data_4OFE # _entry.id 4OFE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4OFE pdb_00004ofe 10.2210/pdb4ofe/pdb NDB NA2885 ? ? RCSB RCSB084423 ? ? WWPDB D_1000084423 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3IHO . unspecified PDB 4EA5 . unspecified PDB 4E9G . unspecified PDB 4E9E . unspecified PDB 4E9F . unspecified PDB 4EA4 . unspecified PDB 4OFA . unspecified PDB 4OFH . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4OFE _pdbx_database_status.recvd_initial_deposition_date 2014-01-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ouzon-Shubeita, H.' 1 'Lin, Y.-L.' 2 'Lee, S.' 3 # _citation.id primary _citation.title 'Structure of R468K/D560N MBD4 bound to G:T mispair DNA' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ouzon-Shubeita, H.' 1 ? primary 'Lin, Y.-L.' 2 ? primary 'Lee, S.' 3 ? # _cell.entry_id 4OFE _cell.length_a 41.722 _cell.length_b 55.605 _cell.length_c 104.245 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4OFE _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Methyl-CpG-binding domain protein 4' 22458.832 1 3.2.2.- R468K,D560N 'catalytic domain of MBD4' ? 2 polymer syn '12-mer DNA(T)' 3648.381 1 ? ? ? ? 3 polymer syn '12-mer DNA(G)' 3695.390 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 water nat water 18.015 133 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Methyl-CpG-binding endonuclease 1, Methyl-CpG-binding protein MBD4, Mismatch-specific DNA N-glycosylase' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFMALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNK TSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIF CVNEWKQVHPENHKLNKYHDWLWENHEKLSLS ; ;MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSEFMALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNK TSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIF CVNEWKQVHPENHKLNKYHDWLWENHEKLSLS ; A ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DA)(DG)(DC)(DG)(DT)(DG)(DC)(DA)(DG)(DC)' CCAGCGTGCAGC C ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DC)(DG)(DC)(DG)(DC)(DT)(DG)(DG)' GCTGCGCGCTGG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ALA n 1 23 SER n 1 24 MET n 1 25 THR n 1 26 GLY n 1 27 GLY n 1 28 GLN n 1 29 GLN n 1 30 MET n 1 31 GLY n 1 32 ARG n 1 33 GLY n 1 34 SER n 1 35 GLU n 1 36 PHE n 1 37 MET n 1 38 ALA n 1 39 LEU n 1 40 SER n 1 41 PRO n 1 42 PRO n 1 43 ARG n 1 44 ARG n 1 45 LYS n 1 46 ALA n 1 47 PHE n 1 48 LYS n 1 49 LYS n 1 50 TRP n 1 51 THR n 1 52 PRO n 1 53 PRO n 1 54 ARG n 1 55 SER n 1 56 PRO n 1 57 PHE n 1 58 ASN n 1 59 LEU n 1 60 VAL n 1 61 GLN n 1 62 GLU n 1 63 THR n 1 64 LEU n 1 65 PHE n 1 66 HIS n 1 67 ASP n 1 68 PRO n 1 69 TRP n 1 70 LYS n 1 71 LEU n 1 72 LEU n 1 73 ILE n 1 74 ALA n 1 75 THR n 1 76 ILE n 1 77 PHE n 1 78 LEU n 1 79 ASN n 1 80 LYS n 1 81 THR n 1 82 SER n 1 83 GLY n 1 84 LYS n 1 85 MET n 1 86 ALA n 1 87 ILE n 1 88 PRO n 1 89 VAL n 1 90 LEU n 1 91 TRP n 1 92 LYS n 1 93 PHE n 1 94 LEU n 1 95 GLU n 1 96 LYS n 1 97 TYR n 1 98 PRO n 1 99 SER n 1 100 ALA n 1 101 GLU n 1 102 VAL n 1 103 ALA n 1 104 ARG n 1 105 THR n 1 106 ALA n 1 107 ASP n 1 108 TRP n 1 109 ARG n 1 110 ASP n 1 111 VAL n 1 112 SER n 1 113 GLU n 1 114 LEU n 1 115 LEU n 1 116 LYS n 1 117 PRO n 1 118 LEU n 1 119 GLY n 1 120 LEU n 1 121 TYR n 1 122 ASP n 1 123 LEU n 1 124 ARG n 1 125 ALA n 1 126 LYS n 1 127 THR n 1 128 ILE n 1 129 VAL n 1 130 LYS n 1 131 PHE n 1 132 SER n 1 133 ASP n 1 134 GLU n 1 135 TYR n 1 136 LEU n 1 137 THR n 1 138 LYS n 1 139 GLN n 1 140 TRP n 1 141 LYS n 1 142 TYR n 1 143 PRO n 1 144 ILE n 1 145 GLU n 1 146 LEU n 1 147 HIS n 1 148 GLY n 1 149 ILE n 1 150 GLY n 1 151 LYS n 1 152 TYR n 1 153 GLY n 1 154 ASN n 1 155 ASP n 1 156 SER n 1 157 TYR n 1 158 ARG n 1 159 ILE n 1 160 PHE n 1 161 CYS n 1 162 VAL n 1 163 ASN n 1 164 GLU n 1 165 TRP n 1 166 LYS n 1 167 GLN n 1 168 VAL n 1 169 HIS n 1 170 PRO n 1 171 GLU n 1 172 ASN n 1 173 HIS n 1 174 LYS n 1 175 LEU n 1 176 ASN n 1 177 LYS n 1 178 TYR n 1 179 HIS n 1 180 ASP n 1 181 TRP n 1 182 LEU n 1 183 TRP n 1 184 GLU n 1 185 ASN n 1 186 HIS n 1 187 GLU n 1 188 LYS n 1 189 LEU n 1 190 SER n 1 191 LEU n 1 192 SER n 2 1 DC n 2 2 DC n 2 3 DA n 2 4 DG n 2 5 DC n 2 6 DG n 2 7 DT n 2 8 DG n 2 9 DC n 2 10 DA n 2 11 DG n 2 12 DC n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DC n 3 6 DG n 3 7 DC n 3 8 DG n 3 9 DC n 3 10 DT n 3 11 DG n 3 12 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'MBD4, MED1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pet28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'Nature substrate' 3 1 sample ? ? ? ? ? 'Nature substrate' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MBD4_HUMAN O95243 1 ;ALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPSAEVARTADWRDVSELLKP LGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS ; 426 ? 2 PDB 4OFE 4OFE 2 CCAGCGTGCAGC ? ? 3 PDB 4OFE 4OFE 3 GCTGCGCGCTGG ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4OFE A 38 ? 192 ? O95243 426 ? 580 ? 426 580 2 2 4OFE C 1 ? 12 ? 4OFE 1 ? 12 ? 1 12 3 3 4OFE D 1 ? 12 ? 4OFE 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4OFE MET A 1 ? UNP O95243 ? ? 'expression tag' 389 1 1 4OFE GLY A 2 ? UNP O95243 ? ? 'expression tag' 390 2 1 4OFE SER A 3 ? UNP O95243 ? ? 'expression tag' 391 3 1 4OFE SER A 4 ? UNP O95243 ? ? 'expression tag' 392 4 1 4OFE HIS A 5 ? UNP O95243 ? ? 'expression tag' 393 5 1 4OFE HIS A 6 ? UNP O95243 ? ? 'expression tag' 394 6 1 4OFE HIS A 7 ? UNP O95243 ? ? 'expression tag' 395 7 1 4OFE HIS A 8 ? UNP O95243 ? ? 'expression tag' 396 8 1 4OFE HIS A 9 ? UNP O95243 ? ? 'expression tag' 397 9 1 4OFE HIS A 10 ? UNP O95243 ? ? 'expression tag' 398 10 1 4OFE SER A 11 ? UNP O95243 ? ? 'expression tag' 399 11 1 4OFE SER A 12 ? UNP O95243 ? ? 'expression tag' 400 12 1 4OFE GLY A 13 ? UNP O95243 ? ? 'expression tag' 401 13 1 4OFE LEU A 14 ? UNP O95243 ? ? 'expression tag' 402 14 1 4OFE VAL A 15 ? UNP O95243 ? ? 'expression tag' 403 15 1 4OFE PRO A 16 ? UNP O95243 ? ? 'expression tag' 404 16 1 4OFE ARG A 17 ? UNP O95243 ? ? 'expression tag' 405 17 1 4OFE GLY A 18 ? UNP O95243 ? ? 'expression tag' 406 18 1 4OFE SER A 19 ? UNP O95243 ? ? 'expression tag' 407 19 1 4OFE HIS A 20 ? UNP O95243 ? ? 'expression tag' 408 20 1 4OFE MET A 21 ? UNP O95243 ? ? 'expression tag' 409 21 1 4OFE ALA A 22 ? UNP O95243 ? ? 'expression tag' 410 22 1 4OFE SER A 23 ? UNP O95243 ? ? 'expression tag' 411 23 1 4OFE MET A 24 ? UNP O95243 ? ? 'expression tag' 412 24 1 4OFE THR A 25 ? UNP O95243 ? ? 'expression tag' 413 25 1 4OFE GLY A 26 ? UNP O95243 ? ? 'expression tag' 414 26 1 4OFE GLY A 27 ? UNP O95243 ? ? 'expression tag' 415 27 1 4OFE GLN A 28 ? UNP O95243 ? ? 'expression tag' 416 28 1 4OFE GLN A 29 ? UNP O95243 ? ? 'expression tag' 417 29 1 4OFE MET A 30 ? UNP O95243 ? ? 'expression tag' 418 30 1 4OFE GLY A 31 ? UNP O95243 ? ? 'expression tag' 419 31 1 4OFE ARG A 32 ? UNP O95243 ? ? 'expression tag' 420 32 1 4OFE GLY A 33 ? UNP O95243 ? ? 'expression tag' 421 33 1 4OFE SER A 34 ? UNP O95243 ? ? 'expression tag' 422 34 1 4OFE GLU A 35 ? UNP O95243 ? ? 'expression tag' 423 35 1 4OFE PHE A 36 ? UNP O95243 ? ? 'expression tag' 424 36 1 4OFE MET A 37 ? UNP O95243 ? ? 'expression tag' 425 37 1 4OFE LYS A 80 ? UNP O95243 ARG 468 'engineered mutation' 468 38 1 4OFE ASN A 172 ? UNP O95243 ASP 560 'engineered mutation' 560 39 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4OFE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_percent_sol 39.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details '15% PEG1500, 0.1M MES at pH of 6.5, 0.2M Na Acetate., VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-07-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Asymmetric cut single crystal Si(220)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97648 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.3' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.3 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97648 # _reflns.entry_id 4OFE _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.15 _reflns.number_obs 13802 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4OFE _refine.ls_number_reflns_obs 12344 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.39 _refine.ls_d_res_high 2.15 _refine.ls_percent_reflns_obs 94.12 _refine.ls_R_factor_obs 0.14506 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14223 _refine.ls_R_factor_R_free 0.20153 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 647 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.B_iso_mean 28.328 _refine.aniso_B[1][1] 0.16 _refine.aniso_B[2][2] 0.06 _refine.aniso_B[3][3] -0.22 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 4E9G' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.173 _refine.overall_SU_ML 0.111 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.760 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1208 _refine_hist.pdbx_number_atoms_nucleic_acid 487 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 133 _refine_hist.number_atoms_total 1829 _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 33.39 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.011 0.017 ? 