 15.012 ? ? 325 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.087 ? ? 128 ? 'X-RAY DIFFRACTION' f_plane_restr 0.007 ? ? 160 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.747 1.8568 4352 0.2418 100.0 0.2804 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.8568 2.0001 4354 0.1846 100.0 0.1871 . . 146 . . . . 'X-RAY DIFFRACTION' . 2.0001 2.2013 4313 0.1799 100.0 0.2272 . . 158 . . . . 'X-RAY DIFFRACTION' . 2.2013 2.5197 4361 0.1898 100.0 0.2132 . . 132 . . . . 'X-RAY DIFFRACTION' . 2.5197 3.1740 4341 0.2001 100.0 0.2273 . . 153 . . . . 'X-RAY DIFFRACTION' . 3.1740 29.6316 4390 0.1724 100.0 0.1719 . . 116 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4ODP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4ODP _struct.title 'Structure of SlyD delta-IF from Thermus thermophilus in complex with S2-W23A peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4ODP _struct_keywords.pdbx_keywords 'ISOMERASE, CHAPERONE' _struct_keywords.text 'FKBP domain, chaperone, peptidyl-prolyl isomerase, PPIase, ISOMERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q5SLE7_THET8 Q5SLE7 1 MKVGQDKVVTIRYTLQVEGEVLDQGELSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYG 1 ? 2 UNP FKB1A_HUMAN P62942 1 ATGHPGIIPPHAT 85 ? 3 UNP Q5SLE7_THET8 Q5SLE7 1 LDFQVEVVKVREATPEELLHGHAH 126 ? 4 UNP RS2_ECOLI P0A7V0 2 TRYWNPKMKPFIFGA 20 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4ODP A 1 ? 64 ? Q5SLE7 1 ? 64 ? 1 64 2 2 4ODP A 65 ? 77 ? P62942 85 ? 97 ? 65 77 3 3 4ODP A 78 ? 101 ? Q5SLE7 126 ? 149 ? 78 101 4 4 4ODP B 1 ? 15 ? P0A7V0 20 ? 34 ? 20 34 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 4ODP PRO A 102 ? UNP Q5SLE7 ? ? 'expression tag' 102 1 3 4ODP SER A 103 ? UNP Q5SLE7 ? ? 'expression tag' 103 2 3 4ODP GLY A 104 ? UNP Q5SLE7 ? ? 'expression tag' 104 3 3 4ODP HIS A 105 ? UNP Q5SLE7 ? ? 'expression tag' 105 4 3 4ODP HIS A 106 ? UNP Q5SLE7 ? ? 'expression tag' 106 5 3 4ODP HIS A 107 ? UNP Q5SLE7 ? ? 'expression tag' 107 6 3 4ODP HIS A 108 ? UNP Q5SLE7 ? ? 'expression tag' 108 7 3 4ODP HIS A 109 ? UNP Q5SLE7 ? ? 'expression tag' 109 8 3 4ODP HIS A 110 ? UNP Q5SLE7 ? ? 'expression tag' 110 9 4 4ODP ALA B 4 ? UNP P0A7V0 TRP 23 'engineered mutation' 23 10 4 4ODP NH2 B 16 ? UNP P0A7V0 ? ? amidation 35 11 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1230 ? 1 MORE -51 ? 1 'SSA (A^2)' 6700 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 37 ? GLU A 45 ? ILE A 37 GLU A 45 1 ? 9 HELX_P HELX_P2 2 GLU A 60 ? ALA A 62 ? GLU A 60 ALA A 62 5 ? 3 HELX_P HELX_P3 3 THR A 91 ? GLY A 98 ? THR A 91 GLY A 98 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLN 16 OE1 ? ? ? 1_555 G CA . CA ? ? A GLN 16 A CA 205 1_555 ? ? ? ? ? ? ? 2.225 ? ? metalc2 metalc ? ? A HIS 33 O ? ? ? 1_555 F CA . CA ? ? A HIS 33 A CA 204 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc3 metalc ? ? A ASN 35 OD1 ? ? ? 1_555 F CA . CA ? ? A ASN 35 A CA 204 1_555 ? ? ? ? ? ? ? 2.599 ? ? metalc4 metalc ? ? A GLU 49 OE2 ? ? ? 1_555 D CA . CA ? ? A GLU 49 A CA 202 1_555 ? ? ? ? ? ? ? 2.424 ? ? metalc5 metalc ? ? A GLU 49 OE1 ? ? ? 1_555 D CA . CA ? ? A GLU 49 A CA 202 1_555 ? ? ? ? ? ? ? 2.493 ? ? metalc6 metalc ? ? A ALA 52 O ? ? ? 1_555 E CA . CA ? ? A ALA 52 A CA 203 1_555 ? ? ? ? ? ? ? 2.368 ? ? metalc7 metalc ? ? A HIS 97 ND1 ? ? ? 1_555 H NI . NI ? ? A HIS 97 A NI 206 1_555 ? ? ? ? ? ? ? 