HEADER VIRAL PROTEIN 06-FEB-14 4OPO TITLE CRYSTAL STRUCTURE OF P DOMAIN FROM NOROVIRUS STRAIN SAGA4 IN COMPLEX TITLE 2 WITH HBGA TYPE LEB (TETRAGLYCAN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: VP1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: P DOMAIN SAGA4 (UNP RESIDUES 225-530); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOROVIRUS HU/GII-4/KUMAMOTO5/2006/JP; SOURCE 3 ORGANISM_TAXID: 546987; SOURCE 4 GENE: AB447457; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MBP-HTSHP KEYWDS NOROVIRUS, VIRAL CAPSID PROTEIN, HISTO BLOOD GROUP ANTIGEN (HBGA), KEYWDS 2 PROTRUDING DOMAIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.K.SINGH,G.S.HANSMAN REVDAT 4 28-FEB-24 4OPO 1 HETSYN REVDAT 3 29-JUL-20 4OPO 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 11-FEB-15 4OPO 1 JRNL REVDAT 1 17-DEC-14 4OPO 0 JRNL AUTH B.K.SINGH,M.M.LEUTHOLD,G.S.HANSMAN JRNL TITL HUMAN NOROVIRUSES' FONDNESS FOR HISTO-BLOOD GROUP ANTIGENS. JRNL REF J.VIROL. V. 89 2024 2015 JRNL REFN ISSN 0022-538X JRNL PMID 25428879 JRNL DOI 10.1128/JVI.02968-14 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 119485 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5975 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4500 - 4.3490 0.94 3710 196 0.1659 0.1889 REMARK 3 2 4.3490 - 3.4523 0.99 3816 201 0.1388 0.1537 REMARK 3 3 3.4523 - 3.0160 1.00 3831 202 0.1426 0.1858 REMARK 3 4 3.0160 - 2.7403 1.00 3831 201 0.1535 0.1709 REMARK 3 5 2.7403 - 2.5439 1.00 3790 200 0.1509 0.1820 REMARK 3 6 2.5439 - 2.3939 1.00 3826 201 0.1479 0.1861 REMARK 3 7 2.3939 - 2.2740 1.00 3786 200 0.1389 0.1789 REMARK 3 8 2.2740 - 2.1750 1.00 3804 200 0.1297 0.1770 REMARK 3 9 2.1750 - 2.0913 1.00 3792 199 0.1341 0.1804 REMARK 3 10 2.0913 - 2.0191 1.00 3780 199 0.1294 0.1549 REMARK 3 11 2.0191 - 1.9560 1.00 3776 199 0.1280 0.1608 REMARK 3 12 1.9560 - 1.9001 1.00 3830 202 0.1354 0.1858 REMARK 3 13 1.9001 - 1.8501 1.00 3794 199 0.1371 0.1643 REMARK 3 14 1.8501 - 1.8049 1.00 3784 200 0.1364 0.1652 REMARK 3 15 1.8049 - 1.7639 1.00 3783 199 0.1343 0.1780 REMARK 3 16 1.7639 - 1.7264 1.00 3735 196 0.1435 0.1917 REMARK 3 17 1.7264 - 1.6918 1.00 3801 200 0.1514 0.2030 REMARK 3 18 1.6918 - 1.6599 1.00 3795 200 0.1556 0.1935 REMARK 3 19 1.6599 - 1.6302 1.00 3770 199 0.1523 0.1929 REMARK 3 20 1.6302 - 1.6026 1.00 3792 199 0.1548 0.1956 REMARK 3 21 1.6026 - 1.5768 1.00 3759 198 0.1562 0.1906 REMARK 3 22 1.5768 - 1.5525 1.00 3793 200 0.1631 0.2065 REMARK 3 23 1.5525 - 1.5297 1.00 3791 199 0.1777 0.2254 REMARK 3 24 1.5297 - 1.5081 0.99 3743 197 0.1874 0.2243 