data_4OQ8 # _entry.id 4OQ8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4OQ8 pdb_00004oq8 10.2210/pdb4oq8/pdb NDB NA2915 ? ? RCSB RCSB084813 ? ? WWPDB D_1000084813 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1A34 'The same structure refined against room temperature data using strict icosahedral symmetry constraints' unspecified PDB 4NIA 'The same structure refined against room temperature data using NCS restraints' unspecified PDB 4OQ9 'The same structure refined against 100 K temperature data using NCS restraints' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4OQ8 _pdbx_database_status.recvd_initial_deposition_date 2014-02-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Larson, S.B.' 1 'Day, J.S.' 2 'McPherson, A.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Satellite tobacco mosaic virus refined to 1.4 angstrom resolution.' 'Acta Crystallogr.,Sect.D' 70 2316 2330 2014 ABCRE6 DK 0907-4449 0766 ? 25195746 10.1107/S1399004714013789 1 'Refined structure of satellite tobacco mosaic virus at 1.8 A resolution.' J.Mol.Biol. 277 37 59 1998 JMOBAK UK 0022-2836 0070 ? 9514737 10.1006/jmbi.1997.1570 2 'Three-dimensional structure of satellite tobacco mosaic virus at 2.9 A resolution.' J.Mol.Biol. 231 375 391 1993 JMOBAK UK 0022-2836 0070 ? 8510153 10.1006/jmbi.1993.1289 3 'Double-helical RNA in satellite tobacco mosaic virus.' Nature 361 179 182 1993 NATUAS UK 0028-0836 0006 ? 8421525 10.1038/361179a0 4 'Macromolecular crystal growth experiments on International Microgravity Laboratory--1.' 'Protein Sci.' 1 1254 1268 1992 PRCIEI US 0961-8368 0795 ? 1303744 10.1002/pro.5560011004 5 'Preliminary analysis of crystals of satellite tobacco mosaic virus.' J.Mol.Biol. 209 323 325 1989 JMOBAK UK 0022-2836 0070 ? 2585487 ? 6 'Satellite tobacco mosaic virus RNA: structure and implications for assembly.' Curr.Opin.Struct.Biol. 11 59 65 2001 COSBEF UK 0959-440X 0801 ? 11179893 ? 7 'A model for the structure of satellite tobacco mosaic virus.' J.Struct.Biol. 180 110 116 2012 JSBIEM US 1047-8477 0803 ? 22750417 10.1016/j.jsb.2012.06.008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Larson, S.B.' 1 ? primary 'Day, J.S.' 2 ? primary 'McPherson, A.' 3 ? 1 'Larson, S.B.' 4 ? 1 'Day, J.' 5 ? 1 'Greenwood, A.' 6 ? 1 'McPherson, A.' 7 ? 2 'Larson, S.B.' 8 ? 2 'Koszelak, S.' 9 ? 2 'Day, J.' 10 ? 2 'Greenwood, A.' 11 ? 2 'Dodds, J.A.' 12 ? 2 'McPherson, A.' 13 ? 3 'Larson, S.B.' 14 ? 3 'Koszelak, S.' 15 ? 3 'Day, J.' 16 ? 3 'Greenwood, A.' 17 ? 3 'Dodds, J.A.' 18 ? 3 'McPherson, A.' 19 ? 4 'Day, J.' 20 ? 4 'McPherson, A.' 21 ? 5 'Koszelak, S.' 22 ? 5 'Dodds, J.A.' 23 ? 5 'McPherson, A.' 24 ? 6 'Larson, S.B.' 25 ? 6 'McPherson, A.' 26 ? 7 'Zeng, Y.' 27 ? 7 'Larson, S.B.' 28 ? 7 'Heitsch, C.E.' 29 ? 7 'McPherson, A.' 30 ? 7 'Harvey, S.C.' 31 ? # _cell.entry_id 4OQ8 _cell.length_a 172.690 _cell.length_b 190.300 _cell.length_c 201.690 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4OQ8 _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Coat protein' 17533.949 1 ? ? ? ? 2 polymer nat ;RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') ; 3247.100 1 ? ? ? 'arbitrary RNA adenine nucleotide decamer' 3 polymer nat ;RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') ; 3016.700 1 ? ? ? 'arbitrary RNA uridine nucleotide decamer' 4 polymer nat ;RNA (5'-R(P*UP*U)-3') ; 567.374 1 ? ? ? 'arbitrary RNA uridine nucleotide dimer' 5 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 6 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 7 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 8 water nat water 18.015 277 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRA WTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN ; ;MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRA WTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN ; A ? 2 polyribonucleotide no no AAAAAAAAAA AAAAAAAAAA B ? 3 polyribonucleotide no no UUUUUUUUUU UUUUUUUUUU C ? 4 polyribonucleotide no no UU UU D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 ARG n 1 4 GLY n 1 5 LYS n 1 6 VAL n 1 7 LYS n 1 8 PRO n 1 9 ASN n 1 10 ARG n 1 11 LYS n 1 12 SER n 1 13 THR n 1 14 GLY n 1 15 ASP n 1 16 ASN n 1 17 SER n 1 18 ASN n 1 19 VAL n 1 20 VAL n 1 21 THR n 1 22 MET n 1 23 ILE n 1 24 ARG n 1 25 ALA n 1 26 GLY n 1 27 SER n 1 28 TYR n 1 29 PRO n 1 30 LYS n 1 31 VAL n 1 32 ASN n 1 33 PRO n 1 34 THR n 1 35 PRO n 1 36 THR n 1 37 TRP n 1 38 VAL n 1 39 ARG n 1 40 ALA n 1 41 ILE n 1 42 PRO n 1 43 PHE n 1 44 GLU n 1 45 VAL n 1 46 SER n 1 47 VAL n 1 48 GLN n 1 49 SER n 1 50 GLY n 1 51 ILE n 1 52 ALA n 1 53 PHE n 1 54 LYS n 1 55 VAL n 1 56 PRO n 1 57 VAL n 1 58 GLY n 1 59 SER n 1 60 LEU n 1 61 PHE n 1 62 SER n 1 63 ALA n 1 64 ASN n 1 65 PHE n 1 66 ARG n 1 67 THR n 1 68 ASP n 1 69 SER n 1 70 PHE n 1 71 THR n 1 72 SER n 1 73 VAL n 1 74 THR n 1 75 VAL n 1 76 MET n 1 77 SER n 1 78 VAL n 1 79 ARG n 1 80 ALA n 1 81 TRP n 1 82 THR n 1 83 GLN n 1 84 LEU n 1 85 THR n 1 86 PRO n 1 87 PRO n 1 88 VAL n 1 89 ASN n 1 90 GLU n 1 91 TYR n 1 92 SER n 1 93 PHE n 1 94 VAL n 1 95 ARG n 1 96 LEU n 1 97 LYS n 1 98 PRO n 1 99 LEU n 1 100 PHE n 1 101 LYS n 1 102 THR n 1 103 GLY n 1 104 ASP n 1 105 SER n 1 106 THR n 1 107 GLU n 1 108 GLU n 1 109 PHE n 1 110 GLU n 1 111 GLY n 1 112 ARG n 1 113 ALA n 1 114 SER n 1 115 ASN n 1 116 ILE n 1 117 ASN n 1 118 THR n 1 119 ARG n 1 120 ALA n 1 121 SER n 1 122 VAL n 1 123 GLY n 1 124 TYR n 1 125 ARG n 1 126 ILE n 1 127 PRO n 1 128 THR n 1 129 ASN n 1 130 LEU n 1 131 ARG n 1 132 GLN n 1 133 ASN n 1 134 THR n 1 135 VAL n 1 136 ALA n 1 137 ALA n 1 138 ASP n 1 139 ASN n 1 140 VAL n 1 141 CYS n 1 142 GLU n 1 143 VAL n 1 144 ARG n 1 145 SER n 1 146 ASN n 1 147 CYS n 1 148 ARG n 1 149 GLN n 1 150 VAL n 1 151 ALA n 1 152 LEU n 1 153 VAL n 1 154 ILE n 1 155 SER n 1 156 CYS n 1 157 CYS n 1 158 PHE n 1 159 ASN n 2 1 A n 2 2 A n 2 3 A n 2 4 A n 2 5 A n 2 6 A n 2 7 A n 2 8 A n 2 9 A n 2 10 A n 3 1 U n 3 2 U n 3 3 U n 3 4 U n 3 5 U n 3 6 U n 3 7 U n 3 8 U n 3 9 U n 3 10 U n 4 1 U n 4 2 U n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? STMV 'Satellite Tobacco Mosaic Virus' 12881 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 'grown in Nicotiana Tobacum plants' 2 1 sample ? ? STMV 'Satellite Tobacco Mosaic Virus' 12881 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? STMV 'Satellite Tobacco Mosaic Virus' 12881 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample ? ? STMV 'Satellite Tobacco Mosaic Virus' 12881 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP COAT_STMV P17574 1 ;MGRGKVKPNRKSTGDNSNVVTMIRAGSYPKVNPTPTWVRAIPFEVSVQSGIAFKVPVGSLFSANFRTDSFTSVTVMSVRA WTQLTPPVNEYSFVRLKPLFKTGDSTEEFEGRASNINTRASVGYRIPTNLRQNTVAADNVCEVRSNCRQVALVISCCFN ; 1 ? 2 PDB 4OQ8 4OQ8 2 ? ? ? 3 PDB 4OQ8 4OQ8 3 ? ? ? 4 PDB 4OQ8 4OQ8 4 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4OQ8 A 1 ? 159 ? P17574 1 ? 159 ? 1 159 2 2 4OQ8 B 1 ? 10 ? 4OQ8 161 ? 170 ? 161 170 3 3 4OQ8 C 1 ? 10 ? 4OQ8 181 ? 190 ? 181 190 4 4 4OQ8 D 1 ? 2 ? 4OQ8 195 ? 196 ? 