2.235 ? ? metalc8 metalc ? ? A HIS 99 NE2 ? ? ? 1_555 H NI . NI ? ? A HIS 99 A NI 206 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc9 metalc ? ? A HIS 101 NE2 ? ? ? 1_555 H NI . NI ? ? A HIS 101 A NI 206 1_555 ? ? ? ? ? ? ? 2.141 ? ? metalc10 metalc ? ? A HIS 106 NE2 ? ? ? 19_555 H NI . NI ? ? A HIS 106 A NI 206 1_555 ? ? ? ? ? ? ? 2.239 ? ? metalc11 metalc ? ? A HIS 108 NE2 ? ? ? 1_555 H NI . NI ? ? A HIS 108 A NI 206 1_555 ? ? ? ? ? ? ? 2.158 ? ? metalc12 metalc ? ? A HIS 110 NE2 ? ? ? 1_555 H NI . NI ? ? A HIS 110 A NI 206 1_555 ? ? ? ? ? ? ? 2.114 ? ? metalc13 metalc ? ? D CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 202 A HOH 320 1_555 ? ? ? ? ? ? ? 2.494 ? ? metalc14 metalc ? ? D CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 202 A HOH 363 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc15 metalc ? ? D CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 202 A HOH 370 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc16 metalc ? ? D CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 202 A HOH 388 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc17 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 203 A HOH 308 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc18 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 203 A HOH 350 1_555 ? ? ? ? ? ? ? 2.402 ? ? metalc19 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 203 A HOH 378 1_555 ? ? ? ? ? ? ? 2.340 ? ? metalc20 metalc ? ? E CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 203 A HOH 391 1_555 ? ? ? ? ? ? ? 2.351 ? ? metalc21 metalc ? ? F CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 204 A HOH 321 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc22 metalc ? ? F CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 204 A HOH 353 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc23 metalc ? ? F CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 204 A HOH 375 1_555 ? ? ? ? ? ? ? 2.462 ? ? metalc24 metalc ? ? F CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 204 A HOH 384 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc25 metalc ? ? G CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 205 A HOH 331 1_555 ? ? ? ? ? ? ? 2.426 ? ? metalc26 metalc ? ? G CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 205 A HOH 374 1_555 ? ? ? ? ? ? ? 2.400 ? ? metalc27 metalc ? ? G CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 205 A HOH 376 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc28 metalc ? ? G CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 205 A HOH 387 1_555 ? ? ? ? ? ? ? 2.472 ? ? metalc29 metalc ? ? G CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 205 A HOH 398 1_555 ? ? ? ? ? ? ? 2.515 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLN 16 ? A GLN 16 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 331 ? 1_555 79.1 ? 2 OE1 ? A GLN 16 ? A GLN 16 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 374 ? 1_555 153.9 ? 3 O ? I HOH . ? A HOH 331 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 374 ? 1_555 126.7 ? 4 OE1 ? A GLN 16 ? A GLN 16 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 376 ? 1_555 88.9 ? 5 O ? I HOH . ? A HOH 331 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 376 ? 1_555 86.0 ? 6 O ? I HOH . ? A HOH 374 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 376 ? 