data_4OEP # _entry.id 4OEP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4OEP RCSB RCSB084398 WWPDB D_1000084398 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4OEO 'The same protein unliganded' unspecified PDB 4OEQ . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4OEP _pdbx_database_status.recvd_initial_deposition_date 2014-01-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nomme, J.' 1 'Lavie, A.' 2 # _citation.id primary _citation.title 'Structural Basis of a Key Factor Regulating the Affinity between the Zonula Occludens First PDZ Domain and Claudins.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 290 _citation.page_first 16595 _citation.page_last 16606 _citation.year 2015 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26023235 _citation.pdbx_database_id_DOI 10.1074/jbc.M115.646695 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Nomme, J.' 1 primary 'Antanasijevic, A.' 2 primary 'Caffrey, M.' 3 primary 'Van Itallie, C.M.' 4 primary 'Anderson, J.M.' 5 primary 'Fanning, A.S.' 6 primary 'Lavie, A.' 7 # _cell.entry_id 4OEP _cell.length_a 106.203 _cell.length_b 106.203 _cell.length_c 53.985 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4OEP _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tight junction protein ZO-1' 11474.878 2 ? ? 'PDZ1 domain, UNP residues 18-110' ? 2 non-polymer syn 'DODECAETHYLENE GLYCOL' 546.646 1 ? ? ? ? 3 non-polymer syn 'ACETATE ION' 59.044 2 ? ? ? ? 4 water nat water 18.015 43 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Tight junction protein 1, Zona occludens protein 1, Zonula occludens protein 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAFAVQ QLRKSGKNAKITIRRKKGGGSSGKDYV ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAFAVQ QLRKSGKNAKITIRRKKGGGSSGKDYV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ILE n 1 6 TRP n 1 7 GLU n 1 8 GLN n 1 9 HIS n 1 10 THR n 1 11 VAL n 1 12 THR n 1 13 LEU n 1 14 HIS n 1 15 ARG n 1 16 ALA n 1 17 PRO n 1 18 GLY n 1 19 PHE n 1 20 GLY n 1 21 PHE n 1 22 GLY n 1 23 ILE n 1 24 ALA n 1 25 ILE n 1 26 SER n 1 27 GLY n 1 28 GLY n 1 29 ARG n 1 30 ASP n 1 31 ASN n 1 32 PRO n 1 33 HIS n 1 34 PHE n 1 35 GLN n 1 36 SER n 1 37 GLY n 1 38 GLU n 1 39 THR n 1 40 SER n 1 41 ILE n 1 42 VAL n 1 43 ILE n 1 44 SER n 1 45 ASP n 1 46 VAL n 1 47 LEU n 1 48 LYS n 1 49 GLY n 1 50 GLY n 1 51 PRO n 1 52 ALA n 1 53 GLU n 1 54 GLY n 1 55 GLN n 1 56 LEU n 1 57 GLN n 1 58 GLU n 1 59 ASN n 1 60 ASP n 1 61 ARG n 1 62 VAL n 1 63 ALA n 1 64 MET n 1 65 VAL n 1 66 ASN n 1 67 GLY n 1 68 VAL n 1 69 SER n 1 70 MET n 1 71 ASP n 1 72 ASN n 1 73 VAL n 1 74 GLU n 1 75 HIS n 1 76 ALA n 1 77 PHE n 1 78 ALA n 1 79 VAL n 1 80 GLN n 1 81 GLN n 1 82 LEU n 1 83 ARG n 1 84 LYS n 1 85 SER n 1 86 GLY n 1 87 LYS n 1 88 ASN n 1 89 ALA n 1 90 LYS n 1 91 ILE n 1 92 THR n 1 93 ILE n 1 94 ARG n 1 95 ARG n 1 96 LYS n 1 97 LYS n 1 98 GLY n 1 99 GLY n 1 100 GLY n 1 101 SER n 1 102 SER n 1 103 GLY n 1 104 LYS n 1 105 ASP n 1 106 TYR n 1 107 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TJP1, ZO1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 DE3 C41' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET14b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ZO1_HUMAN _struct_ref.pdbx_db_accession Q07157 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAFAVQQLRK SGKNAKITIRRKK ; _struct_ref.pdbx_align_begin 18 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4OEP A 5 ? 