REMARK 3 25 1.5081 - 1.4877 1.00 3737 196 0.1901 0.2510 REMARK 3 26 1.4877 - 1.4684 1.00 3800 200 0.1943 0.2371 REMARK 3 27 1.4684 - 1.4501 1.00 3750 197 0.1961 0.2503 REMARK 3 28 1.4501 - 1.4326 1.00 3789 200 0.2173 0.2696 REMARK 3 29 1.4326 - 1.4159 0.99 3762 198 0.2299 0.2709 REMARK 3 30 1.4159 - 1.4000 0.99 3760 198 0.2491 0.2856 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5122 REMARK 3 ANGLE : 1.202 7004 REMARK 3 CHIRALITY : 0.072 794 REMARK 3 PLANARITY : 0.006 913 REMARK 3 DIHEDRAL : 12.300 1863 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN B AND RESID 607:610 ) REMARK 3 ORIGIN FOR THE GROUP (A): 132.693 3.886 24.246 REMARK 3 T TENSOR REMARK 3 T11: 0.6428 T22: 0.0119 REMARK 3 T33: 0.3489 T12: 0.4112 REMARK 3 T13: -0.0578 T23: -0.1944 REMARK 3 L TENSOR REMARK 3 L11: 0.0299 L22: 0.0035 REMARK 3 L33: 0.0141 L12: -0.0115 REMARK 3 L13: 0.0286 L23: -0.0109 REMARK 3 S TENSOR REMARK 3 S11: -0.0389 S12: 0.0405 S13: 0.1178 REMARK 3 S21: -0.0875 S22: -0.0649 S23: 0.0768 REMARK 3 S31: -0.0618 S32: -0.1749 S33: -0.0173 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESID 603:606 ) REMARK 3 ORIGIN FOR THE GROUP (A): 149.822 -2.596 20.954 REMARK 3 T TENSOR REMARK 3 T11: 0.2887 T22: 0.2228 REMARK 3 T33: 0.1926 T12: -0.0950 REMARK 3 T13: -0.0173 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 0.0102 L22: 0.0061 REMARK 3 L33: 0.0042 L12: 0.0040 REMARK 3 L13: 0.0118 L23: 0.0042 REMARK 3 S TENSOR REMARK 3 S11: -0.0554 S12: -0.0561 S13: 0.1441 REMARK 3 S21: 0.1125 S22: -0.1722 S23: -0.0137 REMARK 3 S31: -0.1416 S32: 0.2140 S33: -0.0037 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OPO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000084793. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979701 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 124462 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.380 REMARK 200 RESOLUTION RANGE LOW (A) : 46.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.93000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, PH 6.9, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.83000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.83000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 817 LIES ON A SPECIAL POSITION. REMARK 375 HOH B1087 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR B 222 REMARK 465 GLY B 223 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 222 OG1 CG2 REMARK 470 GLU A 372 CG CD OE1 OE2 REMARK 470 ASN A 373 CG OD1 ND2 REMARK 470 ASN B 307 CG OD1 ND2 REMARK 470 GLU B 372 CG CD OE1 OE2 REMARK 470 ASN B 