HEADER DNA BINDING PROTEIN/DNA 13-FEB-14 4OT0 TITLE CRYSTAL STRUCTURE OF THE S505T MUTANT OF TAL EFFECTOR DHAX3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HAX3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 231-720; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'- COMPND 9 D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'); COMPND 10 CHAIN: G, I; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'- COMPND 14 D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'); COMPND 15 CHAIN: H, J; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS CAMPESTRIS PV. ARMORACIAE; SOURCE 3 ORGANISM_TAXID: 329463; SOURCE 4 GENE: HAX3; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES KEYWDS DNA BINDING PROTEIN, DNA, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.DENG,J.P.WU,C.Y.YAN,X.J.PAN,N.YAN REVDAT 2 08-NOV-23 4OT0 1 SEQADV REVDAT 1 28-MAY-14 4OT0 0 JRNL AUTH D.DENG,C.Y.YAN,J.P.WU,X.J.PAN,N.YAN JRNL TITL REVISITING THE TALE REPEAT JRNL REF PROTEIN CELL V. 5 297 2014 JRNL REFN ISSN 1674-800X JRNL PMID 24622844 JRNL DOI 10.1007/S13238-014-0035-2 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 41335 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.1458 - 6.1312 1.00 2724 134 0.1734 0.2202 REMARK 3 2 6.1312 - 4.8714 1.00 2666 138 0.1911 0.2128 REMARK 3 3 4.8714 - 4.2571 1.00 2639 141 0.1552 0.2186 REMARK 3 4 4.2571 - 3.8685 1.00 2640 162 0.1623 0.1958 REMARK 3 5 3.8685 - 3.5916 1.00 2608 175 0.1722 0.2216 REMARK 3 6 3.5916 - 3.3801 1.00 2630 130 0.1902 0.2453 REMARK 3 7 3.3801 - 3.2109 1.00 2641 139 0.2270 0.3059 REMARK 3 8 3.2109 - 3.0713 1.00 2666 130 0.2329 0.2857 REMARK 3 9 3.0713 - 2.9531 1.00 2612 128 0.2492 0.3614 REMARK 3 10 2.9531 - 2.8513 1.00 2661 125 0.2643 0.3272 REMARK 3 11 2.8513 - 2.7621 1.00 2598 139 0.2612 0.3457 REMARK 3 12 2.7621 - 2.6832 0.99 2610 138 0.2556 0.3203 REMARK 3 13 2.6832 - 2.6126 0.99 2618 126 0.2751 0.3300 REMARK 3 14 2.6126 - 2.5489 0.99 2598 146 0.2828 0.3385 REMARK 3 15 2.5489 - 2.4910 0.89 2342 131 0.2915 0.3500 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.11 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 24.57 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.65120 REMARK 3 B22 (A**2) : 5.17270 REMARK 3 B33 (A**2) : 5.20800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -14.47070 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 8831 REMARK 3 ANGLE : 1.251 12331 REMARK 3 CHIRALITY : 0.071 1499 REMARK 3 PLANARITY : 0.005 1396 REMARK 3 DIHEDRAL : 20.291 3319 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -3.6649 14.2957 24.2701 REMARK 3 T TENSOR REMARK 3 T11: 0.1926 T22: 0.1716 REMARK 3 T33: 0.1947 T12: 0.0239 REMARK 3 T13: 0.0115 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.2890 L22: 0.1858 REMARK 3 L33: 0.3602 L12: 0.1082 REMARK 3 L13: 0.1950 L23: 0.0851 REMARK 3 S TENSOR REMARK 3 S11: 0.0159 S12: -0.0161 S13: 0.0036 REMARK 3 S21: 0.0041 S22: 0.0163 S23: 0.0139 REMARK 3 S31: -0.0278 S32: -0.0362 S33: -0.0300 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OT0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000084913. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41335 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.491 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3V6T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10%-15% PEG 3350, 12% ETHANOL, 0.1M REMARK 280 MES, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.50850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 230 REMARK 465 HIS A 724 REMARK 465 HIS A 725 REMARK 465 HIS A 726 REMARK 465 HIS A 727 REMARK 465 HIS A 728 REMARK 465 MET B 230 REMARK 465 PRO B 693 REMARK 465 ALA B 694 REMARK 465 LEU B 695 REMARK 465 ALA B 696 REMARK 465 HIS B 724 REMARK 465 HIS B 725 REMARK 465 HIS B 726 REMARK 465 HIS B 727 REMARK 465 HIS B 728 REMARK 465 DT G 14 REMARK 465 DA H -14 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 236 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 249 CG CD NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN B 326 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG B 266 O HOH B 848 1.76 REMARK 500 O GLY B 539 O HOH B 823 1.89 REMARK 500 OD2 ASP B 701 O HOH B 853 1.92 REMARK 500 O HOH A 803 O HOH A 834 2.03 REMARK 500 O GLU A 598 O HOH A 849 2.03 REMARK 500 O ILE A 501 O HOH A 825 2.10 REMARK 500 O HOH A 804 O HOH A 808 2.15 REMARK 500 OP2 DG H -2 O HOH H 101 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 HIS B 491 O2 DT I 4 2546 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT G 0 N3 - C4 - O4 ANGL. DEV. = 3.6 DEGREES REMARK 500 DC G 2 C1' - O4' - C4' ANGL. DEV. = -6.9 DEGREES REMARK 500 DC G 3 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DC G 9 O4' - C1' - N1 ANGL. DEV. = -4.7 DEGREES REMARK 500 DT G 12 O4' - C1' - N1 ANGL. DEV. = -4.9 DEGREES REMARK 500 DC G 13 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG H -13 C3' - C2' - C1' ANGL. DEV. = -5.5 DEGREES REMARK 500 DG H -9 O4' - C1' - N9 ANGL. DEV. = 4.9 DEGREES REMARK 500 DT H -7 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT H -7 N3 - C4 - O4 ANGL. DEV. = 3.6 DEGREES REMARK 500 DA H -6 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DA H -4 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG H -2 C3' - C2' - C1' ANGL. DEV. = -5.2 DEGREES REMARK 500 DA H 0 O4' - C1' - N9 ANGL. DEV. = -5.7 DEGREES REMARK 500 DC H 1 C1' - O4' - C4' ANGL. DEV. = -6.0 DEGREES REMARK 500 DC H 1 