data_4OSN # _entry.id 4OSN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.284 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4OSN RCSB RCSB084900 WWPDB D_1000084900 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4OSU 'Fab fragment in unbound form' unspecified PDB 4OT1 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4OSN _pdbx_database_status.recvd_initial_deposition_date 2014-02-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Diestel, U.' 1 'Muller, Y.A.' 2 # _citation.id primary _citation.title 'Crystal structure of engineered HCMV glycoprotein B Domain II' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Diestel, U.' 1 primary 'Muller, Y.A.' 2 # _cell.entry_id 4OSN _cell.length_a 89.922 _cell.length_b 89.922 _cell.length_c 75.654 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4OSN _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Envelope glycoprotein B' 14512.166 1 ? ? 'UNP residues 113-132, 344-438' 'ARTIFICIAL 4-RESIDUE LINKER AGSG BETWEEN RESIDUES 132 AND 344' 2 water nat water 18.015 74 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'gB, Glycoprotein GP55' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSPEFTSMKPINEDLDEGIMVVYKRNIAGSGCQLTFWEASERTIRSEAEDSYHFSSAKMTATFLSKKQEVNMSDSAL DCVRDEAINKLQQIFNTSYNQTYEKYGNVSVFETTGGLVVFWQGIKQKS ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSPEFTSMKPINEDLDEGIMVVYKRNIAGSGCQLTFWEASERTIRSEAEDSYHFSSAKMTATFLSKKQEVNMSDSAL DCVRDEAINKLQQIFNTSYNQTYEKYGNVSVFETTGGLVVFWQGIKQKS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 PRO n 1 7 GLU n 1 8 PHE n 1 9 THR n 1 10 SER n 1 11 MET n 1 12 LYS n 1 13 PRO n 1 14 ILE n 1 15 ASN n 1 16 GLU n 1 17 ASP n 1 18 LEU n 1 19 ASP n 1 20 GLU n 1 21 GLY n 1 22 ILE n 1 23 MET n 1 24 VAL n 1 25 VAL n 1 26 TYR n 1 27 LYS n 1 28 ARG n 1 29 ASN n 1 30 ILE n 1 31 ALA n 1 32 GLY n 1 33 SER n 1 34 GLY n 1 35 CYS n 1 36 GLN n 1 37 LEU n 1 38 THR n 1 39 PHE n 1 40 TRP n 1 41 GLU n 1 42 ALA n 1 43 SER n 1 44 GLU n 1 45 ARG n 1 46 THR n 1 47 ILE n 1 48 ARG n 1 49 SER n 1 50 GLU n 1 51 ALA n 1 52 GLU n 1 53 ASP n 1 54 SER n 1 55 TYR n 1 56 HIS n 1 57 PHE n 1 58 SER n 1 59 SER n 1 60 ALA n 1 61 LYS n 1 62 MET n 1 63 THR n 1 64 ALA n 1 65 THR n 1 66 PHE n 1 67 LEU n 1 68 SER n 1 69 LYS n 1 70 LYS n 1 71 GLN n 1 72 GLU n 1 73 VAL n 1 74 ASN n 1 75 MET n 1 76 SER n 1 77 ASP n 1 78 SER n 1 79 ALA n 1 80 LEU n 1 81 ASP n 1 82 CYS n 1 83 VAL n 1 84 ARG n 1 85 ASP n 1 86 GLU n 1 87 ALA n 1 88 ILE n 1 89 ASN n 1 90 LYS n 1 91 LEU n 1 92 GLN n 1 93 GLN n 1 94 ILE n 1 95 PHE n 1 96 ASN n 1 97 THR n 1 98 SER n 1 99 TYR n 1 100 ASN n 1 101 GLN n 1 102 THR n 1 103 TYR n 1 104 GLU n 1 105 LYS n 1 106 TYR n 1 107 GLY n 1 108 ASN n 1 109 VAL n 1 110 SER n 1 111 VAL n 1 112 PHE n 1 113 GLU n 1 114 THR n 1 115 THR n 1 116 GLY n 1 117 GLY n 1 118 LEU n 1 119 VAL n 1 120 VAL n 1 121 PHE n 1 122 TRP n 1 123 GLN n 1 124 GLY n 1 125 ILE n 1 126 LYS n 1 127 GLN n 1 128 LYS n 1 129 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 11 30 HHV-5 ? 'gB, UL55' ? Towne ? ? ? ? 'Human cytomegalovirus' 10363 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample ? 35 129 HHV-5 ? 