data_4OI9 # _entry.id 4OI9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4OI9 pdb_00004oi9 10.2210/pdb4oi9/pdb RCSB RCSB084526 ? ? WWPDB D_1000084526 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-16 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 2 1 2024-11-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Data collection' 4 2 'Structure model' 'Derived calculations' 5 2 'Structure model' 'Structure summary' 6 3 'Structure model' 'Data collection' 7 3 'Structure model' 'Database references' 8 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' pdbx_branch_scheme 5 2 'Structure model' pdbx_chem_comp_identifier 6 2 'Structure model' pdbx_entity_branch 7 2 'Structure model' pdbx_entity_branch_descriptor 8 2 'Structure model' pdbx_entity_branch_link 9 2 'Structure model' pdbx_entity_branch_list 10 2 'Structure model' pdbx_entity_nonpoly 11 2 'Structure model' pdbx_nonpoly_scheme 12 2 'Structure model' pdbx_struct_assembly_gen 13 2 'Structure model' pdbx_validate_close_contact 14 2 'Structure model' struct_asym 15 2 'Structure model' struct_conn 16 2 'Structure model' struct_site 17 2 'Structure model' struct_site_gen 18 3 'Structure model' chem_comp 19 3 'Structure model' chem_comp_atom 20 3 'Structure model' chem_comp_bond 21 3 'Structure model' database_2 22 3 'Structure model' pdbx_entry_details 23 3 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_asym_id' 10 2 'Structure model' '_atom_site.label_atom_id' 11 2 'Structure model' '_atom_site.label_comp_id' 12 2 'Structure model' '_atom_site.label_entity_id' 13 2 'Structure model' '_atom_site.type_symbol' 14 2 'Structure model' '_chem_comp.name' 15 2 'Structure model' '_chem_comp.type' 16 2 'Structure model' '_entity.formula_weight' 17 2 'Structure model' '_entity.pdbx_description' 18 2 'Structure model' '_entity.pdbx_number_of_molecules' 19 2 'Structure model' '_entity.type' 20 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 21 2 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 22 2 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 23 2 'Structure model' '_struct_conn.pdbx_dist_value' 24 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 2 'Structure model' '_struct_conn.pdbx_role' 26 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 3 'Structure model' '_chem_comp.pdbx_synonyms' 39 3 'Structure model' '_database_2.pdbx_DOI' 40 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4OI9 _pdbx_database_status.recvd_initial_deposition_date 2014-01-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4OIA . unspecified PDB 4OIB . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Recacha, R.' 1 'Jimenez, D.' 2 'Tian, L.' 3 'Barredo, R.' 4 'Ghamberg, C.' 5 'Casasnovas, J.M.' 6 # _citation.id primary _citation.title 'Crystal structures of an ICAM-5 ectodomain fragment show electrostatic-based homophilic adhesions.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 70 _citation.page_first 1934 _citation.page_last 1943 _citation.year 2014 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25004970 _citation.pdbx_database_id_DOI 10.1107/S1399004714009468 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Recacha, R.' 1 ? primary 'Jimenez, D.' 2 ? primary 'Tian, L.' 3 ? primary 'Barredo, R.' 4 ? primary 'Gahmberg, C.G.' 5 ? primary 'Casasnovas, J.M.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Intercellular adhesion molecule 5' 41311.652 1 ? ? D1-D4 ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 3 ? ? ? ? 3 branched man ;alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 748.682 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 5 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 31 ? ? ? ? 6 water nat water 18.015 97 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ICAM-5, Telencephalin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EPFWADLQPRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQAR GLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARRED HGANFSCRAELDLRPHGLGLFENSSAPRELRTFSLSPDAPRLAAPRLLEVGSERPVSCTLDGLFPASEARVYLALGDQNL SPDVTLEGDAFVATATATASAEQEGARQLVCNVTLGGENRETRENVTIYSFPAPLLTLSEPSVSEGQMVTVTCAAGAQAL VTLEGVPAAVPGQPAQLQLNATENDDRRSFFCDATLDVDGETLIKNRSAELRVLYAPR ; _entity_poly.pdbx_seq_one_letter_code_can ;EPFWADLQPRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQAR GLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARRED HGANFSCRAELDLRPHGLGLFENSSAPRELRTFSLSPDAPRLAAPRLLEVGSERPVSCTLDGLFPASEARVYLALGDQNL SPDVTLEGDAFVATATATASAEQEGARQLVCNVTLGGENRETRENVTIYSFPAPLLTLSEPSVSEGQMVTVTCAAGAQAL VTLEGVPAAVPGQPAQLQLNATENDDRRSFFCDATLDVDGETLIKNRSAELRVLYAPR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 1,2-ETHANEDIOL EDO 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 PRO n 1 3 PHE n 1 4 TRP n 1 5 ALA n 1 6 ASP n 1 7 LEU n 1 8 GLN n 1 9 PRO n 1 10 ARG n 1 11 VAL n 1 12 ALA n 1 13 PHE n 1 14 VAL n 1 15 GLU n 1 16 ARG n 1 17 GLY n 1 18 GLY n 1 19 SER n 1 20 LEU n 1 21 TRP n 1 22 LEU n 1 23 ASN n 1 24 CYS n 1 25 SER n 1 26 THR n 1 27 ASN n 1 28 CYS n 1 29 PRO n 1 30 ARG n 1 31 PRO n 1 32 GLU n 1 33 ARG n 1 34 GLY n 1 35 GLY n 1 36 LEU n 1 37 GLU n 1 38 THR n 1 39 SER n 1 40 LEU n 1 41 ARG n 1 42 ARG n 1 43 ASN n 1 44 GLY n 1 45 THR n 1 46 GLN n 1 47 ARG n 1 48 GLY n 1 49 LEU n 1 50 ARG n 1 51 TRP n 1 52 LEU n 1 53 ALA n 1 54 ARG n 1 55 GLN n 1 56 LEU n 1 57 VAL n 1 58 ASP n 1 59 ILE n 1 60 ARG n 1 61 GLU n 1 62 PRO n 1 63 GLU n 1 64 THR n 1 65 GLN n 1 66 PRO n 1 67 VAL n 1 68 CYS n 1 69 PHE n 1 70 PHE n 1 71 ARG n 1 72 CYS n 1 73 ALA n 1 74 ARG n 1 75 ARG n 1 76 THR n 1 77 LEU n 1 78 GLN n 1 79 ALA n 1 80 ARG n 1 81 GLY n 1 82 LEU n 1 83 ILE n 1 84 ARG n 1 85 THR n 1 86 PHE n 1 87 GLN n 1 88 ARG n 1 89 PRO n 1 90 ASP n 1 91 ARG n 1 92 VAL n 1 93 GLU n 1 94 LEU n 1 95 MET n 1 96 PRO n 1 97 LEU n 1 98 PRO n 1 99 PRO n 1 100 TRP n 1 101 GLN n 1 102 PRO n 1 103 VAL n 1 104 GLY n 1 105 GLU n 1 106 ASN n 1 107 PHE n 1 108 THR n 1 109 LEU n 1 110 SER n 1 111 CYS n 1 112 ARG n 1 113 VAL n 1 114 PRO n 1 115 GLY n 1 116 ALA n 1 117 GLY n 1 118 PRO n 1 119 ARG n 1 120 ALA n 1 121 SER n 1 122 LEU n 1 123 THR n 1 124 LEU n 1 125 THR n 1 126 LEU n 1 127 LEU n 1 128 ARG n 1 129 GLY n 1 130 ALA n 1 131 GLN n 1 132 GLU n 1 133 LEU n 1 134 ILE n 1 135 ARG n 1 136 ARG n 1 137 SER n 1 138 PHE n 1 139 ALA n 1 140 GLY n 1 141 GLU n 1 142 PRO n 1 143 PRO n 1 144 ARG n 1 145 ALA n 1 146 ARG n 1 147 GLY n 1 148 ALA n 1 149 VAL n 1 150 LEU n 1 151 THR n 1 152 ALA n 1 153 THR n 1 154 VAL n 1 155 LEU n 1 156 ALA n 1 157 ARG n 1 158 ARG n 1 159 GLU n 1 160 ASP n 1 161 HIS n 1 162 GLY n 1 163 ALA n 1 164 ASN n 1 165 PHE n 1 166 SER n 1 167 CYS n 1 168 ARG n 1 169 ALA n 1 170 GLU n 1 171 LEU n 1 172 ASP n 1 173 LEU n 1 174 ARG n 1 175 PRO n 1 176 HIS n 1 177 GLY n 1 178 LEU n 1 179 GLY n 1 180 LEU n 1 181 PHE n 1 182 GLU n 1 183 ASN n 1 184 SER n 1 185 SER n 1 186 ALA n 1 187 PRO n 1 188 ARG n 1 189 