O4' - C1' - C2' ANGL. DEV. = -5.8 DEGREES REMARK 500 DC H 1 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 DC I 13 C4' - C3' - C2' ANGL. DEV. = -5.3 DEGREES REMARK 500 DC I 13 O4' - C1' - N1 ANGL. DEV. = 9.2 DEGREES REMARK 500 DA J -4 C1' - O4' - C4' ANGL. DEV. = -6.7 DEGREES REMARK 500 DG J -2 O4' - C1' - N9 ANGL. DEV. = 3.9 DEGREES REMARK 500 DA J 0 O4' - C1' - N9 ANGL. DEV. = -4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 367 44.30 -90.36 REMARK 500 SER A 469 36.10 -82.90 REMARK 500 CYS A 488 -70.90 -59.08 REMARK 500 SER A 503 33.79 -89.08 REMARK 500 SER A 537 47.85 -88.30 REMARK 500 SER A 571 45.50 -92.16 REMARK 500 SER A 639 45.26 -90.29 REMARK 500 LEU B 248 37.92 -86.48 REMARK 500 SER B 299 55.98 -91.03 REMARK 500 SER B 333 44.87 -86.59 REMARK 500 SER B 367 45.38 -94.08 REMARK 500 SER B 401 46.30 -79.13 REMARK 500 PRO B 417 3.69 -68.15 REMARK 500 HIS B 423 -103.23 -121.62 REMARK 500 ASN B 436 -155.76 -97.50 REMARK 500 GLN B 455 -90.58 -94.14 REMARK 500 SER B 469 42.30 -91.58 REMARK 500 ALA B 490 134.19 -39.16 REMARK 500 SER B 537 32.75 -81.76 REMARK 500 SER B 571 49.45 -87.54 REMARK 500 SER B 605 44.85 -82.40 REMARK 500 SER B 639 30.89 -86.84 REMARK 500 ARG B 690 71.42 -170.07 REMARK 500 LYS B 720 43.15 -90.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OSH RELATED DB: PDB REMARK 900 RELATED ID: 4OSI RELATED DB: PDB REMARK 900 RELATED ID: 4OSJ RELATED DB: PDB REMARK 900 RELATED ID: 4OSK RELATED DB: PDB REMARK 900 RELATED ID: 4OSL RELATED DB: PDB REMARK 900 RELATED ID: 4OSM RELATED DB: PDB REMARK 900 RELATED ID: 4OSQ RELATED DB: PDB REMARK 900 RELATED ID: 4OSR RELATED DB: PDB REMARK 900 RELATED ID: 4OSS RELATED DB: PDB REMARK 900 RELATED ID: 4OST RELATED DB: PDB REMARK 900 RELATED ID: 4OSV RELATED DB: PDB REMARK 900 RELATED ID: 4OSW RELATED DB: PDB REMARK 900 RELATED ID: 4OSZ RELATED DB: PDB REMARK 900 RELATED ID: 4OT3 RELATED DB: PDB REMARK 900 RELATED ID: 4OTO RELATED DB: PDB DBREF 4OT0 A 231 720 UNP Q3ZD72 Q3ZD72_XANCA 231 720 DBREF 4OT0 B 231 720 UNP Q3ZD72 Q3ZD72_XANCA 231 720 DBREF 4OT0 G -2 14 PDB 4OT0 4OT0 -2 14 DBREF 4OT0 I -2 14 PDB 4OT0 4OT0 -2 14 DBREF 4OT0 H -14 2 PDB 4OT0 4OT0 -14 2 DBREF 4OT0 J -14 2 PDB 4OT0 4OT0 -14 2 SEQADV 4OT0 MET A 230 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS A 300 UNP Q3ZD72 ASN 300 ENGINEERED MUTATION SEQADV 4OT0 ASP A 301 UNP Q3ZD72 ILE 301 ENGINEERED MUTATION SEQADV 4OT0 HIS A 368 UNP Q3ZD72 ASN 368 ENGINEERED MUTATION SEQADV 4OT0 ASP A 369 UNP Q3ZD72 ILE 369 ENGINEERED MUTATION SEQADV 4OT0 ASN A 402 UNP Q3ZD72 HIS 402 ENGINEERED MUTATION SEQADV 4OT0 GLY A 403 UNP Q3ZD72 ASP 403 ENGINEERED MUTATION SEQADV 4OT0 ASN A 436 UNP Q3ZD72 HIS 436 ENGINEERED MUTATION SEQADV 4OT0 GLY A 437 UNP Q3ZD72 ASP 437 ENGINEERED MUTATION SEQADV 4OT0 ASN A 470 UNP Q3ZD72 HIS 470 ENGINEERED MUTATION SEQADV 4OT0 GLY A 471 UNP Q3ZD72 ASP 471 ENGINEERED MUTATION SEQADV 4OT0 THR A 505 UNP Q3ZD72 SER 505 ENGINEERED MUTATION SEQADV 4OT0 GLY A 539 UNP Q3ZD72 SER 539 ENGINEERED MUTATION SEQADV 4OT0 HIS A 572 UNP Q3ZD72 ASN 572 ENGINEERED MUTATION SEQADV 4OT0 ASP A 573 UNP Q3ZD72 SER 573 ENGINEERED MUTATION SEQADV 4OT0 ASN A 606 UNP Q3ZD72 HIS 606 ENGINEERED MUTATION SEQADV 4OT0 GLY A 607 UNP Q3ZD72 ASP 607 ENGINEERED MUTATION SEQADV 4OT0 HIS A 640 UNP Q3ZD72 ASN 640 ENGINEERED MUTATION SEQADV 4OT0 ASP A 641 UNP Q3ZD72 ILE 641 ENGINEERED MUTATION SEQADV 4OT0 LEU A 721 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 GLU A 722 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS A 723 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS A 724 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS A 725 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS A 726 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS A 727 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS A 728 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 MET B 230 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS B 300 UNP Q3ZD72 ASN 300 ENGINEERED MUTATION SEQADV 4OT0 ASP B 301 UNP Q3ZD72 ILE 301 ENGINEERED MUTATION SEQADV 4OT0 HIS B 368 UNP Q3ZD72 ASN 368 ENGINEERED MUTATION SEQADV 4OT0 ASP B 369 UNP Q3ZD72 ILE 369 ENGINEERED MUTATION SEQADV 4OT0 ASN B 402 UNP Q3ZD72 HIS 402 ENGINEERED MUTATION SEQADV 4OT0 GLY B 403 UNP Q3ZD72 ASP 403 ENGINEERED MUTATION SEQADV 4OT0 ASN B 436 UNP Q3ZD72 HIS 436 ENGINEERED MUTATION SEQADV 4OT0 GLY B 437 UNP Q3ZD72 ASP 437 ENGINEERED MUTATION SEQADV 4OT0 ASN B 470 UNP Q3ZD72 HIS 470 ENGINEERED MUTATION SEQADV 4OT0 GLY B 471 UNP Q3ZD72 ASP 471 ENGINEERED MUTATION SEQADV 4OT0 THR B 505 UNP Q3ZD72 SER 505 ENGINEERED MUTATION SEQADV 4OT0 GLY B 539 UNP Q3ZD72 SER 539 ENGINEERED MUTATION SEQADV 4OT0 HIS B 572 UNP Q3ZD72 ASN 572 ENGINEERED MUTATION SEQADV 4OT0 ASP B 573 UNP Q3ZD72 SER 573 ENGINEERED MUTATION SEQADV 4OT0 ASN B 606 UNP Q3ZD72 HIS 606 ENGINEERED MUTATION SEQADV 4OT0 GLY B 607 UNP Q3ZD72 ASP 607 ENGINEERED MUTATION SEQADV 4OT0 HIS B 640 UNP Q3ZD72 ASN 640 ENGINEERED MUTATION SEQADV 4OT0 ASP B 641 UNP Q3ZD72 ILE 641 ENGINEERED MUTATION SEQADV 4OT0 LEU B 721 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 GLU B 722 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS B 723 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS B 724 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS B 725 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS B 726 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS B 727 UNP Q3ZD72 EXPRESSION TAG