data_4OGT # _entry.id 4OGT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4OGT pdb_00004ogt 10.2210/pdb4ogt/pdb RCSB RCSB084474 ? ? WWPDB D_1000084474 ? ? # _pdbx_database_status.entry_id 4OGT _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-01-16 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shaffer, P.L.' 1 'Huang, X.' 2 'Yakowec, P.' 3 'Long, A.M.' 4 # _citation.id primary _citation.title 'Novel Inhibitors of the MDM2-p53 Interaction Featuring Hydrogen Bond Acceptors as Carboxylic Acid Isosteres.' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 57 _citation.page_first 2963 _citation.page_last 2988 _citation.year 2014 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24601644 _citation.pdbx_database_id_DOI 10.1021/jm401911v # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gonzalez, A.Z.' 1 ? primary 'Li, Z.' 2 ? primary 'Beck, H.P.' 3 ? primary 'Canon, J.' 4 ? primary 'Chen, A.' 5 ? primary 'Chow, D.' 6 ? primary 'Duquette, J.' 7 ? primary 'Eksterowicz, J.' 8 ? primary 'Fox, B.M.' 9 ? primary 'Fu, J.' 10 ? primary 'Huang, X.' 11 ? primary 'Houze, J.' 12 ? primary 'Jin, L.' 13 ? primary 'Li, Y.' 14 ? primary 'Ling, Y.' 15 ? primary 'Lo, M.C.' 16 ? primary 'Long, A.M.' 17 ? primary 'McGee, L.R.' 18 ? primary 'McIntosh, J.' 19 ? primary 'Oliner, J.D.' 20 ? primary 'Osgood, T.' 21 ? primary 'Rew, Y.' 22 ? primary 'Saiki, A.Y.' 23 ? primary 'Shaffer, P.' 24 ? primary 'Wortman, S.' 25 ? primary 'Yakowec, P.' 26 ? primary 'Yan, X.' 27 ? primary 'Ye, Q.' 28 ? primary 'Yu, D.' 29 ? primary 'Zhao, X.' 30 ? primary 'Zhou, J.' 31 ? primary 'Olson, S.H.' 32 ? primary 'Sun, D.' 33 ? primary 'Medina, J.C.' 34 ? # _cell.length_a 45.517 _cell.length_b 45.517 _cell.length_c 208.624 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4OGT _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.entry_id 4OGT _symmetry.Int_Tables_number 178 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 ubiquitin-protein ligase Mdm2' 12045.075 1 6.3.2.- ? 'UNP Residue 6-110' ? 2 non-polymer syn ;6-{[(2R,5R,6R)-4-[(1S)-2-(tert-butylsulfonyl)-1-cyclopropylethyl]-6-(3-chlorophenyl)-5-(4-chlorophenyl)-2-methyl-3-oxomorpholin-2-yl]methyl}pyridine-3-carboxylic acid ; 659.620 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 water nat water 18.015 98 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Double minute 2 protein, Hdm2, Oncoprotein Mdm2, p53-binding protein Mdm2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDL FGVPSFSVKEHRKIYTMIYRNLVVV ; _entity_poly.pdbx_seq_one_letter_code_can ;MSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDL FGVPSFSVKEHRKIYTMIYRNLVVV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 VAL n 1 4 PRO n 1 5 THR n 1 6 ASP n 1 7 GLY n 1 8 ALA n 1 9 VAL n 1 10 THR n 1 11 THR n 1 12 SER n 1 13 GLN n 1 14 ILE n 1 15 PRO n 1 16 ALA n 1 17 SER n 1 18 GLU n 1 19 GLN n 1 20 GLU n 1 21 THR n 1 22 LEU n 1 23 VAL n 1 24 ARG n 1 25 PRO n 1 26 LYS n 1 27 PRO n 1 28 LEU n 1 29 LEU n 1 30 LEU n 1 31 LYS n 1 32 LEU n 1 33 LEU n 1 34 LYS n 1 35 SER n 1 36 VAL n 1 37 GLY n 1 38 ALA n 1 39 GLN n 1 40 LYS n 1 41 ASP n 1 42 THR n 1 43 TYR n 1 44 THR n 1 45 MET n 1 46 LYS n 1 47 GLU n 1 48 VAL n 1 49 LEU n 1 50 PHE n 1 51 TYR n 1 52 LEU n 1 53 GLY n 1 54 GLN n 1 55 TYR n 1 56 ILE n 1 57 MET n 1 58 THR n 1 59 LYS n 1 60 ARG n 1 61 LEU n 1 62 TYR n 1 63 ASP n 1 64 GLU n 1 65 LYS n 1 66 GLN n 1 67 GLN n 1 68 HIS n 1 69 ILE n 1 70 VAL n 1 71 TYR n 1 72 CYS n 1 73 SER n 1 74 ASN n 1 75 ASP n 1 76 LEU n 1 77 LEU n 1 78 GLY n 1 79 ASP n 1 80 LEU n 1 81 PHE n 1 82 GLY n 1 83 VAL n 1 84 PRO n 1 85 SER n 1 86 PHE n 1 87 SER n 1 88 VAL n 1 89 LYS n 1 90 GLU n 1 91 HIS n 1 92 ARG n 1 93 LYS n 1 94 ILE n 1 95 TYR n 1 96 THR n 1 97 MET n 1 98 ILE n 1 99 TYR n 1 100 ARG n 1 101 ASN n 1 102 LEU n 1 103 VAL n 1 104 VAL n 1 105 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MDM2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MDM2_HUMAN _struct_ref.pdbx_db_accession Q00987 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSVPTDGAVTTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDL FGVPSFSVKEHRKIYTMIYRNLVVV ; _struct_ref.pdbx_align_begin 6 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4OGT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 105 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q00987 _struct_ref_seq.db_align_beg 6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 110 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 110 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2U6 non-polymer . ;6-{[(2R,5R,6R)-4-[(1S)-2-(tert-butylsulfonyl)-1-cyclopropylethyl]-6-(3-chlorophenyl)-5-(4-chlorophenyl)-2-methyl-3-oxomorpholin-2-yl]methyl}pyridine-3-carboxylic acid ; ? 