373 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL B 281 O HOH B 1031 2.02 REMARK 500 O HOH B 951 O HOH B 1126 2.07 REMARK 500 NH2 ARG A 287 O HOH A 997 2.16 REMARK 500 O HOH A 1083 O HOH A 1086 2.18 REMARK 500 O4 NAG D 1 O5 FUC D 4 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 260 48.77 -140.54 REMARK 500 ALA A 319 166.30 177.28 REMARK 500 ASN A 373 -8.52 -149.64 REMARK 500 SER A 442 140.30 176.65 REMARK 500 VAL A 521 -164.75 -121.53 REMARK 500 SER B 254 23.53 -141.90 REMARK 500 ASN B 373 -6.97 -148.42 REMARK 500 SER B 442 145.95 175.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OOX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF P DOMAIN FROM NOROVIRUS STRAIN SAGA4 REMARK 900 RELATED ID: 4OP7 RELATED DB: PDB REMARK 900 RELATED ID: 4OOS RELATED DB: PDB REMARK 900 RELATED ID: 4OOV RELATED DB: PDB REMARK 900 RELATED ID: 4OPS RELATED DB: PDB DBREF 4OPO A 225 530 UNP B5BTT5 B5BTT5_9CALI 225 530 DBREF 4OPO B 225 530 UNP B5BTT5 B5BTT5_9CALI 225 530 SEQADV 4OPO THR A 222 UNP B5BTT5 EXPRESSION TAG SEQADV 4OPO GLY A 223 UNP B5BTT5 EXPRESSION TAG SEQADV 4OPO SER A 224 UNP B5BTT5 EXPRESSION TAG SEQADV 4OPO THR B 222 UNP B5BTT5 EXPRESSION TAG SEQADV 4OPO GLY B 223 UNP B5BTT5 EXPRESSION TAG SEQADV 4OPO SER B 224 UNP B5BTT5 EXPRESSION TAG SEQRES 1 A 309 THR GLY SER LYS PRO PHE THR VAL PRO ILE LEU THR VAL SEQRES 2 A 309 GLU GLU MET THR ASN SER ARG PHE PRO ILE PRO LEU GLU SEQRES 3 A 309 LYS LEU PHE THR GLY PRO SER GLY ALA PHE VAL VAL GLN SEQRES 4 A 309 PRO GLN ASN GLY ARG CYS THR THR ASP GLY VAL LEU LEU SEQRES 5 A 309 GLY THR THR GLN LEU SER PRO VAL ASN ILE CYS THR PHE SEQRES 6 A 309 ARG GLY ASP VAL THR HIS ILE ALA GLY SER ARG ASN TYR SEQRES 7 A 309 THR MET ASN LEU ALA SER LEU ASN TRP ASN ASN TYR ASP SEQRES 8 A 309 PRO THR GLU GLU ILE PRO ALA PRO LEU GLY THR PRO ASP SEQRES 9 A 309 PHE VAL GLY LYS ILE GLN GLY LEU LEU THR GLN THR THR SEQRES 10 A 309 LYS GLY ASP GLY SER THR ARG GLY HIS LYS ALA THR VAL SEQRES 11 A 309 TYR THR GLY SER ALA PRO PHE THR PRO LYS LEU GLY SER SEQRES 12 A 309 VAL GLN PHE SER THR ASP THR GLU ASN ASP PHE GLU THR SEQRES 13 A 309 HIS GLN ASN THR LYS PHE THR PRO VAL GLY VAL ILE GLN SEQRES 14 A 309 ASP GLY SER THR THR HIS ARG ASN GLU PRO GLN GLN TRP SEQRES 15 A 309 VAL LEU PRO SER TYR SER GLY ARG ASN VAL HIS ASN VAL SEQRES 16 A 309 HIS LEU ALA PRO ALA VAL ALA PRO THR PHE PRO GLY GLU SEQRES 17 A 309 GLN LEU LEU PHE PHE ARG SER THR MET PRO GLY CYS SER SEQRES 18 A 309 GLY TYR PRO ASN MET ASP LEU ASP CYS LEU LEU PRO GLN SEQRES 19 A 309 GLU TRP VAL GLN HIS PHE TYR GLN GLU ALA ALA PRO ALA