HEADER CELL ADHESION 14-JAN-14 4OF3 TITLE CRYSTAL STRUCTURE OF SYG-1 D1-D2, GLYCOSYLATED COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN SYG-1, ISOFORM B; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: D1-D2, UNP RESIDUES 19-282; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_COMMON: NEMATODE; SOURCE 4 ORGANISM_TAXID: 6239; SOURCE 5 GENE: CELE_K02E10.8, K02E10.8, SYG-1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HIGH FIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS IMMUNOGLOBULIN SUPERFAMILY, CELL ADHESION, SYNAPTOGENESIS, PROTEIN KEYWDS 2 BINDING, N-LINKED GLYCOSYLATION, MEMBRANE, EXTRACELLULAR, SIGNALING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.OZKAN,K.C.GARCIA REVDAT 3 20-SEP-23 4OF3 1 HETSYN REVDAT 2 29-JUL-20 4OF3 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 19-FEB-14 4OF3 0 JRNL AUTH E.OZKAN,P.H.CHIA,R.R.WANG,N.GORIATCHEVA,D.BOREK, JRNL AUTH 2 Z.OTWINOWSKI,T.WALZ,K.SHEN,K.C.GARCIA JRNL TITL EXTRACELLULAR ARCHITECTURE OF THE SYG-1/SYG-2 ADHESION JRNL TITL 2 COMPLEX INSTRUCTS SYNAPTOGENESIS. JRNL REF CELL(CAMBRIDGE,MASS.) V. 156 482 2014 JRNL REFN ISSN 0092-8674 JRNL PMID 24485456 JRNL DOI 10.1016/J.CELL.2014.01.004 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 22690 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1164 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.6053 - 4.9938 0.98 2797 147 0.1894 0.2187 REMARK 3 2 4.9938 - 3.9645 1.00 2741 131 0.1512 0.2026 REMARK 3 3 3.9645 - 3.4636 1.00 2690 144 0.1960 0.2549 REMARK 3 4 3.4636 - 3.1471 1.00 2663 164 0.2273 0.3082 REMARK 3 5 3.1471 - 2.9215 1.00 2675 139 0.2437 0.3060 REMARK 3 6 2.9215 - 2.7493 1.00 2684 129 0.2399 0.3731 REMARK 3 7 2.7493 - 2.6116 1.00 2661 134 0.2569 0.2786 REMARK 3 8 2.6116 - 2.5000 1.00 2615 176 0.2755 0.3571 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 66.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3759 REMARK 3 ANGLE : 1.076 5104 REMARK 3 CHIRALITY : 0.044 610 REMARK 3 PLANARITY : 0.006 642 REMARK 3 DIHEDRAL : 12.618 1414 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 21 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.7411 11.7559 -43.9053 REMARK 3 T TENSOR REMARK 3 T11: 0.3625 T22: 0.6252 REMARK 3 T33: 0.4767 T12: 0.0153 REMARK 3 T13: 0.0787 T23: 0.0991 REMARK 3 L TENSOR REMARK 3 L11: 1.4617 L22: 6.0216 REMARK 3 L33: 5.4638 L12: 0.5314 REMARK 3 L13: -0.1004 L23: 0.1573 REMARK 3 S TENSOR REMARK 3 S11: -0.2090 S12: 0.2696 S13: -0.0250 REMARK 3 S21: -0.3514 S22: 0.3742 S23: 0.1941 REMARK 3 S31: -0.1301 S32: -0.4337 S33: -0.1838 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.6590 9.9760 -8.8591 REMARK 3 T TENSOR REMARK 3 T11: 0.8182 T22: 0.5680 REMARK 3 T33: 0.7093 T12: -0.1483 REMARK 3 T13: -0.0947 T23: 0.1049 REMARK 3 L TENSOR REMARK 3 L11: 