1_555 89.3 ? 7 OE1 ? A GLN 16 ? A GLN 16 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 387 ? 1_555 76.3 ? 8 O ? I HOH . ? A HOH 331 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 387 ? 1_555 120.2 ? 9 O ? I HOH . ? A HOH 374 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 387 ? 1_555 90.9 ? 10 O ? I HOH . ? A HOH 376 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 387 ? 1_555 145.7 ? 11 OE1 ? A GLN 16 ? A GLN 16 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 398 ? 1_555 80.2 ? 12 O ? I HOH . ? A HOH 331 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 398 ? 1_555 153.3 ? 13 O ? I HOH . ? A HOH 374 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 398 ? 1_555 74.0 ? 14 O ? I HOH . ? A HOH 376 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 398 ? 1_555 76.9 ? 15 O ? I HOH . ? A HOH 387 ? 1_555 CA ? G CA . ? A CA 205 ? 1_555 O ? I HOH . ? A HOH 398 ? 1_555 70.2 ? 16 O ? A HIS 33 ? A HIS 33 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 OD1 ? A ASN 35 ? A ASN 35 ? 1_555 66.5 ? 17 O ? A HIS 33 ? A HIS 33 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 321 ? 1_555 91.7 ? 18 OD1 ? A ASN 35 ? A ASN 35 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 321 ? 1_555 96.4 ? 19 O ? A HIS 33 ? A HIS 33 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 353 ? 1_555 98.7 ? 20 OD1 ? A ASN 35 ? A ASN 35 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 353 ? 1_555 90.6 ? 21 O ? I HOH . ? A HOH 321 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 353 ? 1_555 169.1 ? 22 O ? A HIS 33 ? A HIS 33 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 375 ? 1_555 152.2 ? 23 OD1 ? A ASN 35 ? A ASN 35 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 375 ? 1_555 141.3 ? 24 O ? I HOH . ? A HOH 321 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 375 ? 1_555 84.1 ? 25 O ? I HOH . ? A HOH 353 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 375 ? 1_555 85.3 ? 26 O ? A HIS 33 ? A HIS 33 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 384 ? 1_555 118.8 ? 27 OD1 ? A ASN 35 ? A ASN 35 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 384 ? 1_555 61.1 ? 28 O ? I HOH . ? A HOH 321 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 384 ? 1_555 66.0 ? 29 O ? I HOH . ? A HOH 353 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 384 ? 1_555 110.8 ? 30 O ? I HOH . ? A HOH 375 ? 1_555 CA ? F CA . ? A CA 204 ? 1_555 O ? I HOH . ? A HOH 384 ? 1_555 84.5 ? 31 OE2 ? A GLU 49 ? A GLU 49 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 OE1 ? A GLU 49 ? A GLU 49 ? 1_555 52.8 ? 32 OE2 ? A GLU 49 ? A GLU 49 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 320 ? 1_555 82.6 ? 33 OE1 ? A GLU 49 ? A GLU 49 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 320 ? 1_555 135.3 ? 34 OE2 ? A GLU 49 ? A GLU 49 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 363 ? 1_555 103.3 ? 35 OE1 ? A GLU 49 ? A GLU 49 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 363 ? 1_555 89.8 ? 36 O ? I HOH . ? A HOH 320 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 363 ? 1_555 105.3 ? 37 OE2 ? A GLU 49 ? A GLU 49 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 370 ? 1_555 86.8 ? 38 OE1 ? A GLU 49 ? A GLU 49 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 370 ? 1_555 84.1 ? 