'gB, UL55' ? Towne ? ? ? ? 'Human cytomegalovirus' 10363 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP GB_HCMVT P13201 1 MKPINEDLDEGIMVVYKRNI 113 ? 2 UNP GB_HCMVT P13201 1 ;CQLTFWEASERTIRSEAEDSYHFSSAKMTATFLSKKQEVNMSDSALDCVRDEAINKLQQIFNTSYNQTYEKYGNVSVFET TGGLVVFWQGIKQKS ; 344 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4OSN A 11 ? 30 ? P13201 113 ? 132 ? 114 200 2 2 4OSN A 35 ? 129 ? P13201 344 ? 438 ? 344 438 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4OSN GLY A 1 ? UNP P13201 ? ? 'EXPRESSION TAG' 104 1 1 4OSN PRO A 2 ? UNP P13201 ? ? 'EXPRESSION TAG' 105 2 1 4OSN LEU A 3 ? UNP P13201 ? ? 'EXPRESSION TAG' 106 3 1 4OSN GLY A 4 ? UNP P13201 ? ? 'EXPRESSION TAG' 107 4 1 4OSN SER A 5 ? UNP P13201 ? ? 'EXPRESSION TAG' 108 5 1 4OSN PRO A 6 ? UNP P13201 ? ? 'EXPRESSION TAG' 109 6 1 4OSN GLU A 7 ? UNP P13201 ? ? 'EXPRESSION TAG' 110 7 1 4OSN PHE A 8 ? UNP P13201 ? ? 'EXPRESSION TAG' 111 8 1 4OSN THR A 9 ? UNP P13201 ? ? 'EXPRESSION TAG' 112 9 1 4OSN SER A 10 ? UNP P13201 ? ? 'EXPRESSION TAG' 113 10 1 4OSN ALA A 31 ? UNP P13201 ? ? LINKER 201 11 1 4OSN GLY A 32 ? UNP P13201 ? ? LINKER 202 12 1 4OSN SER A 33 ? UNP P13201 ? ? LINKER 203 13 1 4OSN GLY A 34 ? UNP P13201 ? ? LINKER 204 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4OSN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.04 _exptl_crystal.density_percent_sol 59.57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 292.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.5M Lithium Sulfate, 0.1M Na-HEPES salt, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 292.15K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.pdbx_collection_date 2011-04-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91841 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4OSN _reflns.observed_criterion_sigma_I 3 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 34.03 _reflns.d_resolution_high 1.76 _reflns.number_obs 18070 _reflns.number_all ? _reflns.percent_possible_obs 98.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.76 _reflns_shell.d_res_low 1.81 _reflns_shell.percent_possible_all 97.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4OSN _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17163 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.03 _refine.ls_d_res_high 1.76 _refine.ls_percent_reflns_obs 98.05 _refine.ls_R_factor_obs 0.20337 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20206 _refine.ls_R_factor_R_free 0.22860 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 906 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.B_iso_mean 36.609 _refine.aniso_B[1][1] 0.53 _refine.aniso_B[2][2] 0.53 _refine.aniso_B[3][3] -1.72 _refine.aniso_B[1][2] 0.53 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.103 _refine.pdbx_overall_ESU_R_Free 0.101 _refine.overall_SU_ML 0.070 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.345 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 887 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 74 _refine_hist.number_atoms_total 961 _refine_hist.d_res_high 1.76 _refine_hist.d_res_low 34.03 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.020 ? 