1796 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 1452 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.237 1.680 ? 2540 ? 'X-RAY DIFFRACTION' r_angle_other_deg 1.380 3.000 ? 3366 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.285 5.000 ? 141 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 30.807 23.729 ? 59 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.906 15.000 ? 217 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15.794 15.000 ? 5 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.075 0.200 ? 248 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.007 0.021 ? 1654 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 430 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 7.166 3.000 ? 3248 ? 'X-RAY DIFFRACTION' r_sphericity_free 33.636 5.000 ? 34 ? 'X-RAY DIFFRACTION' r_sphericity_bonded 19.656 5.000 ? 3247 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.149 _refine_ls_shell.d_res_low 2.205 _refine_ls_shell.number_reflns_R_work 812 _refine_ls_shell.R_factor_R_work 0.177 _refine_ls_shell.percent_reflns_obs 84.94 _refine_ls_shell.R_factor_R_free 0.285 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 45 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4OFE _struct.title ;Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding domain protein 4: Implications for roles of Arg468 in mismatch recognition and catalysis ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OFE _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, mismatch, thymine glycosylase, HYDROLASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 60 ? PHE A 65 ? VAL A 448 PHE A 453 1 ? 6 HELX_P HELX_P2 2 ASP A 67 ? LEU A 78 ? ASP A 455 LEU A 466 1 ? 12 HELX_P HELX_P3 3 SER A 82 ? TYR A 97 ? SER A 470 TYR A 485 1 ? 16 HELX_P HELX_P4 4 SER A 99 ? ARG A 104 ? SER A 487 ARG A 492 1 ? 6 HELX_P HELX_P5 5 ASP A 107 ? LYS A 116 ? ASP A 495 LYS A 504 1 ? 10 HELX_P HELX_P6 6 PRO A 117 ? GLY A 119 ? PRO A 505 GLY A 507 5 ? 3 HELX_P HELX_P7 7 LEU A 120 ? LYS A 138 ? LEU A 508 LYS A 526 1 ? 19 HELX_P HELX_P8 8 TYR A 142 ? LEU A 146 ? TYR A 530 LEU A 534 5 ? 5 HELX_P HELX_P9 9 GLY A 150 ? CYS A 161 ? GLY A 538 CYS A 549 1 ? 12 HELX_P HELX_P10 10 GLU A 164 ? VAL A 168 ? GLU A 552 VAL A 556 5 ? 5 HELX_P HELX_P11 11 ASN A 172 ? HIS A 186 ? ASN A 560 HIS A 574 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ILE 144 O ? ? ? 1_555 D MG . MG ? ? A ILE 532 A MG 601 1_555 ? ? ? ? ? ? ? 2.428 ? ? metalc2 metalc ? ? A LEU 146 O ? ? ? 1_555 D MG . MG ? ? A LEU 534 A MG 601 1_555 ? ? ? ? ? ? ? 2.413 ? ? metalc3 metalc ? ? A ILE 149 O ? ? ? 1_555 D MG . MG ? ? A ILE 537 A MG 601 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 601 A HOH 744 1_555 ? ? ? ? ? ? ? 2.558 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 B DA 10 OP1 ? ? A MG 601 C DA 10 1_555 ? ? ? ? ? ? ? 2.517 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 601 C HOH 117 1_555 ? ? ? ? ? ? ? 2.483 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 12 N1 ? ? C DC 1 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 12 O6 ? ? C DC 1 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 12 N2 ? ? C DC 1 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 11 N1 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 11 O6 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 11 N2 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 3 N1 ? ? ? 1_555 C DT 10 N3 ? ? C DA 3 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 3 N6 ? ? ? 