39 O ? I HOH . ? A HOH 320 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 370 ? 1_555 91.2 ? 40 O ? I HOH . ? A HOH 363 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 370 ? 1_555 161.5 ? 41 OE2 ? A GLU 49 ? A GLU 49 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 388 ? 1_555 110.6 ? 42 OE1 ? A GLU 49 ? A GLU 49 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 388 ? 1_555 58.1 ? 43 O ? I HOH . ? A HOH 320 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 388 ? 1_555 164.4 ? 44 O ? I HOH . ? A HOH 363 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 388 ? 1_555 80.2 ? 45 O ? I HOH . ? A HOH 370 ? 1_555 CA ? D CA . ? A CA 202 ? 1_555 O ? I HOH . ? A HOH 388 ? 1_555 81.8 ? 46 O ? A ALA 52 ? A ALA 52 ? 1_555 CA ? E CA . ? A CA 203 ? 1_555 O ? I HOH . ? A HOH 308 ? 1_555 78.8 ? 47 O ? A ALA 52 ? A ALA 52 ? 1_555 CA ? E CA . ? A CA 203 ? 1_555 O ? I HOH . ? A HOH 350 ? 1_555 85.7 ? 48 O ? I HOH . ? A HOH 308 ? 1_555 CA ? E CA . ? A CA 203 ? 1_555 O ? I HOH . ? A HOH 350 ? 1_555 154.1 ? 49 O ? A ALA 52 ? A ALA 52 ? 1_555 CA ? E CA . ? A CA 203 ? 1_555 O ? I HOH . ? A HOH 378 ? 1_555 89.9 ? 50 O ? I HOH . ? A HOH 308 ? 1_555 CA ? E CA . ? A CA 203 ? 1_555 O ? I HOH . ? A HOH 378 ? 1_555 86.1 ? 51 O ? I HOH . ? A HOH 350 ? 1_555 CA ? E CA . ? A CA 203 ? 1_555 O ? I HOH . ? A HOH 378 ? 1_555 73.1 ? 52 O ? A ALA 52 ? A ALA 52 ? 1_555 CA ? E CA . ? A CA 203 ? 1_555 O ? I HOH . ? A HOH 391 ? 1_555 149.8 ? 53 O ? I HOH . ? A HOH 308 ? 1_555 CA ? E CA . ? A CA 203 ? 1_555 O ? I HOH . ? A HOH 391 ? 1_555 72.7 ? 54 O ? I HOH . ? A HOH 350 ? 1_555 CA ? E CA . ? A CA 203 ? 1_555 O ? I HOH . ? A HOH 391 ? 1_555 124.5 ? 55 O ? I HOH . ? A HOH 378 ? 1_555 CA ? E CA . ? A CA 203 ? 1_555 O ? I HOH . ? A HOH 391 ? 1_555 97.9 ? 56 ND1 ? A HIS 97 ? A HIS 97 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 99 ? A HIS 99 ? 1_555 96.9 ? 57 ND1 ? A HIS 97 ? A HIS 97 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 101 ? A HIS 101 ? 1_555 86.5 ? 58 NE2 ? A HIS 99 ? A HIS 99 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 101 ? A HIS 101 ? 1_555 93.0 ? 59 ND1 ? A HIS 97 ? A HIS 97 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 106 ? A HIS 106 ? 19_555 176.4 ? 60 NE2 ? A HIS 99 ? A HIS 99 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 106 ? A HIS 106 ? 19_555 86.6 ? 61 NE2 ? A HIS 101 ? A HIS 101 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 106 ? A HIS 106 ? 19_555 93.4 ? 62 ND1 ? A HIS 97 ? A HIS 97 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 108 ? A HIS 108 ? 1_555 89.7 ? 63 NE2 ? A HIS 99 ? A HIS 99 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 108 ? A HIS 108 ? 1_555 173.2 ? 64 NE2 ? A HIS 101 ? A HIS 101 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 108 ? A HIS 108 ? 1_555 88.7 ? 65 NE2 ? A HIS 106 ? A HIS 106 ? 19_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 108 ? A HIS 108 ? 1_555 86.7 ? 66 ND1 ? A HIS 97 ? A HIS 97 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 92.5 ? 67 NE2 ? A HIS 99 ? A HIS 99 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 91.1 ? 68 NE2 ? A HIS 101 ? A HIS 101 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 175.9 ? 69 NE2 ? A HIS 106 ? A HIS 106 ? 19_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 87.3 ? 70 NE2 ? A HIS 108 ? A HIS 108 ? 