HEADER HYDROLASE 13-JAN-14 4OEL TITLE CRYSTAL STRUCTURE OF CATHEPSIN C IN COMPLEX WITH DIPEPTIDE SUBSTRATES COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIPEPTIDYL PEPTIDASE 1 HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CATHEPSIN C, CATHEPSIN J, DIPEPTIDYL PEPTIDASE I, DPP-I, COMPND 5 DPPI, DIPEPTIDYL TRANSFERASE; COMPND 6 EC: 3.4.14.1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DIPEPTIDYL PEPTIDASE 1 LIGHT CHAIN; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: CATHEPSIN C, CATHEPSIN J, DIPEPTIDYL PEPTIDASE I, DPP-I, COMPND 12 DPPI, DIPEPTIDYL TRANSFERASE; COMPND 13 EC: 3.4.14.1; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CPPI, CTSC; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: CTSC, CPPI; SOURCE 14 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS BETA BARREL, DIPEPTIDYL AMINOPEPTIDASE I, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.ZHAO,A.SMALLWOOD,N.CONCHA REVDAT 2 29-JUL-20 4OEL 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE REVDAT 1 25-MAR-15 4OEL 0 JRNL AUTH J.K.RUBACH,G.CUI,J.L.SCHNECK,A.N.TAYLOR,B.ZHAO,A.SMALLWOOD, JRNL AUTH 2 N.NEVINS,D.WISNOSKI,S.H.THRALL,T.D.MEEK JRNL TITL THE AMINO-ACID SUBSTITUENTS OF DIPEPTIDE SUBSTRATES OF JRNL TITL 2 CATHEPSIN C CAN DETERMINE THE RATE-LIMITING STEPS OF JRNL TITL 3 CATALYSIS. JRNL REF BIOCHEMISTRY V. 51 7551 2012 JRNL REFN ISSN 0006-2960 JRNL PMID 22928782 JRNL DOI 10.1021/BI300719B REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 78896 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.870 REMARK 3 FREE R VALUE TEST SET COUNT : 4632 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.90 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4475 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2729 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4212 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE : 0.2545 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.88 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 263 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2734 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 61 REMARK 3 SOLVENT ATOMS : 331 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.99950 REMARK 3 B22 (A**2) : -0.67980 REMARK 3 B33 (A**2) : -1.31970 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.180 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.057 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2891 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3934 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 934 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 62 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 429 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2891 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 364 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3635 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.04 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.55 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.42 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 33.1354 16.2818 16.9329 REMARK 3 T TENSOR REMARK 3 T11: -0.0042 