195 196 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4OQ8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 6 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_percent_sol 46.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 296 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.50 _exptl_crystal_grow.pdbx_details ;crystals grown from 15% ammonium sulfate on earth with a reservoir of 15% ammonium sulfate over 14 days., pH 6.50, VAPOR DIFFUSION, SITTING DROP, temperature 296K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2003-10-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal, Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.06 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.06 # _reflns.entry_id 4OQ8 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 48.35 _reflns.d_resolution_high 1.4 _reflns.number_obs 613720 _reflns.number_all 643001 _reflns.percent_possible_obs 95.4 _reflns.pdbx_Rmerge_I_obs 0.100 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.6 _reflns.B_iso_Wilson_estimate 19.4 _reflns.pdbx_redundancy 7.23 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.40 1.45 67.3 .354 ? 2.9 2.17 ? 43070 831527 ? ? ? 1 1 1.45 1.51 95.5 .363 ? 3.2 2.90 ? 61111 705358 ? ? ? 2 1 1.51 1.58 98.0 .387 ? 3.7 4.01 ? 62700 561327 ? ? ? 3 1 1.58 1.66 99.0 .419 ? 4.1 5.74 ? 63508 510647 ? ? ? 4 1 1.66 1.76 99.5 .413 ? 4.7 7.14 ? 63761 483716 ? ? ? 5 1 1.76 1.90 99.1 .400 ? 5.2 7.61 ? 63596 455293 ? ? ? 6 1 1.90 2.09 98.6 .359 ? 6.0 8.06 ? 63318 364831 ? ? ? 7 1 2.09 2.39 98.6 .266 ? 7.7 8.85 ? 63441 251372 ? ? ? 8 1 2.39 3.02 99.2 .146 ? 14.2 11.01 ? 64091 177148 ? ? ? 9 1 3.02 48.35 99.4 .066 ? 31.4 12.77 ? 65124 93374 ? ? ? 10 1 # _refine.entry_id 4OQ8 _refine.ls_number_reflns_obs 570721 _refine.ls_number_reflns_all 570721 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF 0 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.35 _refine.ls_d_res_high 1.45 _refine.ls_percent_reflns_obs 98.5 _refine.ls_R_factor_obs 0.2784 _refine.ls_R_factor_all 0.2784 _refine.ls_R_factor_R_work 0.2776 _refine.ls_R_factor_R_free 0.2793 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 28359 _refine.ls_number_parameters 13624 _refine.ls_number_restraints 12660 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 39.23 _refine.aniso_B[1][1] -2.080 _refine.aniso_B[2][2] 2.396 _refine.aniso_B[3][3] -0.316 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'CNS 1.2 method' _refine.solvent_model_param_ksol 0.45 _refine.solvent_model_param_bsol 82.47 _refine.pdbx_solvent_vdw_probe_radii 1.0 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.0 _refine.pdbx_ls_cross_valid_method THOUGHOUT _refine.details 'Hydrogens were included in the refinements. Strict icosahedral symmetry was applied.' _refine.pdbx_starting_model 'PDB entry 1A34' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ISOTROPIC _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min 2.0 _refine.B_iso_max 161.95 _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4OQ8 _refine_analyze.Luzzati_coordinate_error_obs 0.30 _refine_analyze.Luzzati_sigma_a_obs 0.29 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.30 _refine_analyze.Luzzati_sigma_a_free 0.29 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 88 _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1118 _refine_hist.pdbx_number_atoms_nucleic_acid 448 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 277 _refine_hist.number_atoms_total 1859 _refine_hist.d_res_high 1.45 _refine_hist.d_res_low 48.35 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.0068 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.280 ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d 17.992 ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d 1.401 ? ? ? ? 'X-RAY DIFFRACTION' c_mcbond_it 1.18 2.0 ? ? ? 'X-RAY DIFFRACTION' c_mcangle_it 1.81 8.0 ? ? ? 'X-RAY DIFFRACTION' c_scbond_it 7.79 20.0 ? ? ? 'X-RAY DIFFRACTION' c_scangle_it 10.12 32.0 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 10 1.45 1.50 51194 0.5216 93.33 0.5171 0.0099 5.3 2702 . . 53896 . 'X-RAY DIFFRACTION' 10 1.50 1.56 53571 0.4295 97.63 0.4334 0.0083 . 2709 . . 56280 . 'X-RAY DIFFRACTION' 10 1.56 1.63 54501 0.3442 99.06 0.3408 0.0064 . 2798 . . 57299 . 'X-RAY DIFFRACTION' 10 1.63 1.72 54461 0.3136 99.39 0.3208 0.0059 . 2950 . . 57411 . 'X-RAY DIFFRACTION' 10 1.72 1.83 54594 0.3244 99.34 0.3221 0.0060 . 2867 . . 57461 . 'X-RAY DIFFRACTION' 10 1.83 1.97 54394 0.3682 98.72 0.3781 0.0071 . 2797 . . 57191 . 'X-RAY DIFFRACTION' 10 1.97 2.16 54141 0.3601 98.54 0.3666 0.0067 . 2953 . . 57094 . 'X-RAY DIFFRACTION' 10 2.16 2.48 54578 0.3087 98.76 0.3089 0.0058 . 2820 . . 57398 . 'X-RAY DIFFRACTION' 10 2.48 3.12 54986 0.2460 99.28 0.2496 0.0047 . 2871 . . 57857 . 'X-RAY DIFFRACTION' 10 3.12 48.35 55942 0.2140 99.39 0.2121 0.0039 . 2892 . . 58834 . 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN-ALLHDG.PARAM PROTEIN-ALLHDG.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA-ALLATOM.PARAM DNA-RNA-ALLATOM.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000 0.00000 0.00000 2 generate ? 0.50000000 0.30901700 0.80901699 0.30901700 0.80901699 -0.50000000 -0.80901699 0.50000000 0.30901700 0.00000 0.00000 0.00000 3 generate ? -0.30901700 0.80901700 0.50000000 0.80901700 0.50000000 -0.30901699 -0.50000000 0.30901700 -0.80901699 0.00000 0.00000 0.00000 4 generate ? -0.30901699 0.80901700 -0.50000000 0.80901699 0.50000000 0.30901700 0.50000000 -0.30901700 -0.80901700 0.00000 0.00000 0.00000 5 generate ? 0.50000000 0.30901699 -0.80901699 0.30901699 0.80901700 0.50000000 0.80901700 -0.50000000 0.30901699 0.00000 0.00000 0.00000 6 generate ? -0.80901699 0.50000001 0.30901700 0.49999999 0.30901699 0.80901700 0.30901699 0.80901699 -0.50000000 0.00000 0.00000 0.00000 7 generate ? -0.50000000 0.30901700 -0.80901699 -0.30901700 0.80901699 0.50000000 0.80901699 0.50000000 -0.30901700 0.00000 0.00000 0.00000 8 generate ? 0.50000000 -0.30901699 -0.80901700 -0.30901700 0.80901699 -0.50000000 0.80901699 0.50000000 0.30901699 0.00000 0.00000 0.00000 9 generate ? 0.80901700 -0.50000000 0.30901699 0.50000000 0.30901699 -0.80901700 0.30901699 0.80901699 0.50000000 0.00000 0.00000 0.00000 10 generate ? 0.00000000 0.00000000 1.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000 0.00000 0.00000 11 generate ? 0.80901699 0.50000000 0.30901699 0.50000001 -0.30901700 -0.80901699 -0.30901699 0.80901700 -0.49999999 0.00000 0.00000 0.00000 12 generate ? 0.30901700 0.80901699 0.50000000 0.80901699 -0.50000000 0.30901700 0.50000000 0.30901700 -0.80901699 0.00000 0.00000 0.00000 13 generate ? 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 1.00000000 0.00000000 0.00000000 0.00000 0.00000 0.00000 14 generate ? 0.30901699 0.80901699 -0.50000000 -0.80901700 0.50000000 0.30901699 0.50000000 0.30901700 0.80901699 0.00000 0.00000 0.00000 15 generate ? 