GLU n 1 190 LEU n 1 191 ARG n 1 192 THR n 1 193 PHE n 1 194 SER n 1 195 LEU n 1 196 SER n 1 197 PRO n 1 198 ASP n 1 199 ALA n 1 200 PRO n 1 201 ARG n 1 202 LEU n 1 203 ALA n 1 204 ALA n 1 205 PRO n 1 206 ARG n 1 207 LEU n 1 208 LEU n 1 209 GLU n 1 210 VAL n 1 211 GLY n 1 212 SER n 1 213 GLU n 1 214 ARG n 1 215 PRO n 1 216 VAL n 1 217 SER n 1 218 CYS n 1 219 THR n 1 220 LEU n 1 221 ASP n 1 222 GLY n 1 223 LEU n 1 224 PHE n 1 225 PRO n 1 226 ALA n 1 227 SER n 1 228 GLU n 1 229 ALA n 1 230 ARG n 1 231 VAL n 1 232 TYR n 1 233 LEU n 1 234 ALA n 1 235 LEU n 1 236 GLY n 1 237 ASP n 1 238 GLN n 1 239 ASN n 1 240 LEU n 1 241 SER n 1 242 PRO n 1 243 ASP n 1 244 VAL n 1 245 THR n 1 246 LEU n 1 247 GLU n 1 248 GLY n 1 249 ASP n 1 250 ALA n 1 251 PHE n 1 252 VAL n 1 253 ALA n 1 254 THR n 1 255 ALA n 1 256 THR n 1 257 ALA n 1 258 THR n 1 259 ALA n 1 260 SER n 1 261 ALA n 1 262 GLU n 1 263 GLN n 1 264 GLU n 1 265 GLY n 1 266 ALA n 1 267 ARG n 1 268 GLN n 1 269 LEU n 1 270 VAL n 1 271 CYS n 1 272 ASN n 1 273 VAL n 1 274 THR n 1 275 LEU n 1 276 GLY n 1 277 GLY n 1 278 GLU n 1 279 ASN n 1 280 ARG n 1 281 GLU n 1 282 THR n 1 283 ARG n 1 284 GLU n 1 285 ASN n 1 286 VAL n 1 287 THR n 1 288 ILE n 1 289 TYR n 1 290 SER n 1 291 PHE n 1 292 PRO n 1 293 ALA n 1 294 PRO n 1 295 LEU n 1 296 LEU n 1 297 THR n 1 298 LEU n 1 299 SER n 1 300 GLU n 1 301 PRO n 1 302 SER n 1 303 VAL n 1 304 SER n 1 305 GLU n 1 306 GLY n 1 307 GLN n 1 308 MET n 1 309 VAL n 1 310 THR n 1 311 VAL n 1 312 THR n 1 313 CYS n 1 314 ALA n 1 315 ALA n 1 316 GLY n 1 317 ALA n 1 318 GLN n 1 319 ALA n 1 320 LEU n 1 321 VAL n 1 322 THR n 1 323 LEU n 1 324 GLU n 1 325 GLY n 1 326 VAL n 1 327 PRO n 1 328 ALA n 1 329 ALA n 1 330 VAL n 1 331 PRO n 1 332 GLY n 1 333 GLN n 1 334 PRO n 1 335 ALA n 1 336 GLN n 1 337 LEU n 1 338 GLN n 1 339 LEU n 1 340 ASN n 1 341 ALA n 1 342 THR n 1 343 GLU n 1 344 ASN n 1 345 ASP n 1 346 ASP n 1 347 ARG n 1 348 ARG n 1 349 SER n 1 350 PHE n 1 351 PHE n 1 352 CYS n 1 353 ASP n 1 354 ALA n 1 355 THR n 1 356 LEU n 1 357 ASP n 1 358 VAL n 1 359 ASP n 1 360 GLY n 1 361 GLU n 1 362 THR n 1 363 LEU n 1 364 ILE n 1 365 LYS n 1 366 ASN n 1 367 ARG n 1 368 SER n 1 369 ALA n 1 370 GLU n 1 371 LEU n 1 372 ARG n 1 373 VAL n 1 374 LEU n 1 375 TYR n 1 376 ALA n 1 377 PRO n 1 378 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ICAM5, TLCN, TLN' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? 4 3 DManpa1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c3-d1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 3 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 4 3 4 MAN C1 O1 3 BMA O3 HO3 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 TRP 4 4 4 TRP TRP A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 TRP 21 21 21 TRP TRP A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 CYS 28 28 28 CYS CYS A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 TRP 51 51 51 TRP TRP A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 CYS 68 68 68 CYS CYS A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 CYS 72 72 72 CYS CYS A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 ARG 88 88 88 ARG ARG A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 MET 95 95 95 MET MET A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 PRO 99 99 99 PRO PRO A . n A 1 100 TRP 100 100 100 TRP TRP A . n A 1 101 GLN 101 101 101 GLN GLN A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 PHE 107 107 107 PHE PHE A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 CYS 111 111 111 CYS CYS A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 GLN 131 131 131 GLN GLN A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 SER 137 137 137 SER SER A . n A 1 138 PHE 138 138 138 PHE PHE A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 ARG 146 146 146 ARG ARG A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 VAL 149 149 149 VAL VAL A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 ARG 158 158 158 ARG ARG A . n A 1 159 GLU 159 159 159 GLU GLU A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 HIS 161 161 161 HIS HIS A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 PHE 165 165 165 PHE PHE A . n A 1 166 SER 166 166 166 SER SER A . n A 1 167 CYS 167 167 167 CYS CYS A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ASP 172 172 172 ASP ASP A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 HIS 176 176 176 HIS HIS A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 ASN 183 183 183 ASN ASN A . n A 1 184 SER 184 184 184 SER SER A . n A 1 185 SER 185 185 185 SER SER A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 PRO 187 187 187 PRO PRO A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 GLU 189 189 189 GLU GLU A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 ARG 191 191 191 ARG ARG A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 SER 196 196 196 SER SER A . n A 1 197 PRO 197 197 197 PRO PRO A . n A 1 198 ASP 198 198 198 ASP ASP A . n A 1 199 ALA 199 199 199 ALA ALA A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 ARG 201 201 201 ARG ARG A . n A 1 202 LEU 202 202 202 LEU LEU A . n A 1 203 ALA 203 203 203 ALA ALA A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 PRO 205 205 205 PRO PRO A . n A 1 206 ARG 206 206 206 ARG ARG A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 GLU 209 209 209 GLU GLU A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 SER 212 212 212 SER SER A . n A 1 213 GLU 213 213 213 GLU GLU A . n A 1 214 ARG 214 214 214 ARG ARG A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 VAL 216 216 216 VAL VAL A . n A 1 217 SER 217 217 217 SER SER A . n A 1 218 CYS 218 218 218 CYS CYS A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 LEU 220 220 220 LEU LEU A . n A 1 221 ASP 221 221 221 ASP ASP A . n A 1 222 GLY 222 222 222 GLY GLY A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 PHE 224 224 224 PHE PHE A . n A 1 225 PRO 225 225 225 PRO PRO A . n A 1 226 ALA 226 226 226 ALA ALA A . n A 1 227 SER 227 227 227 SER SER A . n A 1 228 GLU 228 228 228 GLU GLU A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 ARG 230 230 230 ARG ARG A . n A 1 231 VAL 231 231 231 VAL VAL A . n A 1 232 TYR 232 232 232 TYR TYR A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 ALA 234 234 234 ALA ALA A . n A 1 235 LEU 235 235 235 LEU LEU A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 ASP 237 237 237 ASP ASP A . n A 1 238 GLN 238 238 238 GLN GLN A . n A 1 239 ASN 239 239 239 ASN ASN A . n A 1 240 LEU 240 240 240 LEU LEU A . n A 1 241 SER 241 241 241 SER SER A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 ASP 243 243 243 ASP ASP A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 THR 245 245 245 THR THR A . n A 1 246 LEU 246 246 246 LEU LEU A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 GLY 248 248 248 GLY GLY A . n A 1 249 ASP 249 249 249 ASP ASP A . n A 1 250 ALA 