SEQADV 4OT0 HIS B 728 UNP Q3ZD72 EXPRESSION TAG SEQRES 1 A 499 MET GLN TRP SER GLY ALA ARG ALA LEU GLU ALA LEU LEU SEQRES 2 A 499 THR VAL ALA GLY GLU LEU ARG GLY PRO PRO LEU GLN LEU SEQRES 3 A 499 ASP THR GLY GLN LEU LEU LYS ILE ALA LYS ARG GLY GLY SEQRES 4 A 499 VAL THR ALA VAL GLU ALA VAL HIS ALA TRP ARG ASN ALA SEQRES 5 A 499 LEU THR GLY ALA PRO LEU ASN LEU THR PRO GLU GLN VAL SEQRES 6 A 499 VAL ALA ILE ALA SER HIS ASP GLY GLY LYS GLN ALA LEU SEQRES 7 A 499 GLU THR VAL GLN ARG LEU LEU PRO VAL LEU CYS GLN ALA SEQRES 8 A 499 HIS GLY LEU THR PRO GLN GLN VAL VAL ALA ILE ALA SER SEQRES 9 A 499 HIS ASP GLY GLY LYS GLN ALA LEU GLU THR VAL GLN ARG SEQRES 10 A 499 LEU LEU PRO VAL LEU CYS GLN ALA HIS GLY LEU THR PRO SEQRES 11 A 499 GLU GLN VAL VAL ALA ILE ALA SER HIS ASP GLY GLY LYS SEQRES 12 A 499 GLN ALA LEU GLU THR VAL GLN ALA LEU LEU PRO VAL LEU SEQRES 13 A 499 CYS GLN ALA HIS GLY LEU THR PRO GLU GLN VAL VAL ALA SEQRES 14 A 499 ILE ALA SER ASN GLY GLY GLY LYS GLN ALA LEU GLU THR SEQRES 15 A 499 VAL GLN ARG LEU LEU PRO VAL LEU CYS GLN ALA HIS GLY SEQRES 16 A 499 LEU THR PRO GLN GLN VAL VAL ALA ILE ALA SER ASN GLY SEQRES 17 A 499 GLY GLY LYS GLN ALA LEU GLU THR VAL GLN ARG LEU LEU SEQRES 18 A 499 PRO VAL LEU CYS GLN ALA HIS GLY LEU THR PRO GLN GLN SEQRES 19 A 499 VAL VAL ALA ILE ALA SER ASN GLY GLY GLY LYS GLN ALA SEQRES 20 A 499 LEU GLU THR VAL GLN ARG LEU LEU PRO VAL LEU CYS GLN SEQRES 21 A 499 ALA HIS GLY LEU THR PRO GLN GLN VAL VAL ALA ILE ALA SEQRES 22 A 499 SER ASN THR GLY GLY LYS GLN ALA LEU GLU THR VAL GLN SEQRES 23 A 499 ARG LEU LEU PRO VAL LEU CYS GLN ALA HIS GLY LEU THR SEQRES 24 A 499 PRO GLN GLN VAL VAL ALA ILE ALA SER ASN GLY GLY GLY SEQRES 25 A 499 LYS GLN ALA LEU GLU THR VAL GLN ARG LEU LEU PRO VAL SEQRES 26 A 499 LEU CYS GLN ALA HIS GLY LEU THR PRO GLN GLN VAL VAL SEQRES 27 A 499 ALA ILE ALA SER HIS ASP GLY GLY LYS GLN ALA LEU GLU SEQRES 28 A 499 THR VAL GLN ARG LEU LEU PRO VAL LEU CYS GLN ALA HIS SEQRES 29 A 499 GLY LEU THR PRO GLU GLN VAL VAL ALA ILE ALA SER ASN SEQRES 30 A 499 GLY GLY GLY LYS GLN ALA LEU GLU THR VAL GLN ARG LEU SEQRES 31 A 499 LEU PRO VAL LEU CYS GLN ALA HIS GLY LEU THR PRO GLU SEQRES 32 A 499 GLN VAL VAL ALA ILE ALA SER HIS ASP GLY GLY LYS GLN SEQRES 33 A 499 ALA LEU GLU THR VAL GLN ARG LEU LEU PRO VAL LEU CYS SEQRES 34 A 499 GLN ALA HIS GLY LEU THR PRO GLN GLN VAL VAL ALA ILE SEQRES 35 A 499 ALA SER ASN GLY GLY GLY ARG PRO ALA LEU GLU SER ILE SEQRES 36 A 499 VAL ALA GLN LEU SER ARG PRO ASP PRO ALA LEU ALA ALA SEQRES 37 A 499 LEU THR ASN ASP HIS LEU VAL ALA LEU ALA CYS LEU GLY SEQRES 38 A 499 GLY ARG PRO ALA LEU ASP ALA VAL LYS LYS LEU GLU HIS SEQRES 39 A 499 HIS HIS HIS HIS HIS SEQRES 1 B 499 MET GLN TRP SER GLY ALA ARG ALA LEU GLU ALA LEU LEU SEQRES 2 B 499 THR VAL ALA GLY GLU LEU ARG GLY PRO PRO LEU GLN LEU SEQRES 3 B 499 ASP THR GLY GLN LEU LEU LYS ILE ALA LYS ARG GLY GLY SEQRES 4 B 499 VAL THR ALA VAL GLU ALA VAL HIS ALA TRP ARG ASN ALA SEQRES 5 B 499 LEU THR GLY ALA PRO LEU ASN LEU THR PRO GLU GLN VAL SEQRES 6 B 499 VAL ALA ILE ALA SER HIS ASP GLY GLY LYS GLN ALA LEU SEQRES 7 B 499 GLU THR VAL GLN ARG LEU LEU PRO VAL LEU CYS GLN ALA SEQRES 8 B 499 HIS GLY LEU THR PRO GLN GLN VAL VAL ALA ILE ALA SER SEQRES 9 B 499 HIS ASP GLY GLY LYS GLN ALA LEU GLU THR VAL GLN ARG SEQRES 10 B 499 LEU LEU PRO VAL LEU CYS GLN ALA HIS GLY LEU THR PRO SEQRES 11 B 499 GLU GLN VAL VAL ALA ILE ALA SER HIS ASP GLY GLY LYS SEQRES 12 B 499 GLN ALA LEU GLU THR VAL GLN ALA LEU LEU PRO VAL LEU SEQRES 13 B 499 CYS GLN ALA HIS GLY LEU THR PRO GLU GLN VAL VAL ALA SEQRES 14 B 499 ILE ALA SER ASN GLY GLY GLY LYS GLN ALA LEU GLU THR SEQRES 15 B 499 VAL GLN ARG LEU LEU PRO VAL LEU CYS GLN ALA HIS GLY SEQRES 16 B 499 LEU THR PRO GLN GLN VAL VAL ALA ILE ALA SER ASN GLY SEQRES 17 B 499 GLY GLY LYS GLN ALA LEU GLU THR VAL GLN ARG LEU LEU SEQRES 18 B 499 PRO VAL LEU CYS GLN ALA HIS GLY LEU THR PRO GLN GLN SEQRES 19 B 499 VAL VAL ALA ILE ALA SER ASN GLY GLY GLY LYS GLN ALA SEQRES 20 B 499 LEU GLU THR VAL GLN ARG LEU LEU PRO VAL LEU CYS GLN SEQRES 21 B 499 ALA HIS GLY LEU THR PRO GLN GLN VAL VAL ALA ILE ALA SEQRES 22 B 499 SER ASN THR GLY GLY LYS GLN ALA LEU GLU THR VAL GLN SEQRES 23 B 499 ARG LEU LEU PRO VAL LEU CYS GLN ALA HIS GLY LEU THR SEQRES 24 B 499 PRO GLN GLN VAL VAL ALA ILE ALA SER ASN GLY GLY GLY SEQRES 25 B 499 LYS GLN ALA LEU GLU THR VAL GLN ARG LEU LEU PRO VAL SEQRES 26 B 499 LEU CYS GLN ALA HIS GLY LEU THR PRO GLN GLN VAL VAL SEQRES 27 B 499 ALA ILE ALA SER HIS ASP GLY GLY LYS GLN ALA LEU GLU SEQRES 28 B 499 THR VAL GLN ARG LEU LEU PRO VAL LEU CYS GLN ALA HIS SEQRES 29 B 499 GLY LEU THR PRO GLU GLN VAL VAL ALA ILE ALA SER ASN SEQRES 30 B 499 GLY GLY GLY LYS GLN ALA LEU GLU THR VAL GLN ARG LEU SEQRES 31 B 499 LEU PRO VAL LEU CYS GLN ALA HIS GLY LEU THR PRO GLU SEQRES 32 B 499 GLN VAL VAL ALA ILE ALA SER HIS ASP GLY GLY LYS GLN SEQRES 33 B 499 ALA LEU GLU THR VAL GLN ARG LEU LEU PRO VAL LEU CYS SEQRES 34 B 499 GLN ALA HIS GLY LEU THR PRO GLN GLN VAL VAL ALA ILE SEQRES 35 B 499 ALA SER ASN GLY GLY GLY ARG PRO ALA LEU GLU SER ILE SEQRES 36 B 499 VAL ALA GLN LEU SER ARG PRO ASP PRO ALA LEU ALA ALA SEQRES 37 B 499 LEU THR ASN ASP HIS LEU VAL ALA LEU ALA CYS LEU GLY SEQRES 38 B 499 GLY ARG PRO ALA LEU ASP ALA VAL LYS LYS LEU GLU HIS SEQRES 39 B 499 HIS HIS HIS HIS HIS SEQRES 1 G 17 DT DG DT DC DC DC DT DT DT DA DT DC DT SEQRES 2 G 17 DC DT DC DT SEQRES 1 H 17 DA DG DA DG DA DG DA DT DA DA DA DG DG SEQRES 2 H 17 DG DA