1.8898 L22: 3.2090 REMARK 3 L33: 6.3037 L12: -0.4393 REMARK 3 L13: 1.9786 L23: -0.2826 REMARK 3 S TENSOR REMARK 3 S11: -0.2947 S12: -0.0951 S13: 0.5639 REMARK 3 S21: 0.7798 S22: -0.3754 S23: -0.7794 REMARK 3 S31: -0.7579 S32: 0.5967 S33: 0.4921 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 268 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1318 5.2500 -6.3469 REMARK 3 T TENSOR REMARK 3 T11: 0.6319 T22: 0.4261 REMARK 3 T33: 0.6120 T12: -0.1479 REMARK 3 T13: -0.1168 T23: 0.0489 REMARK 3 L TENSOR REMARK 3 L11: 3.9106 L22: 4.2390 REMARK 3 L33: 9.3464 L12: 0.2545 REMARK 3 L13: 0.3153 L23: -0.9595 REMARK 3 S TENSOR REMARK 3 S11: 0.1098 S12: -0.1728 S13: -0.0869 REMARK 3 S21: 0.6774 S22: -0.4202 S23: -0.7209 REMARK 3 S31: 0.0475 S32: 0.4919 S33: 0.3028 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 21 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0467 12.5860 -41.3401 REMARK 3 T TENSOR REMARK 3 T11: 0.4919 T22: 0.5681 REMARK 3 T33: 0.5733 T12: -0.0721 REMARK 3 T13: -0.0600 T23: 0.0962 REMARK 3 L TENSOR REMARK 3 L11: 4.6487 L22: 9.1145 REMARK 3 L33: 8.4938 L12: -3.3304 REMARK 3 L13: 2.4103 L23: -4.8567 REMARK 3 S TENSOR REMARK 3 S11: -0.3388 S12: -0.3365 S13: -0.2055 REMARK 3 S21: 1.2827 S22: 0.3837 S23: -0.0672 REMARK 3 S31: -0.7336 S32: 0.4982 S33: -0.0606 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 120 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.4453 12.9790 -78.2963 REMARK 3 T TENSOR REMARK 3 T11: 0.5042 T22: 0.3546 REMARK 3 T33: 0.5085 T12: 0.0149 REMARK 3 T13: -0.0463 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 3.0332 L22: 3.4069 REMARK 3 L33: 6.2233 L12: -0.6793 REMARK 3 L13: 2.5272 L23: -0.8347 REMARK 3 S TENSOR REMARK 3 S11: -0.1220 S12: 0.0721 S13: -0.1953 REMARK 3 S21: -0.5859 S22: -0.0825 S23: 0.3566 REMARK 3 S31: 0.2251 S32: -0.2485 S33: 0.2183 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 187 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.6778 11.1332 -79.1961 REMARK 3 T TENSOR REMARK 3 T11: 0.5466 T22: 0.3559 REMARK 3 T33: 0.4192 T12: 0.0269 REMARK 3 T13: -0.0531 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 4.8967 L22: 6.6861 REMARK 3 L33: 5.9833 L12: 0.7243 REMARK 3 L13: -1.2881 L23: 0.2271 REMARK 3 S TENSOR REMARK 3 S11: 0.0376 S12: 0.0620 S13: -0.3900 REMARK 3 S21: -0.5128 S22: -0.2556 S23: 0.1862 REMARK 3 S31: 0.8160 S32: -0.1402 S33: 0.1812 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OF3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22777 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 25.