250 250 250 ALA ALA A . n A 1 251 PHE 251 251 251 PHE PHE A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 ALA 253 253 253 ALA ALA A . n A 1 254 THR 254 254 254 THR THR A . n A 1 255 ALA 255 255 255 ALA ALA A . n A 1 256 THR 256 256 256 THR THR A . n A 1 257 ALA 257 257 257 ALA ALA A . n A 1 258 THR 258 258 258 THR THR A . n A 1 259 ALA 259 259 259 ALA ALA A . n A 1 260 SER 260 260 260 SER SER A . n A 1 261 ALA 261 261 261 ALA ALA A . n A 1 262 GLU 262 262 262 GLU GLU A . n A 1 263 GLN 263 263 263 GLN ALA A . n A 1 264 GLU 264 264 264 GLU ALA A . n A 1 265 GLY 265 265 265 GLY GLY A . n A 1 266 ALA 266 266 266 ALA ALA A . n A 1 267 ARG 267 267 267 ARG ARG A . n A 1 268 GLN 268 268 268 GLN GLN A . n A 1 269 LEU 269 269 269 LEU LEU A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 CYS 271 271 271 CYS CYS A . n A 1 272 ASN 272 272 272 ASN ASN A . n A 1 273 VAL 273 273 273 VAL VAL A . n A 1 274 THR 274 274 274 THR THR A . n A 1 275 LEU 275 275 275 LEU LEU A . n A 1 276 GLY 276 276 276 GLY GLY A . n A 1 277 GLY 277 277 277 GLY GLY A . n A 1 278 GLU 278 278 278 GLU GLU A . n A 1 279 ASN 279 279 279 ASN ASN A . n A 1 280 ARG 280 280 280 ARG ARG A . n A 1 281 GLU 281 281 281 GLU GLU A . n A 1 282 THR 282 282 282 THR THR A . n A 1 283 ARG 283 283 283 ARG ARG A . n A 1 284 GLU 284 284 284 GLU GLU A . n A 1 285 ASN 285 285 285 ASN ASN A . n A 1 286 VAL 286 286 286 VAL VAL A . n A 1 287 THR 287 287 287 THR THR A . n A 1 288 ILE 288 288 288 ILE ILE A . n A 1 289 TYR 289 289 289 TYR TYR A . n A 1 290 SER 290 290 290 SER SER A . n A 1 291 PHE 291 291 291 PHE PHE A . n A 1 292 PRO 292 292 292 PRO PRO A . n A 1 293 ALA 293 293 293 ALA ALA A . n A 1 294 PRO 294 294 294 PRO PRO A . n A 1 295 LEU 295 295 295 LEU LEU A . n A 1 296 LEU 296 296 296 LEU LEU A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 LEU 298 298 298 LEU LEU A . n A 1 299 SER 299 299 299 SER SER A . n A 1 300 GLU 300 300 300 GLU GLU A . n A 1 301 PRO 301 301 301 PRO PRO A . n A 1 302 SER 302 302 302 SER SER A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 SER 304 304 304 SER SER A . n A 1 305 GLU 305 305 305 GLU GLU A . n A 1 306 GLY 306 306 306 GLY GLY A . n A 1 307 GLN 307 307 307 GLN GLN A . n A 1 308 MET 308 308 308 MET MET A . n A 1 309 VAL 309 309 309 VAL VAL A . n A 1 310 THR 310 310 310 THR THR A . n A 1 311 VAL 311 311 311 VAL VAL A . n A 1 312 THR 312 312 312 THR THR A . n A 1 313 CYS 313 313 313 CYS CYS A . n A 1 314 ALA 314 314 314 ALA ALA A . n A 1 315 ALA 315 315 315 ALA ALA A . n A 1 316 GLY 316 316 316 GLY GLY A . n A 1 317 ALA 317 317 317 ALA ALA A . n A 1 318 GLN 318 318 318 GLN GLN A . n A 1 319 ALA 319 319 319 ALA ALA A . n A 1 320 LEU 320 320 320 LEU LEU A . n A 1 321 VAL 321 321 321 VAL VAL A . n A 1 322 THR 322 322 322 THR THR A . n A 1 323 LEU 323 323 323 LEU LEU A . n A 1 324 GLU 324 324 324 GLU GLU A . n A 1 325 GLY 325 325 325 GLY GLY A . n A 1 326 VAL 326 326 326 VAL VAL A . n A 1 327 PRO 327 327 327 PRO PRO A . n A 1 328 ALA 328 328 328 ALA ALA A . n A 1 329 ALA 329 329 329 ALA ALA A . n A 1 330 VAL 330 330 330 VAL VAL A . n A 1 331 PRO 331 331 331 PRO PRO A . n A 1 332 GLY 332 332 332 GLY GLY A . n A 1 333 GLN 333 333 333 GLN GLN A . n A 1 334 PRO 334 334 334 PRO PRO A . n A 1 335 ALA 335 335 335 ALA ALA A . n A 1 336 GLN 336 336 336 GLN GLN A . n A 1 337 LEU 337 337 337 LEU LEU A . n A 1 338 GLN 338 338 338 GLN GLN A . n A 1 339 LEU 339 339 339 LEU LEU A . n A 1 340 ASN 340 340 340 ASN ASN A . n A 1 341 ALA 341 341 341 ALA ALA A . n A 1 342 THR 342 342 342 THR THR A . n A 1 343 GLU 343 343 343 GLU GLU A . n A 1 344 ASN 344 344 344 ASN ASN A . n A 1 345 ASP 345 345 345 ASP ASP A . n A 1 346 ASP 346 346 346 ASP ASP A . n A 1 347 ARG 347 347 347 ARG ARG A . n A 1 348 ARG 348 348 348 ARG ARG A . n A 1 349 SER 349 349 349 SER SER A . n A 1 350 PHE 350 350 350 PHE PHE A . n A 1 351 PHE 351 351 351 PHE PHE A . n A 1 352 CYS 352 352 352 CYS CYS A . n A 1 353 ASP 353 353 353 ASP ASP A . n A 1 354 ALA 354 354 354 ALA ALA A . n A 1 355 THR 355 355 355 THR THR A . n A 1 356 LEU 356 356 356 LEU LEU A . n A 1 357 ASP 357 357 357 ASP ASP A . n A 1 358 VAL 358 358 358 VAL VAL A . n A 1 359 ASP 359 359 359 ASP ASP A . n A 1 360 GLY 360 360 360 GLY GLY A . n A 1 361 GLU 361 361 361 GLU GLU A . n A 1 362 THR 362 362 362 THR THR A . n A 1 363 LEU 363 363 363 LEU LEU A . n A 1 364 ILE 364 364 364 ILE ILE A . n A 1 365 LYS 365 365 365 LYS LYS A . n A 1 366 ASN 366 366 366 ASN ASN A . n A 1 367 ARG 367 367 367 ARG ARG A . n A 1 368 SER 368 368 368 SER SER A . n A 1 369 ALA 369 369 369 ALA ALA A . n A 1 370 GLU 370 370 370 GLU GLU A . n A 1 371 LEU 371 371 371 LEU LEU A . n A 1 372 ARG 372 372 372 ARG ARG A . n A 1 373 VAL 373 373 373 VAL VAL A . n A 1 374 LEU 374 374 374 LEU LEU A . n A 1 375 TYR 375 375 375 TYR TYR A . n A 1 376 ALA 376 376 376 ALA ALA A . n A 1 377 PRO 377 377 377 PRO PRO A . n A 1 378 ARG 378 378 378 ARG ARG A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 2301 n B 2 NAG 2 B NAG 2 A NAG 2302 n C 2 NAG 1 C NAG 1 A NAG 1831 n C 2 NAG 2 C NAG 2 A NAG 1832 n D 3 NAG 1 D NAG 1 A NAG 2851 n D 3 NAG 2 D NAG 2 A NAG 2852 n D 3 BMA 3 D BMA 3 A BMA 2853 n D 3 MAN 4 D MAN 4 A MAN 2854 n E 2 NAG 1 E NAG 1 A NAG 2721 n E 2 NAG 2 E NAG 2 A NAG 2722 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 NAG 1 2303 4301 NAG NAG A . G 4 NAG 1 2304 1061 NAG NAG A . H 4 NAG 1 2305 1641 NAG NAG A . I 4 NAG 1 2312 3401 NAG NAG A . J 4 NAG 1 2315 3661 NAG NAG A . K 5 EDO 1 2316 1 EDO EDO A . L 5 EDO 1 2317 2 EDO EDO A . M 5 EDO 1 2318 3 EDO EDO A . N 5 EDO 1 2319 4 EDO EDO A . O 5 EDO 1 2320 5 EDO EDO A . P 5 EDO 1 2321 6 EDO EDO A . Q 5 EDO 1 2322 7 EDO EDO A . R 5 EDO 1 2323 8 EDO EDO A . S 5 EDO 1 2324 9 EDO EDO A . T 5 EDO 1 2325 10 EDO EDO A . U 5 EDO 1 2326 11 EDO EDO A . V 5 EDO 1 2327 12 EDO EDO A . W 5 EDO 1 2328 13 EDO EDO A . X 5 EDO 1 2329 14 EDO EDO A . Y 5 EDO 1 2330 15 EDO EDO A . Z 5 EDO 1 2331 16 EDO EDO A . AA 5 EDO 1 2332 17 EDO EDO A . BA 5 EDO 1 2333 18 EDO EDO A . CA 5 EDO 1 2334 19 EDO EDO A . DA 5 EDO 1 2335 20 EDO EDO A . EA 5 EDO 1 2336 21 EDO EDO A . FA 5 EDO 1 2337 22 EDO EDO A . GA 5 EDO 1 2338 23 EDO EDO A . HA 5 EDO 1 2339 24 EDO EDO A . IA 5 EDO 1 2340 25 EDO EDO A . JA 5 EDO 1 2341 26 EDO EDO A . KA 5 EDO 1 2342 27 EDO EDO A . LA 5 EDO 1 2343 28 EDO EDO A . MA 5 EDO 1 2344 29 EDO EDO A . NA 5 EDO 1 2345 30 EDO EDO A . OA 5 EDO 1 2346 31 EDO EDO A . PA 6 HOH 1 2401 1 HOH HOH A . PA 6 HOH 2 2402 2 HOH HOH A . PA 6 HOH 3 2403 3 HOH HOH A . PA 6 HOH 4 2404 4 HOH HOH A . PA 6 HOH 5 2405 5 HOH HOH A . PA 6 HOH 6 2406 6 HOH HOH A . PA 6 HOH 7 2407 7 HOH HOH A . PA 6 HOH 8 2408 8 HOH HOH A . PA 6 HOH 9 2409 9 HOH HOH A . PA 6 HOH 10 2410 10 HOH HOH A . PA 6 HOH 11 2411 11 HOH HOH A . PA 6 HOH 12 2412 12 HOH HOH A . PA 6 HOH 13 2413 13 HOH HOH A . PA 6 HOH 14 2414 14 HOH HOH A . PA 6 HOH 15 2415 15 HOH HOH A . PA 