SEQRES 20 A 309 GLN SER ASP VAL ALA LEU LEU ARG PHE VAL ASN PRO ASP SEQRES 21 A 309 THR GLY ARG VAL LEU PHE GLU CYS LYS LEU HIS LYS SER SEQRES 22 A 309 GLY TYR VAL THR VAL ALA HIS THR GLY GLN HIS ASP LEU SEQRES 23 A 309 VAL ILE PRO PRO ASN GLY TYR PHE ARG PHE ASP SER TRP SEQRES 24 A 309 VAL ASN GLN PHE TYR THR LEU ALA PRO MET SEQRES 1 B 309 THR GLY SER LYS PRO PHE THR VAL PRO ILE LEU THR VAL SEQRES 2 B 309 GLU GLU MET THR ASN SER ARG PHE PRO ILE PRO LEU GLU SEQRES 3 B 309 LYS LEU PHE THR GLY PRO SER GLY ALA PHE VAL VAL GLN SEQRES 4 B 309 PRO GLN ASN GLY ARG CYS THR THR ASP GLY VAL LEU LEU SEQRES 5 B 309 GLY THR THR GLN LEU SER PRO VAL ASN ILE CYS THR PHE SEQRES 6 B 309 ARG GLY ASP VAL THR HIS ILE ALA GLY SER ARG ASN TYR SEQRES 7 B 309 THR MET ASN LEU ALA SER LEU ASN TRP ASN ASN TYR ASP SEQRES 8 B 309 PRO THR GLU GLU ILE PRO ALA PRO LEU GLY THR PRO ASP SEQRES 9 B 309 PHE VAL GLY LYS ILE GLN GLY LEU LEU THR GLN THR THR SEQRES 10 B 309 LYS GLY ASP GLY SER THR ARG GLY HIS LYS ALA THR VAL SEQRES 11 B 309 TYR THR GLY SER ALA PRO PHE THR PRO LYS LEU GLY SER SEQRES 12 B 309 VAL GLN PHE SER THR ASP THR GLU ASN ASP PHE GLU THR SEQRES 13 B 309 HIS GLN ASN THR LYS PHE THR PRO VAL GLY VAL ILE GLN SEQRES 14 B 309 ASP GLY SER THR THR HIS ARG ASN GLU PRO GLN GLN TRP SEQRES 15 B 309 VAL LEU PRO SER TYR SER GLY ARG ASN VAL HIS ASN VAL SEQRES 16 B 309 HIS LEU ALA PRO ALA VAL ALA PRO THR PHE PRO GLY GLU SEQRES 17 B 309 GLN LEU LEU PHE PHE ARG SER THR MET PRO GLY CYS SER SEQRES 18 B 309 GLY TYR PRO ASN MET ASP LEU ASP CYS LEU LEU PRO GLN SEQRES 19 B 309 GLU TRP VAL GLN HIS PHE TYR GLN GLU ALA ALA PRO ALA SEQRES 20 B 309 GLN SER ASP VAL ALA LEU LEU ARG PHE VAL ASN PRO ASP SEQRES 21 B 309 THR GLY ARG VAL LEU PHE GLU CYS LYS LEU HIS LYS SER SEQRES 22 B 309 GLY TYR VAL THR VAL ALA HIS THR GLY GLN HIS ASP LEU SEQRES 23 B 309 VAL ILE PRO PRO ASN GLY TYR PHE ARG PHE ASP SER TRP SEQRES 24 B 309 VAL ASN GLN PHE TYR THR LEU ALA PRO MET HET NAG C 1 15 HET GAL C 2 11 HET FUC C 3 10 HET FUC C 4 10 HET NAG D 1 15 HET GAL D 2 11 HET FUC D 3 10 HET FUC D 4 10 HET ACT A 601 4 HET EDO A 602 4 HET EDO A 603 4 HET ACT B 601 4 HET EDO B 602 4 HET EDO B 603 4 HET EDO B 604 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 3 GAL 2(C6 H12 O6) FORMUL 3 FUC 4(C6 H12 O5) FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 6 EDO 5(C2 H6 O2) FORMUL 12 HOH *812(H2 O) HELIX 1 1 THR A 233 MET A 237 5 5 HELIX 2 2 THR A 359 LEU A 362 5 4 HELIX 3 3 PRO A 454 ALA A 465 1 12 HELIX 4 4 THR B 233 MET B 237 5 5 HELIX 5 5 THR B 359 LEU B 362 5 4 HELIX 6 6 PRO B 454 ALA B 465 1 12 SHEET 1 A 4 ASP A 448 CYS A 451 0 SHEET 2 A 4 GLU A 429 THR A 437 -1 N PHE A 434 O CYS A 451 SHEET 3 A 4 LYS A 248 THR A 251 -1 N PHE A 250 O PHE A 433 SHEET 4 A 4 HIS A 505 ASP A 506 -1 O HIS A 505 N THR A 251 SHEET 1 B 6 ASP A 448 CYS A 451 0 SHEET 2 B 6 GLU A 429 THR A 437 -1 N PHE A 434 O CYS A 451 SHEET 3 B 6 TYR A 496 ALA A 500 -1 O VAL A 497 N LEU A 432 SHEET 4 B 6 VAL A 485 HIS A 492 -1 N HIS A 492 O TYR A 496 SHEET 5 B 6 VAL A 472 VAL A 478 -1 N ALA A 473 O LEU A 491 SHEET 6 B 6 TYR A 514 VAL A 521 -1 O SER A 519 N LEU A 474 SHEET 1 C 8 THR B 381 ILE B 389 0 SHEET 2 C 8 GLY B 440 GLY B 443 1 O CYS B 441 N VAL B 388 SHEET 3 C 8 THR A 344 TYR A 352 -1 N THR A 344 O GLY B 443 SHEET 4 C 8 LYS A 329 THR A 337 -1 N LEU A 334 O HIS A 347 SHEET 5 C 8 THR A 381 ILE A 389 -1 O LYS A 382 N THR A 335 SHEET 6 C 8 PHE A 286 HIS A 292 -1 N PHE A 286 O PHE A 383 SHEET 7 C 8 ASN A 298 LEU A 303 -1 O THR A 300 N THR A 291 SHEET 8 C 8 SER A 364 THR A 369 -1 O VAL A 365 N MET A 301 SHEET 1 D 6 THR B 344 TYR B 352 0 SHEET 2 D 6 SER B 364 THR B 369 -1 O SER B 368 N THR B 350 SHEET 3 D 6 ASN B 298 LEU B 303 -1 N MET B 301 O VAL B 365 SHEET 4 D 6 PHE B 286 HIS B 292 -1 N ASP B 289 O ASN B 302 SHEET 5 D 6 THR B 381 ILE B 389 -1 O PHE B 383 N PHE B 286 SHEET 6 D 6 LYS B 329 THR B 337 -1 N THR B 335 O LYS B 382 SHEET 1 E 3 THR B 344 TYR B 352 0 SHEET 2 E 3 GLY A 440 GLY A 443 -1 N GLY A 443 O THR B 344 SHEET 3 E 3 THR A 381 ILE A 389 1 N VAL A 388 O CYS A 441 SHEET 1 F 4 ASP B 448 CYS B 451 0 SHEET 2 F 4 GLU B 429 THR B 437 -1 N PHE B 434 O CYS B 451 SHEET 3 F 4 LYS B 248 THR B 251 -1 N PHE B 250 O PHE B 433 SHEET 4 F 4 HIS B 505 ASP B 506 -1 O HIS B 505 N THR B 251 SHEET 1 G 6 ASP B 448 CYS B 451 0 SHEET 2 G 6 GLU B 429 THR B 437 -1 N PHE B 434 O CYS B 451 SHEET 3 G 6 TYR B 496 ALA B 500 -1 O VAL B 499 N GLN B 430 SHEET 4 G 6 VAL B 485 HIS B 492 -1 N HIS B 492 O TYR B 496 SHEET 5 G 6 VAL B 472 VAL B 478 -1 N ALA B 473 O LEU B 491 SHEET 6 G 6 TYR B 514 VAL B 521 -1 O SER B 519 N LEU B 474 LINK O3 NAG C 1 C1 GAL C 2 1555 1555 1.38 LINK O4 NAG C 1 C1 FUC C 4 1555 1555 1.40 LINK O2 GAL C 2 C1 FUC C 3 1555 1555 1.45 LINK O3 NAG D 1 C1 GAL D 2 1555 1555 1.44 LINK O4 NAG D 1 C1 FUC D 4 1555 1555 1.44 LINK O2 GAL D 2 C1 FUC D 3 1555 1555 1.45 CISPEP 1 GLU A 399 PRO A 400 0 -9.73 CISPEP 2 GLU B 399 PRO B 400 0 -9.08 CRYST1 113.660 58.600 97.170 90.00 107.15 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008798 0.000000 0.002715 0.00000 SCALE2 0.000000 0.017065 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010770 0.00000