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4OF0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 200, 5% PEG 3,000, 0.1 M MES REMARK 280 PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.00933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.00467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.00467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 86.00933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 905 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 911 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 16 REMARK 465 ASP A 17 REMARK 465 PRO A 18 REMARK 465 GLN A 19 REMARK 465 GLN A 20 REMARK 465 SER A 136 REMARK 465 HIS A 137 REMARK 465 HIS A 138 REMARK 465 GLY A 189 REMARK 465 ILE A 190 REMARK 465 HIS A 191 REMARK 465 ALA A 192 REMARK 465 LYS A 193 REMARK 465 PRO A 194 REMARK 465 GLU A 195 REMARK 465 ILE A 196 REMARK 465 SER A 197 REMARK 465 GLN A 198 REMARK 465 GLU A 213 REMARK 465 GLY A 214 REMARK 465 GLY A 215 REMARK 465 ASN A 216 REMARK 465 ASN A 217 REMARK 465 SER A 218 REMARK 465 ARG A 219 REMARK 465 GLU A 220 REMARK 465 ALA A 269 REMARK 465 PRO A 270 REMARK 465 GLN A 271 REMARK 465 ILE A 272 REMARK 465 ASN A 273 REMARK 465 LEU A 274 REMARK 465 THR A 275 REMARK 465 VAL A 276 REMARK 465 ALA A 277 REMARK 465 SER A 278 REMARK 465 LYS A 279 REMARK 465 LEU A 280 REMARK 465 PRO A 281 REMARK 465 LEU A 282 REMARK 465 HIS A 283 REMARK 465 HIS A 284 REMARK 465 HIS A 285 REMARK 465 HIS A 286 REMARK 465 HIS A 287 REMARK 465 HIS A 288 REMARK 465 HIS A 289 REMARK 465 ALA B 16 REMARK 465 ASP B 17 REMARK 465 PRO B 18 REMARK 465 GLN B 19 REMARK 465 GLN B 20 REMARK 465 HIS B 191 REMARK 465 ALA B 192 REMARK 465 LYS B 193 REMARK 465 PRO B 194 REMARK 465 GLU B 195 REMARK 465 ILE B 196 REMARK 465 SER B 197 REMARK 465 GLY B 214 REMARK 465 GLY B 215 REMARK 465 ASN B 216 REMARK 465 ASN B 217 REMARK 465 SER B 218 REMARK 465 ARG B 219 REMARK 465 GLU B 220 REMARK 465 TYR B 268 REMARK 465 ALA B 269 REMARK 465 PRO B 270 REMARK 465 GLN B 271 REMARK 465 ILE B 272 REMARK 465 ASN B 273 REMARK 465 LEU B 274 REMARK 465 THR B 275 REMARK 465 VAL B 276 REMARK 465 ALA B 277 REMARK 465 SER B 278 REMARK 465 LYS B 279 REMARK 465 LEU B 280 REMARK 465 PRO B 281 REMARK 465 LEU B 282 REMARK 465 HIS B 283 REMARK 465 HIS B 284 REMARK 465 HIS B 285 REMARK 465 HIS B 286 REMARK 465 HIS B 287 REMARK 465 HIS B 288 REMARK 465 HIS B 289 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 141 CG CD CE NZ REMARK 470 GLU A 199 CB CG CD OE1 OE2 REMARK 470 TYR A 268 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN B 198 CG CD OE1 NE2 REMARK 470 GLU B 213 CG CD OE1 OE2 REMARK 470 ARG B 267 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 110 -122.87 44.24 REMARK 500 HIS A 111 32.21 -81.82 REMARK 500 GLU A 182 31.50 -99.76 REMARK 500 ASP B 67 29.29 49.66 REMARK 500 ASP B 110 -122.19 45.84 REMARK 500 HIS B 111 38.21 -83.