97 ? Q07157 18 ? 110 ? 18 110 2 1 4OEP B 5 ? 97 ? Q07157 18 ? 110 ? 18 110 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4OEP GLY A 1 ? UNP Q07157 ? ? 'EXPRESSION TAG' 14 1 1 4OEP SER A 2 ? UNP Q07157 ? ? 'EXPRESSION TAG' 15 2 1 4OEP HIS A 3 ? UNP Q07157 ? ? 'EXPRESSION TAG' 16 3 1 4OEP MET A 4 ? UNP Q07157 ? ? 'EXPRESSION TAG' 17 4 1 4OEP GLY A 98 ? UNP Q07157 ? ? 'EXPRESSION TAG' 111 5 1 4OEP GLY A 99 ? UNP Q07157 ? ? 'EXPRESSION TAG' 112 6 1 4OEP GLY A 100 ? UNP Q07157 ? ? 'EXPRESSION TAG' 113 7 1 4OEP SER A 101 ? UNP Q07157 ? ? 'EXPRESSION TAG' 114 8 1 4OEP SER A 102 ? UNP Q07157 ? ? 'EXPRESSION TAG' 115 9 1 4OEP GLY A 103 ? UNP Q07157 ? ? 'EXPRESSION TAG' 116 10 1 4OEP LYS A 104 ? UNP Q07157 ? ? 'EXPRESSION TAG' 117 11 1 4OEP ASP A 105 ? UNP Q07157 ? ? 'EXPRESSION TAG' 118 12 1 4OEP TYR A 106 ? UNP Q07157 ? ? 'EXPRESSION TAG' 119 13 1 4OEP VAL A 107 ? UNP Q07157 ? ? 'EXPRESSION TAG' 120 14 2 4OEP GLY B 1 ? UNP Q07157 ? ? 'EXPRESSION TAG' 14 15 2 4OEP SER B 2 ? UNP Q07157 ? ? 'EXPRESSION TAG' 15 16 2 4OEP HIS B 3 ? UNP Q07157 ? ? 'EXPRESSION TAG' 16 17 2 4OEP MET B 4 ? UNP Q07157 ? ? 'EXPRESSION TAG' 17 18 2 4OEP GLY B 98 ? UNP Q07157 ? ? 'EXPRESSION TAG' 111 19 2 4OEP GLY B 99 ? UNP Q07157 ? ? 'EXPRESSION TAG' 112 20 2 4OEP GLY B 100 ? UNP Q07157 ? ? 'EXPRESSION TAG' 113 21 2 4OEP SER B 101 ? UNP Q07157 ? ? 'EXPRESSION TAG' 114 22 2 4OEP SER B 102 ? UNP Q07157 ? ? 'EXPRESSION TAG' 115 23 2 4OEP GLY B 103 ? UNP Q07157 ? ? 'EXPRESSION TAG' 116 24 2 4OEP LYS B 104 ? UNP Q07157 ? ? 'EXPRESSION TAG' 117 25 2 4OEP ASP B 105 ? UNP Q07157 ? ? 'EXPRESSION TAG' 118 26 2 4OEP TYR B 106 ? UNP Q07157 ? ? 'EXPRESSION TAG' 119 27 2 4OEP VAL B 107 ? UNP Q07157 ? ? 'EXPRESSION TAG' 120 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 12P non-polymer . 'DODECAETHYLENE GLYCOL' 'POLYETHYLENE GLYCOL PEG400' 'C24 H50 O13' 546.646 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4OEP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.32 _exptl_crystal.density_percent_sol 62.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '40% PEG2K MME, 0.1 M NaAc pH4.6, 0.2 M AmSO4, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2012-11-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator c111 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97856 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-G' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-G _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97856 # _reflns.entry_id 4OEP _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.35 _reflns.number_obs 13306 _reflns.number_all 13306 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rsym_value 0.058 _reflns.pdbx_netI_over_sigmaI 23.29 