0.80901699 0.50000000 -0.30901700 -0.50000000 0.30901699 -0.80901699 -0.30901699 0.80901700 0.50000000 0.00000 0.00000 0.00000 # _struct.entry_id 4OQ8 _struct.title 'Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraints' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OQ8 _struct_keywords.pdbx_keywords VIRUS/RNA _struct_keywords.text 'Double-helix RNA, Protein-RNA complex, Swiss Jelly-roll beta barrel, VIRUS-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 8 ? J N N 8 ? K N N 8 ? L N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 58 ? PHE A 61 ? GLY A 58 PHE A 61 5 ? 4 HELX_P HELX_P2 2 SER A 62 ? ARG A 66 ? SER A 62 ARG A 66 5 ? 5 HELX_P HELX_P3 3 PRO A 127 ? ARG A 131 ? PRO A 127 ARG A 131 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? E PO4 . O4 ? ? ? 1_555 H MG . MG ? ? A PO4 201 A MG 204 1_555 ? ? ? ? ? ? ? 2.352 ? ? hydrog1 hydrog ? ? B A 1 N1 A ? ? 1_555 C U 9 N3 A ? B A 161 C U 189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B A 1 N6 A ? ? 1_555 C U 9 O4 A ? B A 161 C U 189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B A 2 N1 A ? ? 1_555 C U 8 N3 A ? B A 162 C U 188 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B A 2 N6 A ? ? 1_555 C U 8 O4 A ? B A 162 C U 188 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B A 3 N1 A ? ? 1_555 C U 7 N3 A ? B A 163 C U 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B A 3 N6 A ? ? 1_555 C U 7 O4 A ? B A 163 C U 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B A 4 N1 A ? ? 1_555 C U 6 N3 A ? B A 164 C U 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B A 4 N6 A ? ? 1_555 C U 6 O4 A ? B A 164 C U 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B A 5 N1 A ? ? 1_555 C U 5 N3 A ? B A 165 C U 185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B A 5 N6 A ? ? 1_555 C U 5 O4 A ? B A 165 C U 185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B A 6 N1 A ? ? 1_555 C U 4 N3 A ? B A 166 C U 184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B A 6 N6 A ? ? 1_555 C U 4 O4 A ? B A 166 C U 184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B A 7 N1 A ? ? 1_555 C U 3 N3 A ? B A 167 C U 183 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B A 7 N6 A ? ? 1_555 C U 3 O4 A ? B A 167 C U 183 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B A 8 N1 A ? ? 1_555 C U 2 N3 A ? B A 168 C U 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B A 8 N6 A ? ? 1_555 C U 2 O4 A ? B A 168 C U 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B A 9 N1 A ? ? 1_555 C U 1 N3 A ? B A 169 C U 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B A 9 N6 A ? ? 1_555 C U 1 O4 A ? B A 169 C U 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 37 ? SER A 46 ? TRP A 37 SER A 46 A 2 GLN A 149 ? ASN A 159 ? GLN A 149 ASN A 159 A 3 SER A 72 ? THR A 82 ? SER A 72 THR A 82 A 4 SER A 121 ? ARG A 125 ? SER A 121 ARG A 125 B 1 PHE A 53 ? PRO A 56 ? PHE A 53 PRO A 56 B 2 ASN A 139 ? SER A 145 ? ASN A 139 SER A 145 B 3 PHE A 93 ? PRO A 98 ? PHE A 93 PRO A 98 B 4 PHE A 109 ? ARG A 112 ? PHE A 109 ARG A 112 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 43 ? N PHE A 43 O LEU A 152 ? O LEU A 152 A 2 3 O ALA A 151 ? O ALA A 151 N TRP A 81 ? N TRP A 81 A 3 4 N ALA A 80 ? N ALA A 80 O VAL A 122 ? O VAL A 122 B 1 2 N VAL A 55 ? N VAL A 55 O CYS A 141 ? O CYS A 141 B 2 3 O ARG A 144 ? O ARG A 144 N ARG A 95 ? N ARG A 95 B 3 4 N LEU A 96 ? N LEU A 96 O PHE A 109 ? O PHE A 109 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 201 ? 3 'BINDING SITE FOR RESIDUE PO4 A 201' AC2 Software A SO4 202 ? 3 'BINDING SITE FOR RESIDUE SO4 A 202' AC3 Software A SO4 203 ? 8 'BINDING SITE FOR RESIDUE SO4 A 203' AC4 Software A MG 204 ? 1 'BINDING SITE FOR RESIDUE MG A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ASN A 115 ? ASN A 115 . ? 1_555 ? 2 AC1 3 ASN A 117 ? ASN A 117 . ? 1_555 ? 3 AC1 3 MG H . ? MG A 204 . ? 1_555 ? 4 AC2 3 ASN A 117 ? ASN A 117 . ? 1_555 ? 5 AC2 3 HOH I . ? HOH A 371 . ? 1_555 ? 6 AC2 3 HOH I . ? HOH A 515 . ? 1_555 ? 7 AC3 8 PHE A 93 ? PHE A 93 . ? 1_555 ? 8 AC3 8 ARG A 95 ? ARG A 95 . ? 1_555 ? 9 AC3 8 HOH I . ? HOH A 321 . ? 1_555 ? 10 AC3 8 HOH I . ? HOH A 366 . ? 1_555 ? 11 AC3 8 HOH I . ? HOH A 450 . ? 1_555 ? 12 AC3 8 HOH I . ? HOH A 517 . ? 1_555 ? 13 AC3 8 HOH I . ? HOH A 523 . ? 1_555 ? 14 AC3 8 HOH I . ? HOH A 528 . ? 1_555 ? 15 AC4 1 PO4 E . ? PO4 A 201 . ? 1_555 ? # _database_PDB_matrix.entry_id 4OQ8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4OQ8 _atom_sites.fract_transf_matrix[1][1] 0.005791 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005255 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004958 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLY 2 2 ? ? ? A . n A 1 3 ARG 3 3 ? ? ? A . n A 1 4 GLY 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 VAL 6 6 ? ? ? A . n A 1 7 LYS 7 7 ? ? ? A . n A 1 8 PRO 8 8 ? ? ? A . n A 1 9 ASN 9 9 ? ? ? A . n A 1 10 ARG 10 10 ? ? ? A . n A 1 11 LYS 11 11 ? ? ? A . n A 1 12 SER 12 12 ? ? ? A . n A 1 13 THR 13 13 ? ? ? A . n A 1 14 GLY 14 14 ? ? ? A . n A 1 15 ASP 15 15 ? ? ? A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 MET 22 22 22 MET MET A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 TRP 37 37 37 TRP TRP A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 MET 76 76 76 MET MET A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 TRP 81 81 81 TRP TRP A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 PHE 93 93 93 PHE PHE A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 TYR 124 124 124 TYR TYR A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 THR 128 128 128 THR THR A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 GLN 132 132 132 GLN GLN A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 ASN 139 139 139 ASN ASN A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 CYS 141 141 141 CYS CYS A . n A 1 142 GLU 142 142 142 GLU GLU A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 ASN 146 146 146 ASN ASN A . n A 1 147 CYS 147 147 147 CYS CYS A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 GLN 149 149 149 GLN GLN A . n A 1 150 VAL 150 150 150 VAL VAL A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 ILE 154 154 154 ILE ILE A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 CYS 156 156 156 CYS CYS A . n A 1 157 CYS 157 157 157 CYS CYS A . n A 1 158 PHE 158 158 158 PHE PHE A . n A 1 159 ASN 159 159 159 ASN ASN A . n B 2 1 A 1 161 161 A A B . n B 2 2 A 2 162 162 A A B . n B 2 3 A 3 163 163 A A B . n B 2 4 A 4 164 164 A A B . n B 2 5 A 5 165 165 A A B . n B 2 6 A 6 166 166 A A B . n B 2 7 A 7 167 167 A A B . n B 2 8 A 8 168 168 A A B . n B 2 9 A 9 169 169 A A B . n B 2 10 A 10 170 170 A A B . n C 3 1 U 1 181 181 U U C . n C 3 2 U 2 182 182 U U C . n C 3 3 U 3 183 183 U U C . n C 3 4 U 4 184 184 U U C . n C 3 5 U 5 185 185 U U C . n C 3 6 U 6 186 186 U U C . n C 3 7 U 7 187 187 U U C . n C 3 8 U 8 188 188 U U C . n C 3 9 U 9 189 189 U U C . n C 3 10 U 10 190 190 U U C . n D 4 1 U 1 195 195 U U D . n D 4 2 U 2 196 196 U U D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 PO4 1 201 201 PO4 PO4 A . F 6 SO4 1 202 202 SO4 SO4 A . G 6 SO4 1 203 203 SO4 SO4 A . H 7 MG 1 204 204 MG MG A . I 8 HOH 1 301 212 HOH HOH A . I 8 HOH 2 302 213 HOH HOH A . I 8 HOH 3 303 214 HOH HOH A . I 8 HOH 4 304 215 HOH HOH A . I 8 HOH 5 305 216 HOH HOH A . I 8 HOH 6 306 217 HOH HOH A . I 8 HOH 7 307 218 HOH HOH A . I 8 HOH 8 308 219 HOH HOH A . I 8 HOH 9 309 220 HOH HOH A . I 8 HOH 10 310 221 HOH HOH A . I 8 HOH 11 311 222 HOH HOH A . I 8 HOH 12 312 223 HOH HOH A . I 8 HOH 13 313 224 HOH HOH A . I 8 HOH 14 314 225 HOH HOH A . I 8 HOH 15 315 226 HOH HOH A . I 8 HOH 16 316 227 HOH HOH A . I 8 HOH 17 317 228 HOH HOH A . I 8 HOH 18 318 229 HOH HOH A . I 8 HOH 19 319 230 HOH HOH A . I 8 HOH 20 320 231 HOH HOH A . I 8 HOH 21 321 232 HOH HOH A . I 8 HOH 22 322 233 HOH HOH A . I 8 HOH 23 323 234 HOH HOH A . I 8 HOH 24 324 235 HOH HOH A . I 8 HOH 25 325 236 HOH HOH A . I 8 HOH 26 326 237 HOH HOH A . I 8 HOH 27 327 238 HOH HOH A . I 8 HOH 28 328 239 HOH HOH A . I 8 HOH 29 329 240 HOH HOH A . I 8 HOH 30 330 241 HOH HOH A . I 8 HOH 31 331 242 HOH HOH A . I 8 HOH 32 332 243 HOH HOH A . I 8 HOH 33 333 244 HOH HOH A . I 8 HOH 34 334 245 HOH HOH A . I 8 HOH 35 335 246 HOH HOH A . I 8 HOH 36 336 247 HOH HOH A . I 8 HOH 37 337 248 HOH HOH A . I 8 HOH 38 338 249 HOH HOH A . I 8 HOH 39 339 250 HOH HOH A . I 8 HOH 40 340 251 HOH HOH A . I 8 HOH 41 341 252 HOH HOH A . I 8 HOH 42 342 253 HOH HOH A . I 8 HOH 43 343 254 HOH HOH A . I 8 HOH 44 344 255 HOH HOH A . I 8 HOH 45 345 256 HOH HOH A . I 8 HOH 46 346 257 HOH HOH A . I 8 HOH 47 347 258 HOH HOH A . I 8 HOH 48 348 259 HOH HOH A . I 8 HOH 49 349 260 HOH HOH A . I 8 HOH 50 350 261 HOH HOH A . I 8 HOH 51 351 262 HOH HOH A . I 8 HOH 52 352 263 HOH HOH A . I 8 HOH 53 353 264 HOH HOH A . I 8 HOH 54 354 265 HOH HOH A . I 8 HOH 55 355 266 HOH HOH A . I 8 HOH 56 356 267 HOH HOH A . I 8 HOH 57 357 268 HOH HOH A . I 8 HOH 58 358 269 HOH HOH A . I 8 HOH 59 359 270 HOH HOH A . I 8 HOH 60 360 271 HOH HOH A . I 8 HOH 61 361 272 HOH HOH A . I 8 HOH 62 362 273 HOH HOH A . I 8 HOH 63 363 274 HOH HOH A . I 8 HOH 64 364 275 HOH HOH A . I 8 HOH 65 365 276 HOH HOH A . I 8 HOH 66 366 277 HOH HOH A . I 8 HOH 67 367 278 HOH HOH A . I 8 HOH 68 368 279 HOH HOH A . I 8 HOH 69 369 280 HOH HOH A . I 8 HOH 70 370 281 HOH HOH A . I 8 HOH 71 371 282 HOH HOH A . I 8 HOH 72 372 283 HOH HOH A . I 8 HOH 73 373 284 HOH HOH A . I 8 HOH 74 374 285 HOH HOH A . I 8 HOH 75 375 286 HOH HOH A . I 8 HOH 76 376 287 HOH HOH A . I 8 HOH 77 377 288 HOH HOH A . I 8 HOH 78 378 289 HOH HOH A . I 8 HOH 79 379 290 HOH HOH A . I 8 HOH 80 380 291 HOH HOH A . I 8 HOH 81 381 292 HOH HOH A . I 8 HOH 82 382 293 HOH HOH A . I 8 HOH 83 383 294 HOH HOH A . I 8 HOH 84 384 295 HOH HOH A . I 8 HOH 85 385 296 HOH HOH A . I 8 HOH 86 386 297 HOH HOH A . I 8 HOH 87 387 298 HOH HOH A . I 8 HOH 88 388 299 HOH HOH A . I 8 HOH 89 389 300 HOH HOH A . I 8 HOH 90 390 301 HOH HOH A . I 8 HOH 91 391 302 HOH HOH A . I 8 HOH 92 392 304 HOH HOH A . I 8 HOH 93 393 305 HOH HOH A . I 8 HOH 94 394 306 HOH HOH A . I 8 HOH 95 395 307 HOH HOH A . I 8 HOH 96 396 308 HOH HOH A . I 8 HOH 97 397 309 HOH HOH A . I 8 HOH 98 398 310 HOH HOH A . I 8 HOH 99 399 311 HOH HOH A . I 8 HOH 100 400 312 HOH HOH A . I 8 HOH 101 401 313 HOH HOH A . I 8 HOH 102 402 314 HOH HOH A . I 8 HOH 103 403 315 HOH HOH A . I 8 HOH 104 404 316 HOH HOH A . I 8 HOH 105 405 317 HOH HOH A . I 8 HOH 106 406 318 HOH HOH A . I 8 HOH 107 407 319 HOH HOH A . I 8 HOH 108 408 320 HOH HOH A . I 8 HOH 109 409 321 HOH HOH A . I 8 HOH 110 410 322 HOH HOH A . I 8 HOH 111 411 323 HOH HOH A . I 8 HOH 112 412 324 HOH HOH A . I 8 HOH 113 413 325 HOH HOH A . I 8 HOH 114 414 326 HOH HOH A . I 8 HOH 115 415 327 HOH HOH A . I 8 HOH 116 416 328 HOH HOH A . I 8 HOH 117 417 329 HOH HOH A . I 8 HOH 118 418 330 HOH HOH A . I 8 HOH 119 419 331 HOH HOH A . I 8 HOH 120 420 332 HOH HOH A . I 8 HOH 121 421 333 HOH HOH A . I 8 HOH 122 422 334 HOH HOH A . I 8 HOH 123 423 335 HOH HOH A . I 8 HOH 124 424 336 HOH HOH A . I 8 HOH 125 425 337 HOH HOH A . I 8 HOH 126 426 338 HOH HOH A . I 8 HOH 127 427 339 HOH HOH A . I 8 HOH 128 428 340 HOH HOH A . I 8 HOH 129 429 341 HOH HOH A . I 8 HOH 130 430 342 HOH HOH A . I 8 HOH 131 431 343 HOH HOH A . I 8 HOH 132 432 344 HOH HOH A . I 8 HOH 133 433 345 HOH HOH A . I 8 HOH 134 434 346 HOH HOH A . I 8 HOH 135 435 348 HOH HOH A . I 8 HOH 136 436 349 HOH HOH A . I 8 HOH 137 437 350 HOH HOH A . I 8 HOH 138 438 351 HOH HOH A . I 8 HOH 139 439 352 HOH HOH A . I 8 HOH 140 440 353 HOH HOH A . I 8 HOH 141 441 354 HOH HOH A . I 8 HOH 142 442 355 HOH HOH A . I 8 HOH 143 443 356 HOH HOH A . I 8 HOH 144 444 357 HOH HOH A . I 8 HOH 145 445 358 HOH HOH A . I 8 HOH 146 446 359 HOH HOH A . I 8 HOH 147 447 360 HOH HOH A . I 8 HOH 148 448 361 HOH HOH A . I 8 HOH 149 449 362 HOH HOH A . I 8 HOH 150 450 363 HOH HOH A . I 8 HOH 151 451 364 HOH HOH A . I 8 HOH 152 452 365 HOH HOH A . I 8 HOH 153 453 366 HOH HOH A . I 8 HOH 154 454 367 HOH HOH A . I 8 HOH 155 455 368 HOH HOH A . I 8 HOH 156 456 369 HOH HOH A . I 8 HOH 157 457 370 HOH HOH A . I 8 HOH 158 458 371 HOH HOH A . I 8 HOH 159 459 372 HOH HOH A . I 8 HOH 160 460 373 HOH HOH A . I 8 HOH 161 461 374 HOH HOH A . I 8 HOH 162 462 375 HOH HOH A . I 8 HOH 163 463 376 HOH HOH A . I 8 HOH 164 464 377 HOH HOH A . I 8 HOH 165 465 378 HOH HOH A . I 8 HOH 166 466 379 HOH HOH A . I 8 HOH 167 467 380 HOH HOH A . I 8 HOH 168 468 381 HOH HOH A . I 8 HOH 169 469 382 HOH HOH A . I 8 HOH 170 470 383 HOH HOH A . I 8 HOH 171 471 384 HOH HOH A . I 8 HOH 172 472 385 HOH HOH A . I 8 HOH 173 473 386 HOH HOH A . I 8 HOH 174 474 387 HOH HOH A . I 8 HOH 175 475 396 HOH HOH A . I 8 HOH 176 476 397 HOH HOH A . I 8 HOH 177 477 398 HOH HOH A . I 8 HOH 178 478 399 HOH HOH A . I 8 HOH 179 479 400 HOH HOH A . I 8 HOH 180 480 402 HOH HOH A . I 8 HOH 181 481 405 HOH HOH A . I 8 HOH 182 482 406 HOH HOH A . I 8 HOH 183 483 408 HOH HOH A . I 8 HOH 184 484 410 HOH HOH A . I 8 HOH 185 485 411 HOH HOH A . I 8 HOH 186 486 412 HOH HOH A . I 8 HOH 187 487 414 HOH HOH A . I 8 HOH 188 488 415 HOH HOH A . I 8 HOH 189 489 416 HOH HOH A . I 8 HOH 190 490 417 HOH HOH A . I 8 HOH 191 491 418 HOH HOH A . I 8 HOH 192 492 419 HOH HOH A . I 8 HOH 193 493 420 HOH HOH A . I 8 HOH 194 494 422 HOH HOH A . I 8 HOH 195 495 423 HOH HOH A . I 8 HOH 196 496 425 HOH HOH A . I 8 HOH 197 497 426 HOH HOH A . I 8 HOH 198 498 427 HOH HOH A . I 8 HOH 199 499 428 HOH HOH A . I 8 HOH 200 500 429 HOH HOH A . I 8 HOH 201 501 430 HOH HOH A . I 8 HOH 202 502 431 HOH HOH A . I 8 HOH 203 503 432 HOH HOH A . I 8 HOH 204 504 433 HOH HOH A . I 8 HOH 205 505 434 HOH HOH A . I 8 HOH 206 506 436 HOH HOH A . I 8 HOH 207 507 437 HOH HOH A . I 8 HOH 208 508 438 HOH HOH A . I 8 HOH 209 509 439 HOH HOH A . I 8 HOH 210 510 440 HOH HOH A . I 8 HOH 211 511 444 HOH HOH A . I 8 HOH 212 512 445 HOH HOH A . I 8 HOH 213 513 447 HOH HOH A . I 8 HOH 214 514 448 HOH HOH A . I 8 HOH 215 515 449 HOH HOH A . I 8 HOH 216 516 450 HOH HOH A . I 8 HOH 217 517 452 HOH HOH A . I 8 HOH 218 518 457 HOH HOH A . I 8 HOH 219 519 458 HOH HOH A . I 8 HOH 220 520 459 