991 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.375 1.921 ? 1350 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.064 5.000 ? 130 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.620 25.192 ? 52 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.350 15.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.820 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.110 0.200 ? 146 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 763 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.093 1.414 ? 473 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.856 2.628 ? 596 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.691 1.654 ? 517 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined 7.670 7.764 ? 1542 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.760 _refine_ls_shell.d_res_low 1.806 _refine_ls_shell.number_reflns_R_work 1228 _refine_ls_shell.R_factor_R_work 0.268 _refine_ls_shell.percent_reflns_obs 97.22 _refine_ls_shell.R_factor_R_free 0.394 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4OSN _struct.title 'Crystal structure of engineered HCMV glycoprotein B Domain II' _struct.pdbx_descriptor 'Envelope glycoprotein B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4OSN _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'PH domain, antigenic domain, fusion protein, viral envelope, VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 77 ? ASP A 81 ? ASP A 386 ASP A 390 5 ? 5 HELX_P HELX_P2 2 VAL A 83 ? TYR A 99 ? VAL A 392 TYR A 408 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 35 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 82 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 344 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 391 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.055 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 66 ? SER A 68 ? PHE A 375 SER A 377 A 2 TYR A 55 ? SER A 58 ? TYR A 364 SER A 367 A 3 LEU A 37 ? GLU A 50 ? LEU A 346 GLU A 359 A 4 ASP A 17 ? ARG A 28 ? ASP A 120 ARG A 131 A 5 VAL A 119 ? LYS A 126 ? VAL A 428 LYS A 435 A 6 GLU A 104 ? GLU A 113 ? GLU A 413 GLU A 422 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 66 ? O PHE A 375 N PHE A 57 ? N PHE A 366 A 2 3 O SER A 58 ? O SER A 367 N ILE A 47 ? N ILE A 356 A 3 4 O GLU A 41 ? O GLU A 350 N VAL A 25 ? N VAL A 128 A 4 5 N VAL A 24 ? N VAL A 127 O PHE A 121 ? O PHE A 430 A 5 6 O VAL A 120 ? O VAL A 429 N PHE A 112 ? N PHE A 421 # _database_PDB_matrix.entry_id 4OSN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4OSN _atom_sites.fract_transf_matrix[1][1] 0.011121 _atom_sites.fract_transf_matrix[1][2] 0.006421 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012841 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013218 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 104 ? ? ? A . n A 1 2 PRO 2 105 ? ? ? A . n A 1 3 LEU 3 106 ? ? ? A . n A 1 4 GLY 4 107 ? ? ? A . n A 1 5 SER 5 108 ? ? ? A . n A 1 6 PRO 6 109 ? ? ? A . n A 1 7 GLU 7 110 ? ? ? A . n A 1 8 PHE 8 111 ? ? ? A . n A 1 9 THR 9 112 ? ? ? A . n A 1 10 SER 10 113 ? ? ? A . n