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.49 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.651 _reflns_shell.meanI_over_sigI_obs 3.41 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2056 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4OEP _refine.ls_number_reflns_obs 12530 _refine.ls_number_reflns_all 12530 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.766 _refine.ls_d_res_high 2.35 _refine.ls_percent_reflns_obs 98.67 _refine.ls_R_factor_obs 0.21437 _refine.ls_R_factor_R_work 0.21208 _refine.ls_R_factor_R_free 0.25632 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 651 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.933 _refine.B_iso_mean 47.888 _refine.aniso_B[1][1] 0.23 _refine.aniso_B[2][2] 0.23 _refine.aniso_B[3][3] -0.46 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.265 _refine.pdbx_overall_ESU_R_Free 0.222 _refine.overall_SU_ML 0.223 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 10.109 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.ls_R_factor_all ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1543 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 43 _refine_hist.number_atoms_total 1626 _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 19.766 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.012 0.019 ? 1606 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.688 1.942 ? 2151 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 7.221 5.000 ? 207 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 31.109 23.944 ? 71 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 17.525 15.000 ? 246 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20.936 15.000 ? 11 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.099 0.200 ? 228 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.006 0.021 ? 1225 ? 'X-RAY DIFFRACTION' r_mcbond_it 3.442 4.667 ? 838 ? 'X-RAY DIFFRACTION' r_mcangle_it 5.116 6.985 ? 1040 ? 'X-RAY DIFFRACTION' r_scbond_it 4.234 4.836 ? 768 ? 'X-RAY DIFFRACTION' r_long_range_B_refined 8.415 38.896 ? 2268 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.350 _refine_ls_shell.d_res_low 2.411 _refine_ls_shell.number_reflns_R_work 891 _refine_ls_shell.R_factor_R_work 0.382 _refine_ls_shell.percent_reflns_obs 98.00 _refine_ls_shell.R_factor_R_free 0.345 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 38 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4OEP _struct.title 'Crystal structure of the ZO-1 PDZ1 domain in complex with the 7-mer Claudin1 C-terminal tail' _struct.pdbx_descriptor 'Tight junction protein ZO-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OEP _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'MAGUK, PDZ1, SCAFFOLDING, CELL ADHESION, Claudin, tight junction assembly' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 74 ? LYS A 84 ? GLU A 87 LYS A 97 1 ? 11 HELX_P HELX_P2 2 GLU B 74 ? LYS B 84 ? GLU B 87 LYS B 97 1 ? 