HOH HOH A . I 8 HOH 221 521 460 HOH HOH A . I 8 HOH 222 522 461 HOH HOH A . I 8 HOH 223 523 462 HOH HOH A . I 8 HOH 224 524 464 HOH HOH A . I 8 HOH 225 525 468 HOH HOH A . I 8 HOH 226 526 469 HOH HOH A . I 8 HOH 227 527 471 HOH HOH A . I 8 HOH 228 528 472 HOH HOH A . I 8 HOH 229 529 473 HOH HOH A . I 8 HOH 230 530 478 HOH HOH A . I 8 HOH 231 531 479 HOH HOH A . I 8 HOH 232 532 480 HOH HOH A . I 8 HOH 233 533 482 HOH HOH A . I 8 HOH 234 534 483 HOH HOH A . I 8 HOH 235 535 485 HOH HOH A . I 8 HOH 236 536 489 HOH HOH A . I 8 HOH 237 537 490 HOH HOH A . I 8 HOH 238 538 491 HOH HOH A . I 8 HOH 239 539 499 HOH HOH A . I 8 HOH 240 540 500 HOH HOH A . I 8 HOH 241 541 503 HOH HOH A . I 8 HOH 242 542 505 HOH HOH A . I 8 HOH 243 543 506 HOH HOH A . I 8 HOH 244 544 507 HOH HOH A . I 8 HOH 245 545 511 HOH HOH A . I 8 HOH 246 546 513 HOH HOH A . I 8 HOH 247 547 518 HOH HOH A . I 8 HOH 248 548 519 HOH HOH A . I 8 HOH 249 549 520 HOH HOH A . I 8 HOH 250 550 522 HOH HOH A . I 8 HOH 251 551 523 HOH HOH A . I 8 HOH 252 552 524 HOH HOH A . I 8 HOH 253 553 525 HOH HOH A . I 8 HOH 254 554 528 HOH HOH A . I 8 HOH 255 555 529 HOH HOH A . I 8 HOH 256 556 530 HOH HOH A . I 8 HOH 257 557 532 HOH HOH A . I 8 HOH 258 558 533 HOH HOH A . I 8 HOH 259 559 534 HOH HOH A . I 8 HOH 260 560 535 HOH HOH A . I 8 HOH 261 561 536 HOH HOH A . I 8 HOH 262 562 539 HOH HOH A . I 8 HOH 263 563 540 HOH HOH A . I 8 HOH 264 564 541 HOH HOH A . J 8 HOH 1 201 391 HOH HOH B . J 8 HOH 2 202 392 HOH HOH B . J 8 HOH 3 203 395 HOH HOH B . J 8 HOH 4 204 401 HOH HOH B . J 8 HOH 5 205 404 HOH HOH B . J 8 HOH 6 206 466 HOH HOH B . K 8 HOH 1 201 388 HOH HOH C . K 8 HOH 2 202 389 HOH HOH C . K 8 HOH 3 203 390 HOH HOH C . K 8 HOH 4 204 393 HOH HOH C . K 8 HOH 5 205 403 HOH HOH C . K 8 HOH 6 206 537 HOH HOH C . L 8 HOH 1 201 470 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 240-meric 240 2 'icosahedral asymmetric unit' ? tetrameric 4 3 'icosahedral pentamer' ? eicosameric 20 4 'icosahedral 23 hexamer' ? 24-meric 24 5 'icosahedral asymmetric unit, std point frame' ? tetrameric 4 6 'crystal asymmetric unit, crystal frame' ? 60-meric 60 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A,B,C,D,E,F,G,H,I,J,K,L 2 1 A,B,C,D,E,F,G,H,I,J,K,L 3 '(1-5)' A,B,C,D,E,F,G,H,I,J,K,L 4 '(1,2,6,10,23,24)' A,B,C,D,E,F,G,H,I,J,K,L 5 P A,B,C,D,E,F,G,H,I,J,K,L 6 '(X0)(1-10,21-25)' A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.80901699 -0.50000000 0.30901699 0.00000 0.50000000 0.30901699 -0.80901699 0.00000 0.30901699 0.80901699 0.50000000 0.00000 X0 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.50000000 0.30901700 0.80901699 0.00000 0.30901700 0.80901699 -0.50000000 0.00000 -0.80901699 0.50000000 0.30901700 0.00000 3 'point symmetry operation' ? ? -0.30901700 0.80901700 0.50000000 0.00000 0.80901700 0.50000000 -0.30901699 0.00000 -0.50000000 0.30901700 -0.80901699 0.00000 4 'point symmetry operation' ? ? -0.30901699 0.80901700 -0.50000000 0.00000 0.80901699 0.50000000 0.30901700 0.00000 0.50000000 -0.30901700 -0.80901700 0.00000 5 'point symmetry operation' ? ? 0.50000000 0.30901699 -0.80901699 0.00000 0.30901699 0.80901700 0.50000000 0.00000 0.80901700 -0.50000000 0.30901699 0.00000 6 'point symmetry operation' ? ? -0.80901699 0.50000001 0.30901700 0.00000 0.49999999 0.30901699 0.80901700 0.00000 0.30901699 0.80901699 -0.50000000 0.00000 7 'point symmetry operation' ? ? -0.50000000 0.30901700 -0.80901699 0.00000 -0.30901700 0.80901699 0.50000000 0.00000 0.80901699 0.50000000 -0.30901700 0.00000 8 'point symmetry operation' ? ? 0.50000000 -0.30901699 -0.80901700 0.00000 -0.30901700 0.80901699 -0.50000000 0.00000 0.80901699 0.50000000 0.30901699 0.00000 9 'point symmetry operation' ? ? 0.80901700 -0.50000000 0.30901699 0.00000 0.50000000 0.30901699 -0.80901700 0.00000 0.30901699 0.80901699 0.50000000 0.00000 10 'point symmetry operation' ? ? 0.00000000 0.00000000 1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 11 'point symmetry operation' ? ? -0.50000000 0.30901699 -0.80901699 0.00000 0.30901700 -0.80901699 -0.50000001 0.00000 -0.80901700 -0.49999999 0.30901699 0.00000 12 'point symmetry operation' ? ? 0.50000000 -0.30901700 -0.80901699 0.00000 0.30901700 -0.80901699 0.50000000 0.00000 -0.80901699 -0.50000000 -0.30901700 0.00000 13 'point symmetry operation' ? ? 0.80901699 -0.50000000 0.30901699 0.00000 -0.50000000 -0.30901699 0.80901700 0.00000 -0.30901699 -0.80901700 -0.50000000 0.00000 14 'point symmetry operation' ? ? 0.00000000 0.00000000 1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 15 'point symmetry operation' ? ? -0.80901700 0.50000000 0.30901700 0.00000 -0.50000000 -0.30901699 -0.80901700 0.00000 -0.30901700 -0.80901699 0.50000000 0.00000 16 'point symmetry operation' ? ? 0.30901699 -0.80901700 0.49999999 0.00000 -0.80901699 -0.50000000 -0.30901699 0.00000 0.50000001 -0.30901700 -0.80901699 0.00000 17 'point symmetry operation' ? ? -0.50000000 -0.30901700 0.80901699 0.00000 -0.30901700 -0.80901699 -0.50000000 0.00000 0.80901699 -0.50000000 0.30901700 0.00000 18 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 19 'point symmetry operation' ? ? -0.50000000 -0.30901700 -0.80901699 0.00000 -0.30901699 -0.80901699 0.50000000 0.00000 -0.80901700 0.50000000 0.30901699 0.00000 20 'point symmetry operation' ? ? 0.30901699 -0.80901700 -0.50000000 0.00000 -0.80901699 -0.50000000 0.30901700 0.00000 -0.50000000 0.30901699 -0.80901699 0.00000 21 'point symmetry operation' ? ? 0.80901699 0.50000000 0.30901699 0.00000 0.50000001 -0.30901700 -0.80901699 0.00000 -0.30901699 0.80901700 -0.49999999 0.00000 22 'point symmetry operation' ? ? 0.30901700 0.80901699 0.50000000 0.00000 0.80901699 -0.50000000 0.30901700 0.00000 0.50000000 0.30901700 -0.80901699 0.00000 23 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 24 'point symmetry operation' ? ? 0.30901699 0.80901699 -0.50000000 0.00000 -0.80901700 0.50000000 0.30901699 0.00000 0.50000000 0.30901700 0.80901699 0.00000 25 'point symmetry operation' ? ? 0.80901699 0.50000000 -0.30901700 0.00000 -0.50000000 0.30901699 -0.80901699 0.00000 -0.30901699 0.80901700 0.50000000 0.00000 26 'point symmetry operation' ? ? -0.30901700 0.80901699 0.50000001 0.00000 -0.80901700 -0.49999999 0.30901699 0.00000 0.50000000 -0.30901699 0.80901699 0.00000 27 'point symmetry operation' ? ? -0.30901700 0.80901699 -0.50000000 0.00000 -0.80901699 -0.50000000 -0.30901700 0.00000 -0.50000000 0.30901700 0.80901699 0.00000 28 'point symmetry operation' ? ? 0.50000000 0.30901699 -0.80901700 0.00000 -0.30901699 -0.80901700 -0.50000000 0.00000 -0.80901699 0.50000000 -0.30901699 0.00000 29 'point symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 30 'point symmetry operation' ? ? 0.50000000 0.30901699 0.80901700 0.00000 -0.30901700 -0.80901699 0.50000000 0.00000 0.80901700 -0.50000000 -0.30901700 0.00000 31 'point symmetry operation' ? ? -0.49999999 -0.30901699 -0.80901700 0.00000 0.30901699 0.80901699 -0.50000000 0.00000 0.80901699 -0.50000001 -0.30901700 0.00000 32 'point symmetry operation' ? ? 