'C33 H36 Cl2 N2 O6 S' 659.620 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4OGT _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 52.50 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.8-1.8M Ammonium Sulfate, 0.1M sodium citrate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2013-04-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.entry_id 4OGT _reflns.d_resolution_high 1.550 _reflns.d_resolution_low 50.000 _reflns.number_obs 19582 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_netI_over_sigmaI 9.700 _reflns.pdbx_chi_squared 1.507 _reflns.pdbx_redundancy 11.700 _reflns.percent_possible_obs 99.700 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.550 1.610 ? ? ? 0.669 ? ? 0.655 9.900 ? 1842 97.900 1 1 1.610 1.670 ? ? ? 0.517 ? ? 0.674 11.600 ? 1902 100.000 2 1 1.670 1.750 ? ? ? 0.379 ? ? 0.729 12.100 ? 1893 100.000 3 1 1.750 1.840 ? ? ? 0.245 ? ? 0.846 12.300 ? 1898 100.000 4 1 1.840 1.950 ? ? ? 0.166 ? ? 1.075 12.200 ? 1951 100.000 5 1 1.950 2.100 ? ? ? 0.124 ? ? 1.362 12.200 ? 1914 100.000 6 1 2.100 2.320 ? ? ? 0.090 ? ? 1.627 12.200 ? 1951 100.000 7 1 2.320 2.650 ? ? ? 0.081 ? ? 2.062 12.300 ? 1993 99.900 8 1 2.650 3.340 ? ? ? 0.066 ? ? 2.773 12.200 ? 2008 100.000 9 1 3.340 50.000 ? ? ? 0.053 ? ? 3.003 10.000 ? 2230 99.200 10 1 # _refine.entry_id 4OGT _refine.ls_d_res_high 1.5361 _refine.ls_d_res_low 36.8740 _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.0900 _refine.ls_number_reflns_obs 19452 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details Random _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2146 _refine.ls_R_factor_R_work 0.2141 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2247 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0100 _refine.ls_number_reflns_R_free 974 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 29.2218 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.1500 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB Entry 4ERF' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7883 _refine.B_iso_max 65.160 _refine.B_iso_min 15.750 _refine.pdbx_overall_phase_error 26.1700 _refine.occupancy_max 1.000 _refine.occupancy_min 0.310 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 796 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 49 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 943 _refine_hist.d_res_high 1.5361 _refine_hist.d_res_low 36.8740 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 894 0.006 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1226 1.133 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 143 0.073 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 146 0.006 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 346 13.962 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.5361 1.6171 7 73.0000 1943 . 0.2824 0.3195 . 110 . 2053 . . 'X-RAY DIFFRACTION' 1.6171 1.7184 7 100.0000 2624 . 0.2678 0.3016 . 155 . 2779 . . 'X-RAY DIFFRACTION' 1.7184 1.8511 7 100.0000 2659 . 0.2555 0.2915 . 144 . 2803 . . 'X-RAY DIFFRACTION' 1.8511 2.0374 7 100.0000 2709 . 0.2337 0.2482 . 137 . 2846 . . 'X-RAY DIFFRACTION' 2.0374 2.3321 7 100.0000 2735 . 0.2223 0.2239 . 145 . 2880 . . 'X-RAY DIFFRACTION' 2.3321 2.9380 7 100.0000 2797 . 0.2305 0.2391 . 140 . 2937 . . 'X-RAY DIFFRACTION' 2.9380 36.8845 7 100.0000 3011 . 0.1919 0.1949 . 143 . 3154 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4OGT _struct.title 'Co-Crystal Structure of MDM2 with Inhbitor Compound 46' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OGT _struct_keywords.text 'P53, protein-protein interaction, ligase-ligase inhibitor complex' _struct_keywords.pdbx_keywords 'LIGASE/LIGASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 15 ? GLU A 20 ? PRO A 20 GLU A 25 5 ? 6 HELX_P HELX_P2 2 LYS A 26 ? SER A 35 ? LYS A 31 SER A 40 1 ? 10 HELX_P HELX_P3 3 MET A 45 ? LYS A 59 ? MET A 50 LYS A 64 1 ? 15 HELX_P HELX_P4 4 ASP A 75 ? GLY A 82 ? ASP A 80 GLY A 87 1 ? 8 HELX_P HELX_P5 5 GLU A 90 ? ARG A 100 ? GLU A 95 ARG A 105 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 43 ? THR A 44 ? TYR A 48 THR A 49 A 2 LEU A 22 ? PRO A 25 ? LEU A 27 PRO A 30 A 3 LEU A 102 ? VAL A 104 ? LEU A 107 VAL A 109 B 1 ILE A 69 ? TYR A 71 ? ILE A 74 TYR A 76 B 2 SER A 85 ? SER A 87 ? SER A 90 SER A 92 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 43 ? O TYR A 48 N VAL A 23 ? N VAL A 28 A 2 3 N ARG A 24 ? N ARG A 29 O VAL A 103 ? O VAL A 108 B 1 2 N VAL A 70 ? N VAL A 75 O PHE A 86 ? O PHE A 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 2U6 201 ? 14 'BINDING SITE FOR RESIDUE 2U6 A 201' AC2 Software A SO4 202 ? 