11 HELX_P HELX_P3 3 SER B 102 ? TYR B 106 ? SER B 115 TYR B 119 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 10 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 23 ? SER A 26 ? ILE A 36 SER A 39 A 2 ILE A 41 ? VAL A 46 ? ILE A 54 VAL A 59 A 3 ARG A 61 ? VAL A 65 ? ARG A 74 VAL A 78 A 4 ASN A 88 ? GLY A 98 ? ASN A 101 GLY A 111 A 5 MET A 4 ? HIS A 14 ? MET A 17 HIS A 27 A 6 ILE B 5 ? HIS B 14 ? ILE B 18 HIS B 27 A 7 ASN B 88 ? LYS B 97 ? ASN B 101 LYS B 110 A 8 ARG B 61 ? VAL B 65 ? ARG B 74 VAL B 78 A 9 ILE B 41 ? VAL B 46 ? ILE B 54 VAL B 59 A 10 ILE B 23 ? SER B 26 ? ILE B 36 SER B 39 B 1 VAL A 68 ? SER A 69 ? VAL A 81 SER A 82 B 2 ARG A 61 ? VAL A 65 ? ARG A 74 VAL A 78 B 3 ASN A 88 ? GLY A 98 ? ASN A 101 GLY A 111 B 4 MET A 4 ? HIS A 14 ? MET A 17 HIS A 27 B 5 ILE B 5 ? HIS B 14 ? ILE B 18 HIS B 27 B 6 ASN B 88 ? LYS B 97 ? ASN B 101 LYS B 110 B 7 ARG B 61 ? VAL B 65 ? ARG B 74 VAL B 78 B 8 VAL B 68 ? SER B 69 ? VAL B 81 SER B 82 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 24 ? N ALA A 37 O SER A 44 ? O SER A 57 A 2 3 N ILE A 41 ? N ILE A 54 O VAL A 62 ? O VAL A 75 A 3 4 N ALA A 63 ? N ALA A 76 O THR A 92 ? O THR A 105 A 4 5 O ALA A 89 ? O ALA A 102 N LEU A 13 ? N LEU A 26 A 5 6 N TRP A 6 ? N TRP A 19 O TRP B 6 ? O TRP B 19 A 6 7 N ILE B 5 ? N ILE B 18 O LYS B 97 ? O LYS B 110 A 7 8 O ARG B 94 ? O ARG B 107 N ARG B 61 ? N ARG B 74 A 8 9 O VAL B 62 ? O VAL B 75 N ILE B 41 ? N ILE B 54 A 9 10 O SER B 44 ? O SER B 57 N ALA B 24 ? N ALA B 37 B 1 2 O VAL A 68 ? O VAL A 81 N VAL A 65 ? N VAL A 78 B 2 3 N ALA A 63 ? N ALA A 76 O THR A 92 ? O THR A 105 B 3 4 O ALA A 89 ? O ALA A 102 N LEU A 13 ? N LEU A 26 B 4 5 N TRP A 6 ? N TRP A 19 O TRP B 6 ? O TRP B 19 B 5 6 N ILE B 5 ? N ILE B 18 O LYS B 97 ? O LYS B 110 B 6 7 O ARG B 94 ? O ARG B 107 N ARG B 61 ? N ARG B 74 B 7 8 N VAL B 65 ? N VAL B 78 O VAL B 68 ? O VAL B 81 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE 12P A 201' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE ACT A 202' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ACT A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 TRP A 6 ? TRP A 19 . ? 1_555 ? 2 AC1 9 GLU A 38 ? GLU A 51 . ? 1_555 ? 3 AC1 9 SER A 40 ? SER A 53 . ? 1_555 ? 4 AC1 9 ARG A 94 ? ARG A 107 . ? 1_555 ? 5 AC1 9 GLN B 8 ? GLN B 21 . ? 1_555 ? 6 AC1 9 GLU B 38 ? GLU B 51 . ? 1_555 ? 7 AC1 9 ALA B 63 ? ALA B 76 . ? 1_555 ? 8 AC1 9 ASP B 71 ? ASP B 84 . ? 1_555 ? 9 AC1 9 ARG B 94 ? ARG B 107 . ? 1_555 ? 10 AC2 3 ASN A 59 ? ASN A 72 . ? 1_555 ? 11 AC2 3 ARG A 61 ? ARG A 74 . ? 1_555 ? 12 AC2 3 HOH F . ? HOH A 306 . ? 1_555 ? 13 AC3 5 SER A 26 ? SER A 39 . ? 1_555 ? 14 AC3 5 HIS A 33 ? HIS A 46 . ? 1_555 ? 15 AC3 5 SER A 102 ? SER A 115 . ? 4_554 ? 16 AC3 5 GLY A 103 ? GLY A 116 . ? 4_554 ? 17 AC3 5 LYS A 104 ? LYS A 117 . ? 