DC DA SEQRES 1 I 17 DT DG DT DC DC DC DT DT DT DA DT DC DT SEQRES 2 I 17 DC DT DC DT SEQRES 1 J 17 DA DG DA DG DA DG DA DT DA DA DA DG DG SEQRES 2 J 17 DG DA DC DA FORMUL 7 HOH *181(H2 O) HELIX 1 1 GLY A 234 LEU A 248 1 15 HELIX 2 2 ASP A 256 GLY A 267 1 12 HELIX 3 3 GLY A 267 TRP A 278 1 12 HELIX 4 4 TRP A 278 GLY A 284 1 7 HELIX 5 5 THR A 290 SER A 299 1 10 HELIX 6 6 GLY A 302 ALA A 320 1 19 HELIX 7 7 THR A 324 SER A 333 1 10 HELIX 8 8 GLY A 336 ALA A 354 1 19 HELIX 9 9 THR A 358 SER A 367 1 10 HELIX 10 10 GLY A 370 GLN A 387 1 18 HELIX 11 11 THR A 392 SER A 401 1 10 HELIX 12 12 GLY A 404 ALA A 422 1 19 HELIX 13 13 THR A 426 SER A 435 1 10 HELIX 14 14 GLY A 438 HIS A 457 1 20 HELIX 15 15 THR A 460 SER A 469 1 10 HELIX 16 16 GLY A 472 GLY A 492 1 21 HELIX 17 17 THR A 494 SER A 503 1 10 HELIX 18 18 GLY A 506 GLN A 523 1 18 HELIX 19 19 ALA A 524 GLY A 526 5 3 HELIX 20 20 THR A 528 SER A 537 1 10 HELIX 21 21 GLY A 540 GLY A 560 1 21 HELIX 22 22 THR A 562 SER A 571 1 10 HELIX 23 23 GLY A 574 ALA A 592 1 19 HELIX 24 24 THR A 596 SER A 605 1 10 HELIX 25 25 GLY A 608 ALA A 626 1 19 HELIX 26 26 THR A 630 SER A 639 1 10 HELIX 27 27 GLY A 642 ALA A 660 1 19 HELIX 28 28 THR A 664 SER A 673 1 10 HELIX 29 29 GLY A 676 ARG A 690 1 15 HELIX 30 30 ASP A 692 ALA A 696 5 5 HELIX 31 31 THR A 699 HIS A 723 1 25 HELIX 32 32 ARG B 236 LEU B 248 1 13 HELIX 33 33 ASP B 256 GLY B 267 1 12 HELIX 34 34 GLY B 267 GLY B 284 1 18 HELIX 35 35 THR B 290 SER B 299 1 10 HELIX 36 36 GLY B 302 GLY B 322 1 21 HELIX 37 37 THR B 324 SER B 333 1 10 HELIX 38 38 GLY B 336 CYS B 352 1 17 HELIX 39 39 THR B 358 SER B 367 1 10 HELIX 40 40 GLY B 370 GLY B 390 1 21 HELIX 41 41 THR B 392 SER B 401 1 10 HELIX 42 42 GLY B 404 CYS B 420 1 17 HELIX 43 43 THR B 426 ASN B 436 1 11 HELIX 44 44 GLY B 438 GLN B 455 1 18 HELIX 45 45 THR B 460 SER B 469 1 10 HELIX 46 46 GLY B 472 CYS B 488 1 17 HELIX 47 47 THR B 494 SER B 503 1 10 HELIX 48 48 GLY B 506 GLY B 526 1 21 HELIX 49 49 THR B 528 SER B 537 1 10 HELIX 50 50 GLY B 540 ALA B 558 1 19 HELIX 51 51 THR B 562 SER B 571 1 10 HELIX 52 52 GLY B 574 ALA B 592 1 19 HELIX 53 53 THR B 596 SER B 605 1 10 HELIX 54 54 GLY B 608 ALA B 626 1 19 HELIX 55 55 THR B 630 SER B 639 1 10 HELIX 56 56 GLY B 642 ALA B 660 1 19 HELIX 57 57 THR B 664 SER B 673 1 10 HELIX 58 58 GLY B 676 SER B 689 1 14 HELIX 59 59 THR B 699 LYS B 720 1 22 CISPEP 1 PRO A 251 PRO A 252 0 -0.20 CISPEP 2 ALA A 285 PRO A 286 0 2.50 CISPEP 3 PRO B 251 PRO B 252 0 -4.16 CISPEP 4 ALA B 285 PRO B 286 0 -4.05 CRYST1 81.102 87.017 87.791 90.00 103.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012330 0.000000 0.002847 0.00000 SCALE2 0.000000 0.011492 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011690 0.00000