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OF0 RELATED DB: PDB REMARK 900 RELATED ID: 4OF6 RELATED DB: PDB REMARK 900 RELATED ID: 4OF7 RELATED DB: PDB REMARK 900 RELATED ID: 4OF8 RELATED DB: PDB REMARK 900 RELATED ID: 4OFD RELATED DB: PDB REMARK 900 RELATED ID: 4OFI RELATED DB: PDB REMARK 900 RELATED ID: 4OFK RELATED DB: PDB REMARK 900 RELATED ID: 4OFP RELATED DB: PDB REMARK 900 RELATED ID: 4OFY RELATED DB: PDB DBREF 4OF3 A 19 282 UNP B1Q236 B1Q236_CAEEL 19 282 DBREF 4OF3 B 19 282 UNP B1Q236 B1Q236_CAEEL 19 282 SEQADV 4OF3 ALA A 16 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 ASP A 17 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 PRO A 18 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS A 283 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS A 284 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS A 285 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS A 286 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS A 287 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS A 288 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS A 289 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 ALA B 16 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 ASP B 17 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 PRO B 18 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS B 283 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS B 284 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS B 285 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS B 286 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS B 287 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS B 288 UNP B1Q236 EXPRESSION TAG SEQADV 4OF3 HIS B 289 UNP B1Q236 EXPRESSION TAG SEQRES 1 A 274 ALA ASP PRO GLN GLN LEU GLN GLN ARG ILE VAL GLU ALA SEQRES 2 A 274 PRO LYS ASP THR LEU ALA ALA VAL GLY GLU THR ALA ILE SEQRES 3 A 274 LEU THR CYS ARG VAL GLU HIS GLN GLN GLY PRO VAL GLN SEQRES 4 A 274 TRP MET LYS ASP ASP PHE GLY LEU GLY THR ASP ARG ASP SEQRES 5 A 274 LYS PRO LEU PRO GLY ASN LYS ARG TYR ARG MET VAL GLY SEQRES 6 A 274 SER ALA ALA ASN GLY GLU TYR ASN LEU GLU ILE SER ASN SEQRES 7 A 274 VAL THR LEU PHE ASP ASP ASP ASP PHE ALA CYS GLN ILE SEQRES 8 A 274 SER GLU SER ASP HIS ALA LYS ALA VAL VAL SER SER LYS SEQRES 9 A 274 ALA LYS LEU THR VAL LEU VAL ARG PRO THR PRO PRO LYS SEQRES 10 A 274 ILE VAL LYS SER HIS HIS SER LEU LYS ALA ILE ALA GLY SEQRES 11 A 274 ASP PRO ILE THR GLN SER CYS LEU SER ARG LYS GLY LYS SEQRES 12 A 274 PRO PRO PRO THR ILE GLY TRP ALA ILE ALA SER ASP GLU SEQRES 13 A 274 HIS GLY LYS HIS ILE VAL SER TRP LEU GLY GLU SER ARG SEQRES 14 A 274 SER LYS PHE GLY GLY ILE HIS ALA LYS PRO GLU ILE SER SEQRES 15 A 274 GLN GLU THR VAL ILE ALA HIS VAL ASN GLU THR THR GLN SEQRES 16 A 274 VAL GLU GLU GLY GLY ASN ASN SER ARG GLU ASP SER SER SEQRES 17 A 274 ILE TYR SER ILE MET SER ASN LEU SER PHE ILE PRO ARG SEQRES 18 A 274 PRO GLU ASP ASP HIS LYS TYR