A 1 11 MET 11 114 ? ? ? A . n A 1 12 LYS 12 115 ? ? ? A . n A 1 13 PRO 13 116 ? ? ? A . n A 1 14 ILE 14 117 ? ? ? A . n A 1 15 ASN 15 118 118 ASN ASN A . n A 1 16 GLU 16 119 119 GLU GLU A . n A 1 17 ASP 17 120 120 ASP ASP A . n A 1 18 LEU 18 121 121 LEU LEU A . n A 1 19 ASP 19 122 122 ASP ASP A . n A 1 20 GLU 20 123 123 GLU GLU A . n A 1 21 GLY 21 124 124 GLY GLY A . n A 1 22 ILE 22 125 125 ILE ILE A . n A 1 23 MET 23 126 126 MET MET A . n A 1 24 VAL 24 127 127 VAL VAL A . n A 1 25 VAL 25 128 128 VAL VAL A . n A 1 26 TYR 26 129 129 TYR TYR A . n A 1 27 LYS 27 130 130 LYS LYS A . n A 1 28 ARG 28 131 131 ARG ARG A . n A 1 29 ASN 29 132 132 ASN ASN A . n A 1 30 ILE 30 200 ? ? ? A . n A 1 31 ALA 31 201 ? ? ? A . n A 1 32 GLY 32 202 ? ? ? A . n A 1 33 SER 33 203 ? ? ? A . n A 1 34 GLY 34 204 204 GLY GLY A . n A 1 35 CYS 35 344 344 CYS CYS A . n A 1 36 GLN 36 345 345 GLN GLN A . n A 1 37 LEU 37 346 346 LEU LEU A . n A 1 38 THR 38 347 347 THR THR A . n A 1 39 PHE 39 348 348 PHE PHE A . n A 1 40 TRP 40 349 349 TRP TRP A . n A 1 41 GLU 41 350 350 GLU GLU A . n A 1 42 ALA 42 351 351 ALA ALA A . n A 1 43 SER 43 352 352 SER SER A . n A 1 44 GLU 44 353 353 GLU GLU A . n A 1 45 ARG 45 354 354 ARG ARG A . n A 1 46 THR 46 355 355 THR THR A . n A 1 47 ILE 47 356 356 ILE ILE A . n A 1 48 ARG 48 357 357 ARG ARG A . n A 1 49 SER 49 358 358 SER SER A . n A 1 50 GLU 50 359 359 GLU GLU A . n A 1 51 ALA 51 360 360 ALA ALA A . n A 1 52 GLU 52 361 361 GLU GLU A . n A 1 53 ASP 53 362 362 ASP ASP A . n A 1 54 SER 54 363 363 SER SER A . n A 1 55 TYR 55 364 364 TYR TYR A . n A 1 56 HIS 56 365 365 HIS HIS A . n A 1 57 PHE 57 366 366 PHE PHE A . n A 1 58 SER 58 367 367 SER SER A . n A 1 59 SER 59 368 368 SER SER A . n A 1 60 ALA 60 369 369 ALA ALA A . n A 1 61 LYS 61 370 370 LYS LYS A . n A 1 62 MET 62 371 371 MET MET A . n A 1 63 THR 63 372 372 THR THR A . n A 1 64 ALA 64 373 373 ALA ALA A . n A 1 65 THR 65 374 374 THR THR A . n A 1 66 PHE 66 375 375 PHE PHE A . n A 1 67 LEU 67 376 376 LEU LEU A . n A 1 68 SER 68 377 377 SER SER A . n A 1 69 LYS 69 378 378 LYS LYS A . n A 1 70 LYS 70 379 379 LYS LYS A . n A 1 71 GLN 71 380 380 GLN GLN A . n A 1 72 GLU 72 381 381 GLU GLU A . n A 1 73 VAL 73 382 382 VAL VAL A . n A 1 74 ASN 74 383 383 ASN ASN A . n A 1 75 MET 75 384 384 MET MET A . n A 1 76 SER 76 385 385 SER SER A . n A 1 77 ASP 77 386 386 ASP ASP A . n A 1 78 SER 78 387 387 SER SER A . n A 1 79 ALA 79 388 388 ALA ALA A . n A 1 80 LEU 80 389 389 LEU LEU A . n A 1 81 ASP 81 390 390 ASP ASP A . n A 1 82 CYS 82 391 391 CYS CYS A . n A 1 83 VAL 83 392 392 VAL VAL A . n A 1 84 ARG 84 393 393 ARG ARG A . n A 1 85 ASP 85 394 394 ASP ASP A . n A 1 86 GLU 86 395 395 GLU GLU A . n A 1 87 ALA 87 396 396 ALA ALA A . n A 1 88 ILE 88 397 397 ILE ILE A . n A 1 89 ASN 89 398 398 ASN ASN A . n A 1 90 LYS 90 399 399 LYS LYS A . n A 1 91 LEU 91 400 400 LEU LEU A . n A 1 92 GLN 92 401 401 GLN GLN A . n A 1 93 GLN 93 402 402 GLN GLN A . n A 1 94 ILE 94 403 403 ILE ILE A . n A 1 95 PHE 95 404 404 PHE PHE A . n A 1 96 ASN 96 405 405 ASN ASN A . n A 1 97 THR 97 406 406 THR THR A . n A 1 98 SER 98 407 407 SER SER A . n A 1 