0.30901700 -0.80901699 -0.50000000 0.00000 0.80901699 0.50000000 -0.30901700 0.00000 0.50000000 -0.30901700 0.80901699 0.00000 33 'point symmetry operation' ? ? 0.30901700 -0.80901699 0.50000000 0.00000 0.80901699 0.50000000 0.30901699 0.00000 -0.50000000 0.30901699 0.80901700 0.00000 34 'point symmetry operation' ? ? -0.50000000 -0.30901699 0.80901700 0.00000 0.30901699 0.80901699 0.50000000 0.00000 -0.80901700 0.50000000 -0.30901699 0.00000 35 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 36 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 37 'point symmetry operation' ? ? -0.30901700 -0.80901699 0.50000000 0.00000 -0.80901699 0.50000000 0.30901700 0.00000 -0.50000000 -0.30901700 -0.80901699 0.00000 38 'point symmetry operation' ? ? -0.80901700 -0.50000000 0.30901699 0.00000 -0.50000000 0.30901700 -0.80901699 0.00000 0.30901700 -0.80901700 -0.50000000 0.00000 39 'point symmetry operation' ? ? -0.80901699 -0.50000000 -0.30901700 0.00000 0.50000000 -0.30901700 -0.80901700 0.00000 0.30901699 -0.80901700 0.50000000 0.00000 40 'point symmetry operation' ? ? -0.30901699 -0.80901700 -0.50000000 0.00000 0.80901700 -0.50000000 0.30901699 0.00000 -0.50000000 -0.30901699 0.80901699 0.00000 41 'point symmetry operation' ? ? 0.80901700 0.49999999 -0.30901699 0.00000 0.50000000 -0.30901699 0.80901699 0.00000 0.30901700 -0.80901699 -0.50000001 0.00000 42 'point symmetry operation' ? ? 0.80901699 0.50000000 0.30901700 0.00000 -0.50000000 0.30901700 0.80901699 0.00000 0.30901700 -0.80901699 0.50000000 0.00000 43 'point symmetry operation' ? ? 0.30901699 0.80901700 0.50000000 0.00000 -0.80901699 0.50000000 -0.30901699 0.00000 -0.50000000 -0.30901699 0.80901700 0.00000 44 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 45 'point symmetry operation' ? ? 0.30901700 0.80901699 -0.50000000 0.00000 0.80901700 -0.50000000 -0.30901700 0.00000 -0.50000000 -0.30901699 -0.80901700 0.00000 46 'point symmetry operation' ? ? -0.50000001 0.30901700 0.80901699 0.00000 -0.30901699 0.80901700 -0.49999999 0.00000 -0.80901699 -0.50000000 -0.30901699 0.00000 47 'point symmetry operation' ? ? -0.80901699 0.50000000 -0.30901700 0.00000 0.50000000 0.30901700 -0.80901699 0.00000 -0.30901700 -0.80901699 -0.50000000 0.00000 48 'point symmetry operation' ? ? 0.00000000 0.00000000 -1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 -1.00000000 0.00000000 0.00000 49 'point symmetry operation' ? ? 0.80901700 -0.50000000 -0.30901699 0.00000 0.50000000 0.30901700 0.80901699 0.00000 -0.30901699 -0.80901699 0.50000000 0.00000 50 'point symmetry operation' ? ? 0.50000000 -0.30901699 0.80901699 0.00000 -0.30901699 0.80901700 0.50000000 0.00000 -0.80901699 -0.50000000 0.30901700 0.00000 51 'point symmetry operation' ? ? 0.00000000 0.00000000 -1.00000000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 52 'point symmetry operation' ? ? 0.80901699 -0.50000000 -0.30901700 0.00000 -0.50000000 -0.30901700 -0.80901699 0.00000 0.30901700 0.80901699 -0.50000000 0.00000 53 'point symmetry operation' ? ? 0.50000000 -0.30901700 0.80901699 0.00000 0.30901700 -0.80901700 -0.50000000 0.00000 0.80901700 0.50000000 -0.30901699 0.00000 54 'point symmetry operation' ? ? -0.50000000 0.30901700 0.80901700 0.00000 0.30901699 -0.80901700 0.50000000 0.00000 0.80901699 0.50000000 0.30901700 0.00000 55 'point symmetry operation' ? ? -0.80901700 0.50000000 -0.30901699 0.00000 -0.50000000 -0.30901699 0.80901699 0.00000 0.30901699 0.80901700 0.50000000 0.00000 56 'point symmetry operation' ? ? -0.30901699 -0.80901699 0.50000000 0.00000 0.80901699 -0.50000001 -0.30901700 0.00000 0.49999999 0.30901699 0.80901700 0.00000 57 'point symmetry operation' ? ? -0.80901699 -0.50000000 0.30901700 0.00000 0.50000000 -0.30901700 0.80901699 0.00000 -0.30901700 0.80901699 0.50000000 0.00000 58 'point symmetry operation' ? ? -0.80901699 -0.50000000 -0.30901699 0.00000 -0.50000000 0.30901699 0.80901700 0.00000 -0.30901700 0.80901699 -0.50000000 0.00000 59 'point symmetry operation' ? ? -0.30901699 -0.80901699 -0.50000000 0.00000 -0.80901700 0.50000000 -0.30901699 0.00000 0.50000000 0.30901699 -0.80901700 0.00000 60 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 0.00000 0.00000000 0.00000000 -1.00000000 0.00000 1.00000000 0.00000000 0.00000000 0.00000 # _pdbx_point_symmetry.entry_id 4OQ8 _pdbx_point_symmetry.Schoenflies_symbol I _pdbx_point_symmetry.circular_symmetry ? _pdbx_point_symmetry.H-M_notation ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-10 2 'Structure model' 1 1 2014-10-01 3 'Structure model' 1 2 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_oper_list.name' 4 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 5 3 'Structure model' '_pdbx_struct_oper_list.type' 6 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 Coot 'model building' 0.6.2 ? 2 CNS refinement 1.2 ? 3 d*TREK 'data reduction' . ? 4 d*TREK 'data scaling' . ? 5 CNS phasing 1.2 ? 6 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 89 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 73.99 _pdbx_validate_torsion.psi -5.56 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 D U 196 ? "C4'" ? D U 2 "C4'" 2 1 Y 1 D U 196 ? "O4'" ? D U 2 "O4'" 3 1 Y 1 D U 196 ? "C3'" ? D U 2 "C3'" 4 1 Y 1 D U 196 ? "O3'" ? D U 2 "O3'" 5 1 Y 1 D U 196 ? "C2'" ? D U 2 "C2'" 6 1 Y 1 D U 196 ? "O2'" ? D U 2 "O2'" 7 1 Y 1 D U 196 ? "C1'" ? D U 2 "C1'" 8 1 Y 1 D U 196 ? N1 ? D U 2 N1 9 1 Y 1 D U 196 ? C2 ? D U 2 C2 10 1 Y 1 D U 196 ? O2 ? D U 2 O2 11 1 Y 1 D U 196 ? N3 ? D U 2 N3 12 1 Y 1 D U 196 ? C4 ? D U 2 C4 13 1 Y 1 D U 196 ? O4 ? D U 2 O4 14 1 Y 1 D U 196 ? C5 ? D U 2 C5 15 1 Y 1 D U 196 ? C6 ? D U 2 C6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLY 2 ? A GLY 2 3 1 Y 1 A ARG 3 ? A ARG 3 4 1 Y 1 A GLY 4 ? A GLY 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A VAL 6 ? A VAL 6 7 1 Y 1 A LYS 7 ? A LYS 7 8 1 Y 1 A PRO 8 ? A PRO 8 9 1 Y 1 A ASN 9 ? A ASN 9 10 1 Y 1 A ARG 10 ? A ARG 10 11 1 Y 1 A LYS 11 ? A LYS 11 12 1 Y 1 A SER 12 ? A SER 12 13 1 Y 1 A THR 13 ? A THR 13 14 1 Y 1 A GLY 14 ? A GLY 14 15 1 Y 1 A ASP 15 ? A ASP 15 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 GLN N N N N 125 GLN CA C N S 126 GLN C C N N 127 GLN O O N N 128 GLN CB C N N 129 GLN CG C N N 130 GLN CD C N N 131 GLN OE1 O N N 132 GLN NE2 N N N 133 GLN OXT O N N 134 GLN H H N N 135 GLN H2 H N N 136 GLN HA H N N 137 GLN HB2 H N N 138 GLN HB3 H N N 139 GLN HG2 H N N 140 GLN HG3 H N N 141 GLN HE21 H N N 142 GLN HE22 H N N 143 GLN HXT H N N 144 GLU N N N N 145 GLU CA C N S 146 GLU C C N N 147 GLU O O N N 148 GLU CB C N N 149 GLU CG C N N 150 GLU CD C N N 151 GLU OE1 O N N 152 GLU OE2 O N N 153 GLU OXT O N N 154 GLU H H N N 155 GLU H2 H N N 156 GLU HA H N N 157 GLU HB2 H N N 158 GLU HB3 H N N 159 GLU HG2 H N N 160 GLU HG3 H N N 161 GLU HE2 H N N 162 GLU HXT H N N 163 GLY N N N N 164 GLY CA C N N 165 GLY C C N N 166 GLY O O N N 167 GLY OXT O N N 168 GLY H H N N 169 GLY H2 H N N 170 GLY HA2 H N N 171 GLY HA3 H N N 