6 HOH 16 2416 16 HOH HOH A . PA 6 HOH 17 2417 17 HOH HOH A . PA 6 HOH 18 2418 19 HOH HOH A . PA 6 HOH 19 2419 20 HOH HOH A . PA 6 HOH 20 2420 21 HOH HOH A . PA 6 HOH 21 2421 22 HOH HOH A . PA 6 HOH 22 2422 23 HOH HOH A . PA 6 HOH 23 2423 24 HOH HOH A . PA 6 HOH 24 2424 25 HOH HOH A . PA 6 HOH 25 2425 26 HOH HOH A . PA 6 HOH 26 2426 27 HOH HOH A . PA 6 HOH 27 2427 28 HOH HOH A . PA 6 HOH 28 2428 29 HOH HOH A . PA 6 HOH 29 2429 30 HOH HOH A . PA 6 HOH 30 2430 31 HOH HOH A . PA 6 HOH 31 2431 32 HOH HOH A . PA 6 HOH 32 2432 33 HOH HOH A . PA 6 HOH 33 2433 34 HOH HOH A . PA 6 HOH 34 2434 35 HOH HOH A . PA 6 HOH 35 2435 36 HOH HOH A . PA 6 HOH 36 2436 37 HOH HOH A . PA 6 HOH 37 2437 38 HOH HOH A . PA 6 HOH 38 2438 40 HOH HOH A . PA 6 HOH 39 2439 41 HOH HOH A . PA 6 HOH 40 2440 42 HOH HOH A . PA 6 HOH 41 2441 43 HOH HOH A . PA 6 HOH 42 2442 44 HOH HOH A . PA 6 HOH 43 2443 45 HOH HOH A . PA 6 HOH 44 2444 46 HOH HOH A . PA 6 HOH 45 2445 48 HOH HOH A . PA 6 HOH 46 2446 49 HOH HOH A . PA 6 HOH 47 2447 50 HOH HOH A . PA 6 HOH 48 2448 51 HOH HOH A . PA 6 HOH 49 2449 52 HOH HOH A . PA 6 HOH 50 2450 53 HOH HOH A . PA 6 HOH 51 2451 54 HOH HOH A . PA 6 HOH 52 2452 55 HOH HOH A . PA 6 HOH 53 2453 56 HOH HOH A . PA 6 HOH 54 2454 57 HOH HOH A . PA 6 HOH 55 2455 58 HOH HOH A . PA 6 HOH 56 2456 59 HOH HOH A . PA 6 HOH 57 2457 60 HOH HOH A . PA 6 HOH 58 2458 61 HOH HOH A . PA 6 HOH 59 2459 62 HOH HOH A . PA 6 HOH 60 2460 63 HOH HOH A . PA 6 HOH 61 2461 64 HOH HOH A . PA 6 HOH 62 2462 65 HOH HOH A . PA 6 HOH 63 2463 67 HOH HOH A . PA 6 HOH 64 2464 68 HOH HOH A . PA 6 HOH 65 2465 69 HOH HOH A . PA 6 HOH 66 2466 70 HOH HOH A . PA 6 HOH 67 2467 71 HOH HOH A . PA 6 HOH 68 2468 72 HOH HOH A . PA 6 HOH 69 2469 73 HOH HOH A . PA 6 HOH 70 2470 74 HOH HOH A . PA 6 HOH 71 2471 75 HOH HOH A . PA 6 HOH 72 2472 76 HOH HOH A . PA 6 HOH 73 2473 77 HOH HOH A . PA 6 HOH 74 2474 78 HOH HOH A . PA 6 HOH 75 2475 79 HOH HOH A . PA 6 HOH 76 2476 80 HOH HOH A . PA 6 HOH 77 2477 81 HOH HOH A . PA 6 HOH 78 2478 82 HOH HOH A . PA 6 HOH 79 2479 83 HOH HOH A . PA 6 HOH 80 2480 84 HOH HOH A . PA 6 HOH 81 2481 85 HOH HOH A . PA 6 HOH 82 2482 86 HOH HOH A . PA 6 HOH 83 2483 87 HOH HOH A . PA 6 HOH 84 2484 88 HOH HOH A . PA 6 HOH 85 2485 89 HOH HOH A . PA 6 HOH 86 2486 90 HOH HOH A . PA 6 HOH 87 2487 91 HOH HOH A . PA 6 HOH 88 2488 92 HOH HOH A . PA 6 HOH 89 2489 94 HOH HOH A . PA 6 HOH 90 2490 95 HOH HOH A . PA 6 HOH 91 2491 96 HOH HOH A . PA 6 HOH 92 2492 97 HOH HOH A . PA 6 HOH 93 2493 98 HOH HOH A . PA 6 HOH 94 2494 99 HOH HOH A . PA 6 HOH 95 2495 100 HOH HOH A . PA 6 HOH 96 2496 101 HOH HOH A . PA 6 HOH 97 2497 102 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 263 ? CG ? A GLN 263 CG 2 1 Y 1 A GLN 263 ? CD ? A GLN 263 CD 3 1 Y 1 A GLN 263 ? OE1 ? A GLN 263 OE1 4 1 Y 1 A GLN 263 ? NE2 ? A GLN 263 NE2 5 1 Y 1 A GLU 264 ? CG ? A GLU 264 CG 6 1 Y 1 A GLU 264 ? CD ? A GLU 264 CD 7 1 Y 1 A GLU 264 ? OE1 ? A GLU 264 OE1 8 1 Y 1 A GLU 264 ? OE2 ? A GLU 264 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 4OI9 _cell.length_a 76.590 _cell.length_b 46.910 _cell.length_c 95.790 _cell.angle_alpha 90.00 _cell.angle_beta 104.34 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4OI9 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4OI9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.77 _exptl_crystal.density_percent_sol 67.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100 mM Tris-HCl 8.5, 10% PEG4000, pH 5.6, VAPOR DIFFUSION, temperature 294K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2005-07-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM16' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM16 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4OI9 _reflns.observed_criterion_sigma_I 44431 _reflns.observed_criterion_sigma_F 44431 _reflns.d_resolution_low 22.0 _reflns.d_resolution_high 2.5 _reflns.number_obs 23117 _reflns.number_all 23138 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.131 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4OI9 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20738 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.25 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.421 _refine.ls_d_res_high 2.500 _refine.ls_percent_reflns_obs 99.53 _refine.ls_R_factor_obs 0.2513 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2476 _refine.ls_R_factor_R_free 0.2634 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 11.74 _refine.ls_number_reflns_R_free 2325 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values TWIN_LSQ_F _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML . _refine.pdbx_overall_phase_error 33.49 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2892 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 328 _refine_hist.number_atoms_solvent 97 _refine_hist.number_atoms_total 3317 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 22.421 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.004 ? ? 3272 'X-RAY DIFFRACTION' ? f_angle_d 0.931 ? ? 4401 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 23.282 ? ? 1287 'X-RAY DIFFRACTION' ? f_chiral_restr 0.058 ? ? 522 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 559 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.5006 2.5437 2000 0.4279 89.00 0.4624 . . 242 . . . . 'X-RAY DIFFRACTION' . 2.5437 2.5898 2006 0.4224 90.00 0.4832 . . 235 . . . . 'X-RAY DIFFRACTION' . 2.5898 2.6395 1987 0.4231 89.00 0.4249 . . 234 . . . . 'X-RAY DIFFRACTION' . 2.6395 2.6932 1952 0.4108 89.00 0.4615 . . 232 . . . . 'X-RAY DIFFRACTION' . 2.6932 2.7517 2047 0.3834 91.00 0.3508 . . 205 . . . . 'X-RAY DIFFRACTION' . 2.7517 2.8155 1984 0.3711 89.00 0.4087 . . 249 . . . . 'X-RAY DIFFRACTION' . 2.8155 2.8857 2012 0.3681 90.00 0.4056 . . 225 . . . . 'X-RAY DIFFRACTION' . 2.8857 2.9634 1992 0.3556 90.00 0.4127 . . 217 . . . . 'X-RAY DIFFRACTION' . 2.9634 3.0503 1971 0.3308 89.00 0.3542 . . 224 . . . . 'X-RAY DIFFRACTION' . 3.0503 3.1484 2008 0.3153 90.00 0.3252 . . 222 . . . . 'X-RAY DIFFRACTION' . 3.1484 3.2604 2009 0.2818 90.00 0.3236 . . 218 . . . . 'X-RAY DIFFRACTION' . 3.2604 3.3903 1987 0.2815 90.00 0.2697 . . 223 . . . . 'X-RAY DIFFRACTION' . 3.3903 3.5438 2053 0.2581 91.00 0.2896 . . 209 . . . . 'X-RAY DIFFRACTION' . 3.5438 3.7294 1957 0.2296 90.00 0.2589 . . 222 . . . . 'X-RAY DIFFRACTION' . 3.7294 3.9613 2064 0.2119 91.00 0.2400 . . 201 . . . . 'X-RAY DIFFRACTION' . 3.9613 4.2642 2015 0.2121 90.00 0.2175 . . 230 . . . . 'X-RAY DIFFRACTION' . 4.2642 4.6880 1970 0.1765 89.00 0.1931 . . 240 . . . . 'X-RAY DIFFRACTION' . 4.6880 5.3542 2022 0.1726 91.00 0.1838 . . 193 . . . . 'X-RAY DIFFRACTION' . 5.3542 6.7005 2001 0.2061 90.00 0.2360 . . 226 . . . . 'X-RAY DIFFRACTION' . 6.7005 19.5835 1873 0.2067 84.00 0.1993 . . 