4_554 ? # _database_PDB_matrix.entry_id 4OEP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4OEP _atom_sites.fract_transf_matrix[1][1] 0.009416 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009416 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018524 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 14 ? ? ? A . n A 1 2 SER 2 15 ? ? ? A . n A 1 3 HIS 3 16 16 HIS HIS A . n A 1 4 MET 4 17 17 MET MET A . n A 1 5 ILE 5 18 18 ILE ILE A . n A 1 6 TRP 6 19 19 TRP TRP A . n A 1 7 GLU 7 20 20 GLU GLU A . n A 1 8 GLN 8 21 21 GLN GLN A . n A 1 9 HIS 9 22 22 HIS HIS A . n A 1 10 THR 10 23 23 THR THR A . n A 1 11 VAL 11 24 24 VAL VAL A . n A 1 12 THR 12 25 25 THR THR A . n A 1 13 LEU 13 26 26 LEU LEU A . n A 1 14 HIS 14 27 27 HIS HIS A . n A 1 15 ARG 15 28 28 ARG ARG A . n A 1 16 ALA 16 29 29 ALA ALA A . n A 1 17 PRO 17 30 30 PRO PRO A . n A 1 18 GLY 18 31 31 GLY GLY A . n A 1 19 PHE 19 32 32 PHE PHE A . n A 1 20 GLY 20 33 33 GLY GLY A . n A 1 21 PHE 21 34 34 PHE PHE A . n A 1 22 GLY 22 35 35 GLY GLY A . n A 1 23 ILE 23 36 36 ILE ILE A . n A 1 24 ALA 24 37 37 ALA ALA A . n A 1 25 ILE 25 38 38 ILE ILE A . n A 1 26 SER 26 39 39 SER SER A . n A 1 27 GLY 27 40 40 GLY GLY A . n A 1 28 GLY 28 41 41 GLY GLY A . n A 1 29 ARG 29 42 42 ARG ARG A . n A 1 30 ASP 30 43 43 ASP ASP A . n A 1 31 ASN 31 44 44 ASN ASN A . n A 1 32 PRO 32 45 45 PRO PRO A . n A 1 33 HIS 33 46 46 HIS HIS A . n A 1 34 PHE 34 47 47 PHE PHE A . n A 1 35 GLN 35 48 48 GLN ALA A . n A 1 36 SER 36 49 49 SER SER A . n A 1 37 GLY 37 50 50 GLY GLY A . n A 1 38 GLU 38 51 51 GLU GLU A . n A 1 39 THR 39 52 52 THR THR A . n A 1 40 SER 40 53 53 SER SER A . n A 1 41 ILE 41 54 54 ILE ILE A . n A 1 42 VAL 42 55 55 VAL VAL A . n A 1 43 ILE 43 56 56 ILE ILE A . n A 1 44 SER 44 57 57 SER SER A . n A 1 45 ASP 45 58 58 ASP ASP A . n A 1 46 VAL 46 59 59 VAL VAL A . n A 1 47 LEU 47 60 60 LEU LEU A . n A 1 48 LYS 48 61 61 LYS ALA A . n A 1 49 GLY 49 62 62 GLY GLY A . n A 1 50 GLY 50 63 63 GLY GLY A . n A 1 51 PRO 51 64 64 PRO PRO A . n A 1 52 ALA 52 65 65 ALA ALA A . n A 1 53 GLU 53 66 66 GLU GLU A . n A 1 54 GLY 54 67 67 GLY GLY A . n A 1 55 GLN 55 68 68 GLN GLN A . n A 1 56 LEU 56 69 69 LEU LEU A . n A 1 57 GLN 57 70 70 GLN GLN A . n A 1 58 GLU 58 71 71 GLU GLU A . n A 1 59 ASN 59 72 72 ASN ASN A . n A 1 60 ASP 60 73 73 ASP ASP A . n A 1 61 ARG 61 74 74 ARG ARG A . n A 1 62 VAL 62 75 75 VAL VAL A . n A 1 63 ALA 63 76 76 ALA ALA A . n A 1 64 MET 64 77 77 MET MET A . n A 1 65 VAL 65 78 78 VAL VAL A . n A 1 66 ASN 66 79 79 ASN ASN A . n A 1 67 GLY 67 80 80 GLY GLY A . n A 1 68 VAL 68 81 81 VAL VAL A . n A 1 69 SER 69 82 82 SER SER A . n A 1 70 MET 70 83 83 MET MET A . n A 1 71 ASP 71 84 84 ASP ASP A . n A 1 72 ASN 72 85 85 ASN ASN A . n A 1 73 VAL 73 86 86 VAL VAL A . n A 1 74 GLU 74 87 87 GLU GLU A . n A 1 75 HIS 75 88 88 HIS HIS A . n A 1 76 ALA 76 89 89 ALA ALA A . n A 1 77 PHE 77 90 90 PHE PHE A . n A 1 78 ALA 78 91 91 ALA ALA A . n A 1 79 VAL 79 92 92 VAL VAL A . n A 1 80 GLN 80 93 93 GLN ALA A . n A 1 81 GLN 81 94 94 GLN GLN A . n A 1 82 LEU 82 95 95 LEU LEU A . n A 1 83 ARG 83 96 96 ARG ARG A . n A 1 84 LYS 84 97 97 LYS LYS A . n A 1 85 SER 85 98 98 SER SER A . n A 1 86 GLY 86 99 99 GLY GLY A . n A 1 87 LYS 87 100 100 LYS LYS A . n A 1 88 ASN 88 101 101 ASN ASN A . n A 1 89 ALA 89 102 102 ALA ALA A . n A 1 90 LYS 90 103 103 LYS ALA A . n A 1 91 ILE 91 104 104 ILE ILE A . n A 1 92 THR 92 105 105 THR THR A . n A 1 93 ILE 93 106 106 ILE ILE A . n A 1 94 