1_555 NI ? H NI . ? A NI 206 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 87.3 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 9 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 28 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 10 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 29 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.95 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 20 ? LEU A 30 ? GLU A 20 LEU A 30 A 2 LYS A 7 ? VAL A 17 ? LYS A 7 VAL A 17 A 3 THR A 77 ? GLU A 89 ? THR A 77 GLU A 89 A 4 ALA A 52 ? PRO A 58 ? ALA A 52 PRO A 58 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASP A 23 ? O ASP A 23 N LEU A 15 ? N LEU A 15 A 2 3 N GLN A 16 ? N GLN A 16 O ASP A 79 ? O ASP A 79 A 3 4 O LEU A 78 ? O LEU A 78 N VAL A 57 ? N VAL A 57 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 201 ? 5 'BINDING SITE FOR RESIDUE CL A 201' AC2 Software A CA 202 ? 8 'BINDING SITE FOR RESIDUE CA A 202' AC3 Software A CA 203 ? 6 'BINDING SITE FOR RESIDUE CA A 203' AC4 Software A CA 204 ? 7 'BINDING SITE FOR RESIDUE CA A 204' AC5 Software A CA 205 ? 6 'BINDING SITE FOR RESIDUE CA A 205' AC6 Software A NI 206 ? 6 'BINDING SITE FOR RESIDUE NI A 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 TYR A 29 ? TYR A 29 . ? 1_555 ? 2 AC1 5 LEU A 30 ? LEU A 30 . ? 1_555 ? 3 AC1 5 ASN A 35 ? ASN A 35 . ? 1_555 ? 4 AC1 5 ALA A 100 ? ALA A 100 . ? 1_555 ? 5 AC1 5 LYS B 9 ? LYS B 28 . ? 1_555 ? 6 AC2 8 GLU A 49 ? GLU A 49 . ? 7_564 ? 7 AC2 8 GLU A 49 ? GLU A 49 . ? 1_555 ? 8 AC2 8 HOH I . ? HOH A 320 . ? 1_555 ? 9 AC2 8 HOH I . ? HOH A 363 . ? 1_555 ? 10 AC2 8 HOH I . ? HOH A 370 . ? 1_555 ? 11 AC2 8 HOH I . ? HOH A 388 . ? 10_655 ? 12 AC2 8 HOH I . ? HOH A 388 . ? 7_564 ? 13 AC2 8 HOH I . ? HOH A 388 . ? 1_555 ? 14 AC3 6 ALA A 52 ? ALA A 52 . ? 1_555 ? 15 AC3 6 GLU A 89 ? GLU A 89 . ? 10_655 ? 16 AC3 6 HOH I . ? HOH A 308 . ? 1_555 ? 17 AC3 6 HOH I . ? HOH A 350 . ? 1_555 ? 18 AC3 6 HOH I . ? HOH A 378 . ? 1_555 ? 19 AC3 6 HOH I . ? HOH A 391 . ? 1_555 ? 20 AC4 7 HIS A 33 ? HIS A 33 . ? 1_555 ? 21 AC4 7 ASN A 35 ? ASN A 35 . ? 1_555 ? 22 AC4 7 HOH I . ? HOH A 305 . ? 17_456 ? 23 AC4 7 HOH I . ? HOH A 321 . ? 1_555 ? 24 AC4 7 HOH I . ? HOH A 353 . ? 1_555 ? 25 AC4 7 HOH I . ? HOH A 375 . ? 1_555 ? 26 AC4 7 HOH I . ? HOH A 384 . ? 1_555 ? 27 AC5 6 GLN A 16 ? GLN A 16 . ? 1_555 ? 28 AC5 6 HOH I . ? HOH A 331 . ? 1_555 ? 29 AC5 6 HOH I . ? HOH A 374 . ? 1_555 ? 30 AC5 6 HOH I . ? HOH A 376 . ? 1_555 ? 31 AC5 6 HOH I . ? HOH A 387 . ? 1_555 ? 32 AC5 6 HOH I . ? HOH A 398 . ? 1_555 ? 33 AC6 6 HIS A 97 ? HIS A 97 . ? 1_555 ? 34 AC6 6 HIS A 99 ? HIS A 99 . ? 1_555 ? 35 AC6 6 HIS A 101 ? HIS A 101 . ? 1_555 ? 36 AC6 6 HIS A 106 ? HIS A 106 . ? 19_555 ? 37 AC6 6 HIS A 108 ? HIS A 108 . ? 1_555 ? 38 AC6 6 HIS A 110 ? HIS A 110 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 359 ? ? O A HOH 397 ? ? 2.08 2 1 O A HOH 371 ? ? O A HOH 383 ? ? 2.17 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 349 ? I HOH . 2 1 A HOH 351 ? I HOH . 3 1 A HOH 388 ? I HOH . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 38.2882 62.1847 32.0635 0.2296 0.2624 0.1895 -0.0441 -0.0060 0.0202 0.7404 2.0103 0.4127 -0.0565 0.0713 0.1342 0.0191 -0.2254 0.0192 0.0019 0.0225 -0.1402 -0.0409 -0.0709 0.0002 'X-RAY DIFFRACTION' 2 ? refined 45.9735 57.7243 33.2884 0.4709 0.6855 0.8146 -0.1108 -0.0660 0.0101 0.0068 -0.0009 0.0041 0.0060 0.0005 0.0071 0.1726 -0.0801 -0.0670 0.1697 0.1299 -0.2852 -0.0215 0.0620 -0.0000 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'B' ; # _pdbx_entry_details.entry_id 4ODP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;PROTEIN SLYD DELTA-IF IS A CHIMERA IN WHICH THE IF DOMAIN OF SYLD (UNP RESIDUES 65-125) HAS BEEN REPLACED BY THE FLAP LOOP OF FKBP12 (UNP RESIDUES 85-97). ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A TYR 63 ? A TYR 63 2 1 Y 1 A GLY 64 ? A GLY 64 3 1 Y 1 A ALA 65 ? A ALA 65 4 1 Y 1 A THR 66 ? A THR 66 5 1 Y 1 A GLY 67 ? A GLY 67 6 1 Y 1 A HIS 68 ? A HIS 68 7 1 Y 1 A PRO 69 ? A PRO 69 8 1 Y 1 A GLY 70 ? A GLY 70 9 1 Y 1 A ILE 71 ? A ILE 71 10 1 Y 1 B THR 20 ? B THR 1 11 1 Y 1 B ARG 21 ? B ARG 2 12 1 Y 1 B TYR 22 ? B TYR 3 13 1 Y 1 B ALA 23 ? B ALA 4 14 1 Y 1 B ASN 24 ? B ASN 5 15 1 Y 1 B PRO 25 ? B PRO 6 16 1 Y 1 B LYS 26 ? B LYS 7 17 1 Y 1 B PHE 32 ? B PHE 13 18 1 Y 1 B GLY 33 ? B GLY 14 19 1 Y 1 B ALA 34 ? B ALA 15 20 1 Y 1 B NH2 35 ? B NH2 16 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CL CL CL N N 75 GLN N N N N 76 GLN CA C N S 77 GLN C C N N 78 GLN O O N N 79 GLN CB C N N 80 GLN CG C N N 81 GLN CD C N N 82 GLN OE1 O N N 83 GLN NE2 N N N 84 GLN OXT O N N 85 GLN H H N N 86 GLN H2 H N N 87 GLN HA H N N 88 GLN HB2 H N N 89 GLN HB3 H N N 90 GLN HG2 H N N 91 GLN HG3 H N N 92 GLN HE21 H N N 93 GLN HE22 H N N 94 GLN HXT H N N 95 GLU N N N N 96 GLU CA C N S 97 GLU C C N N 98 GLU O O N N 99 GLU CB C N N 100 GLU CG C N N 101 GLU CD C N N 102 GLU OE1 O N N 103 GLU OE2 O N N 104 GLU OXT O N N 105 GLU H H N N 106 GLU H2 H N N 107 GLU HA H N N 108 GLU HB2 H N N 109 GLU HB3 H N N 110 GLU HG2 H N N 111 GLU HG3 H N N 112 GLU HE2 H N N 113 GLU HXT H N N 114 GLY N N N N 115 GLY CA C N N 116 GLY C C N N 117 GLY O O N N 118 GLY OXT O N N 119 GLY H H N N 120 GLY H2 H N N 121 GLY HA2 H N N 122 GLY HA3 H N N 123 GLY HXT H N N 124 HIS N N N N 125 HIS CA C N S 126 HIS C C N N 127 HIS O O N N 128 HIS CB C N N 129 HIS CG C Y N 130 HIS ND1 N Y N 131 HIS CD2 C Y N 132 HIS CE1 C Y N 133 HIS NE2 N Y N 134 HIS OXT O N N 135 HIS H H N N 136 HIS H2 H N N 137 HIS HA H N N 138 HIS HB2 H N N 139 HIS HB3 H N N 140 HIS HD1 H N N 141 HIS HD2 H N N 142 HIS HE1 H N N 143 HIS HE2 H N N 144 HIS HXT H N N 145 HOH O O N N 146 HOH H1 H N N 147 HOH H2 H N N 148 ILE N N N N 149 ILE CA C N S 150 ILE C C N N 151 ILE O O N N 152 ILE CB C N S 153 ILE CG1 C N N 154 ILE CG2 C N N 155 ILE CD1 C N N 156 ILE OXT O N N 157 ILE H H N N 158 ILE H2 H N N 159 ILE HA H N N 160 ILE HB H N N 161 ILE HG12 H N N 162 ILE HG13 H N N 163 ILE HG21 H N N 164 ILE HG22 H N N 165 ILE HG23 H N N 166 ILE HD11 H N N 167 ILE HD12 H N N 168 ILE HD13 H N N 169 ILE HXT H N N 170 LEU N N N N 171 LEU CA C N S 172 LEU C C N N 173 LEU O O N N 174 LEU CB C N N 175 LEU CG C N N 176 LEU CD1 C N N 177 LEU CD2 C N N 178 LEU OXT O N N 179 LEU H H N N 180 LEU H2 H N N 181 LEU HA H N N 182 LEU HB2 H N N 183 LEU HB3 H N N 184 LEU HG H N N 185 LEU HD11 H N N 186 LEU HD12 H N N 187 LEU HD13 H N N 188 LEU HD21 H N N 189 LEU HD22 H N N 190 LEU HD23 H N N 191 LEU HXT H N N 192 LYS N N N N 193 LYS CA C N S 194 LYS C C N N 195 LYS O O N N 196 LYS CB C N N 197 LYS CG C N N 198 LYS CD C N N 199 LYS CE C N N 200 LYS NZ N N N 201 LYS OXT O N N 202 LYS H H N N 203 LYS H2 H N N 204 LYS HA H N N 205 LYS HB2 H N N 206 LYS HB3 H N N 207 