172 GLY HXT H N N 173 HOH O O N N 174 HOH H1 H N N 175 HOH H2 H N N 176 ILE N N N N 177 ILE CA C N S 178 ILE C C N N 179 ILE O O N N 180 ILE CB C N S 181 ILE CG1 C N N 182 ILE CG2 C N N 183 ILE CD1 C N N 184 ILE OXT O N N 185 ILE H H N N 186 ILE H2 H N N 187 ILE HA H N N 188 ILE HB H N N 189 ILE HG12 H N N 190 ILE HG13 H N N 191 ILE HG21 H N N 192 ILE HG22 H N N 193 ILE HG23 H N N 194 ILE HD11 H N N 195 ILE HD12 H N N 196 ILE HD13 H N N 197 ILE HXT H N N 198 LEU N N N N 199 LEU CA C N S 200 LEU C C N N 201 LEU O O N N 202 LEU CB C N N 203 LEU CG C N N 204 LEU CD1 C N N 205 LEU CD2 C N N 206 LEU OXT O N N 207 LEU H H N N 208 LEU H2 H N N 209 LEU HA H N N 210 LEU HB2 H N N 211 LEU HB3 H N N 212 LEU HG H N N 213 LEU HD11 H N N 214 LEU HD12 H N N 215 LEU HD13 H N N 216 LEU HD21 H N N 217 LEU HD22 H N N 218 LEU HD23 H N N 219 LEU HXT H N N 220 LYS N N N N 221 LYS CA C N S 222 LYS C C N N 223 LYS O O N N 224 LYS CB C N N 225 LYS CG C N N 226 LYS CD C N N 227 LYS CE C N N 228 LYS NZ N N N 229 LYS OXT O N N 230 LYS H H N N 231 LYS H2 H N N 232 LYS HA H N N 233 LYS HB2 H N N 234 LYS HB3 H N N 235 LYS HG2 H N N 236 LYS HG3 H N N 237 LYS HD2 H N N 238 LYS HD3 H N N 239 LYS HE2 H N N 240 LYS HE3 H N N 241 LYS HZ1 H N N 242 LYS HZ2 H N N 243 LYS HZ3 H N N 244 LYS HXT H N N 245 MET N N N N 246 MET CA C N S 247 MET C C N N 248 MET O O N N 249 MET CB C N N 250 MET CG C N N 251 MET SD S N N 252 MET CE C N N 253 MET OXT O N N 254 MET H H N N 255 MET H2 H N N 256 MET HA H N N 257 MET HB2 H N N 258 MET HB3 H N N 259 MET HG2 H N N 260 MET HG3 H N N 261 MET HE1 H N N 262 MET HE2 H N N 263 MET HE3 H N N 264 MET HXT H N N 265 MG MG MG N N 266 PHE N N N N 267 PHE CA C N S 268 PHE C C N N 269 PHE O O N N 270 PHE CB C N N 271 PHE CG C Y N 272 PHE CD1 C Y N 273 PHE CD2 C Y N 274 PHE CE1 C Y N 275 PHE CE2 C Y N 276 PHE CZ C Y N 277 PHE OXT O N N 278 PHE H H N N 279 PHE H2 H N N 280 PHE HA H N N 281 PHE HB2 H N N 282 PHE HB3 H N N 283 PHE HD1 H N N 284 PHE HD2 H N N 285 PHE HE1 H N N 286 PHE HE2 H N N 287 PHE HZ H N N 288 PHE HXT H N N 289 PO4 P P N N 290 PO4 O1 O N N 291 PO4 O2 O N N 292 PO4 O3 O N N 293 PO4 O4 O N N 294 PRO N N N N 295 PRO CA C N S 296 PRO C C N N 297 PRO O O N N 298 PRO CB C N N 299 PRO CG C N N 300 PRO CD C N N 301 PRO OXT O N N 302 PRO H H N N 303 PRO HA H N N 304 PRO HB2 H N N 305 PRO HB3 H N N 306 PRO HG2 H N N 307 PRO HG3 H N N 308 PRO HD2 H N N 309 PRO HD3 H N N 310 PRO HXT H N N 311 SER N N N N 312 SER CA C N S 313 SER C C N N 314 SER O O N N 315 SER CB C N N 316 SER OG O N N 317 SER OXT O N N 318 SER H H N N 319 SER H2 H N N 320 SER HA H N N 321 SER HB2 H N N 322 SER HB3 H N N 323 SER HG H N N 324 SER HXT H N N 325 SO4 S S N N 326 SO4 O1 O N N 327 SO4 O2 O N N 328 SO4 O3 O N N 329 SO4 O4 O N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 U OP3 O N N 399 U P P N N 400 U OP1 O N N 401 U OP2 O N N 402 U "O5'" O N N 403 U "C5'" C N N 404 U "C4'" C N R 405 U "O4'" O N N 406 U "C3'" C N S 407 U "O3'" O N N 408 U "C2'" C N R 409 U "O2'" O N N 410 U "C1'" C N R 411 U N1 N N N 412 U C2 C N N 413 U O2 O N N 414 U N3 N N N 415 U C4 C N N 416 U O4 O N N 417 U C5 C N N 418 U C6 C N N 419 U HOP3 H N N 420 U HOP2 H N N 421 U "H5'" H N N 422 U "H5''" H N N 423 U "H4'" H N N 424 U "H3'" H N N 425 U "HO3'" H N N 426 U "H2'" H N N 427 U "HO2'" H N N 428 U "H1'" H N N 429 U H3 H N N 430 U H5 H N N 431 U H6 H N N 432 VAL N N N N 433 VAL CA C N S 434 VAL C C N N 435 VAL O O N N 436 VAL CB C N N 437 VAL CG1 C N N 438 VAL CG2 C N N 439 VAL OXT O N N 440 VAL H H N N 441 VAL H2 H N N 442 VAL HA H N N 443 VAL HB H N N 444 VAL HG11 H N N 445 VAL HG12 H N N 446 VAL HG13 H N N 447 VAL HG21 H N N 448 VAL HG22 H N N 449 VAL HG23 H N N 450 VAL HXT H N N 451 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 GLN N CA sing N N 122 GLN N H sing N N 123 GLN N H2 sing N N 124 GLN CA C sing N N 125 GLN CA CB sing N N 126 GLN CA HA sing N N 127 GLN C O doub N N 128 GLN C OXT sing N N 129 GLN CB CG sing N N 130 GLN CB HB2 sing N N 131 GLN CB HB3 sing N N 132 GLN CG CD sing N N 133 GLN CG HG2 sing N N 134 GLN CG HG3 sing N N 135 GLN CD OE1 doub N N 136 GLN CD NE2 sing N N 137 GLN NE2 HE21 sing N N 138 GLN NE2 HE22 sing N N 139 GLN OXT HXT sing N N 140 GLU N CA sing N N 141 GLU N H sing N N 142 GLU N H2 sing N N 143 GLU CA C sing N N 144 GLU CA CB sing N N 145 GLU CA HA sing N N 146 GLU C O doub N N 147 GLU C OXT sing N N 148 GLU CB CG sing N N 149 GLU CB HB2 sing N N 150 GLU CB HB3 sing N N 151 GLU CG CD sing N N 152 GLU CG HG2 sing N N 153 GLU CG HG3 sing N N 154 GLU CD OE1 doub N N 155 GLU CD OE2 sing N N 156 GLU OE2 HE2 sing N N 157 GLU OXT HXT sing N N 158 GLY N CA sing N N 159 GLY N H sing N N 160 GLY N H2 sing N N 161 GLY CA C sing N N 162 GLY CA HA2 sing N N 163 GLY CA HA3 sing N N 164 GLY C O doub N N 165 GLY C OXT sing N N 166 GLY OXT HXT sing N N 167 HOH O H1 sing N N 168 HOH O H2 sing N N 169 ILE N CA sing N N 170 ILE N H sing N N 171 ILE N H2 sing N N 172 ILE CA C sing N N 173 ILE CA CB sing N N 174 ILE CA HA sing N N 175 ILE C O doub N N 176 ILE C OXT sing N N 177 ILE CB CG1 sing N N 178 ILE CB CG2 sing N N 179 ILE CB HB sing N N 180 ILE CG1 CD1 sing N N 181 ILE CG1 HG12 sing N N 182 ILE CG1 HG13 sing N N 183 ILE CG2 HG21 sing N N 184 ILE CG2 HG22 sing N N 185 ILE CG2 HG23 sing N N 186 ILE CD1 HD11 sing N N 187 ILE CD1 HD12 sing N N 188 ILE CD1 HD13 sing N N 189 ILE OXT HXT sing N N 190 LEU N CA sing N N 191 LEU N H sing N N 192 LEU N H2 sing N N 193 LEU CA C sing N N 194 LEU CA CB sing N N 195 LEU CA HA sing N N 196 LEU C O doub N N 197 LEU C OXT sing N N 198 LEU CB CG sing N N 199 LEU CB HB2 sing N N 200 LEU CB HB3 sing N N 201 LEU CG CD1 sing N N 202 LEU CG CD2 sing N N 203 LEU CG HG sing N N 204 LEU CD1 HD11 sing N N 205 LEU CD1 HD12 sing N N 206 LEU CD1 HD13 sing N N 207 LEU CD2 HD21 sing N N 208 LEU CD2 HD22 sing N N 209 LEU CD2 HD23 sing N N 210 LEU OXT HXT sing N N 211 LYS N CA sing N N 212 LYS N H sing N N 213 LYS N H2 sing N N 214 LYS CA C sing N N 215 LYS CA CB sing N N 216 LYS CA HA sing N N 217 LYS C O doub N N 218 LYS C OXT sing N N 219 LYS CB CG sing N N 220 LYS CB HB2 sing N N 221 LYS CB HB3 sing N N 222 LYS CG CD sing N N 223 LYS CG HG2 sing N N 224 LYS CG HG3 sing N N 225 LYS CD CE sing N N 226 LYS CD HD2 sing N N 227 LYS CD HD3 sing N N 228 LYS CE NZ sing N N 229 LYS CE HE2 sing N N 230 LYS CE HE3 sing N N 231 LYS NZ HZ1 sing N N 232 LYS NZ HZ2 sing N N 233 LYS NZ HZ3 sing N N 234 LYS OXT HXT sing N N 235 MET N CA sing N N 236 MET N H sing N N 237 MET N H2 sing N N 238 MET CA C sing N N 239 MET CA CB sing N N 240 MET CA HA sing N N 241 MET C O doub N N 242 MET C OXT sing N N 243 MET CB CG sing N N 244 MET CB HB2 sing N N 245 MET CB HB3 sing N N 246 MET CG SD sing N N 247 MET CG HG2 sing N N 248 MET CG HG3 sing N N 249 MET SD CE sing N N 250 MET CE HE1 sing N N 251 MET CE HE2 sing N N 252 MET CE HE3 sing N N 253 MET OXT HXT sing N N 254 PHE N CA sing N N 255 PHE N H sing N N 256 PHE N H2 sing N N 257 PHE CA C sing N N 258 PHE CA CB sing N N 259 PHE CA HA