LEU ILE CYS ILE SER GLN SEQRES 19 A 274 HIS MET THR PHE PRO ASN LYS ILE GLU VAL ASP SER VAL SEQRES 20 A 274 LYS LEU SER LEU ARG TYR ALA PRO GLN ILE ASN LEU THR SEQRES 21 A 274 VAL ALA SER LYS LEU PRO LEU HIS HIS HIS HIS HIS HIS SEQRES 22 A 274 HIS SEQRES 1 B 274 ALA ASP PRO GLN GLN LEU GLN GLN ARG ILE VAL GLU ALA SEQRES 2 B 274 PRO LYS ASP THR LEU ALA ALA VAL GLY GLU THR ALA ILE SEQRES 3 B 274 LEU THR CYS ARG VAL GLU HIS GLN GLN GLY PRO VAL GLN SEQRES 4 B 274 TRP MET LYS ASP ASP PHE GLY LEU GLY THR ASP ARG ASP SEQRES 5 B 274 LYS PRO LEU PRO GLY ASN LYS ARG TYR ARG MET VAL GLY SEQRES 6 B 274 SER ALA ALA ASN GLY GLU TYR ASN LEU GLU ILE SER ASN SEQRES 7 B 274 VAL THR LEU PHE ASP ASP ASP ASP PHE ALA CYS GLN ILE SEQRES 8 B 274 SER GLU SER ASP HIS ALA LYS ALA VAL VAL SER SER LYS SEQRES 9 B 274 ALA LYS LEU THR VAL LEU VAL ARG PRO THR PRO PRO LYS SEQRES 10 B 274 ILE VAL LYS SER HIS HIS SER LEU LYS ALA ILE ALA GLY SEQRES 11 B 274 ASP PRO ILE THR GLN SER CYS LEU SER ARG LYS GLY LYS SEQRES 12 B 274 PRO PRO PRO THR ILE GLY TRP ALA ILE ALA SER ASP GLU SEQRES 13 B 274 HIS GLY LYS HIS ILE VAL SER TRP LEU GLY GLU SER ARG SEQRES 14 B 274 SER LYS PHE GLY GLY ILE HIS ALA LYS PRO GLU ILE SER SEQRES 15 B 274 GLN GLU THR VAL ILE ALA HIS VAL ASN GLU THR THR GLN SEQRES 16 B 274 VAL GLU GLU GLY GLY ASN ASN SER ARG GLU ASP SER SER SEQRES 17 B 274 ILE TYR SER ILE MET SER ASN LEU SER PHE ILE PRO ARG SEQRES 18 B 274 PRO GLU ASP ASP HIS LYS TYR LEU ILE CYS ILE SER GLN SEQRES 19 B 274 HIS MET THR PHE PRO ASN LYS ILE GLU VAL ASP SER VAL SEQRES 20 B 274 LYS LEU SER LEU ARG TYR ALA PRO GLN ILE ASN LEU THR SEQRES 21 B 274 VAL ALA SER LYS LEU PRO LEU HIS HIS HIS HIS HIS HIS SEQRES 22 B 274 HIS MODRES 4OF3 ASN A 206 ASN GLYCOSYLATION SITE MODRES 4OF3 ASN B 93 ASN GLYCOSYLATION SITE MODRES 4OF3 ASN A 93 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET FUC C 3 10 HET NAG D 1 14 HET FUC D 2 10 HET NAG D 3 14 HET FUC D 4 10 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 6(C8 H15 N O6) FORMUL 3 FUC 3(C6 H12 O5) FORMUL 5 BMA C6 H12 O6 FORMUL 6 HOH *39(H2 O) HELIX 1 1 SER A 81 GLY A 85 5 5 HELIX 2 2 THR A 95 ASP A 99 5 5 HELIX 3 3 GLU A 182 PHE A 187 1 6 HELIX 4 4 ARG A 236 ASP A 240 5 5 HELIX 5 5 SER B 81 GLY B 85 5 5 HELIX 6 6 THR B 95 ASP B 99 5 5 HELIX 7 7 SER B 183 PHE B 187 5 5 HELIX 8 8 ARG B 236 ASP B 240 5 5 SHEET 1 A 2 ARG A 24 GLU A 27 0 SHEET 2 A 2 ARG A 45 GLU A 47 -1 O GLU A 47 N ARG A 24 SHEET 1 B 5 THR A 32 ALA A 35 0 SHEET 2 B 5 ALA A 120 LEU A 125 1 O LEU A 125 N ALA A 34 SHEET 3 B 5 ASP A 100 ILE A 106 -1 N PHE A 102 O ALA A 120 SHEET 4 B 5 VAL A 53 LYS A 57 -1 N MET A 56 O ALA A 103 SHEET 5 B 5 PHE A 60 GLY A 61 -1 O PHE A 60 N LYS A 57 SHEET 1 C 4 THR A 32 ALA A 35 0 SHEET 2 C 4 ALA A 120 LEU A 125 1 O LEU A 125 N ALA A 34 SHEET 3 C 4 ASP A 