HEADER TRANSPORT PROTEIN/RNA BINDING PROTEIN 30-JAN-14 4OO6 TITLE CRYSTAL STRUCTURE OF HUMAN KAP-BETA2 BOUND TO THE NLS OF HCC1 (HEPATO TITLE 2 CELLULAR CARCINOMA PROTEIN 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSPORTIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 9-331 AND 375-898; COMPND 5 SYNONYM: IMPORTIN BETA-2, KARYOPHERIN BETA-2, M9 REGION INTERACTION COMPND 6 PROTEIN, MIP; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RNA-BINDING PROTEIN 39; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 73-99; COMPND 12 SYNONYM: HEPATOCELLULAR CARCINOMA PROTEIN 1, RNA-BINDING MOTIF COMPND 13 PROTEIN 39, RNA-BINDING REGION-CONTAINING PROTEIN 2, SPLICING FACTOR COMPND 14 HCC1; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KPNB2, MIP1, TNPO1, TRN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIL CODONPLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: HCC1, RBM39, RNPC2; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIL CODONPLUS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PGEX KEYWDS KARYOPHERIN, TRNAPORTIN, IMPORTIN, HEAT REPEATS, NUCLEAR IMPORT, KEYWDS 2 PROTEIN TRANSPORT, NLS, NUCLEAR LOCALIZATION SIGNAL, RNA-BINDING KEYWDS 3 PROTEIN, HCC1, NUCLEOCYTOPLASMIC TRANSPORT: A TARGET FOR CELLULAR KEYWDS 4 CONTROL (NPCXSTALS), NEW YORK STRUCTURAL GENOMICS RESEARCH KEYWDS 5 CONSORTIUM (NYSGRC), PSI-BIOLOGY, TRANSPORT PROTEIN-RNA BINDING KEYWDS 6 PROTEIN COMPLEX, NPCXSTALS EXPDTA X-RAY DIFFRACTION AUTHOR P.SAMPATHKUMAR,A.BROWER,M.SONIAT,J.BONANNO,B.HILLERICH,R.D.SEIDEL, AUTHOR 2 M.P.ROUT,Y.M.CHOOK,S.C.ALMO,NEW YORK STRUCTURAL GENOMICS RESEARCH AUTHOR 3 CONSORTIUM (NYSGRC),NUCLEOCYTOPLASMIC TRANSPORT: A TARGET FOR AUTHOR 4 CELLULAR CONTROL (NPCXSTALS) REVDAT 3 20-SEP-23 4OO6 1 SEQADV REVDAT 2 26-JUL-17 4OO6 1 SOURCE REVDAT 1 12-FEB-14 4OO6 0 JRNL AUTH P.SAMPATHKUMAR,A.BROWER,M.SONIAT,J.BONANNO,B.HILLERICH, JRNL AUTH 2 R.D.SEIDEL,M.P.ROUT,Y.M.CHOOK,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF HUMAN KAP-BETA2 BOUND TO THE NLS OF JRNL TITL 2 HCC1 (HEPATO CELLULAR CARCINOMA PROTEIN 1) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 39470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1977 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2718 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.3500 REMARK 3 BIN FREE R VALUE SET COUNT : 147 REMARK 3 BIN FREE R VALUE : 0.3840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6735 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.24000 REMARK 3 B22 (A**2) : 3.52000 REMARK 3 B33 (A**2) : 0.72000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.416 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.278 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.246 