T22: -0.0519 REMARK 3 T33: -0.0577 T12: 0.0061 REMARK 3 T13: 0.0261 T23: -0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.9549 L22: 0.6770 REMARK 3 L33: 0.6945 L12: -0.1554 REMARK 3 L13: -0.0430 L23: 0.0419 REMARK 3 S TENSOR REMARK 3 S11: 0.0077 S12: 0.0305 S13: -0.0007 REMARK 3 S21: 0.1016 S22: -0.0180 S23: 0.0659 REMARK 3 S31: -0.1351 S32: -0.0836 S33: 0.0104 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OEL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084394. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 - 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85432 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.59000 REMARK 200 FOR SHELL : 2.220 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16-26% POLYETHYLENE GLYCOL-3350 AT PH REMARK 280 6.0-6.9 IN 200 MM MGCL2, 100 MM BIS-TRIS BUFFER, SITTING DROP, REMARK 280 TEMPERATURE 298K, VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.76000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.62900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 57.67100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.76000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.62900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.67100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.76000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 44.62900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.67100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.76000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 44.62900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 57.67100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 85.52000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 40080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -278.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 85.52000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 85.52000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 119 REMARK 465 THR A 120 REMARK 465 ALA A 121 REMARK 465 SER A 122 REMARK 465 GLU A 123 REMARK 465 ASN A 124 REMARK 465 VAL A 125 REMARK 465 TYR A 126 REMARK 465 VAL A 127 REMARK 465 ASN A 128 REMARK 465 THR A 129 REMARK 465 ALA A 130 REMARK 465 HIS A 131 REMARK 465 LEU A 132 REMARK 465 LYS A 133 REMARK 465 ASN A 134 REMARK 465 SER A 135 REMARK 465 GLN A 136 REMARK 465 GLU A 137 REMARK 465 LYS A 138 REMARK 465 TYR A 139 REMARK 465 SER A 140 REMARK 465 ASN A 141 REMARK 465 ARG A 142 REMARK 465 LEU A 143 REMARK 465 TYR A 144 REMARK 465 LYS A 145 REMARK 465 TYR A 146 REMARK 465 ASP A 147 REMARK 465 HIS A 148 REMARK 465 ASN A 149 REMARK 465 PHE A 150 REMARK 465 VAL A 151 REMARK 465 LYS A 152 REMARK 465 ALA A 153 REMARK 465 ILE A 154 REMARK 465 ASN A 155 REMARK 465 ALA A 156 REMARK 465 ILE A 157 REMARK 465 GLN A 158 REMARK 465 LYS A 159 REMARK 465 SER A 160 REMARK 465 TRP A 161 REMARK 465 THR A 162 REMARK 465 ALA A 163 REMARK 465 THR A 164 REMARK 465 THR A 165 REMARK 465 TYR A 166 REMARK 465 MET A 167 REMARK 465 GLU A 168 REMARK 465 TYR A 169 REMARK 465 GLU A 170 REMARK 465 THR A 171 REMARK 465 LEU A 172 REMARK 465 THR A 173 REMARK 465 LEU A 174 REMARK 465 GLY