7 'BINDING SITE FOR RESIDUE SO4 A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 THR A 11 ? THR A 16 . ? 1_555 ? 2 AC1 14 GLU A 18 ? GLU A 23 . ? 8_665 ? 3 AC1 14 LEU A 49 ? LEU A 54 . ? 1_555 ? 4 AC1 14 ILE A 56 ? ILE A 61 . ? 1_555 ? 5 AC1 14 MET A 57 ? MET A 62 . ? 1_555 ? 6 AC1 14 VAL A 88 ? VAL A 93 . ? 1_555 ? 7 AC1 14 HIS A 91 ? HIS A 96 . ? 1_555 ? 8 AC1 14 TYR A 99 ? TYR A 104 . ? 8_665 ? 9 AC1 14 VAL A 104 ? VAL A 109 . ? 8_665 ? 10 AC1 14 VAL A 105 ? VAL A 110 . ? 8_665 ? 11 AC1 14 HOH D . ? HOH A 302 . ? 1_555 ? 12 AC1 14 HOH D . ? HOH A 320 . ? 1_555 ? 13 AC1 14 HOH D . ? HOH A 357 . ? 1_555 ? 14 AC1 14 HOH D . ? HOH A 390 . ? 1_555 ? 15 AC2 7 PRO A 15 ? PRO A 20 . ? 1_555 ? 16 AC2 7 ALA A 16 ? ALA A 21 . ? 1_555 ? 17 AC2 7 THR A 58 ? THR A 63 . ? 8_565 ? 18 AC2 7 HOH D . ? HOH A 307 . ? 8_565 ? 19 AC2 7 HOH D . ? HOH A 314 . ? 1_555 ? 20 AC2 7 HOH D . ? HOH A 351 . ? 8_565 ? 21 AC2 7 HOH D . ? HOH A 385 . ? 1_555 ? # _atom_sites.entry_id 4OGT _atom_sites.fract_transf_matrix[1][1] 0.021970 _atom_sites.fract_transf_matrix[1][2] 0.012684 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025369 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004793 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 6 ? ? ? A . n A 1 2 SER 2 7 ? ? ? A . n A 1 3 VAL 3 8 ? ? ? A . n A 1 4 PRO 4 9 ? ? ? A . n A 1 5 THR 5 10 ? ? ? A . n A 1 6 ASP 6 11 ? ? ? A . n A 1 7 GLY 7 12 12 GLY GLY A . n A 1 8 ALA 8 13 13 ALA ALA A . n A 1 9 VAL 9 14 14 VAL VAL A . n A 1 10 THR 10 15 15 THR THR A . n A 1 11 THR 11 16 16 THR THR A . n A 1 12 SER 12 17 17 SER SER A . n A 1 13 GLN 13 18 18 GLN GLN A . n A 1 14 ILE 14 19 19 ILE ILE A . n A 1 15 PRO 15 20 20 PRO PRO A . n A 1 16 ALA 16 21 21 ALA ALA A . n A 1 17 SER 17 22 22 SER SER A . n A 1 18 GLU 18 23 23 GLU GLU A . n A 1 19 GLN 19 24 24 GLN GLN A . n A 1 20 GLU 20 25 25 GLU GLU A . n A 1 21 THR 21 26 26 THR THR A . n A 1 22 LEU 22 27 27 LEU LEU A . n A 1 23 VAL 23 28 28 VAL VAL A . n A 1 24 ARG 24 29 29 ARG ARG A . n A 1 25 PRO 25 30 30 PRO PRO A . n A 1 26 LYS 26 31 31 LYS LYS A . n A 1 27 PRO 27 32 32 PRO PRO A . n A 1 28 LEU 28 33 33 LEU LEU A . n A 1 29 LEU 29 34 34 LEU LEU A . n A 1 30 LEU 30 35 35 LEU LEU A . n A 1 31 LYS 31 36 36 LYS LYS A . n A 1 32 LEU 32 37 37 LEU LEU A . n A 1 33 LEU 33 38 38 LEU LEU A . n A 1 34 LYS 34 39 39 LYS LYS A . n A 1 35 SER 35 40 40 SER SER A . n A 1 36 VAL 36 41 41 VAL VAL A . n A 1 37 GLY 37 42 42 GLY GLY A . n A 1 38 ALA 38 43 43 ALA ALA A . n A 1 39 GLN 39 44 44 GLN GLN A . n A 1 40 LYS 40 45 45 LYS LYS A . n A 1 41 ASP 41 46 46 ASP ASP A . n A 1 42 THR 42 47 47 THR THR A . n A 1 43 TYR 43 48 48 TYR TYR A . n A 1 44 THR 44 49 49 THR THR A . n A 1 45 MET 45 50 50 MET MET A . n A 1 46 LYS 46 51 51 LYS LYS A . n A 1 47 GLU 47 52 52 GLU GLU A . n A 1 48 VAL 48 53 53 VAL VAL A . n A 1 49 LEU 49 54 54 LEU LEU A . n A 1 50 PHE 50 55 55 PHE PHE A . n A 1 51 TYR 51 56 56 TYR TYR A . n A 1 52 LEU 52 57 57 LEU LEU A . n A 1 53 GLY 53 58 58 GLY GLY A . n A 1 54 GLN 54 59 59 GLN GLN A . n A 1 55 TYR 55 60 60 TYR TYR A . n A 1 56 ILE 56 61 61 ILE ILE A . n A 1 57 MET 57 62 62 MET MET A . n A 1 58 THR 58 63 63 THR THR A . n A 1 59 LYS 59 64 64 LYS LYS A . n A 1 60 ARG 60 65 65 ARG ARG A . n A 1 61 LEU 61 66 66 LEU LEU A . n A 1 62 TYR 62 67 67 TYR TYR A . n A 1 63 ASP 63 68 68 ASP ASP A . n A 1 64 GLU 64 69 69 GLU GLU A . n A 1 65 LYS 65 70 70 LYS LYS A . n A 1 66 GLN 66 71 71 GLN GLN A . n A 1 67 GLN 67 72 72 GLN GLN A . n A 1 68 HIS 68 73 73 HIS HIS A . n A 1 69 ILE 69 74 74 ILE ILE A . n A 1 70 VAL 70 75 75 VAL VAL A . n A 1 71 TYR 71 76 76 TYR TYR A . n A 1 72 CYS 72 77 77 CYS CYS A . n A 1 73 SER 73 78 78 SER SER A . n A 1 74 ASN 74 79 79 ASN ASN A . n A 1 75 ASP 75 80 80 ASP ASP A . n A 1 76 LEU 76 81 81 LEU LEU A . n A 1 77 LEU 77 82 82 LEU LEU A . n A 1 78 GLY 78 83 83 GLY GLY A . n A 1 79 ASP 79 84 84 ASP ASP A . n A 1 80 LEU 80 85 85 LEU LEU A . n A 1 81 PHE 81 86 86 PHE PHE A . n A 1 82 GLY 82 87 87 GLY GLY A . n A 1 83 VAL 83 88 88 VAL VAL A . n A 1 84 PRO 84 89 89 PRO PRO A . n A 1 85 SER 85 90 90 SER SER A . n A 1 86 PHE 86 91 91 PHE PHE A . n A 1 87 SER 87 92 92 SER SER A . n A 1 88 VAL 88 93 93 VAL VAL A . n A 1 89 LYS 89 94 94 LYS LYS A . n A 1 90 GLU 90 95 95 GLU GLU A . n A 1 91 HIS 91 96 96 HIS HIS A . n A 1 92 ARG 92 97 97 ARG ARG A . n A 1 93 LYS 93 98 98 LYS LYS A . n A 1 94 ILE 94 99 99 ILE ILE A . n A 1 95 TYR 95 100 100 TYR TYR A . n A 1 96 THR 96 101 101 THR THR A . n A 1 97 MET 97 102 102 MET MET A . n A 1 98 ILE 98 103 103 ILE ILE A . n A 1 99 TYR 99 104 104 TYR TYR A . n A 1 100 ARG 100 105 105 ARG ARG A . n A 1 101 ASN 101 106 106 ASN ASN A . n A 1 102 LEU 102 107 107 LEU LEU A . n A 1 103 VAL 103 108 108 VAL VAL A . n A 1 104 VAL 104 109 109 VAL VAL A . n A 1 105 VAL 105 110 110 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2U6 1 201 1 2U6 UNL A . C 3 SO4 1 202 1 SO4 SO4 A . D 4 HOH 1 301 1 HOH HOH A . D 4 HOH 2 302 2 HOH HOH A . D 4 HOH 3 303 3 HOH HOH A . D 4 HOH 4 304 4 HOH HOH A . D 4 HOH 5 305 5 HOH HOH A . D 4 HOH 6 306 6 HOH HOH A . D 4 HOH 7 307 7 HOH HOH A . D 4 HOH 8 308 8 HOH HOH A . D 4 HOH 9 309 9 HOH HOH A . D 4 HOH 10 310 10 HOH HOH A . D 4 HOH 11 311 11 HOH HOH A . D 4 HOH 12 312 12 HOH HOH A . D 4 HOH 13 313 13 HOH HOH A . D 4 HOH 14 314 14 HOH HOH A . D 4 HOH 15 315 15 HOH HOH A . D 4 HOH 16 316 16 HOH HOH A . D 4 HOH 17 317 17 HOH HOH A . D 4 HOH 18 318 18 HOH HOH A . D 4 HOH 19 319 19 HOH HOH A . D 4 HOH 20 320 20 HOH HOH A . D 4 HOH 21 321 21 HOH HOH A . D 4 HOH 22 322 22 HOH HOH A . D 4 HOH 23 323 23 HOH HOH A . D 4 HOH 24 324 24 HOH HOH A . D 4 HOH 25 325 25 HOH HOH A . D 4 HOH 26 326 26 HOH HOH A . D 4 HOH 27 327 27 HOH HOH A . D 4 HOH 28 328 28 HOH HOH A . D 4 HOH 29 329 29 HOH HOH A . D 4 HOH 30 330 30 HOH HOH A . D 4 HOH 31 331 31 HOH HOH A . D 4 HOH 32 332 32 HOH HOH A . D 4 HOH 33 333 33 HOH HOH A . D 4 HOH 34 334 34 HOH HOH A . D 4 HOH 35 335 35 HOH HOH A . D 4 HOH 36 336 36 HOH HOH A . D 4 HOH 37 337 37 HOH HOH A . D 4 HOH 38 338 38 HOH HOH A . D 4 HOH 39 339 39 HOH HOH A . D 4 HOH 40 340 40 HOH HOH A . D 4 HOH 41 341 41 HOH HOH A . D 4 HOH 42 342 42 HOH HOH A . D 4 HOH 43 343 43 HOH HOH A . D 4 HOH 44 344 44 HOH HOH A . D 4 HOH 45 345 45 HOH HOH A . D 4 HOH 46 346 46 HOH HOH A . D 4 HOH 47 347 47 HOH HOH A . D 4 HOH 48 348 48 HOH HOH A . D 4 HOH 49 349 49 HOH HOH A . D 4 HOH 50 350 50 HOH HOH A . D 4 HOH 51 351 51 HOH HOH A . D 4 HOH 52 352 52 HOH HOH A . D 4 HOH 53 353 53 HOH HOH A . D 4 HOH 54 354 54 HOH HOH A . D 4 HOH 55 355 55 HOH HOH A . D 4 HOH 56 356 56 HOH HOH A . D 4 HOH 57 357 57 HOH HOH A . D 4 HOH 58 358 58 HOH HOH A . D 4 HOH 59 359 59 HOH HOH A . D 4 HOH 60 360 60 HOH HOH A . D 4 HOH 61 361 61 HOH HOH A . D 4 HOH 62 362 62 HOH HOH A . D 4 HOH 63 363 63 HOH HOH A . D 4 HOH 64 364 64 HOH HOH A . D 4 HOH 65 365 65 HOH HOH A . D 4 HOH 66 366 66 HOH HOH A . D 4 HOH 67 367 67 HOH HOH A . D 4 HOH 68 368 68 HOH HOH A . D 4 HOH 69 369 69 HOH HOH A . D 4 HOH 70 370 70 HOH HOH A . D 4 HOH 71 371 71 HOH HOH A . D 4 HOH 72 372 72 HOH HOH A . D 4 HOH 73 373 73 HOH HOH A . D 4 HOH 74 374 74 HOH HOH A . D 4 HOH 75 375 75 HOH HOH A . D 4 HOH 76 376 76 HOH HOH A . D 4 HOH 77 377 77 HOH HOH A . D 4 HOH 78 378 78 HOH HOH A . D 4 HOH 79 379 79 HOH HOH A . D 4 HOH 80 380 80 HOH HOH A . D 4 HOH 81 381 81 HOH HOH A . D 4 HOH 82 382 82 HOH HOH A . D 4 HOH 83 383 83 HOH HOH A . D 4 HOH 84 384 84 HOH HOH A . D 4 HOH 85 385 85 HOH HOH A . D 4 HOH 86 386 86 HOH HOH A . D 4 HOH 87 387 87 HOH HOH A . D 4 HOH 88 388 88 HOH HOH A . D 4 HOH 89 389 89 HOH HOH A . D 4 HOH 90 390 90 HOH HOH A . D 4 HOH 91 391 91 HOH HOH A . D 4 HOH 92 392 92 HOH HOH A . D 4 HOH 93 393 93 HOH HOH A . D 4 HOH 94 394 94 HOH HOH A . D 4 HOH 95 395 95 HOH HOH A . D 4 HOH 96 396 96 HOH HOH A . D 4 HOH 97 397 97 HOH HOH A . D 4 HOH 98 398 98 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 343 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-04-02 2 'Structure model' 1 1 2014-06-18 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -13.9002 _pdbx_refine_tls.origin_y 17.7409 _pdbx_refine_tls.origin_z -6.4554 _pdbx_refine_tls.T[1][1] 0.2236 _pdbx_refine_tls.T[2][2] 0.1752 _pdbx_refine_tls.T[3][3] 0.1693 _pdbx_refine_tls.T[1][2] -0.0066 _pdbx_refine_tls.T[1][3] -0.0471 _pdbx_refine_tls.T[2][3] -0.0587 _pdbx_refine_tls.L[1][1] 2.2643 _pdbx_refine_tls.L[2][2] 2.8205 _pdbx_refine_tls.L[3][3] 2.6198 _pdbx_refine_tls.L[1][2] 0.7676 _pdbx_refine_tls.L[1][3] -0.2248 _pdbx_refine_tls.L[2][3] 1.0745 _pdbx_refine_tls.S[1][1] -0.1532 _pdbx_refine_tls.S[2][2] 0.2174 _pdbx_refine_tls.S[3][3] -0.0573 _pdbx_refine_tls.S[1][2] 0.1992 _pdbx_refine_tls.S[1][3] 0.0262 _pdbx_refine_tls.S[2][3] -0.0877 _pdbx_refine_tls.S[2][1] -0.2904 _pdbx_refine_tls.S[3][1] -0.1319 _pdbx_refine_tls.S[3][2] 0.1199 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 0 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 0 _pdbx_refine_tls_group.selection_details ;chain 'A' and (resid 12 through 110 ) ; _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHENIX 1.8_1069 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 383 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 384 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_565 _pdbx_validate_symm_contact.dist 2.10 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 36 ? CE ? A LYS 31 CE 2 1 Y 1 A LYS 36 ? NZ ? A LYS 31 NZ 3 1 Y 1 A GLN 44 ? CG ? A GLN 39 CG 4 1 Y 1 A GLN 44 ? CD ? A GLN 39 CD 5 1 Y 1 A GLN 44 ? OE1 ? A GLN 39 OE1 6 1 Y 1 A GLN 44 ? NE2 ? A GLN 39 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 6 ? A MET 1 2 1 Y 1 A SER 7 ? A SER 2 3 1 Y 1 A VAL 8 ? A VAL 3 4 1 Y 1 A PRO 9 ? A PRO 4 5 1 Y 1 A THR 10 ? A THR 5 6 1 Y 1 A ASP 11 ? A ASP 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2U6 C11 C Y N 1 2U6 C10 C Y N 2 2U6 CL1 CL N N 3 2U6 C9 C Y N 4 2U6 C8 C Y N 5 2U6 C7 C Y N 6 2U6 C6 C Y N 7 2U6 C2 C N R 8 2U6 O1 O N N 9 2U6 C3 C N R 10 2U6 C22 C N N 11 2U6 C24 C Y N 12 2U6 C25 C Y N 13 2U6 C26 C Y N 14 2U6 C27 C Y N 15 2U6 C29 C N N 16 2U6 O4 O N N 17 2U6 O3 O N N 18 2U6 C28 C Y N 19 2U6 N2 N Y N 20 2U6 C23 C N N 21 2U6 C4 C N N 22 2U6 O2 O N N 23 2U6 N1 N N N 24 2U6 C17 C N S 25 2U6 C18 C N N 26 2U6 C20 C N N 27 2U6 C21 C N N 28 2U6 C19 C N N 29 2U6 S1 S N N 30 2U6 O5 O N N 31 2U6 O6 O N N 32 2U6 C30 C N N 33 2U6 C32 C N N 34 2U6 C33 C N N 35 2U6 C31 C N N 36 2U6 C1 C N R 37 2U6 C5 C Y N 38 2U6 C12 C Y N 39 2U6 C13 C Y N 40 2U6 C14 C Y N 41 2U6 CL2 CL N N 42 2U6 C15 C Y N 43 2U6 C16 C Y N 44 2U6 H1 H N N 45 2U6 H2 H N N 46 2U6 H3 H N N 47 2U6 H4 H N N 48 2U6 H5 H N N 49 2U6 H6 H N N 50 2U6 H7 H N N 51 2U6 H8 H N N 52 2U6 H9 H N N 53 2U6 H10 H N N 54 2U6 H11 H N N 55 2U6 H12 H N N 56 2U6 H13 H N N 57 2U6 H14 H N N 58 2U6 H15 H N N 59 2U6 H16 H N N 60 2U6 H17 H N N 61 2U6 H18 H N N 62 2U6 H19 H N N 63 2U6 H20 H N N 64 2U6 H21 H N N 65 2U6 H22 H N N 66 2U6 H23 H N N 67 2U6 H24 H N N 68 2U6 H25 H N N 69 2U6 H26 H N N 70 2U6 H27 H N N 71 2U6 H28 H N N 72 2U6 H29 H N N 73 2U6 H30 H N N 74 2U6 H31 H N N 75 2U6 H32 H N N 76 2U6 H33 H N N 77 2U6 H34 H N N 78 2U6 H35 H N N 79 2U6 H36 H N N 80 ALA N N N N 81 ALA CA C N S 82 ALA C C N N 83 ALA O O N N 84 ALA CB C N N 85 ALA OXT O N N 86 ALA H H N N 87 ALA H2 H N N 88 ALA HA H N N 89 ALA HB1 H N N 90 ALA HB2 H N N 91 ALA HB3 H N N 92 ALA HXT H N N 93 ARG N N N N 94 ARG CA C N S 95 ARG C C N N 96 ARG O O N N 97 ARG CB C N N 98 ARG CG C N N 99 ARG CD C N N 100 ARG NE N N N 101 ARG CZ C N N 102 ARG NH1 N N N 103 ARG NH2 N N N 104 ARG OXT O N N 105 ARG H H N N 106 ARG H2 H N N 107 ARG HA H N N 108 ARG HB2 H N N 109 ARG HB3 H N N 110 ARG HG2 H N N 111 ARG HG3 H N N 112 ARG HD2 H N N 113 ARG HD3 H N N 114 ARG HE H N N 115 ARG HH11 H N N 116 ARG HH12 H N N 117 ARG HH21 H N N 118 ARG HH22 H N N 119 ARG HXT H N N 120 ASN N N N N 121 ASN CA C N S 122 ASN C C N N 123 ASN O O N N 124 ASN CB C N N 125 ASN CG C N N 126 ASN OD1 O N N 127 ASN ND2 N N N 128 ASN OXT O N N 129 ASN H H N N 130 ASN H2 H N N 131 ASN HA H N N 132 ASN HB2 H N N 133 ASN HB3 H N N 134 ASN HD21 H N N 135 ASN HD22 H N N 136 ASN HXT H N N 137 ASP N N N N 138 ASP CA C N S 139 ASP C C N N 140 ASP O O N N 141 ASP CB C N N 142 ASP CG C N N 143 ASP OD1 O N N 144 ASP OD2 O N N 145 ASP OXT O N N 146 ASP H H N N 147 ASP H2 H N N 148 ASP HA H N N 149 ASP HB2 H N N 150 ASP HB3 H N N 151 ASP HD2 H N N 152 ASP HXT H N N 153 CYS N N N N 154 CYS CA C N R 155 CYS C C N N 156 CYS O O N N 157 CYS CB C N N 158 CYS SG S N N 159 CYS OXT O N N 160 CYS H H N N 161 CYS H2 H N N 162 CYS HA H N N 163 CYS HB2 H N N 164 CYS HB3 H N N 165 CYS HG H N N 166 CYS HXT H N N 167 GLN N N N N 168 GLN CA C N S 169 GLN C C N N 170 GLN O O N N 171 GLN CB C N N 172 GLN CG C N N 173 GLN CD C N N 174 GLN OE1 O N N 175 GLN NE2 N N N 176 GLN OXT O N N 177 GLN H H N N 178 GLN H2 H N N 179 GLN HA H N N 180 GLN HB2 H N N 181 GLN HB3 H N N 182 GLN HG2 H N N 183 GLN HG3 H N N 184 GLN HE21 H N N 185 GLN HE22 H N N 186 GLN HXT H N N 187 GLU N N N N 188 GLU CA C N S 189 GLU C C N N 190 GLU O O N N 191 GLU CB C N N 192 GLU CG C N N 193 GLU CD C N N 194 GLU OE1 O N N 195 GLU OE2 O N N 196 GLU OXT O N N 197 GLU H H N N 198 GLU H2 H N N 199 GLU HA H N N 200 GLU HB2 H N N 201 GLU HB3 H N N 202 GLU HG2 H N N 203 GLU HG3 H N N 204 GLU HE2 H N N 205 GLU HXT H N N 206 GLY N N N N 207 GLY CA C N N 208 GLY C C N N 209 GLY O O N N 210 GLY OXT O N N 211 GLY H H N N 212 GLY H2 H N N 213 GLY HA2 H N N 214 GLY HA3 H N N 215 GLY HXT H N N 216 HIS N N N N 217 HIS CA C N S 218 HIS C C N N 219 HIS O O N N 220 HIS CB C N N 221 HIS CG C Y N 222 HIS ND1 N Y N 223 HIS CD2 C Y N 224 HIS CE1 C Y N 225 HIS NE2 N Y N 226 HIS OXT O N N 227 HIS H H N N 228 HIS H2 H N N 229 HIS HA H N N 230 HIS HB2 H N N 231 HIS HB3 H N N 232 HIS HD1 H N N 233 HIS HD2 H N N 234 HIS HE1 H N N 235 HIS HE2 H N N 236 HIS HXT H N N 237 HOH O O N N 238 HOH H1 H N N 239 HOH H2 H N N 240 ILE N N N N 241 ILE CA C N S 242 ILE C C N N 243 ILE O O N N 244 ILE CB C N S 245 ILE CG1 C N N 246 ILE CG2 C N N 247 ILE CD1 C N N 248 ILE OXT O N N 249 ILE H H N N 250 ILE H2 H N N 251 ILE HA H N N 252 ILE HB H N N 253 ILE HG12 H N N 254 ILE HG13 H N N 255 ILE HG21 H N N 256 ILE HG22 H N N 257 ILE HG23 H N N 258 ILE HD11 H N N 259 ILE HD12 H N N 260 ILE HD13 H N N 261 ILE HXT H N N 262 LEU N N N N 263 LEU CA C N S 264 LEU C C N N 265 LEU O O N N 266 LEU CB C N N 267 LEU CG C N N 268 LEU CD1 C N N 269 LEU CD2 C N N 270 LEU OXT O N N 271 LEU H H N N 272 LEU H2 H N N 273 LEU HA H N N 274 LEU HB2 H N N 275 LEU HB3 H N N 276 LEU HG H N N 277 LEU HD11 H N N 278 LEU HD12 H N N 279 LEU HD13 H N N 280 LEU HD21 H N N 281 LEU HD22 H N N 282 LEU HD23 H N N 283 LEU HXT H N N 284 LYS N N N N 285 LYS CA C N S 286 LYS C C N N 287 LYS O O N N 288 LYS CB C N N 289 LYS CG C N N 290 LYS CD C N N 291 LYS CE C N N 292 LYS NZ N N N 293 LYS OXT O N N 294 LYS H H N N 295 LYS H2 H N N 296 LYS HA H N N 297 LYS HB2 H N N 298 LYS HB3 H N N 299 LYS HG2 H N N 300 LYS HG3 H N N 301 LYS HD2 H N N 302 LYS HD3 H N N 303 LYS HE2 H N N 304 LYS HE3 H N N 305 LYS HZ1 H N N 306 LYS HZ2 H N N 307 LYS HZ3 H N N 308 LYS HXT H N N 309 MET N N N N 310 MET CA C N S 311 MET C C N N 312 MET O O N N 313 MET CB C N N 314 MET CG C N N 315 MET SD S N N 316 MET CE C N N 317 MET OXT O N N 318 MET H H N N 319 MET H2 H N N 320 MET HA H N N 321 MET HB2 H N N 322 MET HB3 H N N 323 MET HG2 H N N 324 MET HG3 H N N 325 MET HE1 H N N 326 MET HE2 H N N 327 MET HE3 H N N 328 MET HXT H N N 329 PHE N N N N 330 PHE CA C N S 331 PHE C C N N 332 PHE O O N N 333 PHE CB C N N 334 PHE CG C Y N 335 PHE CD1 C Y N 336 PHE CD2 C Y N 337 PHE CE1 C Y N 338 PHE CE2 C Y N 339 PHE CZ C Y N 340 PHE OXT O N N 341 PHE H H N N 342 PHE H2 H N N 343 PHE HA H N N 344 PHE HB2 H N N 345 PHE HB3 H N N 346 PHE HD1 H N N 347 PHE HD2 H N N 348 PHE HE1 H N N 349 PHE HE2 H N N 350 PHE HZ H N N 351 PHE HXT H N N 352 PRO N N N N 353 PRO CA C N S 354 PRO C C N N 355 PRO O O N N 356 PRO CB C N N 357 PRO CG C N N 358 PRO CD C N N 359 PRO OXT O N N 360 PRO H H N N 361 PRO HA H N N 362 PRO HB2 H N N 363 PRO HB3 H N N 364 PRO HG2 H N N 365 PRO HG3 H N N 366 PRO HD2 H N N 367 PRO HD3 H N N 368 PRO HXT H N N 369 SER N N N N 370 SER CA C N S 371 SER C C N N 372 SER O O N N 373 SER CB C N N 374 SER OG O N N 375 SER OXT O N N 376 SER H H N N 377 SER H2 H N N 378 SER HA H N N 379 SER HB2 H N N 380 SER HB3 H N N 381 SER HG H N N 382 SER HXT H N N 383 SO4 S S N N 384 SO4 O1 O N N 385 SO4 O2 O N N 386 SO4 O3 O N N 387 SO4 O4 O N N 388 THR N N N N 389 THR CA C N S 390 THR C C N N 391 THR O O N N 392 THR CB C N R 393 THR OG1 O N N 394 THR CG2 C N N 395 THR OXT O N N 396 THR H H N N 397 THR H2 H N N 398 THR HA H N N 399 THR HB H N N 400 THR HG1 H N N 401 THR HG21 H N N 402 THR HG22 H N N 403 THR HG23 H N N 404 THR HXT H N N 405 TYR N N N N 406 TYR CA C N S 407 TYR C C N N 408 TYR O O N N 409 TYR CB C N N 410 TYR CG C Y N 411 TYR CD1 C Y N 412 TYR CD2 C Y N 413 TYR CE1 C Y N 414 TYR CE2 C Y N 415 TYR CZ C Y N 416 TYR OH O N N 417 TYR OXT O N N 418 TYR H H N N 419 TYR H2 H N N 420 TYR HA H N N 421 TYR HB2 H N N 422 TYR HB3 H N N 423 TYR HD1 H N N 424 TYR HD2 H N N 425 TYR HE1 H N N 426 TYR HE2 H N N 427 TYR HH H N N 428 TYR HXT H N N 429 VAL N N N N 430 VAL CA C N S 431 VAL C C N N 432 VAL O O N N 433 VAL CB C N N 434 VAL CG1 C N N 435 VAL CG2 C N N 436 VAL OXT O N N 437 VAL H H N N 438 VAL H2 H N N 439 VAL HA H N N 440 VAL HB H N N 441 VAL HG11 H N N 442 VAL HG12 H N N 443 VAL HG13 H N N 444 VAL HG21 H N N 445 VAL HG22 H N N 446 VAL HG23 H N N 447 VAL HXT H N N 448 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2U6 C21 C20 sing N N 1 2U6 C21 C18 sing N N 2 2U6 C20 C18 sing N N 3 2U6 CL2 C14 sing N N 4 2U6 C13 C14 doub Y N 5 2U6 C13 C12 sing Y N 6 2U6 C18 C17 sing N N 7 2U6 C14 C15 sing Y N 8 2U6 C12 C5 doub Y N 9 2U6 C15 C16 doub Y N 10 2U6 C17 N1 sing N N 11 2U6 C17 C19 sing N N 12 2U6 C5 C16 sing Y N 13 2U6 C5 C1 sing N N 14 2U6 O2 C4 doub N N 15 2U6 N1 C4 sing N N 16 2U6 N1 C1 sing N N 17 2U6 C19 S1 sing N N 18 2U6 C4 C3 sing N N 19 2U6 C22 C3 sing N N 20 2U6 C22 C24 sing N N 21 2U6 C1 C2 sing N N 22 2U6 C3 O1 sing N N 23 2U6 C3 C23 sing N N 24 2U6 C2 O1 sing N N 25 2U6 C2 C6 sing N N 26 2U6 C24 C25 doub Y N 27 2U6 C24 N2 sing Y N 28 2U6 C25 C26 sing Y N 29 2U6 C11 C6 doub Y N 30 2U6 C11 C10 sing Y N 31 2U6 O5 S1 doub N N 32 2U6 CL1 C10 sing N N 33 2U6 S1 O6 doub N N 34 2U6 S1 C30 sing N N 35 2U6 C31 C30 sing N N 36 2U6 N2 C28 doub Y N 37 2U6 C26 C27 doub Y N 38 2U6 C6 C7 sing Y N 39 2U6 C10 C9 doub Y N 40 2U6 C28 C27 sing Y N 41 2U6 C27 C29 sing N N 42 2U6 C30 C33 sing N N 43 2U6 C30 C32 sing N N 44 2U6 C7 C8 doub Y N 45 2U6 C29 O3 doub N N 46 2U6 C29 O4 sing N N 47 2U6 C9 C8 sing Y N 48 2U6 C11 H1 sing N N 49 2U6 C9 H2 sing N N 50 2U6 C8 H3 sing N N 51 2U6 C7 H4 sing N N 52 2U6 C2 H5 sing N N 53 2U6 C22 H6 sing N N 54 2U6 C22 H7 sing N N 55 2U6 C25 H8 sing N N 56 2U6 C26 H9 sing N N 57 2U6 O4 H10 sing N N 58 2U6 C28 H11 sing N N 59 2U6 C23 H12 sing N N 60 2U6 C23 H13 sing N N 61 2U6 C23 H14 sing N N 62 2U6 C17 H15 sing N N 63 2U6 C18 H16 sing N N 64 2U6 C20 H17 sing N N 65 2U6 C20 H18 sing N N 66 2U6 C21 H19 sing N N 67 2U6 C21 H20 sing N N 68 2U6 C19 H21 sing N N 69 2U6 C19 H22 sing N N 70 2U6 C32 H23 sing N N 71 2U6 C32 H24 sing N N 72 2U6 C32 H25 sing N N 73 2U6 C33 H26 sing N N 74 2U6 C33 H27 sing N N 75 2U6 C33 H28 sing N N 76 2U6 C31 H29 sing N N 77 2U6 C31 H30 sing N N 78 2U6 C31 H31 sing N N 79 2U6 C1 H32 sing N N 80 2U6 C12 H33 sing N N 81 2U6 C13 H34 sing N N 82 2U6 C15 H35 sing N N 83 2U6 C16 H36 sing N N 84 ALA N CA sing N N 85 ALA N H sing N N 86 ALA N H2 sing N N 87 ALA CA C sing N N 88 ALA CA CB sing N N 89 ALA CA HA sing N N 90 ALA C O doub N N 91 ALA C OXT sing N N 92 ALA CB HB1 sing N N 93 ALA CB HB2 sing N N 94 ALA CB HB3 sing N N 95 ALA OXT HXT sing N N 96 ARG N CA sing N N 97 ARG N H sing N N 98 ARG N H2 sing N N 99 ARG CA C sing N N 100 ARG CA CB sing N N 101 ARG CA HA sing N N 102 ARG C O doub N N 103 ARG C OXT sing N N 104 ARG CB CG sing N N 105 ARG CB HB2 sing N N 106 ARG CB HB3 sing N N 107 ARG CG CD sing N N 108 ARG CG HG2 sing N N 109 ARG CG HG3 sing N N 110 ARG CD NE sing N N 111 ARG CD HD2 sing N N 112 ARG CD HD3 sing N N 113 ARG NE CZ sing N N 114 ARG NE HE sing N N 115 ARG CZ NH1 sing N N 116 ARG CZ NH2 doub N N 117 ARG NH1 HH11 sing N N 118 ARG NH1 HH12 sing N N 119 ARG NH2 HH21 sing N N 120 ARG NH2 HH22 sing N N 121 ARG OXT HXT sing N N 122 ASN N CA sing N N 123 ASN N H sing N N 124 ASN N H2 sing N N 125 ASN CA C sing N N 126 ASN CA CB sing N N 127 ASN CA HA sing N N 128 ASN C O doub N N 129 ASN C OXT sing N N 130 ASN CB CG sing N N 131 ASN CB HB2 sing N N 132 ASN CB HB3 sing N N 133 ASN CG OD1 doub N N 134 ASN CG ND2 sing N N 135 ASN ND2 HD21 sing N N 136 ASN ND2 HD22 sing N N 137 ASN OXT HXT sing N N 138 ASP N CA sing N N 139 ASP N H sing N N 140 ASP N H2 sing N N 141 ASP CA C sing N N 142 ASP CA CB sing N N 143 ASP CA HA sing N N 144 ASP C O doub N N 145 ASP C OXT sing N N 146 ASP CB CG sing N N 147 ASP CB HB2 sing N N 148 ASP CB HB3 sing N N 149 ASP CG OD1 doub N N 150 ASP CG OD2 sing N N 151 ASP OD2 HD2 sing N N 152 ASP OXT HXT sing N N 153 CYS N CA sing N N 154 CYS N H sing N N 155 CYS N H2 sing N N 156 CYS CA C sing N N 157 CYS CA CB sing N N 158 CYS CA HA sing N N 159 CYS C O doub N N 160 CYS C OXT sing N N 161 CYS CB SG sing N N 162 CYS CB HB2 sing N N 163 CYS CB HB3 sing N N 164 CYS SG HG sing N N 165 CYS OXT HXT sing N N 166 GLN N CA sing N N 167 GLN N H sing N N 168 GLN N H2 sing N N 169 GLN CA C sing N N 170 GLN CA CB sing N N 171 GLN CA HA sing N N 172 GLN C O doub N N 173 GLN C OXT sing N N 174 GLN CB CG sing N N 175 GLN CB HB2 sing N N 176 GLN CB HB3 sing N N 177 GLN CG CD sing N N 178 GLN CG HG2 sing N N 179 GLN CG HG3 sing N N 180 GLN CD OE1 doub N N 181 GLN CD NE2 sing N N 182 GLN NE2 HE21 sing N N 183 GLN NE2 HE22 sing N N 184 GLN OXT HXT sing N N 185 GLU N CA sing N N 186 GLU N H sing N N 187 GLU N H2 sing N N 188 GLU CA C sing N N 189 GLU CA CB sing N N 190 GLU CA HA sing N N 191 GLU C O doub N N 192 GLU C OXT sing N N 193 GLU CB CG sing N N 194 GLU CB HB2 sing N N 195 GLU CB HB3 sing N N 196 GLU CG CD sing N N 197 GLU CG HG2 sing N N 198 GLU CG HG3 sing N N 199 GLU CD OE1 doub N N 200 GLU CD OE2 sing N N 201 GLU OE2 HE2 sing N N 202 GLU OXT HXT sing N N 203 GLY N CA sing N N 204 GLY N H sing N N 205 GLY N H2 sing N N 206 GLY CA C sing N N 207 GLY CA HA2 sing N N 208 GLY CA HA3 sing N N 209 GLY C O doub N N 210 GLY C OXT sing N N 211 GLY OXT HXT sing N N 212 HIS N CA sing N N 213 HIS N H sing N N 214 HIS N H2 sing N N 215 HIS CA C sing N N 216 HIS CA CB sing N N 217 HIS CA HA sing N N 218 HIS C O doub N N 219 HIS C OXT sing N N 220 HIS CB CG sing N N 221 HIS CB HB2 sing N N 222 HIS CB HB3 sing N N 223 HIS CG ND1 sing Y N 224 HIS CG CD2 doub Y N 225 HIS ND1 CE1 doub Y N 226 HIS ND1 HD1 sing N N 227 HIS CD2 NE2 sing Y N 228 HIS CD2 HD2 sing N N 229 HIS CE1 NE2 sing Y N 230 HIS CE1 HE1 sing N N 231 HIS NE2 HE2 sing N N 232 HIS OXT HXT sing N N 233 HOH O H1 sing N N 234 HOH O H2 sing N N 235 ILE N CA sing N N 236 ILE N H sing N N 237 ILE N H2 sing N N 238 ILE CA C sing N N 239 ILE CA CB sing N N 240 ILE CA HA sing N N 241 ILE C O doub N N 242 ILE C OXT sing N N 243 ILE CB CG1 sing N N 244 ILE CB CG2 sing N N 245 ILE CB HB sing N N 246 ILE CG1 CD1 sing N N 247 ILE CG1 HG12 sing N N 248 ILE CG1 HG13 sing N N 249 ILE CG2 HG21 sing N N 250 ILE CG2 HG22 sing N N 251 ILE CG2 HG23 sing N N 252 ILE CD1 HD11 sing N N 253 ILE CD1 HD12 sing N N 254 ILE CD1 HD13 sing N N 255 ILE OXT HXT sing N N 256 LEU N CA sing N N 257 LEU N H sing N N 258 LEU N H2 sing N N 259 LEU CA C sing N N 260 LEU CA CB sing N N 261 LEU CA HA sing N N 262 LEU C O doub N N 263 LEU C OXT sing N N 264 LEU CB CG sing N N 265 LEU CB HB2 sing N N 266 LEU CB HB3 sing N N 267 LEU CG CD1 sing N N 268 LEU CG CD2 sing N N 269 LEU CG HG sing N N 270 LEU CD1 HD11 sing N N 271 LEU CD1 HD12 sing N N 272 LEU CD1 HD13 sing N N 273 LEU CD2 HD21 sing N N 274 LEU CD2 HD22 sing N N 275 LEU CD2 HD23 sing N N 276 LEU OXT HXT sing N N 277 LYS N CA sing N N 278 LYS N H sing N N 279 LYS N H2 sing N N 280 LYS CA C sing N N 281 LYS CA CB sing N N 282 LYS CA HA sing N N 283 LYS C O doub N N 284 LYS C OXT sing N N 285 LYS CB CG sing N N 286 LYS CB HB2 sing N N 287 LYS CB HB3 sing N N 288 LYS CG CD sing N N 289 LYS CG HG2 sing N N 290 LYS CG HG3 sing N N 291 LYS CD CE sing N N 292 LYS CD HD2 sing N N 293 LYS CD HD3 sing N N 294 LYS CE NZ sing N N 295 LYS CE HE2 sing N N 296 LYS CE HE3 sing N N 297 LYS NZ HZ1 sing N N 298 LYS NZ HZ2 sing N N 299 LYS NZ HZ3 sing N N 300 LYS OXT HXT sing N N 301 MET N CA sing N N 302 MET N H sing N N 303 MET N H2 sing N N 304 MET CA C sing N N 305 MET CA CB sing N N 306 MET CA HA sing N N 307 MET C O doub N N 308 MET C OXT sing N N 309 MET CB CG sing N N 310 MET CB HB2 sing N N 311 MET CB HB3 sing N N 312 MET CG SD sing N N 313 MET CG HG2 sing N N 314 MET CG HG3 sing N N 315 MET SD CE sing N N 316 MET CE HE1 sing N N 317 MET CE HE2 sing N N 318 MET CE HE3 sing N N 319 MET OXT HXT sing N N 320 PHE N CA sing N N 321 PHE N H sing N N 322 PHE N H2 sing N N 323 PHE CA C sing N N 324 PHE CA CB sing N N 325 PHE CA HA sing N N 326 PHE C O doub N N 327 PHE C OXT sing N N 328 PHE CB CG sing N N 329 PHE CB HB2 sing N N 330 PHE CB HB3 sing N N 331 PHE CG CD1 doub Y N 332 PHE CG CD2 sing Y N 333 PHE CD1 CE1 sing Y N 334 PHE CD1 HD1 sing N N 335 PHE CD2 CE2 doub Y N 336 PHE CD2 HD2 sing N N 337 PHE CE1 CZ doub Y N 338 PHE CE1 HE1 sing N N 339 PHE CE2 CZ sing Y N 340 PHE CE2 HE2 sing N N 341 PHE CZ HZ sing N N 342 PHE OXT HXT sing N N 343 PRO N CA sing N N 344 PRO N CD sing N N 345 PRO N H sing N N 346 PRO CA C sing N N 347 PRO CA CB sing N N 348 PRO CA HA sing N N 349 PRO C O doub N N 350 PRO C OXT sing N N 351 PRO CB CG sing N N 352 PRO CB HB2 sing N N 353 PRO CB HB3 sing N N 354 PRO CG CD sing N N 355 PRO CG HG2 sing N N 356 PRO CG HG3 sing N N 357 PRO CD HD2 sing N N 358 PRO CD HD3 sing N N 359 PRO OXT HXT sing N N 360 SER N CA sing N N 361 SER N H sing N N 362 SER N H2 sing N N 363 SER CA C sing N N 364 SER CA CB sing N N 365 SER CA HA sing N N 366 SER C O doub N N 367 SER C OXT sing N N 368 SER CB OG sing N N 369 SER CB HB2 sing N N 370 SER CB HB3 sing N N 371 SER OG HG sing N N 372 SER OXT HXT sing N N 373 SO4 S O1 doub N N 374 SO4 S O2 doub N N 375 SO4 S O3 sing N N 376 SO4 S O4 sing N N 377 THR N CA sing N N 378 THR N H sing N N 379 THR N H2 sing N N 380 THR CA C sing N N 381 THR CA CB sing N N 382 THR CA HA sing N N 383 THR C O doub N N 384 THR C OXT sing N N 385 THR CB OG1 sing N N 386 THR CB CG2 sing N N 387 THR CB HB sing N N 388 THR OG1 HG1 sing N N 389 THR CG2 HG21 sing N N 390 THR CG2 HG22 sing N N 391 THR CG2 HG23 sing N N 392 THR OXT HXT sing N N 393 TYR N CA sing N N 394 TYR N H sing N N 395 TYR N H2 sing N N 396 TYR CA C sing N N 397 TYR CA CB sing N N 398 TYR CA HA sing N N 399 TYR C O doub N N 400 TYR C OXT sing N N 401 TYR CB CG sing N N 402 TYR CB HB2 sing N N 403 TYR CB HB3 sing N N 404 TYR CG CD1 doub Y N 405 TYR CG CD2 sing Y N 406 TYR CD1 CE1 sing Y N 407 TYR CD1 HD1 sing N N 408 TYR CD2 CE2 doub Y N 409 TYR CD2 HD2 sing N N 410 TYR CE1 CZ doub Y N 411 TYR CE1 HE1 sing N N 412 TYR CE2 CZ sing Y N 413 TYR CE2 HE2 sing N N 414 TYR CZ OH sing N N 415 TYR OH HH sing N N 416 TYR OXT HXT sing N N 417 VAL N CA sing N N 418 VAL N H sing N N 419 VAL N H2 sing N N 420 VAL CA C sing N N 421 VAL CA CB sing N N 422 VAL CA HA sing N N 423 VAL C O doub N N 424 VAL C OXT sing N N 425 VAL CB CG1 sing N N 426 VAL CB CG2 sing N N 427 VAL CB HB sing N N 428 VAL CG1 HG11 sing N N 429 VAL CG1 HG12 sing N N 430 VAL CG1 HG13 sing N N 431 VAL CG2 HG21 sing N N 432 VAL CG2 HG22 sing N N 433 VAL CG2 HG23 sing N N 434 VAL OXT HXT sing N N 435 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;6-{[(2R,5R,6R)-4-[(1S)-2-(tert-butylsulfonyl)-1-cyclopropylethyl]-6-(3-chlorophenyl)-5-(4-chlorophenyl)-2-methyl-3-oxomorpholin-2-yl]methyl}pyridine-3-carboxylic acid ; 2U6 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4ERF _pdbx_initial_refinement_model.details 'PDB Entry 4ERF' #