100 ILE A 106 -1 N PHE A 102 O ALA A 120 SHEET 4 C 4 VAL A 115 VAL A 116 -1 O VAL A 115 N ILE A 106 SHEET 1 D 3 ALA A 40 LEU A 42 0 SHEET 2 D 3 ASN A 88 ILE A 91 -1 O ILE A 91 N ALA A 40 SHEET 3 D 3 TYR A 76 VAL A 79 -1 N ARG A 77 O GLU A 90 SHEET 1 E 4 LYS A 132 ILE A 133 0 SHEET 2 E 4 ILE A 148 GLY A 157 -1 O LEU A 153 N LYS A 132 SHEET 3 E 4 TYR A 225 PHE A 233 -1 O LEU A 231 N GLN A 150 SHEET 4 E 4 ALA A 203 VAL A 211 -1 N GLN A 210 O SER A 226 SHEET 1 F 5 LEU A 140 ILE A 143 0 SHEET 2 F 5 GLU A 258 ARG A 267 1 O ARG A 267 N ALA A 142 SHEET 3 F 5 TYR A 243 GLN A 249 -1 N CYS A 246 O ASP A 260 SHEET 4 F 5 THR A 162 ALA A 168 -1 N ALA A 166 O ILE A 245 SHEET 5 F 5 ILE A 176 LEU A 180 -1 O VAL A 177 N ILE A 167 SHEET 1 G 2 ARG B 24 GLU B 27 0 SHEET 2 G 2 ARG B 45 GLU B 47 -1 O ARG B 45 N VAL B 26 SHEET 1 H 5 THR B 32 ALA B 35 0 SHEET 2 H 5 ALA B 120 LEU B 125 1 O LEU B 125 N ALA B 34 SHEET 3 H 5 ASP B 100 ILE B 106 -1 N ASP B 100 O LEU B 122 SHEET 4 H 5 VAL B 53 LYS B 57 -1 N MET B 56 O ALA B 103 SHEET 5 H 5 PHE B 60 GLY B 61 -1 O PHE B 60 N LYS B 57 SHEET 1 I 4 THR B 32 ALA B 35 0 SHEET 2 I 4 ALA B 120 LEU B 125 1 O LEU B 125 N ALA B 34 SHEET 3 I 4 ASP B 100 ILE B 106 -1 N ASP B 100 O LEU B 122 SHEET 4 I 4 VAL B 115 VAL B 116 -1 O VAL B 115 N ILE B 106 SHEET 1 J 3 ALA B 40 LEU B 42 0 SHEET 2 J 3 ASN B 88 ILE B 91 -1 O ILE B 91 N ALA B 40 SHEET 3 J 3 TYR B 76 VAL B 79 -1 N ARG B 77 O GLU B 90 SHEET 1 K 4 LYS B 132 ILE B 133 0 SHEET 2 K 4 ILE B 148 GLY B 157 -1 O LEU B 153 N LYS B 132 SHEET 3 K 4 TYR B 225 PHE B 233 -1 O TYR B 225 N GLY B 157 SHEET 4 K 4 ALA B 203 VAL B 211 -1 N ASN B 206 O ASN B 230 SHEET 1 L 5 SER B 139 ILE B 143 0 SHEET 2 L 5 ILE B 257 ARG B 267 1 O LYS B 263 N LEU B 140 SHEET 3 L 5 TYR B 243 GLN B 249 -1 N LEU B 244 O VAL B 262 SHEET 4 L 5 THR B 162 ALA B 168 -1 N ALA B 166 O ILE B 245 SHEET 5 L 5 ILE B 176 TRP B 179 -1 O SER B 178 N ILE B 167 SSBOND 1 CYS A 44 CYS A 104 1555 1555 2.03 SSBOND 2 CYS A 152 CYS A 246 1555 1555 2.03 SSBOND 3 CYS B 44 CYS B 104 1555 1555 2.04 SSBOND 4 CYS B 152 CYS B 246 1555 1555 2.02 LINK ND2 ASN A 93 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 206 C1 NAG D 1 1555 1555 1.42 LINK ND2 ASN B 93 C1 NAG E 1 1555 1555 1.43 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 3 1555 1555 1.44 LINK O3 NAG D 1 C1 FUC D 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 3 1555 1555 1.45 LINK O6 NAG D 1 C1 FUC D 4 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 CISPEP 1 LYS A 158 PRO A 159 0 -0.54 CISPEP 2 LYS B 158 PRO B 159 0 -5.81 CISPEP 3 GLY B 188 GLY B 189 0 -0.38 CRYST1 92.648 92.648 129.014 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010794 0.006232 0.000000 0.00000 SCALE2 0.000000 0.012463 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007751 0.00000