A 175 REMARK 465 ASP A 176 REMARK 465 MET A 177 REMARK 465 ILE A 178 REMARK 465 ARG A 179 REMARK 465 ARG A 180 REMARK 465 SER A 181 REMARK 465 GLY A 182 REMARK 465 GLY A 183 REMARK 465 HIS A 184 REMARK 465 SER A 185 REMARK 465 ARG A 186 REMARK 465 LYS A 187 REMARK 465 ILE A 188 REMARK 465 PRO A 189 REMARK 465 ARG A 190 REMARK 465 PRO A 191 REMARK 465 LYS A 192 REMARK 465 PRO A 193 REMARK 465 ALA A 194 REMARK 465 PRO A 195 REMARK 465 LEU A 196 REMARK 465 THR A 197 REMARK 465 ALA A 198 REMARK 465 GLU A 199 REMARK 465 ILE A 200 REMARK 465 GLN A 201 REMARK 465 GLN A 202 REMARK 465 LYS A 203 REMARK 465 ILE A 204 REMARK 465 GLY A 368 REMARK 465 LEU A 369 REMARK 465 ARG A 370 REMARK 465 ASP B 371 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 37 CD OE1 OE2 REMARK 470 LYS A 38 CD CE NZ REMARK 470 LYS A 39 NZ REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 GLU A 85 CG CD OE1 OE2 REMARK 470 GLU A 86 CG CD OE1 OE2 REMARK 470 LYS A 116 NZ REMARK 470 LYS A 308 CG CD CE NZ REMARK 470 LYS A 360 CE NZ REMARK 470 HIS A 365 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 367 OG1 CG2 REMARK 470 SER B 392 OG REMARK 470 ARG B 418 CG CD NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 311 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 33 122.11 -31.51 REMARK 500 MET A 33 118.88 -26.63 REMARK 500 PRO A 35 152.93 -49.16 REMARK 500 ASP A 48 27.11 -151.04 REMARK 500 TYR A 64 -120.42 52.91 REMARK 500 ASN A 215 80.59 -150.70 REMARK 500 ALA A 229 -151.38 62.02 REMARK 500 ILE A 282 -61.45 -106.26 REMARK 500 ASN B 380 -2.00 -141.23 REMARK 500 ILE B 429 48.61 -147.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 503 REMARK 610 NAG A 504 REMARK 610 NAG A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OEM RELATED DB: PDB DBREF 4OEL A 1 370 UNP P53634 CATC_HUMAN 25 394 DBREF 4OEL B 371 439 UNP P53634 CATC_HUMAN 1 69 SEQADV 4OEL THR A 129 UNP P53634 ILE 153 ENGINEERED MUTATION SEQADV 4OEL GLU B 440 UNP P53634 EXPRESSION TAG SEQRES 1 A 370 ASP THR PRO ALA ASN CYS THR TYR LEU ASP LEU LEU GLY SEQRES 2 A 370 THR TRP VAL PHE GLN VAL GLY SER SER GLY SER GLN ARG SEQRES 3 A 370 ASP VAL ASN CYS SER VAL MET GLY PRO GLN GLU LYS LYS SEQRES 4 A 370 VAL VAL VAL TYR LEU GLN LYS LEU ASP THR ALA TYR ASP SEQRES 5 A 370 ASP LEU GLY ASN SER GLY HIS PHE THR ILE ILE TYR ASN SEQRES 6 A 370 GLN GLY PHE GLU ILE VAL LEU ASN ASP TYR LYS TRP PHE SEQRES 7 A 370 ALA PHE PHE LYS TYR LYS GLU GLU GLY SER LYS VAL THR SEQRES 8 A 370 THR TYR CYS ASN GLU THR MET THR GLY TRP VAL HIS ASP SEQRES 9 A 370 VAL LEU GLY ARG ASN TRP ALA CYS PHE THR GLY LYS LYS SEQRES 10 A 370 VAL GLY THR ALA SER GLU ASN VAL TYR VAL ASN THR ALA SEQRES 11 A 370 HIS LEU LYS ASN SER GLN GLU LYS TYR SER ASN ARG LEU SEQRES 12 A 370 TYR LYS TYR ASP HIS ASN PHE VAL LYS ALA ILE ASN ALA SEQRES 13 A 370 ILE GLN LYS SER TRP THR ALA THR THR TYR MET GLU TYR SEQRES 14 A 370 GLU THR LEU THR LEU GLY ASP MET ILE ARG ARG SER GLY SEQRES 15 A 370 GLY HIS SER ARG LYS ILE PRO ARG PRO LYS PRO ALA PRO SEQRES 16 A 370 LEU THR ALA GLU ILE GLN GLN LYS ILE LEU HIS LEU PRO SEQRES 17 A 370 THR SER TRP ASP TRP ARG ASN VAL HIS GLY ILE ASN PHE SEQRES 18 A 370 VAL SER