LYS HG2 H N N 208 LYS HG3 H N N 209 LYS HD2 H N N 210 LYS HD3 H N N 211 LYS HE2 H N N 212 LYS HE3 H N N 213 LYS HZ1 H N N 214 LYS HZ2 H N N 215 LYS HZ3 H N N 216 LYS HXT H N N 217 MET N N N N 218 MET CA C N S 219 MET C C N N 220 MET O O N N 221 MET CB C N N 222 MET CG C N N 223 MET SD S N N 224 MET CE C N N 225 MET OXT O N N 226 MET H H N N 227 MET H2 H N N 228 MET HA H N N 229 MET HB2 H N N 230 MET HB3 H N N 231 MET HG2 H N N 232 MET HG3 H N N 233 MET HE1 H N N 234 MET HE2 H N N 235 MET HE3 H N N 236 MET HXT H N N 237 NH2 N N N N 238 NH2 HN1 H N N 239 NH2 HN2 H N N 240 NI NI NI N N 241 PHE N N N N 242 PHE CA C N S 243 PHE C C N N 244 PHE O O N N 245 PHE CB C N N 246 PHE CG C Y N 247 PHE CD1 C Y N 248 PHE CD2 C Y N 249 PHE CE1 C Y N 250 PHE CE2 C Y N 251 PHE CZ C Y N 252 PHE OXT O N N 253 PHE H H N N 254 PHE H2 H N N 255 PHE HA H N N 256 PHE HB2 H N N 257 PHE HB3 H N N 258 PHE HD1 H N N 259 PHE HD2 H N N 260 PHE HE1 H N N 261 PHE HE2 H N N 262 PHE HZ H N N 263 PHE HXT H N N 264 PRO N N N N 265 PRO CA C N S 266 PRO C C N N 267 PRO O O N N 268 PRO CB C N N 269 PRO CG C N N 270 PRO CD C N N 271 PRO OXT O N N 272 PRO H H N N 273 PRO HA H N N 274 PRO HB2 H N N 275 PRO HB3 H N N 276 PRO HG2 H N N 277 PRO HG3 H N N 278 PRO HD2 H N N 279 PRO HD3 H N N 280 PRO HXT H N N 281 SER N N N N 282 SER CA C N S 283 SER C C N N 284 SER O O N N 285 SER CB C N N 286 SER OG O N N 287 SER OXT O N N 288 SER H H N N 289 SER H2 H N N 290 SER HA H N N 291 SER HB2 H N N 292 SER HB3 H N N 293 SER HG H N N 294 SER HXT H N N 295 THR N N N N 296 THR CA C N S 297 THR C C N N 298 THR O O N N 299 THR CB C N R 300 THR OG1 O N N 301 THR CG2 C N N 302 THR OXT O N N 303 THR H H N N 304 THR H2 H N N 305 THR HA H N N 306 THR HB H N N 307 THR HG1 H N N 308 THR HG21 H N N 309 THR HG22 H N N 310 THR HG23 H N N 311 THR HXT H N N 312 TRP N N N N 313 TRP CA C N S 314 TRP C C N N 315 TRP O O N N 316 TRP CB C N N 317 TRP CG C Y N 318 TRP CD1 C Y N 319 TRP CD2 C Y N 320 TRP NE1 N Y N 321 TRP CE2 C Y N 322 TRP CE3 C Y N 323 TRP CZ2 C Y N 324 TRP CZ3 C Y N 325 TRP CH2 C Y N 326 TRP OXT O N N 327 TRP H H N N 328 TRP H2 H N N 329 TRP HA H N N 330 TRP HB2 H N N 331 TRP HB3 H N N 332 TRP HD1 H N N 333 TRP HE1 H N N 334 TRP HE3 H N N 335 TRP HZ2 H N N 336 TRP HZ3 H N N 337 TRP HH2 H N N 338 TRP HXT H N N 339 TYR N N N N 340 TYR CA C N S 341 TYR C C N N 342 TYR O O N N 343 TYR CB C N N 344 TYR CG C Y N 345 TYR CD1 C Y N 346 TYR CD2 C Y N 347 TYR CE1 C Y N 348 TYR CE2 C Y N 349 TYR CZ C Y N 350 TYR OH O N N 351 TYR OXT O N N 352 TYR H H N N 353 TYR H2 H N N 354 TYR HA H N N 355 TYR HB2 H N N 356 TYR HB3 H N N 357 TYR HD1 H N N 358 TYR HD2 H N N 359 TYR HE1 H N N 360 TYR HE2 H N N 361 TYR HH H N N 362 TYR HXT H N N 363 VAL N N N N 364 VAL CA C N S 365 VAL C C N N 366 VAL O O N N 367 VAL CB C N N 368 VAL CG1 C N N 369 VAL CG2 C N N 370 VAL OXT O N N 371 VAL H H N N 372 VAL H2 H N N 373 VAL HA H N N 374 VAL HB H N N 375 VAL HG11 H N N 376 VAL HG12 H N N 377 VAL HG13 H N N 378 VAL HG21 H N N 379 VAL HG22 H N N 380 VAL HG23 H N N 381 VAL HXT H N N 382 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 NH2 N HN1 sing N N 224 NH2 N HN2 sing N N 225 PHE N CA sing N N 226 PHE N H sing N N 227 PHE N H2 sing N N 228 PHE CA C sing N N 229 PHE CA CB sing N N 230 PHE CA HA sing N N 231 PHE C O doub N N 232 PHE C OXT sing N N 233 PHE CB CG sing N