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.613 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6880 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6699 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9343 ; 1.440 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15440 ; 0.825 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 841 ; 6.008 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 310 ;42.117 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1234 ;16.998 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;19.389 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1069 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7698 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1512 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3373 ; 4.262 ; 6.364 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3372 ; 4.261 ; 6.364 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4211 ; 6.521 ; 9.545 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4OO6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084739. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0750 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39520 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 1.29500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4FDD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: "PROTEIN (20 MM HEPES, PH 7.3, 110 MM REMARK 280 POTASSIUM ACETATE, 2MM MAGNESIUM ACET ATE, 20% GLYCEROL, 2MM DTT) REMARK 280 ; RESERVOIR (0.2 M SODIUMCHLORIDE, 0.8M SODIUMCITRATE, 0.1M REMARK 280 BISTRIS PH 6.25 ); CRYO (2.5 M SODIUMMALONATE)">, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 63.29200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 81.07600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 63.29200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 81.07600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL HETREO-DIMER FORMED BY KAP-BETA2 (CHAIN A) REMARK 300 AND HCC1-NLS (CHAIN B) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 TYR A 3 REMARK 465 GLU A 4 REMARK 465 GLY A 356 REMARK 465 ASP A 357 REMARK 465 VAL A 358 REMARK 465 GLU A 359 REMARK 465 GLY A 360 REMARK 465 GLY A 361 REMARK 465 SER A 362 REMARK 465 GLY A 363 REMARK 465 GLY A 364 REMARK 465 SER A 365 REMARK 465 GLY A 366 REMARK 465 ASP A 367 REMARK 465 ASP A 368 REMARK 465 THR A 369 REMARK 465 ARG B 73 REMARK 465 SER B 74 REMARK 465 ARG B 75 REMARK 465 SER B 76 REMARK 465 LYS B 77 REMARK 465 GLU B 78 REMARK 465 ARG B 79 REMARK 465 ARG B 80 REMARK 465 ARG B 81 REMARK 465 SER B 82 REMARK 465 ARG B 83 REMARK 465 SER B 84 REMARK 465 ARG B 85 REMARK 465 SER B 86 REMARK 465 ARG B 87 REMARK 465 ASP B 