ARG 94 107 107 ARG ARG A . n A 1 95 ARG 95 108 108 ARG ARG A . n A 1 96 LYS 96 109 109 LYS LYS A . n A 1 97 LYS 97 110 110 LYS LYS A . n A 1 98 GLY 98 111 111 GLY GLY A . n A 1 99 GLY 99 112 112 GLY GLY A . n A 1 100 GLY 100 113 113 GLY GLY A . n A 1 101 SER 101 114 114 SER ALA A . n A 1 102 SER 102 115 115 SER SER A . n A 1 103 GLY 103 116 116 GLY GLY A . n A 1 104 LYS 104 117 117 LYS LYS A . n A 1 105 ASP 105 118 118 ASP ASP A . n A 1 106 TYR 106 119 119 TYR TYR A . n A 1 107 VAL 107 120 120 VAL VAL A . n B 1 1 GLY 1 14 ? ? ? B . n B 1 2 SER 2 15 ? ? ? B . n B 1 3 HIS 3 16 16 HIS HIS B . n B 1 4 MET 4 17 17 MET MET B . n B 1 5 ILE 5 18 18 ILE ILE B . n B 1 6 TRP 6 19 19 TRP TRP B . n B 1 7 GLU 7 20 20 GLU GLU B . n B 1 8 GLN 8 21 21 GLN GLN B . n B 1 9 HIS 9 22 22 HIS HIS B . n B 1 10 THR 10 23 23 THR THR B . n B 1 11 VAL 11 24 24 VAL VAL B . n B 1 12 THR 12 25 25 THR THR B . n B 1 13 LEU 13 26 26 LEU LEU B . n B 1 14 HIS 14 27 27 HIS ALA B . n B 1 15 ARG 15 28 28 ARG ARG B . n B 1 16 ALA 16 29 29 ALA ALA B . n B 1 17 PRO 17 30 30 PRO PRO B . n B 1 18 GLY 18 31 31 GLY GLY B . n B 1 19 PHE 19 32 32 PHE PHE B . n B 1 20 GLY 20 33 33 GLY GLY B . n B 1 21 PHE 21 34 34 PHE PHE B . n B 1 22 GLY 22 35 35 GLY GLY B . n B 1 23 ILE 23 36 36 ILE ILE B . n B 1 24 ALA 24 37 37 ALA ALA B . n B 1 25 ILE 25 38 38 ILE ILE B . n B 1 26 SER 26 39 39 SER SER B . n B 1 27 GLY 27 40 40 GLY GLY B . n B 1 28 GLY 28 41 41 GLY GLY B . n B 1 29 ARG 29 42 42 ARG ARG B . n B 1 30 ASP 30 43 43 ASP ASP B . n B 1 31 ASN 31 44 44 ASN ASN B . n B 1 32 PRO 32 45 45 PRO PRO B . n B 1 33 HIS 33 46 46 HIS HIS B . n B 1 34 PHE 34 47 47 PHE PHE B . n B 1 35 GLN 35 48 48 GLN ALA B . n B 1 36 SER 36 49 49 SER SER B . n B 1 37 GLY 37 50 50 GLY GLY B . n B 1 38 GLU 38 51 51 GLU GLU B . n B 1 39 THR 39 52 52 THR THR B . n B 1 40 SER 40 53 53 SER SER B . n B 1 41 ILE 41 54 54 ILE ILE B . n B 1 42 VAL 42 55 55 VAL VAL B . n B 1 43 ILE 43 56 56 ILE ILE B . n B 1 44 SER 44 57 57 SER SER B . n B 1 45 ASP 45 58 58 ASP ASP B . n B 1 46 VAL 46 59 59 VAL VAL B . n B 1 47 LEU 47 60 60 LEU LEU B . n B 1 48 LYS 48 61 61 LYS ALA B . n B 1 49 GLY 49 62 62 GLY GLY B . n B 1 50 GLY 50 63 63 GLY GLY B . n B 1 51 PRO 51 64 64 PRO PRO B . n B 1 52 ALA 52 65 65 ALA ALA B . n B 1 53 GLU 53 66 66 GLU GLU B . n B 1 54 GLY 54 67 67 GLY GLY B . n B 1 55 GLN 55 68 68 GLN GLN B . n B 1 56 LEU 56 69 69 LEU LEU B . n B 1 57 GLN 57 70 70 GLN GLN B . n B 1 58 GLU 58 71 71 GLU GLU B . n B 1 59 ASN 59 72 72 ASN ASN B . n B 1 60 ASP 60 73 73 ASP ASP B . n B 1 61 ARG 61 74 74 ARG ARG B . n B 1 62 VAL 62 75 75 VAL VAL B . n B 1 63 ALA 63 76 76 ALA ALA B . n B 1 64 MET 64 77 77 MET MET B . n B 1 65 VAL 65 78 78 VAL VAL B . n B 1 66 ASN 66 79 79 ASN ASN B . n B 1 67 GLY 67 80 80 GLY GLY B . n B 1 68 VAL 68 81 81 VAL VAL B . n B 1 69 SER 69 82 82 SER SER B . n B 1 70 MET 70 83 83 MET MET B . n B 1 71 ASP 71 84 84 ASP ASP B . n B 1 72 ASN 72 85 85 ASN ASN B . n B 1 73 VAL 73 86 86 VAL VAL B . n B 1 74 GLU 74 87 87 GLU GLU B . n B 1 75 HIS 75 88 88 HIS HIS B . n B 1 76 ALA 76 89 89 ALA