1_555 C DT 10 O4 ? ? C DA 3 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 9 N3 ? ? C DG 4 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 9 O2 ? ? C DG 4 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 9 N4 ? ? C DG 4 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 8 N1 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 8 O6 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 8 N2 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 7 N3 ? ? C DG 6 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 7 O2 ? ? C DG 6 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 7 N4 ? ? C DG 6 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 5 N3 ? ? C DG 8 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 5 O2 ? ? C DG 8 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 5 N4 ? ? C DG 8 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 4 N1 ? ? C DC 9 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 4 O6 ? ? C DC 9 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 4 N2 ? ? C DC 9 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 3 N3 ? ? C DA 10 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 3 O4 ? ? C DA 10 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 2 N3 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 2 O2 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 2 N4 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 12 N3 ? ? ? 1_555 C DG 1 N1 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 12 N4 ? ? ? 1_555 C DG 1 O6 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 12 O2 ? ? ? 1_555 C DG 1 N2 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 601 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE MG A 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ILE A 144 ? ILE A 532 . ? 1_555 ? 2 AC1 6 LEU A 146 ? LEU A 534 . ? 1_555 ? 3 AC1 6 ILE A 149 ? ILE A 537 . ? 1_555 ? 4 AC1 6 HOH E . ? HOH A 744 . ? 1_555 ? 5 AC1 6 DA B 10 ? DA C 10 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH C 117 . ? 1_555 ? # _database_PDB_matrix.entry_id 4OFE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4OFE _atom_sites.fract_transf_matrix[1][1] 0.023968 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017984 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009593 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 389 ? ? ? A . n A 1 2 GLY 2 390 ? ? ? A . n A 1 3 SER 3 391 ? ? ? A . n A 1 4 SER 4 392 ? ? ? A . n A 1 5 HIS 5 393 ? ? ? A . n A 1 6 HIS 6 394 ? ? ? A . n A 1 7 HIS 7 395 ? ? ? A . n A 1 8 HIS 8 396 ? ? ? A . n A 1 9 HIS 9 397 ? ? ? A . n A 1 10 HIS 10 398 ? ? ? A . n A 1 11 SER 11 399 ? ? ? A . n A 1 12 SER 12 400 ? ? ? A . n A 1 13 GLY 13 401 ? ? ? A . n A 1 14 LEU 14 402 ? ? ? A . n A 1 15 VAL 15 403 ? ? ? A . n A 1 16 PRO 16 404 ? ? ? A . n A 1 17 ARG 17 405 ? ? ? A . n A 1 18 GLY 18 406 ? ? ? A . n A 1 19 SER 19 407 ? ? ? A . n A 1 20 HIS 20 408 ? ? ? A . n A 1 21 MET 21 409 ? ? ? A . n A 1 22 ALA 22 410 ? ? ? A . n A 1 23 SER 23 411 ? ? ? A . n A 1 24 MET 24 412 ? ? ? A . n A 1 25 THR 25 413 ? ? ? A . n A 1 26 GLY 26 414 ? ? ? A . n A 1 27 GLY 27 415 ? ? ? A . n A 1 28 GLN 28 416 ? ? ? A . n A 1 29 GLN 29 417 ? ? ? A . n A 1 30 MET 30 418 ? ? ? A . n A 1 31 GLY 31 419 ? ? ? A . n A 1 32 ARG 32 420 ? ? ? A . n A 1 33 GLY 33 421 ? ? ? A . n A 1 34 SER 34 422 ? ? ? A . n A 1 35 GLU 35 423 ? ? ? A . n A 1 36 PHE 36 424 ? ? ? A . n A 1 37 MET 37 425 ? ? ? A . n A 1 38 ALA 38 426 ? ? ? A . n A 1 39 LEU 39 427 ? ? ? A . n A 1 40 SER 40 428 ? ? ? A . n A 1 41 PRO 41 429 ? ? ? A . n A 1 42 PRO 42 430 ? ? ? A . n A 1 43 ARG 43 431 ? ? ? A . n A 1 44 ARG 44 432 ? ? ? A . n A 1 45 LYS 45 433 ? ? ? A . n A 1 46 ALA 46 434 ? ? ? A . n A 1 47 PHE 47 435 ? ? ? A . n A 1 48 LYS 48 436 ? ? ? A . n A 1 49 LYS 49 437 ? ? ? A . n A 1 50 TRP 50 438 438 TRP TRP A . n A 1 51 THR 51 439 439 THR THR A . n A 1 52 PRO 52 440 440 PRO PRO A . n A 1 53 PRO 53 441 441 PRO PRO A . n A 1 54 ARG 54 442 442 ARG ARG A . n A 1 55 SER 55 443 443 SER SER A . n A 1 56 PRO 56 444 444 PRO PRO A . n A 1 57 PHE 57 445 445 PHE PHE A . n A 1 58 ASN 58 446 446 ASN ASN A . n A 1 59 LEU 59 447 447 LEU LEU A . n A 1 60 VAL 60 448 448 VAL VAL A . n A 1 61 GLN 61 449 449 GLN GLN A . n A 1 62 GLU 62 450 450 GLU GLU A . n A 1 63 THR 63 451 451 THR THR A . n A 1 64 LEU 64 452 452 LEU LEU A . n A 1 65 PHE 65 453 453 PHE PHE A . n A 1 66 HIS 66 454 454 HIS HIS A . n A 1 67 ASP 67 455 455 ASP ASP A . n A 1 68 PRO 68 456 456 PRO PRO A . n A 1 69 TRP 69 457 457 TRP TRP A . n A 1 70 LYS 70 458 458 LYS LYS A . n A 1 71 LEU 71 459 459 LEU LEU A . n A 1 72 LEU 72 460 460 LEU LEU A . n A 1 73 ILE 73 461 461 ILE ILE A . n A 1 74 ALA 74 462 462 ALA ALA A . n A 1 75 THR 75 463 463 THR THR A . n A 1 76 ILE 76 464 464 ILE ILE A . n A 1 77 PHE 77 465 