N 234 PHE CB HB2 sing N N 235 PHE CB HB3 sing N N 236 PHE CG CD1 doub Y N 237 PHE CG CD2 sing Y N 238 PHE CD1 CE1 sing Y N 239 PHE CD1 HD1 sing N N 240 PHE CD2 CE2 doub Y N 241 PHE CD2 HD2 sing N N 242 PHE CE1 CZ doub Y N 243 PHE CE1 HE1 sing N N 244 PHE CE2 CZ sing Y N 245 PHE CE2 HE2 sing N N 246 PHE CZ HZ sing N N 247 PHE OXT HXT sing N N 248 PRO N CA sing N N 249 PRO N CD sing N N 250 PRO N H sing N N 251 PRO CA C sing N N 252 PRO CA CB sing N N 253 PRO CA HA sing N N 254 PRO C O doub N N 255 PRO C OXT sing N N 256 PRO CB CG sing N N 257 PRO CB HB2 sing N N 258 PRO CB HB3 sing N N 259 PRO CG CD sing N N 260 PRO CG HG2 sing N N 261 PRO CG HG3 sing N N 262 PRO CD HD2 sing N N 263 PRO CD HD3 sing N N 264 PRO OXT HXT sing N N 265 SER N CA sing N N 266 SER N H sing N N 267 SER N H2 sing N N 268 SER CA C sing N N 269 SER CA CB sing N N 270 SER CA HA sing N N 271 SER C O doub N N 272 SER C OXT sing N N 273 SER CB OG sing N N 274 SER CB HB2 sing N N 275 SER CB HB3 sing N N 276 SER OG HG sing N N 277 SER OXT HXT sing N N 278 THR N CA sing N N 279 THR N H sing N N 280 THR N H2 sing N N 281 THR CA C sing N N 282 THR CA CB sing N N 283 THR CA HA sing N N 284 THR C O doub N N 285 THR C OXT sing N N 286 THR CB OG1 sing N N 287 THR CB CG2 sing N N 288 THR CB HB sing N N 289 THR OG1 HG1 sing N N 290 THR CG2 HG21 sing N N 291 THR CG2 HG22 sing N N 292 THR CG2 HG23 sing N N 293 THR OXT HXT sing N N 294 TRP N CA sing N N 295 TRP N H sing N N 296 TRP N H2 sing N N 297 TRP CA C sing N N 298 TRP CA CB sing N N 299 TRP CA HA sing N N 300 TRP C O doub N N 301 TRP C OXT sing N N 302 TRP CB CG sing N N 303 TRP CB HB2 sing N N 304 TRP CB HB3 sing N N 305 TRP CG CD1 doub Y N 306 TRP CG CD2 sing Y N 307 TRP CD1 NE1 sing Y N 308 TRP CD1 HD1 sing N N 309 TRP CD2 CE2 doub Y N 310 TRP CD2 CE3 sing Y N 311 TRP NE1 CE2 sing Y N 312 TRP NE1 HE1 sing N N 313 TRP CE2 CZ2 sing Y N 314 TRP CE3 CZ3 doub Y N 315 TRP CE3 HE3 sing N N 316 TRP CZ2 CH2 doub Y N 317 TRP CZ2 HZ2 sing N N 318 TRP CZ3 CH2 sing Y N 319 TRP CZ3 HZ3 sing N N 320 TRP CH2 HH2 sing N N 321 TRP OXT HXT sing N N 322 TYR N CA sing N N 323 TYR N H sing N N 324 TYR N H2 sing N N 325 TYR CA C sing N N 326 TYR CA CB sing N N 327 TYR CA HA sing N N 328 TYR C O doub N N 329 TYR C OXT sing N N 330 TYR CB CG sing N N 331 TYR CB HB2 sing N N 332 TYR CB HB3 sing N N 333 TYR CG CD1 doub Y N 334 TYR CG CD2 sing Y N 335 TYR CD1 CE1 sing Y N 336 TYR CD1 HD1 sing N N 337 TYR CD2 CE2 doub Y N 338 TYR CD2 HD2 sing N N 339 TYR CE1 CZ doub Y N 340 TYR CE1 HE1 sing N N 341 TYR CE2 CZ sing Y N 342 TYR CE2 HE2 sing N N 343 TYR CZ OH sing N N 344 TYR OH HH sing N N 345 TYR OXT HXT sing N N 346 VAL N CA sing N N 347 VAL N H sing N N 348 VAL N H2 sing N N 349 VAL CA C sing N N 350 VAL CA CB sing N N 351 VAL CA HA sing N N 352 VAL C O doub N N 353 VAL C OXT sing N N 354 VAL CB CG1 sing N N 355 VAL CB CG2 sing N N 356 VAL CB HB sing N N 357 VAL CG1 HG11 sing N N 358 VAL CG1 HG12 sing N N 359 VAL CG1 HG13 sing N N 360 VAL CG2 HG21 sing N N 361 VAL CG2 HG22 sing N N 362 VAL CG2 HG23 sing N N 363 VAL OXT HXT sing N N 364 # _atom_sites.entry_id 4ODP _atom_sites.fract_transf_matrix[1][1] 0.010673 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010673 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010673 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N NI O S # loop_