229 . . . . # _database_PDB_matrix.entry_id 4OI9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4OI9 _struct.title 'Crystal Structure of ICAM-5 D1-D4 ectodomain fragment, Space Group P21' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OI9 _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'Cell adhesion, cell surface, neurons, immunoglobulin superfamily, intercellular adhesion molecules, ICAM-5, telencephalin' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 5 ? R N N 5 ? S N N 5 ? T N N 5 ? U N N 5 ? V N N 5 ? W N N 5 ? X N N 5 ? Y N N 5 ? Z N N 5 ? AA N N 5 ? BA N N 5 ? CA N N 5 ? DA N N 5 ? EA N N 5 ? FA N N 5 ? GA N N 5 ? HA N N 5 ? IA N N 5 ? JA N N 5 ? KA N N 5 ? LA N N 5 ? MA N N 5 ? NA N N 5 ? OA N N 5 ? PA N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ICAM5_HUMAN _struct_ref.pdbx_db_accession Q9UMF0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EPFWADLQPRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQAR GLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARRED HGANFSCRAELDLRPHGLGLFENSSAPRELRTFSLSPDAPRLAAPRLLEVGSERPVSCTLDGLFPASEARVYLALGDQNL SPDVTLEGDAFVATATATASAEQEGARQLVCNVTLGGENRETRENVTIYSFPAPLLTLSEPSVSEGQMVTVTCAAGAQAL VTLEGVPAAVPGQPAQLQLNATENDDRRSFFCDATLDVDGETLIKNRSAELRVLYAPR ; _struct_ref.pdbx_align_begin 32 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4OI9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 378 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UMF0 _struct_ref_seq.db_align_beg 32 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 409 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 378 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 118 ? ALA A 120 ? PRO A 118 ALA A 120 5 ? 3 HELX_P HELX_P2 2 ARG A 157 ? HIS A 161 ? ARG A 157 HIS A 161 5 ? 5 HELX_P HELX_P3 3 ARG A 174 ? GLY A 177 ? ARG A 174 GLY A 177 5 ? 4 HELX_P HELX_P4 4 PRO A 225 ? ALA A 229 ? PRO A 225 ALA A 229 5 ? 5 HELX_P HELX_P5 5 THR A 342 ? ASP A 346 ? THR A 342 ASP A 346 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 68 SG ? ? A CYS 24 A CYS 68 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf2 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 72 SG ? ? A CYS 28 A CYS 72 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf3 disulf ? ? A CYS 111 SG ? ? ? 1_555 A CYS 167 SG ? ? A CYS 111 A CYS 167 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf4 disulf ? ? A CYS 218 SG ? ? ? 1_555 A CYS 271 SG ? ? A CYS 218 A CYS 271 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf5 disulf ? ? A CYS 313 SG ? ? ? 1_555 A CYS 352 SG ? ? A CYS 313 A CYS 352 1_555 ? ? ? ? ? ? ? 2.003 ? ? covale1 covale one ? A ASN 23 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 23 B NAG 1 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale2 covale one ? A ASN 43 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 43 A NAG 2303 1_555 ? ? ? ? ? ? ? 1.433 ? N-Glycosylation covale3 covale one ? A ASN 106 ND2 ? ? ? 1_555 G NAG . C1 ? ? A ASN 106 A NAG 2304 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation covale4 covale one ? A ASN 164 ND2 ? ? ? 1_555 H NAG . C1 ? ? A ASN 164 A NAG 2305 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale5 covale one ? A ASN 183 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 183 C NAG 1 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale6 covale one ? A ASN 272 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 272 E NAG 1 1_555 ? ? ? ? ? ? ? 1.444 ? N-Glycosylation covale7 covale one ? A ASN 285 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 285 D NAG 1 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation covale8 covale one ? A ASN 340 ND2 ? ? ? 1_555 I NAG . C1 ? ? A ASN 340 A NAG 2312 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale9 covale one ? A ASN 366 ND2 ? ? ? 1_555 J NAG . C1 ? ? A ASN 366 A NAG 2315 1_555 ? ? ? ? ? ? ? 1.446 ? N-Glycosylation covale10 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale11 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale12 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.438 ? ? covale13 covale both ? D NAG . O4 ? ? ? 1_555 D BMA . C1 ? ? D NAG 2 D BMA 3 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale14 covale both ? D BMA . O3 ? ? ? 1_555 D MAN . C1 ? ? D BMA 3 D MAN 4 1_555 ? ? ? ? ? ? ? 1.438 ? ? covale15 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.448 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG B . ? ASN A 23 ? NAG B 1 ? 1_555 ASN A 23 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG C . ? ASN A 183 ? NAG C 1 ? 1_555 ASN A 183 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG D . ? ASN A 285 ? NAG D 1 ? 1_555 ASN A 285 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 NAG E . ? ASN A 272 ? NAG E 1 ? 1_555 ASN A 272 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 5 NAG F . ? ASN A 43 ? NAG A 2303 ? 1_555 ASN A 43 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 6 NAG G . ? ASN A 106 ? NAG A 2304 ? 1_555 ASN A 106 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 7 NAG H . ? ASN A 164 ? NAG A 2305 ? 1_555 ASN A 164 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 8 NAG I . ? ASN A 340 ? NAG A 2312 ? 1_555 ASN A 340 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 9 NAG J . ? ASN A 366 ? NAG A 2315 ? 1_555 ASN A 366 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 10 CYS A 24 ? CYS A 68 ? CYS A 24 ? 1_555 CYS A 68 ? 1_555 SG SG . . . None 'Disulfide bridge' 11 CYS A 28 ? CYS A 72 ? CYS A 28 ? 1_555 CYS A 72 ? 1_555 SG SG . . . None 'Disulfide bridge' 12 CYS A 111 ? CYS A 167 ? CYS A 111 ? 1_555 CYS A 167 ? 1_555 SG SG . . . None 'Disulfide bridge' 13 CYS A 218 ? CYS A 271 ? CYS A 218 ? 1_555 CYS A 271 ? 1_555 SG SG . . . None 'Disulfide bridge' 14 CYS A 313 ? CYS A 352 ? CYS A 313 ? 1_555 CYS A 352 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLN 8 A . ? GLN 8 A PRO 9 A ? PRO 9 A 1 -6.56 2 GLY 117 A . ? GLY 117 A PRO 118 A ? PRO 118 A 1 -2.69 3 PHE 224 A . ? PHE 224 A PRO 225 A ? PRO 225 A 1 -19.56 4 GLN 263 A . ? GLN 263 A GLU 264 A ? GLU 264 A 1 -5.49 5 ALA 329 A . ? ALA 329 A VAL 330 A ? VAL 330 A 1 0.05 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 3 ? D ? 3 ? E ? 3 ? F ? 4 ? G ? 4 ? H ? 5 ? I ? 