ALA B . n B 1 77 PHE 77 90 90 PHE PHE B . n B 1 78 ALA 78 91 91 ALA ALA B . n B 1 79 VAL 79 92 92 VAL VAL B . n B 1 80 GLN 80 93 93 GLN GLN B . n B 1 81 GLN 81 94 94 GLN GLN B . n B 1 82 LEU 82 95 95 LEU LEU B . n B 1 83 ARG 83 96 96 ARG ALA B . n B 1 84 LYS 84 97 97 LYS LYS B . n B 1 85 SER 85 98 98 SER SER B . n B 1 86 GLY 86 99 99 GLY GLY B . n B 1 87 LYS 87 100 100 LYS ALA B . n B 1 88 ASN 88 101 101 ASN ASN B . n B 1 89 ALA 89 102 102 ALA ALA B . n B 1 90 LYS 90 103 103 LYS ALA B . n B 1 91 ILE 91 104 104 ILE ILE B . n B 1 92 THR 92 105 105 THR THR B . n B 1 93 ILE 93 106 106 ILE ILE B . n B 1 94 ARG 94 107 107 ARG ARG B . n B 1 95 ARG 95 108 108 ARG ARG B . n B 1 96 LYS 96 109 109 LYS LYS B . n B 1 97 LYS 97 110 110 LYS LYS B . n B 1 98 GLY 98 111 111 GLY GLY B . n B 1 99 GLY 99 112 112 GLY GLY B . n B 1 100 GLY 100 113 113 GLY GLY B . n B 1 101 SER 101 114 114 SER ALA B . n B 1 102 SER 102 115 115 SER SER B . n B 1 103 GLY 103 116 116 GLY GLY B . n B 1 104 LYS 104 117 117 LYS ALA B . n B 1 105 ASP 105 118 118 ASP ASP B . n B 1 106 TYR 106 119 119 TYR TYR B . n B 1 107 VAL 107 120 120 VAL VAL B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F 2 1 B,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-01-14 2 'Structure model' 1 1 2015-07-01 3 'Structure model' 1 2 2015-07-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.8.0049 ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH1 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 28 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 GLY _pdbx_validate_close_contact.auth_seq_id_2 99 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.03 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 TYR _pdbx_validate_rmsd_bond.auth_seq_id_1 119 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 VAL _pdbx_validate_rmsd_bond.auth_seq_id_2 120 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.593 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation 0.257 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA B TYR 119 ? ? C B TYR 119 ? ? N B VAL 120 ? ? 140.43 117.20 23.23 2.20 Y 2 1 O B TYR 119 ? ? C B TYR 119 ? ? N B VAL 120 ? ? 98.85 122.70 -23.85 1.60 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 44 ? ? -162.38 66.11 2 1 ASN A 72 ? ? 80.12 -4.07 3 1 ASN A 79 ? ? 28.78 66.95 4 1 GLU B 51 ? ? -38.18 123.57 5 1 GLU B 66 ? ? -34.35 131.89 6 1 ASN B 72 ? ? 79.86 -10.97 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 48 ? CG ? A GLN 35 CG 2 1 Y 1 A GLN 48 ? CD ? A GLN 35 CD 3 1 Y 1 A GLN 48 ? OE1 ? A GLN 35 OE1 4 1 Y 1 A GLN 48 ? NE2 ? A GLN 35 NE2 5 1 Y 1 A LYS 61 ? CG ? A LYS 48 CG 6 1 Y 1 A LYS 61 ? CD ? A LYS 48 CD 7 1 Y 1 A LYS 61 ? CE ? A LYS 48 CE 8 1 Y 1 A LYS 61 ? NZ ? A LYS 48 NZ 9 1 Y 1 A GLN 93 ? CG ? A GLN 80 CG 10 1 Y 1 A GLN 93 ? CD ? A GLN 80 CD 11 1 Y 1 A GLN 93 ? OE1 ? A GLN 80 OE1 12 1 Y 1 A GLN 93 ? NE2 ? A GLN 80 NE2 13 1 Y 1 A LYS 103 ? CG ? A LYS 90 CG 14 1 Y 1 A LYS 103 ? CD ? A LYS 90 CD 15 1 Y 1 A LYS 103 ? CE ? A LYS 90 CE 16 1 Y 1 A LYS 103 ? NZ ? A LYS 90 NZ 17 1 Y 1 A SER 114 ? OG ? A