88 REMARK 465 ARG B 89 REMARK 465 ARG B 90 REMARK 465 PHE B 91 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 191 OD2 ASP A 226 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 57 51.68 72.68 REMARK 500 GLU A 122 144.96 82.07 REMARK 500 ARG A 170 60.53 66.63 REMARK 500 GLN A 200 -5.14 -55.64 REMARK 500 ARG A 205 46.05 33.04 REMARK 500 VAL A 294 -39.48 -37.14 REMARK 500 TRP A 373 125.64 -32.37 REMARK 500 ARG A 391 -133.22 46.16 REMARK 500 CYS A 512 -128.19 48.86 REMARK 500 GLN A 598 -127.41 39.19 REMARK 500 CYS A 698 69.85 -163.19 REMARK 500 VAL A 750 -39.84 -131.13 REMARK 500 ASP A 806 85.65 -68.91 REMARK 500 ASN A 824 65.82 -151.11 REMARK 500 ASP A 866 2.96 -63.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4JLQ RELATED DB: PDB REMARK 900 RELATED ID: NYSGRC-020458 RELATED DB: TARGETTRACK DBREF 4OO6 A 1 359 UNP Q92973 TNPO1_HUMAN 9 331 DBREF 4OO6 A 367 890 UNP Q92973 TNPO1_HUMAN 375 898 DBREF 4OO6 B 73 99 UNP Q14498 RBM39_HUMAN 73 99 SEQADV 4OO6 GLY A 360 UNP Q92973 LINKER SEQADV 4OO6 GLY A 361 UNP Q92973 LINKER SEQADV 4OO6 SER A 362 UNP Q92973 LINKER SEQADV 4OO6 GLY A 363 UNP Q92973 LINKER SEQADV 4OO6 GLY A 364 UNP Q92973 LINKER SEQADV 4OO6 SER A 365 UNP Q92973 LINKER SEQADV 4OO6 GLY A 366 UNP Q92973 LINKER SEQRES 1 A 854 MET GLU TYR GLU TRP LYS PRO ASP GLU GLN GLY LEU GLN SEQRES 2 A 854 GLN ILE LEU GLN LEU LEU LYS GLU SER GLN SER PRO ASP SEQRES 3 A 854 THR THR ILE GLN ARG THR VAL GLN GLN LYS LEU GLU GLN SEQRES 4 A 854 LEU ASN GLN TYR PRO ASP PHE ASN ASN TYR LEU ILE PHE SEQRES 5 A 854 VAL LEU THR LYS LEU LYS SER GLU ASP GLU PRO THR ARG SEQRES 6 A 854 SER LEU SER GLY LEU ILE LEU LYS ASN ASN VAL LYS ALA SEQRES 7 A 854 HIS PHE GLN ASN PHE PRO ASN GLY VAL THR ASP PHE ILE SEQRES 8 A 854 LYS SER GLU CYS LEU ASN ASN ILE GLY ASP SER SER PRO SEQRES 9 A 854 LEU ILE ARG ALA THR VAL GLY ILE LEU ILE THR THR ILE SEQRES 10 A 854 ALA SER LYS GLY GLU LEU GLN ASN TRP PRO ASP LEU LEU SEQRES 11 A 854 PRO LYS LEU CYS SER LEU LEU ASP SER GLU ASP TYR ASN SEQRES 12 A 854 THR CYS GLU GLY ALA PHE GLY ALA LEU GLN LYS ILE CYS SEQRES 13 A 854 GLU ASP SER ALA GLU ILE LEU ASP SER ASP VAL LEU ASP SEQRES 14 A 854 ARG PRO LEU ASN ILE MET ILE PRO LYS PHE LEU GLN PHE SEQRES 15 A 854 PHE LYS HIS SER SER PRO LYS ILE ARG SER HIS ALA VAL SEQRES 16 A 854 ALA CYS VAL ASN GLN PHE ILE ILE SER ARG THR GLN ALA SEQRES 17 A 854 LEU MET LEU HIS ILE ASP SER PHE ILE GLU ASN LEU PHE SEQRES 18 A 854 ALA LEU ALA GLY ASP GLU GLU PRO GLU VAL ARG LYS ASN SEQRES 19 A 854 VAL CYS ARG ALA LEU VAL MET LEU LEU GLU VAL ARG MET SEQRES 20 A 854 ASP ARG LEU LEU PRO HIS MET HIS ASN ILE VAL GLU TYR SEQRES 21 A 854 MET LEU GLN ARG THR GLN ASP GLN ASP GLU ASN VAL ALA SEQRES 22 A 854 LEU GLU ALA CYS GLU PHE TRP LEU THR LEU ALA GLU GLN SEQRES 23 A 854 PRO ILE CYS LYS ASP VAL LEU VAL ARG HIS LEU PRO LYS SEQRES 24 A 854 LEU ILE PRO VAL LEU VAL ASN GLY MET LYS TYR SER ASP SEQRES 25 A 854 ILE ASP ILE ILE LEU LEU LYS GLY ASP VAL GLU GLY GLY SEQRES 26 A 854 SER GLY GLY SER GLY ASP ASP THR ILE SER ASP TRP ASN SEQRES 27 A 854 LEU ARG LYS CYS SER ALA ALA ALA LEU ASP VAL LEU ALA SEQRES 28 A 854 ASN VAL TYR ARG ASP GLU LEU LEU PRO HIS ILE LEU PRO SEQRES 29 A 854 LEU LEU LYS GLU LEU LEU PHE HIS HIS GLU TRP VAL VAL SEQRES 30 A 854 LYS GLU SER GLY ILE LEU VAL LEU GLY ALA ILE ALA GLU SEQRES 31 A 854 GLY CYS MET GLN GLY MET ILE PRO TYR LEU PRO GLU LEU SEQRES 32 A 854 ILE PRO HIS LEU ILE GLN CYS LEU SER ASP LYS LYS ALA SEQRES 33 A 854 LEU VAL ARG SER ILE THR CYS TRP THR LEU SER ARG TYR SEQRES 34 A 854 ALA HIS TRP VAL VAL SER GLN PRO PRO ASP THR TYR LEU SEQRES 35 A 854 LYS PRO LEU MET THR GLU LEU LEU LYS ARG ILE LEU ASP SEQRES 36 A 854 SER ASN LYS ARG VAL GLN GLU ALA ALA CYS SER ALA PHE SEQRES 37 A 854 ALA THR LEU GLU GLU GLU ALA CYS THR GLU LEU VAL PRO SEQRES 38 A 854 TYR LEU ALA TYR ILE LEU ASP THR LEU VAL PHE ALA PHE SEQRES 39 A 854 SER LYS TYR GLN HIS LYS ASN LEU LEU ILE LEU TYR ASP SEQRES 40 A 854 ALA ILE GLY THR LEU ALA ASP SER VAL GLY HIS HIS LEU SEQRES 41 A 854 ASN LYS PRO GLU TYR ILE GLN MET LEU MET PRO PRO LEU SEQRES 42 A 854 ILE GLN LYS TRP ASN MET LEU LYS ASP GLU ASP LYS ASP SEQRES 43 A 854 LEU PHE PRO LEU LEU GLU CYS LEU SER SER VAL ALA THR SEQRES 44 A 854 ALA LEU GLN SER GLY PHE LEU PRO TYR CYS GLU PRO VAL SEQRES 45 A 854 TYR GLN ARG CYS VAL ASN LEU VAL GLN LYS THR LEU ALA SEQRES 46 A 854 GLN ALA MET LEU ASN ASN ALA GLN PRO ASP GLN TYR GLU SEQRES 47 A 854 ALA PRO ASP LYS ASP PHE MET ILE VAL ALA LEU ASP LEU SEQRES 48 A 854 LEU SER GLY LEU ALA GLU GLY LEU GLY GLY ASN ILE GLU SEQRES 49 A 854 GLN LEU VAL ALA ARG SER ASN ILE LEU THR LEU MET TYR SEQRES 50 A 854 GLN CYS MET GLN ASP LYS MET PRO GLU VAL ARG GLN SER SEQRES 51 A 854 SER PHE ALA LEU LEU GLY ASP LEU THR LYS ALA CYS PHE SEQRES 52 A 854 GLN HIS VAL LYS PRO CYS ILE ALA ASP PHE MET PRO ILE SEQRES 53 A 854 LEU GLY THR ASN LEU ASN PRO GLU PHE ILE SER VAL CYS SEQRES 54 A 854 ASN ASN ALA THR TRP ALA ILE GLY GLU ILE SER ILE GLN SEQRES 55 A 854 MET GLY ILE GLU MET GLN PRO TYR ILE PRO MET VAL LEU SEQRES 56 A 854 HIS GLN LEU VAL GLU ILE ILE ASN ARG PRO ASN THR PRO SEQRES 57 A 854 LYS THR LEU LEU GLU ASN THR ALA ILE THR ILE GLY ARG SEQRES 58 A 854 LEU GLY TYR VAL CYS PRO GLN GLU VAL ALA PRO MET LEU SEQRES 59 A 854 GLN GLN PHE ILE ARG PRO TRP CYS THR SER LEU ARG ASN SEQRES 60 A 854 ILE ARG ASP ASN GLU GLU LYS ASP SER ALA PHE ARG GLY SEQRES 61 A 854 ILE CYS THR MET ILE SER VAL ASN PRO SER GLY VAL ILE SEQRES 62 A 854 GLN ASP PHE ILE