465 PHE PHE A . n A 1 78 LEU 78 466 466 LEU LEU A . n A 1 79 ASN 79 467 467 ASN ASN A . n A 1 80 LYS 80 468 468 LYS LYS A . n A 1 81 THR 81 469 469 THR THR A . n A 1 82 SER 82 470 470 SER SER A . n A 1 83 GLY 83 471 471 GLY GLY A . n A 1 84 LYS 84 472 472 LYS LYS A . n A 1 85 MET 85 473 473 MET MET A . n A 1 86 ALA 86 474 474 ALA ALA A . n A 1 87 ILE 87 475 475 ILE ILE A . n A 1 88 PRO 88 476 476 PRO PRO A . n A 1 89 VAL 89 477 477 VAL VAL A . n A 1 90 LEU 90 478 478 LEU LEU A . n A 1 91 TRP 91 479 479 TRP TRP A . n A 1 92 LYS 92 480 480 LYS LYS A . n A 1 93 PHE 93 481 481 PHE PHE A . n A 1 94 LEU 94 482 482 LEU LEU A . n A 1 95 GLU 95 483 483 GLU GLU A . n A 1 96 LYS 96 484 484 LYS LYS A . n A 1 97 TYR 97 485 485 TYR TYR A . n A 1 98 PRO 98 486 486 PRO PRO A . n A 1 99 SER 99 487 487 SER SER A . n A 1 100 ALA 100 488 488 ALA ALA A . n A 1 101 GLU 101 489 489 GLU GLU A . n A 1 102 VAL 102 490 490 VAL VAL A . n A 1 103 ALA 103 491 491 ALA ALA A . n A 1 104 ARG 104 492 492 ARG ARG A . n A 1 105 THR 105 493 493 THR THR A . n A 1 106 ALA 106 494 494 ALA ALA A . n A 1 107 ASP 107 495 495 ASP ASP A . n A 1 108 TRP 108 496 496 TRP TRP A . n A 1 109 ARG 109 497 497 ARG ARG A . n A 1 110 ASP 110 498 498 ASP ASP A . n A 1 111 VAL 111 499 499 VAL VAL A . n A 1 112 SER 112 500 500 SER SER A . n A 1 113 GLU 113 501 501 GLU GLU A . n A 1 114 LEU 114 502 502 LEU LEU A . n A 1 115 LEU 115 503 503 LEU LEU A . n A 1 116 LYS 116 504 504 LYS LYS A . n A 1 117 PRO 117 505 505 PRO PRO A . n A 1 118 LEU 118 506 506 LEU LEU A . n A 1 119 GLY 119 507 507 GLY GLY A . n A 1 120 LEU 120 508 508 LEU LEU A . n A 1 121 TYR 121 509 509 TYR TYR A . n A 1 122 ASP 122 510 510 ASP ASP A . n A 1 123 LEU 123 511 511 LEU LEU A . n A 1 124 ARG 124 512 512 ARG ARG A . n A 1 125 ALA 125 513 513 ALA ALA A . n A 1 126 LYS 126 514 514 LYS LYS A . n A 1 127 THR 127 515 515 THR THR A . n A 1 128 ILE 128 516 516 ILE ILE A . n A 1 129 VAL 129 517 517 VAL VAL A . n A 1 130 LYS 130 518 518 LYS LYS A . n A 1 131 PHE 131 519 519 PHE PHE A . n A 1 132 SER 132 520 520 SER SER A . n A 1 133 ASP 133 521 521 ASP ASP A . n A 1 134 GLU 134 522 522 GLU GLU A . n A 1 135 TYR 135 523 523 TYR TYR A . n A 1 136 LEU 136 524 524 LEU LEU A . n A 1 137 THR 137 525 525 THR THR A . n A 1 138 LYS 138 526 526 LYS LYS A . n A 1 139 GLN 139 527 527 GLN GLN A . n A 1 140 TRP 140 528 528 TRP TRP A . n A 1 141 LYS 141 529 529 LYS LYS A . n A 1 142 TYR 142 530 530 TYR TYR A . n A 1 143 PRO 143 531 531 PRO PRO A . n A 1 144 ILE 144 532 532 ILE ILE A . n A 1 145 GLU 145 533 533 GLU GLU A . n A 1 146 LEU 146 534 534 LEU LEU A . n A 1 147 HIS 147 535 535 HIS HIS A . n A 1 148 GLY 148 536 536 GLY GLY A . n A 1 149 ILE 149 537 537 ILE ILE A . n A 1 150 GLY 150 538 538 GLY GLY A . n A 1 151 LYS 151 539 539 LYS LYS A . n A 1 152 TYR 152 540 540 TYR TYR A . n A 1 153 GLY 153 541 541 GLY GLY A . n A 1 154 ASN 154 542 542 ASN ASN A . n A 1 155 ASP 155 543 543 ASP ASP A . n A 1 156 SER 156 544 544 SER SER A . n A 1 157 TYR 157 545 545 TYR TYR A . n A 1 158 ARG 158 546 546 ARG ARG A . n A 1 159 ILE 159 547 547 ILE ILE A . n A 1 160 PHE 160 548 548 PHE PHE A . n A 1 161 CYS 161 549 549 CYS CYS A . n A 1 162 VAL 162 550 550 VAL VAL A . n A 1 163 ASN 163 551 551 ASN ASN A . n A 1 164 GLU 164 552 552 GLU GLU A . n A 1 165 TRP 165 553 553 TRP TRP A . n A 1 166 LYS 166 554 554 LYS LYS A . n A 1 167 GLN 167 555 555 GLN GLN A . n A 1 168 VAL 168 556 556 VAL VAL A . n A 1 169 HIS 169 557 557 HIS HIS A . n A 1 170 PRO 170 558 558 PRO PRO A . n A 1 171 GLU 171 559 559 GLU GLU A . n A 1 172 ASN 172 560 560 ASN ASN A . n A 1 173 HIS 173 561 561 HIS HIS A . n A 1 174 LYS 174 562 562 LYS LYS A . n A 1 175 LEU 175 563 563 LEU LEU A . n A 1 176 ASN 176 564 564 ASN ASN A . n A 1 177 LYS 177 565 565 LYS LYS A . n A 1 178 TYR 178 566 566 TYR TYR A . n A 1 179 HIS 179 567 567 HIS HIS A . n A 1 180 ASP 180 568 568 ASP ASP A . n A 1 181 TRP 181 569 569 TRP TRP A . n A 1 182 LEU 182 570 570 LEU LEU A . n A 1 183 TRP 183 571 571 TRP TRP A . n A 1 184 GLU 184 572 572 GLU GLU A . n A 1 185 ASN 185 573 573 ASN ASN A . n A 1 186 HIS 186 574 574 HIS HIS A . n A 1 187 GLU 187 575 575 GLU GLU A . n A 1 188 LYS 188 576 576 LYS LYS A . n A 1 189 LEU 189 577 577 LEU LEU A . n A 1 190 SER 190 578 578 SER SER A . n A 1 191 LEU 191 579 579 LEU LEU A . n A 1 192 SER 192 580 ? ? ? A . n B 2 1 DC 1 1 1 DC DC C . n B 2 2 DC 2 2 2 DC DC C . n B 2 3 DA 3 3 3 DA DA C . n B 2 4 DG 4 4 4 DG DG C . n B 2 5 DC 5 5 5 DC DC C . n B 2 6 DG 6 6 6 DG DG C . n B 2 7 DT 7 7 7 DT DT C . n B 2 8 DG 8 8 8 DG DG C . n B 2 9 DC 9 9 9 DC DC C . n B 2 10 DA 10 10 10 DA DA C . n B 2 11 DG 11 11 11 DG DG C . n B 2 12 DC 12 12 12 DC DC C . n C 3 1 DG 1 1 1 DG DG D . n C 3 2 DC 2 2 2 DC DC D . n C 3 3 DT 3 3 3 DT DT D . n C 3 4 DG 4 4 4 DG DG D . n C 3 5 DC 5 5 5 DC DC D . n C 3 6 DG 6 6 6 DG DG D . n C 3 7 DC 7 7 7 DC DC D . n C 3 8 DG 8 8 8 DG DG D . n C 3 9 DC 9 9 9 DC DC D . n C 3 10 DT 10 10 10 DT DT D . n C 3 11 DG 11 11 11 DG DG D . n C 3 12 DG 12 12 12 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG 1 601 2 MG MG A . E 5 HOH 1 701 2 HOH HOH A . E 5 HOH 2 702 3 HOH HOH A . E 5 HOH 3 703 4 HOH HOH A . E 5 HOH 4 704 5 HOH HOH A . E 5 HOH 5 705 6 HOH HOH A . E 5 HOH 6 706 7 HOH HOH A . E 5 HOH 7 707 10 HOH HOH A . E 5 HOH 8 708 11 HOH HOH A . E 5 HOH 9 709 15 HOH HOH A . E 5 HOH 10 710 16 HOH HOH A . E 5 HOH 11 711 17 HOH HOH A . E 5 HOH 12 712 19 HOH HOH A . E 5 HOH 13 713 20 HOH HOH A . E 5 HOH 14 714 22 HOH HOH A . E 5 HOH 15 715 25 HOH HOH A . E 5 HOH 16 716 26 HOH HOH A . E 5 HOH 17 717 27 HOH HOH A . E 5 HOH 18 718 28 HOH HOH A . E 5 HOH 19 719 29 HOH HOH A . E 5 HOH 20 720 30 HOH HOH A . E 5 HOH 21 721 31 HOH HOH A . E 5 HOH 22 722 32 HOH HOH A . E 5 HOH 23 723 35 HOH HOH A . E 5 HOH 24 724 36 HOH HOH A . E 5 HOH 25 725 37 HOH HOH A . E 5 HOH 26 726 38 HOH HOH A . E 5 HOH 27 727 39 HOH HOH A . E 5 HOH 28 728 40 HOH HOH A . E 5 HOH 29 729 41 HOH HOH A . E 5 HOH 30 730 43 HOH HOH A . E 5 HOH 31 731 44 HOH HOH A . E 5 HOH 32 732 45 HOH HOH A . E 5 HOH 33 733 46 HOH HOH A . E 5 HOH 34 734 47 HOH HOH A . E 5 HOH 35 735 49 HOH HOH A . E 5 HOH 36 736 50 HOH HOH A . E 5 HOH 37 737 51 HOH HOH A . E 5 HOH 38 738 55 HOH HOH A . E 5 HOH 39 739 58 HOH HOH A . E 5 HOH 40 740 59 HOH HOH A . E 5 HOH 41 741 60 HOH HOH A . E 5 HOH 42 742 62 HOH HOH A . E 5 HOH 43 743 63 HOH HOH A . E 5 HOH 44 744 64 HOH HOH A . E 5 HOH 45 745 65 HOH HOH A . E 5 HOH 46 746 68 HOH HOH A . E 5 HOH 47 747 69 HOH HOH A . E 5 HOH 48 748 71 HOH HOH A . E 5 HOH 49 749 72 HOH HOH A . E 5 HOH 50 750 73 HOH HOH A . E 5 HOH 51 751 74 HOH HOH A . E 5 HOH 52 752 75 HOH HOH A . E 5 HOH 53 753 76 HOH HOH A . E 5 HOH 54 754 77 HOH HOH A . E 5 HOH 55 755 78 HOH HOH A . E 5 HOH 56 756 86 HOH HOH A . E 5 HOH 57 757 87 HOH HOH A . E 5 HOH 58 758 89 HOH HOH A . E 5 HOH 59 759 91 HOH HOH A . E 5 HOH 60 760 93 HOH HOH A . E 5 HOH 61 761 94 HOH HOH A . E 5 HOH 62 762 95 HOH HOH A . E 5 HOH 63 763 96 HOH HOH A . E 5 HOH 64 764 97 HOH HOH A . E 5 HOH 65 765 98 HOH HOH A . E 5 HOH 66 766 99 HOH HOH A . E 5 HOH 67 767 100 HOH HOH A . E 5 HOH 68 768 101 HOH HOH A . E 5 HOH 69 769 102 HOH HOH A . E 5 HOH 70 770 104 HOH HOH A . E 5 HOH 71 771 105 HOH HOH A . E 5 HOH 72 772 107 HOH HOH A . E 5 HOH 73 773 108 HOH HOH A . E 5 HOH 74 774 111 HOH HOH A . E 5 HOH 75 775 112 HOH HOH A . E 5 HOH 76 776 113 HOH HOH A . E 5 HOH 77 777 116 HOH HOH A . E 5 HOH 78 778 120 HOH HOH A . E 5 HOH 79 779 122 HOH HOH A . E 5 HOH 80 780 125 HOH HOH A . E 5 HOH 81 781 126 HOH HOH A . E 5 HOH 82 782 130 HOH HOH A . E 5 HOH 83 783 131 HOH HOH A . E 5 HOH 84 784 132 HOH HOH A . E 5 HOH 85 785 133 HOH HOH A . E 5 HOH 86 786 24 HOH HOH A . F 5 HOH 1 101 129 HOH HOH C . F 5 HOH 2 102 1 HOH HOH C . F 5 HOH 3 103 9 HOH HOH C . F 5 HOH 4 104 14 HOH HOH C . F 5 HOH 5 105 18 HOH HOH C . F 5 HOH 6 106 21 HOH HOH C . F 5 HOH 7 107 23 HOH HOH C . F 5 HOH 8 108 33 HOH HOH C . F 5 HOH 9 109 48 HOH HOH C . F 5 HOH 10 110 52 HOH HOH C . F 5 HOH 11 111 56 HOH HOH C . F 5 HOH 12 112 57 HOH HOH C . F 5 HOH 13 113 61 HOH HOH C . F 5 HOH 14 114 70 HOH HOH C . F 5 HOH 15 115 81 HOH HOH C . F 5 HOH 16 116 90 HOH HOH C . F 5 HOH 17 117 92 HOH HOH C . F 5 HOH 18 118 103 HOH HOH C . F 5 HOH 19 119 106 HOH HOH C . F 5 HOH 20 120 109 HOH HOH C . F 5 HOH 21 121 118 HOH HOH C . F 5 HOH 22 122 119 HOH HOH C . F 5 HOH 23 123 121 HOH HOH C . F 5 HOH 24 124 123 HOH HOH C . F 5 HOH 25 125 127 HOH HOH C . G 5 HOH 1 101 8 HOH HOH D . G 5 HOH 2 102 12 HOH HOH D . G 5 HOH 3 103 13 HOH HOH D . G 5 HOH 4 104 34 HOH HOH D . G 5 HOH 5 105 42 HOH HOH D . G 5 HOH 6 106 53 HOH HOH D . G 5 HOH 7 107 54 HOH HOH D . G 5 HOH 8 108 66 HOH HOH D . G 5 HOH 9 109 67 HOH HOH D . G 5 HOH 10 110 79 HOH HOH D . G 5 HOH 11 111 80 HOH HOH D . G 5 HOH 12 112 82 HOH HOH D . G 5 HOH 13 113 83 HOH HOH D . G 5 HOH 14 114 84 HOH HOH D . G 5 HOH 15 115 85 HOH HOH D . G 5 HOH 16 116 88 HOH HOH D . G 5 HOH 17 117 110 HOH HOH D . G 5 HOH 18 118 114 HOH HOH D . G 5 HOH 19 119 115 HOH HOH D . G 5 HOH 20 120 117 HOH HOH D . G 5 HOH 21 121 124 HOH HOH D . G 5 HOH 22 122 128 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3460 ? 1 MORE -31 ? 1 'SSA (A^2)' 10380 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ILE 144 ? A ILE 532 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? A LEU 146 ? A LEU 534 ? 1_555 96.1 ? 2 O ? A ILE 144 ? A ILE 532 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? A ILE 149 ? A ILE 537 ? 1_555 90.9 ? 3 O ? A LEU 146 ? A LEU 534 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? A ILE 149 ? A ILE 537 ? 1_555 97.4 ? 4 O ? A ILE 144 ? A ILE 532 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? E HOH . ? A HOH 744 ? 1_555 91.9 ? 5 O ? A LEU 146 ? A LEU 534 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? E HOH . ? A HOH 744 ? 1_555 88.4 ? 6 O ? A ILE 149 ? A ILE 537 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? E HOH . ? A HOH 744 ? 1_555 173.3 ? 7 O ? A ILE 144 ? A ILE 532 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 OP1 ? B DA 10 ? C DA 10 ? 1_555 171.0 ? 8 O ? A LEU 146 ? A LEU 534 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 OP1 ? B DA 10 ? C DA 10 ? 1_555 92.7 ? 9 O ? A ILE 149 ? A ILE 537 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 OP1 ? B DA 10 ? C DA 10 ? 1_555 86.1 ? 10 O ? E HOH . ? A HOH 744 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 OP1 ? B DA 10 ? C DA 10 ? 1_555 90.2 ? 11 O ? A ILE 144 ? A ILE 532 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? F HOH . ? C HOH 117 ? 1_555 90.0 ? 12 O ? A LEU 146 ? A LEU 534 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? F HOH . ? C HOH 117 ? 1_555 172.2 ? 13 O ? A ILE 149 ? A ILE 537 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? F HOH . ? C HOH 117 ? 1_555 87.4 ? 14 O ? E HOH . ? A HOH 744 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? F HOH . ? C HOH 117 ? 1_555 86.5 ? 15 OP1 ? B DA 10 ? C DA 10 ? 1_555 MG ? D MG . ? A MG 601 ? 1_555 O ? F HOH . ? C HOH 117 ? 1_555 81.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-04-22 2 'Structure model' 1 1 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.value' 18 2 'Structure model' '_struct_conn.pdbx_dist_value' 19 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 27 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 33 2 'Structure model' '_struct_ref_seq_dif.details' 34 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 35 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 36 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.7.0029 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 D _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 106 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 D _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 119 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.02 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 389 ? A MET 1 2 1 Y 1 A GLY 390 ? A GLY 2 3 1 Y 1 A SER 391 ? A SER 3 4 1 Y 1 A SER 392 ? A SER 4 5 1 Y 1 A HIS 393 ? A HIS 5 6 1 Y 1 A HIS 394 ? A HIS 6 7 1 Y 1 A HIS 395 ? A HIS 7 8 1 Y 1 A HIS 396 ? A HIS 8 9 1 Y 1 A HIS 397 ? A HIS 9 10 1 Y 1 A HIS 398 ? A HIS 10 11 1 Y 1 A SER 399 ? A SER 11 12 1 Y 1 A SER 400 ? A SER 12 13 1 Y 1 A GLY 401 ? A GLY 13 14 1 Y 1 A LEU 402 ? A LEU 14 15 1 Y 1 A VAL 403 ? A VAL 15 16 1 Y 1 A PRO 404 ? A PRO 16 17 1 Y 1 A ARG 405 ? A ARG 17 18 1 Y 1 A GLY 406 ? A GLY 18 19 1 Y 1 A SER 407 ? A SER 19 20 1 Y 1 A HIS 408 ? A HIS 20 21 1 Y 1 A MET 409 ? A MET 21 22 1 Y 1 A ALA 410 ? A ALA 22 23 1 Y 1 A SER 411 ? A SER 23 24 1 Y 1 A MET 412 ? A MET 24 25 1 Y 1 A THR 413 ? A THR 25 26 1 Y 1 A GLY 414 ? A GLY 26 27 1 Y 1 A GLY 415 ? A GLY 27 28 1 Y 1 A GLN 416 ? A GLN 28 29 1 Y 1 A GLN 417 ? A GLN 29 30 1 Y 1 A MET 418 ? A MET 30 31 1 Y 1 A GLY 419 ? A GLY 31 32 1 Y 1 A ARG 420 ? A ARG 32 33 1 Y 1 A GLY 421 ? A GLY 33 34 1 Y 1 A SER 422 ? A SER 34 35 1 Y 1 A GLU 423 ? A GLU 35 36 1 Y 1 A PHE 424 ? A PHE 36 37 1 Y 1 A MET 425 ? A MET 37 38 1 Y 1 A ALA 426 ? A ALA 38 39 1 Y 1 A LEU 427 ? A LEU 39 40 1 Y 1 A SER 428 ? A SER 40 41 1 Y 1 A PRO 429 ? A PRO 41 42 1 Y 1 A PRO 430 ? A PRO 42 43 1 Y 1 A ARG 431 ? A ARG 43 44 1 Y 1 A ARG 432 ? A ARG 44 45 1 Y 1 A LYS 433 ? A LYS 45 46 1 Y 1 A ALA 434 ? A ALA 46 47 1 Y 1 A PHE 435 ? A PHE 47 48 1 Y 1 A LYS 436 ? A LYS 48 49 1 Y 1 A LYS 437 ? A LYS 49 50 1 Y 1 A SER 580 ? A SER 192 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 MG MG MG N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TRP N N N N 465 TRP CA C N S 466 TRP C C N N 467 TRP O O N N 468 TRP CB C N N 469 TRP CG C Y N 470 TRP CD1 C Y N 471 TRP CD2 C Y N 472 TRP NE1 N Y N 473 TRP CE2 C Y N 474 TRP CE3 C Y N 475 TRP CZ2 C Y N 476 TRP CZ3 C Y N 477 TRP CH2 C Y N 478 TRP OXT O N N 479 TRP H H N N 480 TRP H2 H N N 481 TRP HA H N N 482 TRP HB2 H N N 483 TRP HB3 H N N 484 TRP HD1 H N N 485 TRP HE1 H N N 486 TRP HE3 H N N 487 TRP HZ2 H N N 488 TRP HZ3 H N N 489 TRP HH2 H N N 490 TRP HXT H N N 491 TYR N N N N 492 TYR CA C N S 493 TYR C C N N 494 TYR O O N N 495 TYR CB C N N 496 TYR CG C Y N 497 TYR CD1 C Y N 498 TYR CD2 C Y N 499 TYR CE1 C Y N 500 TYR CE2 C Y N 501 TYR CZ C Y N 502 TYR OH O N N 503 TYR OXT O N N 504 TYR H H N N 505 TYR H2 H N N 506 TYR HA H N N 507 TYR HB2 H N N 508 TYR HB3 H N N 509 TYR HD1 H N N 510 TYR HD2 H N N 511 TYR HE1 H N N 512 TYR HE2 H N N 513 TYR HH H N N 514 TYR HXT H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4OFE 'double helix' 4OFE 'b-form double helix' 4OFE 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 12 1_555 0.426 -0.107 0.085 -16.146 -6.165 2.831 1 C_DC1:DG12_D C 1 ? D 12 ? 19 1 1 B DC 2 1_555 C DG 11 1_555 0.451 -0.342 -0.296 -1.004 7.691 1.987 2 C_DC2:DG11_D C 2 ? D 11 ? 19 1 1 B DA 3 1_555 C DT 10 1_555 0.131 -0.162 0.258 13.086 -11.517 -3.017 3 C_DA3:DT10_D C 3 ? D 10 ? 20 1 1 B DG 4 1_555 C DC 9 1_555 -0.004 -0.047 0.260 7.821 -10.567 2.554 4 C_DG4:DC9_D C 4 ? D 9 ? 19 1 1 B DC 5 1_555 C DG 8 1_555 0.069 -0.084 0.402 -11.536 -8.442 -0.067 5 C_DC5:DG8_D C 5 ? D 8 ? 19 1 1 B DG 6 1_555 C DC 7 1_555 -0.267 -0.151 0.281 2.468 -9.864 1.298 6 C_DG6:DC7_D C 6 ? D 7 ? 19 1 1 B DG 8 1_555 C DC 5 1_555 -0.437 -0.087 -0.340 -14.100 -8.076 0.248 7 C_DG8:DC5_D C 8 ? D 5 ? 19 1 1 B DC 9 1_555 C DG 4 1_555 0.330 -0.076 0.033 2.241 -6.856 -1.099 8 C_DC9:DG4_D C 9 ? D 4 ? 19 1 1 B DA 10 1_555 C DT 3 1_555 0.305 -0.038 0.129 9.468 -11.888 -2.960 9 C_DA10:DT3_D C 10 ? D 3 ? 20 1 1 B DG 11 1_555 C DC 2 1_555 -0.057 -0.038 0.272 13.576 -8.547 -0.425 10 C_DG11:DC2_D C 11 ? D 2 ? 19 1 1 B DC 12 1_555 C DG 1 1_555 0.372 -0.144 -0.156 22.110 -12.581 2.198 11 C_DC12:DG1_D C 12 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 12 1_555 B DC 2 1_555 C DG 11 1_555 0.819 0.631 3.026 6.941 4.965 33.627 0.323 -0.345 3.185 8.415 -11.764 34.662 1 CC_DC1DC2:DG11DG12_DD C 1 ? D 12 ? C 2 ? D 11 ? 1 B DC 2 1_555 C DG 11 1_555 B DA 3 1_555 C DT 10 1_555 -1.216 1.478 3.125 -3.542 2.896 35.690 1.984 1.468 3.332 4.701 5.750 35.973 2 CC_DC2DA3:DT10DG11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 B DA 3 1_555 C DT 10 1_555 B DG 4 1_555 C DC 9 1_555 0.393 -0.645 3.370 -0.567 2.458 31.577 -1.644 -0.828 3.304 4.507 1.039 31.675 3 CC_DA3DG4:DC9DT10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 B DG 4 1_555 C DC 9 1_555 B DC 5 1_555 C DG 8 1_555 -0.140 -0.686 3.769 0.700 -0.213 37.191 -1.043 0.326 3.770 -0.334 -1.098 37.198 4 CC_DG4DC5:DG8DC9_DD C 4 ? D 9 ? C 5 ? D 8 ? 1 B DC 5 1_555 C DG 8 1_555 B DG 6 1_555 C DC 7 1_555 -0.171 0.611 3.095 -1.769 4.797 32.684 0.294 0.014 3.155 8.460 3.120 33.071 5 CC_DC5DG6:DC7DG8_DD C 5 ? D 8 ? C 6 ? D 7 ? 1 B DG 8 1_555 C DC 5 1_555 B DC 9 1_555 C DG 4 1_555 -0.419 -0.092 2.877 -3.226 1.309 28.948 -0.436 0.210 2.898 2.607 6.424 29.153 6 CC_DG8DC9:DG4DC5_DD C 8 ? D 5 ? C 9 ? D 4 ? 1 B DC 9 1_555 C DG 4 1_555 B DA 10 1_555 C DT 3 1_555 0.249 0.712 3.212 3.701 4.276 36.574 0.548 0.105 3.280 6.764 -5.854 36.994 7 CC_DC9DA10:DT3DG4_DD C 9 ? D 4 ? C 10 ? D 3 ? 1 B DA 10 1_555 C DT 3 1_555 B DG 11 1_555 C DC 2 1_555 0.537 -0.231 3.265 -1.524 1.353 30.992 -0.689 -1.293 3.223 2.529 2.849 31.057 8 CC_DA10DG11:DC2DT3_DD C 10 ? D 3 ? C 11 ? D 2 ? 1 B DG 11 1_555 C DC 2 1_555 B DC 12 1_555 C DG 1 1_555 0.854 -0.646 3.115 -0.229 0.178 36.793 -1.047 -1.382 3.107 0.282 0.363 36.794 9 CC_DG11DC12:DG1DC2_DD C 11 ? D 2 ? C 12 ? D 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4E9G _pdbx_initial_refinement_model.details 'PDB ENTRY 4E9G' #