sing N N 260 PHE C O doub N N 261 PHE C OXT sing N N 262 PHE CB CG sing N N 263 PHE CB HB2 sing N N 264 PHE CB HB3 sing N N 265 PHE CG CD1 doub Y N 266 PHE CG CD2 sing Y N 267 PHE CD1 CE1 sing Y N 268 PHE CD1 HD1 sing N N 269 PHE CD2 CE2 doub Y N 270 PHE CD2 HD2 sing N N 271 PHE CE1 CZ doub Y N 272 PHE CE1 HE1 sing N N 273 PHE CE2 CZ sing Y N 274 PHE CE2 HE2 sing N N 275 PHE CZ HZ sing N N 276 PHE OXT HXT sing N N 277 PO4 P O1 doub N N 278 PO4 P O2 sing N N 279 PO4 P O3 sing N N 280 PO4 P O4 sing N N 281 PRO N CA sing N N 282 PRO N CD sing N N 283 PRO N H sing N N 284 PRO CA C sing N N 285 PRO CA CB sing N N 286 PRO CA HA sing N N 287 PRO C O doub N N 288 PRO C OXT sing N N 289 PRO CB CG sing N N 290 PRO CB HB2 sing N N 291 PRO CB HB3 sing N N 292 PRO CG CD sing N N 293 PRO CG HG2 sing N N 294 PRO CG HG3 sing N N 295 PRO CD HD2 sing N N 296 PRO CD HD3 sing N N 297 PRO OXT HXT sing N N 298 SER N CA sing N N 299 SER N H sing N N 300 SER N H2 sing N N 301 SER CA C sing N N 302 SER CA CB sing N N 303 SER CA HA sing N N 304 SER C O doub N N 305 SER C OXT sing N N 306 SER CB OG sing N N 307 SER CB HB2 sing N N 308 SER CB HB3 sing N N 309 SER OG HG sing N N 310 SER OXT HXT sing N N 311 SO4 S O1 doub N N 312 SO4 S O2 doub N N 313 SO4 S O3 sing N N 314 SO4 S O4 sing N N 315 THR N CA sing N N 316 THR N H sing N N 317 THR N H2 sing N N 318 THR CA C sing N N 319 THR CA CB sing N N 320 THR CA HA sing N N 321 THR C O doub N N 322 THR C OXT sing N N 323 THR CB OG1 sing N N 324 THR CB CG2 sing N N 325 THR CB HB sing N N 326 THR OG1 HG1 sing N N 327 THR CG2 HG21 sing N N 328 THR CG2 HG22 sing N N 329 THR CG2 HG23 sing N N 330 THR OXT HXT sing N N 331 TRP N CA sing N N 332 TRP N H sing N N 333 TRP N H2 sing N N 334 TRP CA C sing N N 335 TRP CA CB sing N N 336 TRP CA HA sing N N 337 TRP C O doub N N 338 TRP C OXT sing N N 339 TRP CB CG sing N N 340 TRP CB HB2 sing N N 341 TRP CB HB3 sing N N 342 TRP CG CD1 doub Y N 343 TRP CG CD2 sing Y N 344 TRP CD1 NE1 sing Y N 345 TRP CD1 HD1 sing N N 346 TRP CD2 CE2 doub Y N 347 TRP CD2 CE3 sing Y N 348 TRP NE1 CE2 sing Y N 349 TRP NE1 HE1 sing N N 350 TRP CE2 CZ2 sing Y N 351 TRP CE3 CZ3 doub Y N 352 TRP CE3 HE3 sing N N 353 TRP CZ2 CH2 doub Y N 354 TRP CZ2 HZ2 sing N N 355 TRP CZ3 CH2 sing Y N 356 TRP CZ3 HZ3 sing N N 357 TRP CH2 HH2 sing N N 358 TRP OXT HXT sing N N 359 TYR N CA sing N N 360 TYR N H sing N N 361 TYR N H2 sing N N 362 TYR CA C sing N N 363 TYR CA CB sing N N 364 TYR CA HA sing N N 365 TYR C O doub N N 366 TYR C OXT sing N N 367 TYR CB CG sing N N 368 TYR CB HB2 sing N N 369 TYR CB HB3 sing N N 370 TYR CG CD1 doub Y N 371 TYR CG CD2 sing Y N 372 TYR CD1 CE1 sing Y N 373 TYR CD1 HD1 sing N N 374 TYR CD2 CE2 doub Y N 375 TYR CD2 HD2 sing N N 376 TYR CE1 CZ doub Y N 377 TYR CE1 HE1 sing N N 378 TYR CE2 CZ sing Y N 379 TYR CE2 HE2 sing N N 380 TYR CZ OH sing N N 381 TYR OH HH sing N N 382 TYR OXT HXT sing N N 383 U OP3 P sing N N 384 U OP3 HOP3 sing N N 385 U P OP1 doub N N 386 U P OP2 sing N N 387 U P "O5'" sing N N 388 U OP2 HOP2 sing N N 389 U "O5'" "C5'" sing N N 390 U "C5'" "C4'" sing N N 391 U "C5'" "H5'" sing N N 392 U "C5'" "H5''" sing N N 393 U "C4'" "O4'" sing N N 394 U "C4'" "C3'" sing N N 395 U "C4'" "H4'" sing N N 396 U "O4'" "C1'" sing N N 397 U "C3'" "O3'" sing N N 398 U "C3'" "C2'" sing N N 399 U "C3'" "H3'" sing N N 400 U "O3'" "HO3'" sing N N 401 U "C2'" "O2'" sing N N 402 U "C2'" "C1'" sing N N 403 U "C2'" "H2'" sing N N 404 U "O2'" "HO2'" sing N N 405 U "C1'" N1 sing N N 406 U "C1'" "H1'" sing N N 407 U N1 C2 sing N N 408 U N1 C6 sing N N 409 U C2 O2 doub N N 410 U C2 N3 sing N N 411 U N3 C4 sing N N 412 U N3 H3 sing N N 413 U C4 O4 doub N N 414 U C4 C5 sing N N 415 U C5 C6 doub N N 416 U C5 H5 sing N N 417 U C6 H6 sing N N 418 VAL N CA sing N N 419 VAL N H sing N N 420 VAL N H2 sing N N 421 VAL CA C sing N N 422 VAL CA CB sing N N 423 VAL CA HA sing N N 424 VAL C O doub N N 425 VAL C OXT sing N N 426 VAL CB CG1 sing N N 427 VAL CB CG2 sing N N 428 VAL CB HB sing N N 429 VAL CG1 HG11 sing N N 430 VAL CG1 HG12 sing N N 431 VAL CG1 HG13 sing N N 432 VAL CG2 HG21 sing N N 433 VAL CG2 HG22 sing N N 434 VAL CG2 HG23 sing N N 435 VAL OXT HXT sing N N 436 # _ndb_struct_conf_na.entry_id 4OQ8 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B A 1 1_555 C U 9 1_555 -0.263 -0.560 -0.100 1.757 -9.573 -2.863 1 B_A161:U189_C B 161 ? C 189 ? 20 1 1 B A 2 1_555 C U 8 1_555 -1.008 -0.442 -0.470 7.274 -21.074 -4.732 2 B_A162:U188_C B 162 ? C 188 ? 20 1 1 B A 3 1_555 C U 7 1_555 -0.466 -0.247 -0.167 9.070 -10.097 -5.394 3 B_A163:U187_C B 163 ? C 187 ? 20 1 1 B A 4 1_555 C U 6 1_555 0.034 -0.207 -0.014 4.750 -8.026 -4.401 4 B_A164:U186_C B 164 ? C 186 ? 20 1 1 B A 5 1_555 C U 5 1_555 -0.012 -0.271 -0.204 -2.341 -16.232 -1.041 5 B_A165:U185_C B 165 ? C 185 ? 20 1 1 B A 6 1_555 C U 4 1_555 0.486 -0.301 -0.358 -8.704 -9.138 -7.784 6 B_A166:U184_C B 166 ? C 184 ? 20 1 1 B A 7 1_555 C U 3 1_555 1.320 -0.363 -0.145 -7.350 -5.148 -11.182 7 B_A167:U183_C B 167 ? C 183 ? 20 1 1 B A 8 1_555 C U 2 1_555 1.637 -0.483 -0.512 -14.716 -8.311 -9.658 8 B_A168:U182_C B 168 ? C 182 ? 20 1 1 B A 9 1_555 C U 1 1_555 0.392 -0.726 -0.580 -5.745 -11.777 -1.280 9 B_A169:U181_C B 169 ? C 181 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B A 1 1_555 C U 9 1_555 B A 2 1_555 C U 8 1_555 -0.472 -1.088 3.248 5.580 7.531 25.176 -4.156 2.358 2.654 16.563 -12.272 26.838 1 BB_A161A162:U188U189_CC B 161 ? C 189 ? B 162 ? C 188 ? 1 B A 2 1_555 C U 8 1_555 B A 3 1_555 C U 7 1_555 -0.240 -1.597 3.350 -8.542 8.137 29.886 -4.315 -1.061 2.793 15.060 15.810 32.081 2 BB_A162A163:U187U188_CC B 162 ? C 188 ? B 163 ? C 187 ? 1 B A 3 1_555 C U 7 1_555 B A 4 1_555 C U 6 1_555 -0.888 -1.948 3.388 -5.867 8.771 33.661 -4.504 0.607 2.914 14.703 9.835 35.230 3 BB_A163A164:U186U187_CC B 163 ? C 187 ? B 164 ? C 186 ? 1 B A 4 1_555 C U 6 1_555 B A 5 1_555 C U 5 1_555 -0.011 -1.658 3.379 0.446 13.484 35.636 -4.170 0.071 2.604 21.122 -0.698 38.027 4 BB_A164A165:U185U186_CC B 164 ? C 186 ? B 165 ? C 185 ? 1 B A 5 1_555 C U 5 1_555 B A 6 1_555 C U 4 1_555 -0.373 -1.612 3.464 1.044 13.103 37.860 -3.832 0.662 2.768 19.490 -1.553 39.998 5 BB_A165A166:U184U185_CC B 165 ? C 185 ? B 166 ? C 184 ? 1 B A 6 1_555 C U 4 1_555 B A 7 1_555 C U 3 1_555 0.551 -2.104 3.246 3.535 7.145 34.847 -4.399 -0.418 2.814 11.741 -5.810 35.719 6 BB_A166A167:U183U184_CC B 166 ? C 184 ? B 167 ? C 183 ? 1 B A 7 1_555 C U 3 1_555 B A 8 1_555 C U 2 1_555 0.006 -1.865 3.520 6.387 8.998 29.560 -5.107 1.175 2.788 16.911 -12.005 31.509 7 BB_A167A168:U182U183_CC B 167 ? C 183 ? B 168 ? C 182 ? 1 B A 8 1_555 C U 2 1_555 B A 9 1_555 C U 1 1_555 1.070 -1.747 3.306 5.252 6.717 25.132 -5.541 -0.977 2.909 14.900 -11.651 26.517 8 BB_A168A169:U181U182_CC B 168 ? C 182 ? B 169 ? C 181 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'PHOSPHATE ION' PO4 6 'SULFATE ION' SO4 7 'MAGNESIUM ION' MG 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1A34 _pdbx_initial_refinement_model.details 'PDB entry 1A34' #