PHE PHE CYS ASP ALA VAL ALA SER TRP SEQRES 63 A 854 ILE ASN PRO LYS ASP ASP LEU ARG ASP MET PHE CYS LYS SEQRES 64 A 854 ILE LEU HIS GLY PHE LYS ASN GLN VAL GLY ASP GLU ASN SEQRES 65 A 854 TRP ARG ARG PHE SER ASP GLN PHE PRO LEU PRO LEU LYS SEQRES 66 A 854 GLU ARG LEU ALA ALA PHE TYR GLY VAL SEQRES 1 B 27 ARG SER ARG SER LYS GLU ARG ARG ARG SER ARG SER ARG SEQRES 2 B 27 SER ARG ASP ARG ARG PHE ARG GLY ARG TYR ARG SER PRO SEQRES 3 B 27 TYR FORMUL 3 HOH *18(H2 O) HELIX 1 1 ASP A 8 GLN A 23 1 16 HELIX 2 2 ASP A 26 ASN A 41 1 16 HELIX 3 3 TYR A 43 LYS A 56 1 14 HELIX 4 4 ASP A 61 PHE A 80 1 20 HELIX 5 5 PRO A 84 ASN A 98 1 15 HELIX 6 6 SER A 103 GLY A 121 1 19 HELIX 7 7 ASP A 128 LEU A 137 1 10 HELIX 8 8 ASP A 141 ASP A 164 1 24 HELIX 9 9 SER A 165 ARG A 170 5 6 HELIX 10 10 PRO A 171 PHE A 182 1 12 HELIX 11 11 PHE A 183 HIS A 185 5 3 HELIX 12 12 SER A 187 GLN A 200 1 14 HELIX 13 13 THR A 206 HIS A 212 1 7 HELIX 14 14 HIS A 212 ALA A 222 1 11 HELIX 15 15 GLU A 228 ARG A 246 1 19 HELIX 16 16 ARG A 246 LEU A 251 1 6 HELIX 17 17 HIS A 253 GLN A 266 1 14 HELIX 18 18 ASP A 269 GLU A 285 1 17 HELIX 19 19 ILE A 288 VAL A 294 1 7 HELIX 20 20 HIS A 296 GLY A 307 1 12 HELIX 21 21 SER A 311 LEU A 318 1 8 HELIX 22 22 ASN A 374 ARG A 391 1 18 HELIX 23 23 LEU A 394 LEU A 406 1 13 HELIX 24 24 GLU A 410 ILE A 424 1 15 HELIX 25 25 ILE A 424 ILE A 433 1 10 HELIX 26 26 TYR A 435 LEU A 447 1 13 HELIX 27 27 LYS A 451 ARG A 464 1 14 HELIX 28 28 TYR A 465 GLN A 472 1 8 HELIX 29 29 TYR A 477 LEU A 490 1 14 HELIX 30 30 ASN A 493 CYS A 512 1 20 HELIX 31 31 THR A 513 PRO A 517 5 5 HELIX 32 32 TYR A 518 TYR A 533 1 16 HELIX 33 33 GLN A 534 GLY A 553 1 20 HELIX 34 34 HIS A 554 ASN A 557 5 4 HELIX 35 35 LYS A 558 LEU A 576 1 19 HELIX 36 36 ASP A 582 GLN A 598 1 17 HELIX 37 37 PHE A 601 GLN A 629 1 29 HELIX 38 38 LYS A 638 GLY A 656 1 19 HELIX 39 39 ILE A 659 ALA A 664 1 6 HELIX 40 40 ASN A 667 MET A 676 1 10 HELIX 41 41 MET A 680 CYS A 698 1 19 HELIX 42 42 PHE A 699 PRO A 704 5 6 HELIX 43 43 CYS A 705 LEU A 717 1 13 HELIX 44 44 ASN A 718 GLU A 720 5 3 HELIX 45 45 PHE A 721 GLY A 740 1 20 HELIX 46 46 ILE A 741 GLN A 744 5 4 HELIX 47 47 ILE A 747 ASN A 759 1 13 HELIX 48 48 PRO A 764 CYS A 782 1 19 HELIX 49 49 CYS A 782 ALA A 787 1 6 HELIX 50 50 MET A 789 ARG A 802 1 14 HELIX 51 51 ASN A 807 ASN A 824 1 18 HELIX 52 52 VAL A 828 GLN A 830 5 3 HELIX 53 53 ASP A 831 SER A 841 1 11 HELIX 54 54 LYS A 846 GLY A 865 1 20 HELIX 55 55 GLU A 867 ASP A 874 1 8 HELIX 56 56 PRO A 877 GLY A 889 1 13 CRYST1 126.584 162.152 68.501 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007900 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006167 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014598 0.00000