99 TYR 99 408 408 TYR TYR A . n A 1 100 ASN 100 409 409 ASN ASN A . n A 1 101 GLN 101 410 410 GLN GLN A . n A 1 102 THR 102 411 411 THR THR A . n A 1 103 TYR 103 412 412 TYR TYR A . n A 1 104 GLU 104 413 413 GLU GLU A . n A 1 105 LYS 105 414 414 LYS LYS A . n A 1 106 TYR 106 415 415 TYR TYR A . n A 1 107 GLY 107 416 416 GLY GLY A . n A 1 108 ASN 108 417 417 ASN ASN A . n A 1 109 VAL 109 418 418 VAL VAL A . n A 1 110 SER 110 419 419 SER SER A . n A 1 111 VAL 111 420 420 VAL VAL A . n A 1 112 PHE 112 421 421 PHE PHE A . n A 1 113 GLU 113 422 422 GLU GLU A . n A 1 114 THR 114 423 423 THR THR A . n A 1 115 THR 115 424 424 THR THR A . n A 1 116 GLY 116 425 425 GLY GLY A . n A 1 117 GLY 117 426 426 GLY GLY A . n A 1 118 LEU 118 427 427 LEU LEU A . n A 1 119 VAL 119 428 428 VAL VAL A . n A 1 120 VAL 120 429 429 VAL VAL A . n A 1 121 PHE 121 430 430 PHE PHE A . n A 1 122 TRP 122 431 431 TRP TRP A . n A 1 123 GLN 123 432 432 GLN GLN A . n A 1 124 GLY 124 433 433 GLY GLY A . n A 1 125 ILE 125 434 434 ILE ILE A . n A 1 126 LYS 126 435 435 LYS LYS A . n A 1 127 GLN 127 436 436 GLN GLN A . n A 1 128 LYS 128 437 437 LYS LYS A . n A 1 129 SER 129 438 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 501 1 HOH HOH A . B 2 HOH 2 502 2 HOH HOH A . B 2 HOH 3 503 3 HOH HOH A . B 2 HOH 4 504 4 HOH HOH A . B 2 HOH 5 505 5 HOH HOH A . B 2 HOH 6 506 6 HOH HOH A . B 2 HOH 7 507 7 HOH HOH A . B 2 HOH 8 508 8 HOH HOH A . B 2 HOH 9 509 9 HOH HOH A . B 2 HOH 10 510 10 HOH HOH A . B 2 HOH 11 511 11 HOH HOH A . B 2 HOH 12 512 12 HOH HOH A . B 2 HOH 13 513 13 HOH HOH A . B 2 HOH 14 514 14 HOH HOH A . B 2 HOH 15 515 15 HOH HOH A . B 2 HOH 16 516 16 HOH HOH A . B 2 HOH 17 517 17 HOH HOH A . B 2 HOH 18 518 18 HOH HOH A . B 2 HOH 19 519 19 HOH HOH A . B 2 HOH 20 520 20 HOH HOH A . B 2 HOH 21 521 21 HOH HOH A . B 2 HOH 22 522 22 HOH HOH A . B 2 HOH 23 523 23 HOH HOH A . B 2 HOH 24 524 24 HOH HOH A . B 2 HOH 25 525 25 HOH HOH A . B 2 HOH 26 526 26 HOH HOH A . B 2 HOH 27 527 27 HOH HOH A . B 2 HOH 28 528 28 HOH HOH A . B 2 HOH 29 529 29 HOH HOH A . B 2 HOH 30 530 30 HOH HOH A . B 2 HOH 31 531 31 HOH HOH A . B 2 HOH 32 532 32 HOH HOH A . B 2 HOH 33 533 33 HOH HOH A . B 2 HOH 34 534 34 HOH HOH A . B 2 HOH 35 535 35 HOH HOH A . B 2 HOH 36 536 36 HOH HOH A . B 2 HOH 37 537 37 HOH HOH A . B 2 HOH 38 538 38 HOH HOH A . B 2 HOH 39 539 39 HOH HOH A . B 2 HOH 40 540 40 HOH HOH A . B 2 HOH 41 541 41 HOH HOH A . B 2 HOH 42 542 42 HOH HOH A . B 2 HOH 43 543 43 HOH HOH A . B 2 HOH 44 544 44 HOH HOH A . B 2 HOH 45 545 45 HOH HOH A . B 2 HOH 46 546 46 HOH HOH A . B 2 HOH 47 547 47 HOH HOH A . B 2 HOH 48 548 48 HOH HOH A . B 2 HOH 49 549 49 HOH HOH A . B 2 HOH 50 550 50 HOH HOH A . B 2 HOH 51 551 51 HOH HOH A . B 2 HOH 52 552 52 HOH HOH A . B 2 HOH 53 553 53 HOH HOH A . B 2 HOH 54 554 54 HOH HOH A . B 2 HOH 55 555 55 HOH HOH A . B 2 HOH 56 556 56 HOH HOH A . B 2 HOH 57 557 57 HOH HOH A . B 2 HOH 58 558 59 HOH HOH A . B 2 HOH 59 559 60 HOH HOH A . B 2 HOH 60 560 61 HOH HOH A . B 2 HOH 61 561 63 HOH HOH A . B 2 HOH 62 562 64 HOH HOH A . B 2 HOH 63 563 65 HOH HOH A . B 2 HOH 64 564 66 HOH HOH A . B 2 HOH 65 565 67 HOH