PRO VAL ARG ASN GLN ALA SER CYS GLY SER CYS SEQRES 19 A 370 TYR SER PHE ALA SER MET GLY MET LEU GLU ALA ARG ILE SEQRES 20 A 370 ARG ILE LEU THR ASN ASN SER GLN THR PRO ILE LEU SER SEQRES 21 A 370 PRO GLN GLU VAL VAL SER CYS SER GLN TYR ALA GLN GLY SEQRES 22 A 370 CYS GLU GLY GLY PHE PRO TYR LEU ILE ALA GLY LYS TYR SEQRES 23 A 370 ALA GLN ASP PHE GLY LEU VAL GLU GLU ALA CYS PHE PRO SEQRES 24 A 370 TYR THR GLY THR ASP SER PRO CYS LYS MET LYS GLU ASP SEQRES 25 A 370 CYS PHE ARG TYR TYR SER SER GLU TYR HIS TYR VAL GLY SEQRES 26 A 370 GLY PHE TYR GLY GLY CYS ASN GLU ALA LEU MET LYS LEU SEQRES 27 A 370 GLU LEU VAL HIS HIS GLY PRO MET ALA VAL ALA PHE GLU SEQRES 28 A 370 VAL TYR ASP ASP PHE LEU HIS TYR LYS LYS GLY ILE TYR SEQRES 29 A 370 HIS HIS THR GLY LEU ARG SEQRES 1 B 70 ASP PRO PHE ASN PRO PHE GLU LEU THR ASN HIS ALA VAL SEQRES 2 B 70 LEU LEU VAL GLY TYR GLY THR ASP SER ALA SER GLY MET SEQRES 3 B 70 ASP TYR TRP ILE VAL LYS ASN SER TRP GLY THR GLY TRP SEQRES 4 B 70 GLY GLU ASN GLY TYR PHE ARG ILE ARG ARG GLY THR ASP SEQRES 5 B 70 GLU CYS ALA ILE GLU SER ILE ALA VAL ALA ALA THR PRO SEQRES 6 B 70 ILE PRO LYS LEU GLU HET SER A 501 6 HET TYR A 502 12 HET NAG A 503 14 HET NAG A 504 14 HET NAG A 505 14 HET CL A 506 1 HETNAM SER SERINE HETNAM TYR TYROSINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION FORMUL 3 SER C3 H7 N O3 FORMUL 4 TYR C9 H11 N O3 FORMUL 5 NAG 3(C8 H15 N O6) FORMUL 8 CL CL 1- FORMUL 9 HOH *331(H2 O) HELIX 1 1 THR A 7 LEU A 12 1 6 HELIX 2 2 ASN A 29 MET A 33 5 5 HELIX 3 3 SER A 233 THR A 251 1 19 HELIX 4 4 SER A 260 SER A 268 1 9 HELIX 5 5 GLN A 272 GLY A 276 5 5 HELIX 6 6 PHE A 278 ALA A 283 1 6 HELIX 7 7 GLY A 284 PHE A 290 1 7 HELIX 8 8 GLU A 294 PHE A 298 5 5 HELIX 9 9 ASN A 332 GLY A 344 1 13 HELIX 10 10 TYR A 353 TYR A 359 5 7 SHEET 1 A12 TYR A 75 GLU A 86 0 SHEET 2 A12 LYS A 89 THR A 97 -1 O TYR A 93 N LYS A 82 SHEET 3 A12 TRP A 110 LYS A 117 -1 O LYS A 117 N ASN A 95 SHEET 4 A12 TYR A 75 GLU A 86 0 SHEET 5 A12 GLY A 67 LEU A 72 -1 N ILE A 70 O TRP A 77 SHEET 6 A12 SER A 57 ILE A 63 -1 N ILE A 63 O GLY A 67 SHEET 7 A12 THR A 49 TYR A 51 -1 N ALA A 50 O GLY A 58 SHEET 8 A12 GLN A 36 GLN A 45 -1 N TYR A 43 O TYR A 51 SHEET 9 A12 GLY A 13 SER A 24 -1 N PHE A 17 O VAL A 40 SHEET 10 A12 TRP A 110 LYS A 117 -1 O TRP A 110 N SER A 24 SHEET 11 A12 GLY A 100 ASP A 104 -1 N GLY A 100 O PHE A 113 SHEET 12 A12 TRP A 110 LYS A 117 -1 O PHE A 113 N GLY A 100 SHEET 1 B 3 TRP A 211 ASP A 212 0 SHEET 2 B 3 MET A 346 PHE A 350 -1 SHEET 1 C 5 TRP A 211 ASP A 212 0 SHEET 2 C 5 ILE A 363 TYR A 364 1 SHEET 1 D 2 SER A 318 TYR A 323 0 SSBOND 1 CYS A 6 CYS A 94 1555 1555 2.05 SSBOND 2 CYS A 30 CYS A 112 1555 1555 2.03 SSBOND 3 CYS A 231 CYS A 274 1555 1555 2.07 SSBOND 4 CYS A 267 CYS A 307 1555 1555 2.04 SSBOND 5 CYS A 297 CYS A 313 1555 1555 2.05 LINK SG CYS A 234 C TYR A 502 1555 1555 1.78 LINK C SER A 501 N TYR A 502 1555 1555 1.37 CISPEP 1 LYS A 46 LEU A 47 0 1.17 CRYST1 85.520 89.258 115.342 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011693 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011203 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008670 0.00000