3 ? J ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel H 4 5 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel J 1 2 ? parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel J 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 5 ? GLN A 8 ? ALA A 5 GLN A 8 A 2 GLY A 18 ? THR A 26 ? GLY A 18 THR A 26 A 3 TRP A 51 ? ILE A 59 ? TRP A 51 ILE A 59 A 4 ARG A 41 ? ARG A 47 ? ARG A 41 ARG A 47 B 1 VAL A 11 ? GLU A 15 ? VAL A 11 GLU A 15 B 2 LEU A 82 ? PHE A 86 ? LEU A 82 PHE A 86 B 3 GLU A 63 ? THR A 64 ? GLU A 63 THR A 64 C 1 PRO A 31 ? GLU A 37 ? PRO A 31 GLU A 37 C 2 VAL A 67 ? CYS A 72 ? VAL A 67 CYS A 72 C 3 ARG A 75 ? ARG A 80 ? ARG A 75 ARG A 80 D 1 GLU A 93 ? LEU A 94 ? GLU A 93 LEU A 94 D 2 ASN A 106 ? VAL A 113 ? ASN A 106 VAL A 113 D 3 ALA A 148 ? LEU A 155 ? ALA A 148 LEU A 155 E 1 GLN A 101 ? PRO A 102 ? GLN A 101 PRO A 102 E 2 THR A 192 ? LEU A 195 ? THR A 192 LEU A 195 E 3 LEU A 223 ? PHE A 224 ? LEU A 223 PHE A 224 F 1 GLN A 131 ? SER A 137 ? GLN A 131 SER A 137 F 2 LEU A 122 ? ARG A 128 ? LEU A 122 ARG A 128 F 3 PHE A 165 ? ASP A 172 ? PHE A 165 ASP A 172 F 4 LEU A 180 ? SER A 184 ? LEU A 180 SER A 184 G 1 ARG A 201 ? ALA A 203 ? ARG A 201 ALA A 203 G 2 ARG A 214 ? LEU A 220 ? ARG A 214 LEU A 220 G 3 ALA A 250 ? ALA A 257 ? ALA A 250 ALA A 257 G 4 ASP A 243 ? GLU A 247 ? ASP A 243 GLU A 247 H 1 LEU A 207 ? GLU A 209 ? LEU A 207 GLU A 209 H 2 GLU A 278 ? TYR A 289 ? GLU A 278 TYR A 289 H 3 GLY A 265 ? LEU A 275 ? GLY A 265 LEU A 275 H 4 ARG A 230 ? LEU A 235 ? ARG A 230 LEU A 235 H 5 ASN A 239 ? LEU A 240 ? ASN A 239 LEU A 240 I 1 LEU A 295 ? LEU A 298 ? LEU A 295 LEU A 298 I 2 MET A 308 ? ALA A 314 ? MET A 308 ALA A 314 I 3 ALA A 335 ? ASN A 340 ? ALA A 335 ASN A 340 J 1 SER A 302 ? SER A 304 ? SER A 302 SER A 304 J 2 GLU A 361 ? LEU A 374 ? GLU A 361 LEU A 374 J 3 ARG A 348 ? VAL A 358 ? ARG A 348 VAL A 358 J 4 LEU A 320 ? LEU A 323 ? LEU A 320 LEU A 323 J 5 VAL A 326 ? PRO A 327 ? VAL A 326 PRO A 327 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 8 ? N GLN A 8 O ASN A 23 ? O ASN A 23 A 2 3 N LEU A 22 ? N LEU A 22 O ARG A 54 ? O ARG A 54 A 3 4 O ALA A 53 ? O ALA A 53 N GLN A 46 ? N GLN A 46 B 1 2 N ALA A 12 ? N ALA A 12 O ARG A 84 ? O ARG A 84 B 2 3 O ILE A 83 ? O ILE A 83 N THR A 64 ? N THR A 64 C 1 2 N GLU A 32 ? N GLU A 32 O ARG A 71 ? O ARG A 71 C 2 3 N PHE A 70 ? N PHE A 70 O LEU A 77 ? O LEU A 77 D 1 2 N GLU A 93 ? N GLU A 93 O ARG A 112 ? O ARG A 112 D 2 3 N CYS A 111 ? N CYS A 111 O LEU A 150 ? O LEU A 150 E 1 2 N GLN A 101 ? N GLN A 101 O PHE A 193 ? O PHE A 193 E 2 3 N SER A 194 ? N SER A 194 O PHE A 224 ? O PHE A 224 F 1 2 O ARG A 136 ? O ARG A 136 N LEU A 124 ? N LEU A 124 F 2 3 N LEU A 127 ? N LEU A 127 O SER A 166 ? O SER A 166 F 3 4 N LEU A 171 ? N LEU A 171 O PHE A 181 ? O PHE A 181 G 1 2 N ALA A 203 ? N ALA A 203 O SER A 217 ? O SER A 217 G 2 3 N CYS A 218 ? N CYS A 218 O ALA A 253 ? O ALA A 253 G 3 4 O ALA A 250 ? O ALA A 250 N GLU A 247 ? N GLU A 247 H 1 2 N LEU A 208 ? N LEU A 208 O THR A 287 ? O THR A 287 H 2 3 O ILE A 288 ? O ILE A 288 N GLY A 265 ? N GLY A 265 H 3 4 O ASN A 272 ? O ASN A 272 N TYR A 232 ? N TYR A 232 H 4 5 N LEU A 233 ? N LEU A 233 O LEU A 240 ? O LEU A 240 I 1 2 N LEU A 295 ? N LEU A 295 O ALA A 314 ? O ALA A 314 I 2 3 N VAL A 309 ? N VAL A 309 O LEU A 339 ? O LEU A 339 J 1 2 N VAL A 303 ? N VAL A 303 O ARG A 372 ? O ARG A 372 J 2 3 O LEU A 363 ? O LEU A 363 N LEU A 356 ? N LEU A 356 J 3 4 O ASP A 353 ? O ASP A 353 N THR A 322 ? N THR A 322 J 4 5 N LEU A 323 ? N LEU A 323 O VAL A 326 ? O VAL A 326 # _pdbx_entry_details.entry_id 4OI9 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CB A CYS 24 ? ? SG A CYS 68 ? ? 1.65 2 1 SG A CYS 28 ? ? CB A CYS 72 ? ? 1.69 3 1 CB A CYS 28 ? ? SG A CYS 72 ? ? 1.71 4 1 CB A CYS 313 ? ? SG A CYS 352 ? ? 1.73 5 1 ND2 A ASN 106 ? ? C2 A NAG 2304 ? ? 1.75 6 1 SG A CYS 313 ? ? CB A CYS 352 ? ? 1.93 7 1 ND2 A ASN 183 ? ? C2 C NAG 1 ? ? 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 43 ? ? -114.81 -74.22 2 1 PRO A 89 ? ? -69.91 68.68 3 1 SER A 241 ? ? -118.67 77.03 4 1 ALA A 261 ? ? 86.34 -2.88 5 1 GLN A 263 ? ? 58.93 -140.59 6 1 GLN A 318 ? ? -95.22 -65.62 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 43 A ASN 43 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 106 A ASN 106 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 285 A ASN 285 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 164 A ASN 164 ? ASN 'GLYCOSYLATION SITE' 5 A ASN 340 A ASN 340 ? ASN 'GLYCOSYLATION SITE' 6 A ASN 23 A ASN 23 ? ASN 'GLYCOSYLATION SITE' 7 A ASN 183 A ASN 183 ? ASN 'GLYCOSYLATION SITE' 8 A ASN 272 A ASN 272 ? ASN 'GLYCOSYLATION SITE' 9 A ASN 366 A ASN 366 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 2.2423 -3.2420 91.0249 0.3751 0.5895 0.4639 0.0584 0.0979 0.0804 9.1897 3.1669 4.5353 1.9183 -3.3509 -1.3209 -0.0851 0.3028 -0.2147 0.1793 0.0553 0.5006 0.1179 -0.1766 -1.1629 'X-RAY DIFFRACTION' 2 ? refined 24.5467 15.4228 62.9451 0.4982 0.4809 0.4168 0.0221 0.0448 0.1493 7.3825 2.5376 9.6057 2.1461 -5.4778 -3.4281 -0.1664 -0.0203 0.1532 0.6666 0.4893 -0.2088 -0.2520 -0.4237 0.0133 'X-RAY DIFFRACTION' 3 ? refined 56.0088 20.0692 31.5361 0.7258 1.6318 0.6804 -0.2637 0.0849 0.4143 2.5944 3.2679 2.6951 0.2706 -0.6029 0.0719 -0.2519 0.4877 -0.1609 0.6442 0.0532 0.0976 0.1491 0.2280 -0.0172 'X-RAY DIFFRACTION' 4 ? refined 88.9849 22.8915 5.2396 0.6360 1.0766 0.5662 -0.3033 0.1065 -0.0759 2.2487 2.5307 0.5323 0.5489 -0.3334 -0.5125 -0.1796 0.1540 0.0339 0.8483 -0.6604 0.1879 -0.2460 0.4571 -1.0938 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 85 '( CHAIN A AND RESID 1:85 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 86 A 194 '( CHAIN A AND RESID 86:194 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 195 A 289 '( CHAIN A AND RESID 195:289 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 290 A 378 '( CHAIN A AND RESID 290:378 )' ? ? ? ? ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 EDO C1 C N N 112 EDO O1 O N N 113 EDO C2 C N N 114 EDO O2 O N N 115 EDO H11 H N N 116 EDO H12 H N N 117 EDO HO1 H N N 118 EDO H21 H N N 119 EDO H22 H N N 120 EDO HO2 H N N 121 GLN N N N N 122 GLN CA C N S 123 GLN C C N N 124 GLN O O N N 125 GLN CB C N N 126 GLN CG C N N 127 GLN CD C N N 128 GLN OE1 O N N 129 GLN NE2 N N N 130 GLN OXT O N N 131 GLN H H N N 132 GLN H2 H N N 133 GLN HA H N N 134 GLN HB2 H N N 135 GLN HB3 H N N 136 GLN HG2 H N N 137 GLN HG3 H N N 138 GLN HE21 H N N 139 GLN HE22 H N N 140 GLN HXT H N N 141 GLU N N N N 142 GLU CA C N S 143 GLU C C N N 144 GLU O O N N 145 GLU CB C N N 146 GLU CG C N N 147 GLU CD C N N 148 GLU OE1 O N N 149 GLU OE2 O N N 150 GLU OXT O N N 151 GLU H H N N 152 GLU H2 H N N 153 GLU HA H N N 154 GLU HB2 H N N 155 GLU HB3 H N N 156 GLU HG2 H N N 157 GLU HG3 H N N 158 GLU HE2 H N N 159 GLU HXT H N N 160 GLY N N N N 161 GLY CA C N N 162 GLY C C N N 163 GLY O O N N 164 GLY OXT O N N 165 GLY H H N N 166 GLY H2 H N N 167 GLY HA2 H N N 168 GLY HA3 H N N 169 GLY HXT H N N 170 HIS N N N N 171 HIS CA C N S 172 HIS C C N N 173 HIS O O N N 174 HIS CB C N N 175 HIS CG C Y N 176 HIS ND1 N Y N 177 HIS CD2 C Y N 178 HIS CE1 C Y N 179 HIS NE2 N Y N 180 HIS OXT O N N 181 HIS H H N N 182 HIS H2 H N N 183 HIS HA H N N 184 HIS HB2 H N N 185 HIS HB3 H N N 186 HIS HD1 H N N 187 HIS HD2 H N N 188 HIS HE1 H N N 189 HIS HE2 H N N 190 HIS HXT H N N 191 HOH O O N N 192 HOH H1 H N N 193 HOH H2 H N N 194 ILE N N N N 195 ILE CA C N S 196 ILE C C N N 197 ILE O O N N 198 ILE CB C N S 199 ILE CG1 C N N 200 ILE CG2 C N N 201 ILE CD1 C N N 202 ILE OXT O N N 203 ILE H H N N 204 ILE H2 H N N 205 ILE HA H N N 206 ILE HB H N N 207 ILE HG12 H N N 208 ILE HG13 H N N 209 ILE HG21 H N N 210 ILE HG22 H N N 211 ILE HG23 H N N 212 ILE HD11 H N N 213 ILE HD12 H N N 214 ILE HD13 H N N 215 ILE HXT H N N 216 LEU N N N N 217 LEU CA C N S 218 LEU C C N N 219 LEU O O N N 220 LEU CB C N N 221 LEU CG C N N 222 LEU CD1 C N N 223 LEU CD2 C N N 224 LEU OXT O N N 225 LEU H H N N 226 LEU H2 H N N 227 LEU HA H N N 228 LEU HB2 H N N 229 LEU HB3 H N N 230 LEU HG H N N 231 LEU HD11 H N N 232 LEU HD12 H N N 233 LEU HD13 H N N 234 LEU HD21 H N N 235 LEU HD22 H N N 236 LEU HD23 H N N 237 LEU HXT H N N 238 LYS N N N N 239 LYS CA C N S 240 LYS C C N N 241 LYS O O N N 242 LYS CB C N N 243 LYS CG C N N 244 LYS CD C N N 245 LYS CE C N N 246 LYS NZ N N N 247 LYS OXT O N N 248 LYS H H N N 249 LYS H2 H N N 250 LYS HA H N N 251 LYS HB2 H N N 252 LYS HB3 H N N 253 LYS HG2 H N N 254 LYS HG3 H N N 255 LYS HD2 H N N 256 LYS HD3 H N N 257 LYS HE2 H N N 258 LYS HE3 H N N 259 LYS HZ1 H N N 260 LYS HZ2 H N N 261 LYS HZ3 H N N 262 LYS HXT H N N 263 MAN C1 C N S 264 MAN C2 C N S 265 MAN C3 C N S 266 MAN C4 C N S 267 MAN C5 C N R 268 MAN C6 C N N 269 MAN O1 O N N 270 MAN O2 O N N 271 MAN O3 O N N 272 MAN O4 O N N 273 MAN O5 O N N 274 MAN O6 O N N 275 MAN H1 H N N 276 MAN H2 H N N 277 MAN H3 H N N 278 MAN H4 H N N 279 MAN H5 H N N 280 MAN H61 H N N 281 MAN H62 H N N 282 MAN HO1 H N N 283 MAN HO2 H N N 284 MAN HO3 H N N 285 MAN HO4 H N N 286 MAN HO6 H N N 287 MET N N N N 288 MET CA C N S 289 MET C C N N 290 MET O O N N 291 MET CB C N N 292 MET CG C N N 293 MET SD S N N 294 MET CE C N N 295 MET OXT O N N 296 MET H H N N 297 MET H2 H N N 298 MET HA H N N 299 MET HB2 H N N 300 MET HB3 H N N 301 MET HG2 H N N 302 MET HG3 H N N 303 MET HE1 H N N 304 MET HE2 H N N 305 MET HE3 H N N 306 MET HXT H N N 307 NAG C1 C N R 308 NAG C2 C N R 309 NAG C3 C N R 310 NAG C4 C N S 311 NAG C5 C N R 312 NAG C6 C N N 313 NAG C7 C N N 314 NAG C8 C N N 315 NAG N2 N N N 316 NAG O1 O N N 317 NAG O3 O N N 318 NAG O4 O N N 319 NAG O5 O N N 320 NAG O6 O N N 321 NAG O7 O N N 322 NAG H1 H N N 323 NAG H2 H N N 324 NAG H3 H N N 325 NAG H4 H N N 326 NAG H5 H N N 327 NAG H61 H N N 328 NAG H62 H N N 329 NAG H81 H N N 330 NAG H82 H N N 331 NAG H83 H N N 332 NAG HN2 H N N 333 NAG HO1 H N N 334 NAG HO3 H N N 335 NAG HO4 H N N 336 NAG HO6 H N N 337 PHE N N N N 338 PHE CA C N S 339 PHE C C N N 340 PHE O O N N 341 PHE CB C N N 342 PHE CG C Y N 343 PHE CD1 C Y N 344 PHE CD2 C Y N 345 PHE CE1 C Y N 346 PHE CE2 C Y N 347 PHE CZ C Y N 348 PHE OXT O N N 349 PHE H H N N 350 PHE H2 H N N 351 PHE HA H N N 352 PHE HB2 H N N 353 PHE HB3 H N N 354 PHE HD1 H N N 355 PHE HD2 H N N 356 PHE HE1 H N N 357 PHE HE2 H N N 358 PHE HZ H N N 359 PHE HXT H N N 360 PRO N N N N 361 PRO CA C N S 362 PRO C C N N 363 PRO O O N N 364 PRO CB C N N 365 PRO CG C N N 366 PRO CD C N N 367 PRO OXT O N N 368 PRO H H N N 369 PRO HA H N N 370 PRO HB2 H N N 371 PRO HB3 H N N 372 PRO HG2 H N N 373 PRO HG3 H N N 374 PRO HD2 H N N 375 PRO HD3 H N N 376 PRO HXT H N N 377 SER N N N N 378 SER CA C N S 379 SER C C N N 380 SER O O N N 381 SER CB C N N 382 SER OG O N N 383 SER OXT O N N 384 SER H H N N 385 SER H2 H N N 386 SER HA H N N 387 SER HB2 H N N 388 SER HB3 H N N 389 SER HG H N N 390 SER HXT H N N 391 THR N N N N 392 THR CA C N S 393 THR C C N N 394 THR O O N N 395 THR CB C N R 396 THR OG1 O N N 397 THR CG2 C N N 398 THR OXT O N N 399 THR H H N N 400 THR H2 H N N 401 THR HA H N N 402 THR HB H N N 403 THR HG1 H N N 404 THR HG21 H N N 405 THR HG22 H N N 406 THR HG23 H N N 407 THR HXT H N N 408 TRP N N N N 409 TRP CA C N S 410 TRP C C N N 411 TRP O O N N 412 TRP CB C N N 413 TRP CG C Y N 414 TRP CD1 C Y N 415 TRP CD2 C Y N 416 TRP NE1 N Y N 417 TRP CE2 C Y N 418 TRP CE3 C Y N 419 TRP CZ2 C Y N 420 TRP CZ3 C Y N 421 TRP CH2 C Y N 422 TRP OXT O N N 423 TRP H H N N 424 TRP H2 H N N 425 TRP HA H N N 426 TRP HB2 H N N 427 TRP HB3 H N N 428 TRP HD1 H N N 429 TRP HE1 H N N 430 TRP HE3 H N N 431 TRP HZ2 H N N 432 TRP HZ3 H N N 433 TRP HH2 H N N 434 TRP HXT H N N 435 TYR N N N N 436 TYR CA C N S 437 TYR C C N N 438 TYR O O N N 439 TYR CB C N N 440 TYR CG C Y N 441 TYR CD1 C Y N 442 TYR CD2 C Y N 443 TYR CE1 C Y N 444 TYR CE2 C Y N 445 TYR CZ C Y N 446 TYR OH O N N 447 TYR OXT O N N 448 TYR H H N N 449 TYR H2 H N N 450 TYR HA H N N 451 TYR HB2 H N N 452 TYR HB3 H N N 453 TYR HD1 H N N 454 TYR HD2 H N N 455 TYR HE1 H N N 456 TYR HE2 H N N 457 TYR HH H N N 458 TYR HXT H N N 459 VAL N N N N 460 VAL CA C N S 461 VAL C C N N 462 VAL O O N N 463 VAL CB C N N 464 VAL CG1 C N N 465 VAL CG2 C N N 466 VAL OXT O N N 467 VAL H H N N 468 VAL H2 H N N 469 VAL HA H N N 470 VAL HB H N N 471 VAL HG11 H N N 472 VAL HG12 H N N 473 VAL HG13 H N N 474 VAL HG21 H N N 475 VAL HG22 H N N 476 VAL HG23 H N N 477 VAL HXT H N N 478 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 EDO C1 O1 sing N N 107 EDO C1 C2 sing N N 108 EDO C1 H11 sing N N 109 EDO C1 H12 sing N N 110 EDO O1 HO1 sing N N 111 EDO C2 O2 sing N N 112 EDO C2 H21 sing N N 113 EDO C2 H22 sing N N 114 EDO O2 HO2 sing N N 115 GLN N CA sing N N 116 GLN N H sing N N 117 GLN N H2 sing N N 118 GLN CA C sing N N 119 GLN CA CB sing N N 120 GLN CA HA sing N N 121 GLN C O doub N N 122 GLN C OXT sing N N 123 GLN CB CG sing N N 124 GLN CB HB2 sing N N 125 GLN CB HB3 sing N N 126 GLN CG CD sing N N 127 GLN CG HG2 sing N N 128 GLN CG HG3 sing N N 129 GLN CD OE1 doub N N 130 GLN CD NE2 sing N N 131 GLN NE2 HE21 sing N N 132 GLN NE2 HE22 sing N N 133 GLN OXT HXT sing N N 134 GLU N CA sing N N 135 GLU N H sing N N 136 GLU N H2 sing N N 137 GLU CA C sing N N 138 GLU CA CB sing N N 139 GLU CA HA sing N N 140 GLU C O doub N N 141 GLU C OXT sing N N 142 GLU CB CG sing N N 143 GLU CB HB2 sing N N 144 GLU CB HB3 sing N N 145 GLU CG CD sing N N 146 GLU CG HG2 sing N N 147 GLU CG HG3 sing N N 148 GLU CD OE1 doub N N 149 GLU CD OE2 sing N N 150 GLU OE2 HE2 sing N N 151 GLU OXT HXT sing N N 152 GLY N CA sing N N 153 GLY N H sing N N 154 GLY N H2 sing N N 155 GLY CA C sing N N 156 GLY CA HA2 sing N N 157 GLY CA HA3 sing N N 158 GLY C O doub N N 159 GLY C OXT sing N N 160 GLY OXT HXT sing N N 161 HIS N CA sing N N 162 HIS N H sing N N 163 HIS N H2 sing N N 164 HIS CA C sing N N 165 HIS CA CB sing N N 166 HIS CA HA sing N N 167 HIS C O doub N N 168 HIS C OXT sing N N 169 HIS CB CG sing N N 170 HIS CB HB2 sing N N 171 HIS CB HB3 sing N N 172 HIS CG ND1 sing Y N 173 HIS CG CD2 doub Y N 174 HIS ND1 CE1 doub Y N 175 HIS ND1 HD1 sing N N 176 HIS CD2 NE2 sing Y N 177 HIS CD2 HD2 sing N N 178 HIS CE1 NE2 sing Y N 179 HIS CE1 HE1 sing N N 180 HIS NE2 HE2 sing N N 181 HIS OXT HXT sing N N 182 HOH O H1 sing N N 183 HOH O H2 sing N N 184 ILE N CA sing N N 185 ILE N H sing N N 186 ILE N H2 sing N N 187 ILE CA C sing N N 188 ILE CA CB sing N N 189 ILE CA HA sing N N 190 ILE C O doub N N 191 ILE C OXT sing N N 192 ILE CB CG1 sing N N 193 ILE CB CG2 sing N N 194 ILE CB HB sing N N 195 ILE CG1 CD1 sing N N 196 ILE CG1 HG12 sing N N 197 ILE CG1 HG13 sing N N 198 ILE CG2 HG21 sing N N 199 ILE CG2 HG22 sing N N 200 ILE CG2 HG23 sing N N 201 ILE CD1 HD11 sing N N 202 ILE CD1 HD12 sing N N 203 ILE CD1 HD13 sing N N 204 ILE OXT HXT sing N N 205 LEU N CA sing N N 206 LEU N H sing N N 207 LEU N H2 sing N N 208 LEU CA C sing N N 209 LEU CA CB sing N N 210 LEU CA HA sing N N 211 LEU C O doub N N 212 LEU C OXT sing N N 213 LEU CB CG sing N N 214 LEU CB HB2 sing N N 215 LEU CB HB3 sing N N 216 LEU CG CD1 sing N N 217 LEU CG CD2 sing N N 218 LEU CG HG sing N N 219 LEU CD1 HD11 sing N N 220 LEU CD1 HD12 sing N N 221 LEU CD1 HD13 sing N N 222 LEU CD2 HD21 sing N N 223 LEU CD2 HD22 sing N N 224 LEU CD2 HD23 sing N N 225 LEU OXT HXT sing N N 226 LYS N CA sing N N 227 LYS N H sing N N 228 LYS N H2 sing N N 229 LYS CA C sing N N 230 LYS CA CB sing N N 231 LYS CA HA sing N N 232 LYS C O doub N N 233 LYS C OXT sing N N 234 LYS CB CG sing N N 235 LYS CB HB2 sing N N 236 LYS CB HB3 sing N N 237 LYS CG CD sing N N 238 LYS CG HG2 sing N N 239 LYS CG HG3 sing N N 240 LYS CD CE sing N N 241 LYS CD HD2 sing N N 242 LYS CD HD3 sing N N 243 LYS CE NZ sing N N 244 LYS CE HE2 sing N N 245 LYS CE HE3 sing N N 246 LYS NZ HZ1 sing N N 247 LYS NZ HZ2 sing N N 248 LYS NZ HZ3 sing N N 249 LYS OXT HXT sing N N 250 MAN C1 C2 sing N N 251 MAN C1 O1 sing N N 252 MAN C1 O5 sing N N 253 MAN C1 H1 sing N N 254 MAN C2 C3 sing N N 255 MAN C2 O2 sing N N 256 MAN C2 H2 sing N N 257 MAN C3 C4 sing N N 258 MAN C3 O3 sing N N 259 MAN C3 H3 sing N N 260 MAN C4 C5 sing N N 261 MAN C4 O4 sing N N 262 MAN C4 H4 sing N N 263 MAN C5 C6 sing N N 264 MAN C5 O5 sing N N 265 MAN C5 H5 sing N N 266 MAN C6 O6 sing N N 267 MAN C6 H61 sing N N 268 MAN C6 H62 sing N N 269 MAN O1 HO1 sing N N 270 MAN O2 HO2 sing N N 271 MAN O3 HO3 sing N N 272 MAN O4 HO4 sing N N 273 MAN O6 HO6 sing N N 274 MET N CA sing N N 275 MET N H sing N N 276 MET N H2 sing N N 277 MET CA C sing N N 278 MET CA CB sing N N 279 MET CA HA sing N N 280 MET C O doub N N 281 MET C OXT sing N N 282 MET CB CG sing N N 283 MET CB HB2 sing N N 284 MET CB HB3 sing N N 285 MET CG SD sing N N 286 MET CG HG2 sing N N 287 MET CG HG3 sing N N 288 MET SD CE sing N N 289 MET CE HE1 sing N N 290 MET CE HE2 sing N N 291 MET CE HE3 sing N N 292 MET OXT HXT sing N N 293 NAG C1 C2 sing N N 294 NAG C1 O1 sing N N 295 NAG C1 O5 sing N N 296 NAG C1 H1 sing N N 297 NAG C2 C3 sing N N 298 NAG C2 N2 sing N N 299 NAG C2 H2 sing N N 300 NAG C3 C4 sing N N 301 NAG C3 O3 sing N N 302 NAG C3 H3 sing N N 303 NAG C4 C5 sing N N 304 NAG C4 O4 sing N N 305 NAG C4 H4 sing N N 306 NAG C5 C6 sing N N 307 NAG C5 O5 sing N N 308 NAG C5 H5 sing N N 309 NAG C6 O6 sing N N 310 NAG C6 H61 sing N N 311 NAG C6 H62 sing N N 312 NAG C7 C8 sing N N 313 NAG C7 N2 sing N N 314 NAG C7 O7 doub N N 315 NAG C8 H81 sing N N 316 NAG C8 H82 sing N N 317 NAG C8 H83 sing N N 318 NAG N2 HN2 sing N N 319 NAG O1 HO1 sing N N 320 NAG O3 HO3 sing N N 321 NAG O4 HO4 sing N N 322 NAG O6 HO6 sing N N 323 PHE N CA sing N N 324 PHE N H sing N N 325 PHE N H2 sing N N 326 PHE CA C sing N N 327 PHE CA CB sing N N 328 PHE CA HA sing N N 329 PHE C O doub N N 330 PHE C OXT sing N N 331 PHE CB CG sing N N 332 PHE CB HB2 sing N N 333 PHE CB HB3 sing N N 334 PHE CG CD1 doub Y N 335 PHE CG CD2 sing Y N 336 PHE CD1 CE1 sing Y N 337 PHE CD1 HD1 sing N N 338 PHE CD2 CE2 doub Y N 339 PHE CD2 HD2 sing N N 340 PHE CE1 CZ doub Y N 341 PHE CE1 HE1 sing N N 342 PHE CE2 CZ sing Y N 343 PHE CE2 HE2 sing N N 344 PHE CZ HZ sing N N 345 PHE OXT HXT sing N N 346 PRO N CA sing N N 347 PRO N CD sing N N 348 PRO N H sing N N 349 PRO CA C sing N N 350 PRO CA CB sing N N 351 PRO CA HA sing N N 352 PRO C O doub N N 353 PRO C OXT sing N N 354 PRO CB CG sing N N 355 PRO CB HB2 sing N N 356 PRO CB HB3 sing N N 357 PRO CG CD sing N N 358 PRO CG HG2 sing N N 359 PRO CG HG3 sing N N 360 PRO CD HD2 sing N N 361 PRO CD HD3 sing N N 362 PRO OXT HXT sing N N 363 SER N CA sing N N 364 SER N H sing N N 365 SER N H2 sing N N 366 SER CA C sing N N 367 SER CA CB sing N N 368 SER CA HA sing N N 369 SER C O doub N N 370 SER C OXT sing N N 371 SER CB OG sing N N 372 SER CB HB2 sing N N 373 SER CB HB3 sing N N 374 SER OG HG sing N N 375 SER OXT HXT sing N N 376 THR N CA sing N N 377 THR N H sing N N 378 THR N H2 sing N N 379 THR CA C sing N N 380 THR CA CB sing N N 381 THR CA HA sing N N 382 THR C O doub N N 383 THR C OXT sing N N 384 THR CB OG1 sing N N 385 THR CB CG2 sing N N 386 THR CB HB sing N N 387 THR OG1 HG1 sing N N 388 THR CG2 HG21 sing N N 389 THR CG2 HG22 sing N N 390 THR CG2 HG23 sing N N 391 THR OXT HXT sing N N 392 TRP N CA sing N N 393 TRP N H sing N N 394 TRP N H2 sing N N 395 TRP CA C sing N N 396 TRP CA CB sing N N 397 TRP CA HA sing N N 398 TRP C O doub N N 399 TRP C OXT sing N N 400 TRP CB CG sing N N 401 TRP CB HB2 sing N N 402 TRP CB HB3 sing N N 403 TRP CG CD1 doub Y N 404 TRP CG CD2 sing Y N 405 TRP CD1 NE1 sing Y N 406 TRP CD1 HD1 sing N N 407 TRP CD2 CE2 doub Y N 408 TRP CD2 CE3 sing Y N 409 TRP NE1 CE2 sing Y N 410 TRP NE1 HE1 sing N N 411 TRP CE2 CZ2 sing Y N 412 TRP CE3 CZ3 doub Y N 413 TRP CE3 HE3 sing N N 414 TRP CZ2 CH2 doub Y N 415 TRP CZ2 HZ2 sing N N 416 TRP CZ3 CH2 sing Y N 417 TRP CZ3 HZ3 sing N N 418 TRP CH2 HH2 sing N N 419 TRP OXT HXT sing N N 420 TYR N CA sing N N 421 TYR N H sing N N 422 TYR N H2 sing N N 423 TYR CA C sing N N 424 TYR CA CB sing N N 425 TYR CA HA sing N N 426 TYR C O doub N N 427 TYR C OXT sing N N 428 TYR CB CG sing N N 429 TYR CB HB2 sing N N 430 TYR CB HB3 sing N N 431 TYR CG CD1 doub Y N 432 TYR CG CD2 sing Y N 433 TYR CD1 CE1 sing Y N 434 TYR CD1 HD1 sing N N 435 TYR CD2 CE2 doub Y N 436 TYR CD2 HD2 sing N N 437 TYR CE1 CZ doub Y N 438 TYR CE1 HE1 sing N N 439 TYR CE2 CZ sing Y N 440 TYR CE2 HE2 sing N N 441 TYR CZ OH sing N N 442 TYR OH HH sing N N 443 TYR OXT HXT sing N N 444 VAL N CA sing N N 445 VAL N H sing N N 446 VAL N H2 sing N N 447 VAL CA C sing N N 448 VAL CA CB sing N N 449 VAL CA HA sing N N 450 VAL C O doub N N 451 VAL C OXT sing N N 452 VAL CB CG1 sing N N 453 VAL CB CG2 sing N N 454 VAL CB HB sing N N 455 VAL CG1 HG11 sing N N 456 VAL CG1 HG12 sing N N 457 VAL CG1 HG13 sing N N 458 VAL CG2 HG21 sing N N 459 VAL CG2 HG22 sing N N 460 VAL CG2 HG23 sing N N 461 VAL OXT HXT sing N N 462 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n # _pdbx_reflns_twin.domain_id 1 _pdbx_reflns_twin.crystal_id 1 _pdbx_reflns_twin.diffrn_id 1 _pdbx_reflns_twin.type ? _pdbx_reflns_twin.operator h,-k,-l _pdbx_reflns_twin.fraction 0.030 # _atom_sites.entry_id 4OI9 _atom_sites.fract_transf_matrix[1][1] 0.013057 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003338 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021317 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010775 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_