SER 101 OG 18 1 Y 1 B HIS 27 ? CG ? B HIS 14 CG 19 1 Y 1 B HIS 27 ? ND1 ? B HIS 14 ND1 20 1 Y 1 B HIS 27 ? CD2 ? B HIS 14 CD2 21 1 Y 1 B HIS 27 ? CE1 ? B HIS 14 CE1 22 1 Y 1 B HIS 27 ? NE2 ? B HIS 14 NE2 23 1 Y 1 B GLN 48 ? CG ? B GLN 35 CG 24 1 Y 1 B GLN 48 ? CD ? B GLN 35 CD 25 1 Y 1 B GLN 48 ? OE1 ? B GLN 35 OE1 26 1 Y 1 B GLN 48 ? NE2 ? B GLN 35 NE2 27 1 Y 1 B LYS 61 ? CG ? B LYS 48 CG 28 1 Y 1 B LYS 61 ? CD ? B LYS 48 CD 29 1 Y 1 B LYS 61 ? CE ? B LYS 48 CE 30 1 Y 1 B LYS 61 ? NZ ? B LYS 48 NZ 31 1 Y 1 B ARG 96 ? CG ? B ARG 83 CG 32 1 Y 1 B ARG 96 ? CD ? B ARG 83 CD 33 1 Y 1 B ARG 96 ? NE ? B ARG 83 NE 34 1 Y 1 B ARG 96 ? CZ ? B ARG 83 CZ 35 1 Y 1 B ARG 96 ? NH1 ? B ARG 83 NH1 36 1 Y 1 B ARG 96 ? NH2 ? B ARG 83 NH2 37 1 Y 1 B LYS 100 ? CG ? B LYS 87 CG 38 1 Y 1 B LYS 100 ? CD ? B LYS 87 CD 39 1 Y 1 B LYS 100 ? CE ? B LYS 87 CE 40 1 Y 1 B LYS 100 ? NZ ? B LYS 87 NZ 41 1 Y 1 B LYS 103 ? CG ? B LYS 90 CG 42 1 Y 1 B LYS 103 ? CD ? B LYS 90 CD 43 1 Y 1 B LYS 103 ? CE ? B LYS 90 CE 44 1 Y 1 B LYS 103 ? NZ ? B LYS 90 NZ 45 1 Y 1 B SER 114 ? OG ? B SER 101 OG 46 1 Y 1 B LYS 117 ? CG ? B LYS 104 CG 47 1 Y 1 B LYS 117 ? CD ? B LYS 104 CD 48 1 Y 1 B LYS 117 ? CE ? B LYS 104 CE 49 1 Y 1 B LYS 117 ? NZ ? B LYS 104 NZ 50 1 N 1 A 12P 201 ? O37 ? C 12P 1 O37 51 1 N 1 A 12P 201 ? C36 ? C 12P 1 C36 52 1 N 1 A 12P 201 ? C3 ? C 12P 1 C3 53 1 N 1 A 12P 201 ? C2 ? C 12P 1 C2 54 1 N 1 A 12P 201 ? O1 ? C 12P 1 O1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 14 ? A GLY 1 2 1 Y 1 A SER 15 ? A SER 2 3 1 Y 1 B GLY 14 ? B GLY 1 4 1 Y 1 B SER 15 ? B SER 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DODECAETHYLENE GLYCOL' 12P 3 'ACETATE ION' ACT 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 12P 1 201 1 12P DRG A . D 3 ACT 1 202 1 ACT ACT A . E 3 ACT 1 203 2 ACT ACT A . F 4 HOH 1 301 1 HOH HOH A . F 4 HOH 2 302 3 HOH HOH A . F 4 HOH 3 303 4 HOH HOH A . F 4 HOH 4 304 9 HOH HOH A . F 4 HOH 5 305 10 HOH HOH A . F 4 HOH 6 306 11 HOH HOH A . F 4 HOH 7 307 13 HOH HOH A . F 4 HOH 8 308 20 HOH HOH A . F 4 HOH 9 309 21 HOH HOH A . F 4 HOH 10 310 23 HOH HOH A . F 4 HOH 11 311 24 HOH HOH A . F 4 HOH 12 312 25 HOH HOH A . F 4 HOH 13 313 26 HOH HOH A . F 4 HOH 14 314 27 HOH HOH A . F 4 HOH 15 315 28 HOH HOH A . F 4 HOH 16 316 31 HOH HOH A . F 4 HOH 17 317 39 HOH HOH A . F 4 HOH 18 318 43 HOH HOH A . G 4 HOH 1 201 2 HOH HOH B . G 4 HOH 2 202 5 HOH HOH B . G 4 HOH 3 203 6 HOH HOH B . G 4 HOH 4 204 7 HOH HOH B . G 4 HOH 5 205 8 HOH HOH B . G 4 HOH 6 206 12 HOH HOH B . G 4 HOH 7 207 14 HOH HOH B . G 4 HOH 8 208 15 HOH HOH B . G 4 HOH 9 209 16 HOH HOH B . G 4 HOH 10 210 17 HOH HOH B . G 4 HOH 11 211 18 HOH HOH B . G 4 HOH 12 212 19 HOH HOH B . G 4 HOH 13 213 22 HOH HOH B . G 4 HOH 14 214 29 HOH HOH B . G 4 HOH 15 215 30 HOH HOH B . G 4 HOH 16 216 32 HOH HOH B . G 4 HOH 17 217 33 HOH HOH B . G 4 HOH 18 218 34 HOH HOH B . G 4 HOH 19 219 35 HOH HOH B . G 4 HOH 20 220 36 HOH HOH B . G 4 HOH 21 221 37 HOH HOH B . G 4 HOH 22 222 38 HOH HOH B . G 4 HOH 23 223 40 HOH HOH B . G 4 HOH 24 224 41 HOH HOH B . G 4 HOH 25 225 42 HOH HOH B . #