HOH A . B 2 HOH 66 566 68 HOH HOH A . B 2 HOH 67 567 69 HOH HOH A . B 2 HOH 68 568 70 HOH HOH A . B 2 HOH 69 569 71 HOH HOH A . B 2 HOH 70 570 72 HOH HOH A . B 2 HOH 71 571 73 HOH HOH A . B 2 HOH 72 572 74 HOH HOH A . B 2 HOH 73 573 75 HOH HOH A . B 2 HOH 74 574 76 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 501 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-08-13 2 'Structure model' 1 1 2017-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 2 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' entity_src_gen 2 2 'Structure model' software # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -41.6640 14.1080 2.6880 0.3069 0.1210 0.1117 -0.0081 -0.0272 0.0343 8.0616 5.1136 4.5975 1.2835 -3.2187 -1.3747 -0.2528 0.0231 0.2297 -0.6001 -0.1548 0.0281 0.6138 -0.1466 0.3847 'X-RAY DIFFRACTION' 2 ? refined -43.8690 16.2110 1.6470 0.3308 0.1078 0.1080 -0.0104 0.0330 0.0198 5.4375 3.7313 2.4269 1.1371 -0.5096 -1.0873 -0.3583 0.1891 0.1692 -0.3056 0.0332 0.2002 0.6155 -0.3353 0.2308 'X-RAY DIFFRACTION' 3 ? refined -36.7810 17.1250 5.5790 0.3608 0.1859 0.1037 -0.1543 -0.0646 0.0131 2.1985 7.7629 9.2851 -2.0739 3.2419 -7.5090 0.2498 -0.3959 0.1461 -0.1658 0.0689 -0.1124 0.9835 -0.5236 0.4195 'X-RAY DIFFRACTION' 4 ? refined -46.5540 7.1460 -4.2660 0.1787 0.0607 0.1173 -0.0168 -0.0031 0.0099 2.1267 3.7057 2.5946 0.0915 0.0464 -1.6673 -0.1481 0.1905 -0.0424 0.0318 -0.0402 0.3654 0.0994 -0.1307 0.0548 'X-RAY DIFFRACTION' 5 ? refined -40.4700 10.6310 0.9950 0.2644 0.1006 0.0955 -0.0280 -0.0006 0.0304 3.7637 2.8263 5.9101 1.1178 0.0823 0.4092 0.0714 -0.0706 -0.0007 -0.1290 -0.0133 -0.0422 0.2967 -0.3089 0.3231 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 118 A 344 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 345 A 360 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 361 A 381 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 382 A 417 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 418 A 437 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal mx 'data collection' CuBE ? 1 PHASER phasing . ? 2 REFMAC refinement 5.7.0032 ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 349 ? A -106.96 -71.33 2 1 GLN A 436 ? ? -76.82 37.91 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 GLY _pdbx_validate_polymer_linkage.auth_seq_id_1 204 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 CYS _pdbx_validate_polymer_linkage.auth_seq_id_2 344 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 3.44 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 104 ? A GLY 1 2 1 Y 1 A PRO 105 ? A PRO 2 3 1 Y 1 A LEU 106 ? A LEU 3 4 1 Y 1 A GLY 107 ? A GLY 4 5 1 Y 1 A SER 108 ? A SER 5 6 1 Y 1 A PRO 109 ? A PRO 6 7 1 Y 1 A GLU 110 ? A GLU 7 8 1 Y 1 A PHE 111 ? A PHE 8 9 1 Y 1 A THR 112 ? A THR 9 10 1 Y 1 A SER 113 ? A SER 10 11 1 Y 1 A MET 114 ? A MET 11 12 1 Y 1 A LYS 115 ? A LYS 12 13 1 Y 1 A PRO 116 ? A PRO 13 14 1 Y 1 A ILE 117 ? A ILE 14 15 1 Y 1 A ILE 200 ? A ILE 30 16 1 Y 1 A ALA 201 ? A ALA 31 17 1 Y 1 A GLY 202 ? A GLY 32 18 1 Y 1 A SER 203 ? A SER 33 19 1 Y 1 A SER 438 ? A SER 129 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #