HEADER SIGNALING PROTEIN 18-FEB-14 4OUS TITLE CRYSTAL STRUCTURE OF ZEBRAFISH CAPRIN-2 C1Q DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPRIN-2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 780-914; COMPND 5 SYNONYM: RNA GRANULE PROTEIN 140; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: LEOPARD DANIO,ZEBRA DANIO,ZEBRA FISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 GENE: CAPRIN2, RNG140, SI:CH211-11C20.4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS C1Q DOMAIN, WNT SIGNALING, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.SONG,L.LI REVDAT 3 08-NOV-23 4OUS 1 REMARK SEQADV LINK REVDAT 2 08-APR-15 4OUS 1 JRNL REVDAT 1 29-OCT-14 4OUS 0 JRNL AUTH H.MIAO,Y.JIA,S.XIE,X.WANG,J.ZHAO,Y.CHU,Z.ZHOU,Z.SHI,X.SONG, JRNL AUTH 2 L.LI JRNL TITL STRUCTURAL INSIGHTS INTO THE C1Q DOMAIN OF CAPRIN-2 IN JRNL TITL 2 CANONICAL WNT SIGNALING JRNL REF J.BIOL.CHEM. V. 289 34104 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 25331957 JRNL DOI 10.1074/JBC.M114.591636 REMARK 2 REMARK 2 RESOLUTION. 1.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.7 REMARK 3 NUMBER OF REFLECTIONS : 57340 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.161 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.490 REMARK 3 FREE R VALUE TEST SET COUNT : 2002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.6202 - 2.5203 0.73 3411 135 0.1653 0.1888 REMARK 3 2 2.5203 - 2.0049 0.75 3434 113 0.1547 0.1371 REMARK 3 3 2.0049 - 1.7527 0.74 3387 127 0.1519 0.1612 REMARK 3 4 1.7527 - 1.5931 0.94 4268 157 0.1415 0.1638 REMARK 3 5 1.5931 - 1.4792 0.93 4239 154 0.1375 0.1473 REMARK 3 6 1.4792 - 1.3922 0.92 4193 143 0.1481 0.1512 REMARK 3 7 1.3922 - 1.3226 0.92 4152 153 0.1436 0.1586 REMARK 3 8 1.3226 - 1.2651 0.90 4079 151 0.1503 0.1679 REMARK 3 9 1.2651 - 1.2165 0.91 4110 153 0.1479 0.1359 REMARK 3 10 1.2165 - 1.1746 0.90 4070 149 0.1413 0.1667 REMARK 3 11 1.1746 - 1.1379 0.91 4127 153 0.1384 0.1494 REMARK 3 12 1.1379 - 1.1054 0.90 4051 143 0.1457 0.1466 REMARK 3 13 1.1054 - 1.0763 0.87 3926 139 0.1595 0.1587 REMARK 3 14 1.0763 - 1.0501 0.86 3891 132 0.1821 0.1928 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.060 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1100 REMARK 3 ANGLE : 1.127 1506 REMARK 3 CHIRALITY : 0.048 165 REMARK 3 PLANARITY : 0.006 196 REMARK 3 DIHEDRAL : 12.418 384 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -33.1006 -20.2713 -15.6584 REMARK 3 T TENSOR REMARK 3 T11: 0.0492 T22: 0.0476 REMARK 3 T33: 0.0484 T12: -0.0015 REMARK 3 T13: 0.0031 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.4960 L22: 0.3845 REMARK 3 L33: 0.5010 L12: -0.0311 REMARK 3 L13: -0.0033 L23: -0.0986 REMARK 3 S TENSOR REMARK 3 S11: -0.0009 S12: -0.0198 S13: -0.0034 REMARK 3 S21: 0.0445 S22: -0.0047 S23: 0.0442 REMARK 3 S31: -0.0317 S32: -0.0315 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OUS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000084974. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97922 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63149 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1O91 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.0M SODIUM NITRATE, 0.1M BIS-TRIS REMARK 280 PROPANE PH7.0, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 47.49250 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 47.49250 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 47.49250 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 47.49250 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 47.49250 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 47.49250 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 47.49250 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 47.49250 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 47.49250 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 47.49250 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 47.49250 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 47.49250 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 47.49250 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 47.49250 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 47.49250 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 47.49250 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 47.49250 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 47.49250 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 47.49250 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 47.49250 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 47.49250 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 47.49250 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 47.49250 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 47.49250 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 47.49250 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 47.49250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A1201 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1396 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1400 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1401 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1402 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 998 REMARK 465 THR A 999 REMARK 465 GLN A 1000 REMARK 465 LEU A 1133 REMARK 465 GLU A 1134 REMARK 465 HIS A 1135 REMARK 465 HIS A 1136 REMARK 465 HIS A 1137 REMARK 465 HIS A 1138 REMARK 465 HIS A 1139 REMARK 465 HIS A 1140 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 HIS A 1088 O HOH A 1416 2.08 REMARK 500 O HOH A 1368 O HOH A 1412 2.11 REMARK 500 O HOH A 1419 O HOH A 1430 2.18 REMARK 500 OG SER A 1092 O HOH A 1403 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A1030 54.16 -152.13 REMARK 500 ASN A1030 54.16 -152.96 REMARK 500 SER A1062 49.87 -85.69 REMARK 500 ASN A1072 -115.17 53.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A1089 OE2 REMARK 620 2 GLU A1089 OE1 50.7 REMARK 620 3 HOH A1324 O 92.9 75.0 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OUL RELATED DB: PDB REMARK 900 RELATED ID: 4OUM RELATED DB: PDB DBREF 4OUS A 998 1132 UNP Q5RJ80 CAPR2_DANRE 780 914 SEQADV 4OUS MET A 998 UNP Q5RJ80 LEU 780 ENGINEERED MUTATION SEQADV 4OUS LEU A 1133 UNP Q5RJ80 EXPRESSION TAG SEQADV 4OUS GLU A 1134 UNP Q5RJ80 EXPRESSION TAG SEQADV 4OUS HIS A 1135 UNP Q5RJ80 EXPRESSION TAG SEQADV 4OUS HIS A 1136 UNP Q5RJ80 EXPRESSION TAG SEQADV 4OUS HIS A 1137 UNP Q5RJ80 EXPRESSION TAG SEQADV 4OUS HIS A 1138 UNP Q5RJ80 EXPRESSION TAG SEQADV 4OUS HIS A 1139 UNP Q5RJ80 EXPRESSION TAG SEQADV 4OUS HIS A 1140 UNP Q5RJ80 EXPRESSION TAG SEQRES 1 A 143 MET THR GLN LEU ARG VAL ALA PHE SER ALA ALA ARG THR SEQRES 2 A 143 ALA ASN PHE ALA PRO GLY THR LEU ASP GLN PRO ILE ALA SEQRES 3 A 143 PHE ASP LEU LEU HIS THR ASN LEU GLY ASP MET PHE ASP SEQRES 4 A 143 THR GLY SER GLY ARG PHE THR CYS PRO ALA THR GLY ALA SEQRES 5 A 143 TYR VAL PHE ILE PHE HIS ILE LEU LYS LEU ALA ILE SER SEQRES 6 A 143 VAL PRO LEU TYR ILE ASN LEU MET ARG ASN GLU GLU VAL SEQRES 7 A 143 MET VAL SER ALA TYR ALA ASN ASP GLY ALA PRO ASP HIS SEQRES 8 A 143 GLU THR ALA SER ASN HIS ALA VAL LEU GLN LEU PHE GLN SEQRES 9 A 143 GLY ASP GLN VAL TRP LEU ARG LEU HIS ARG GLY ALA ILE SEQRES 10 A 143 TYR GLY SER SER TRP LYS TYR SER THR PHE SER GLY PHE SEQRES 11 A 143 LEU LEU TYR GLN ASP LEU GLU HIS HIS HIS HIS HIS HIS HET CA A1201 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ FORMUL 3 HOH *130(H2 O) SHEET 1 A 5 LEU A1026 LEU A1031 0 SHEET 2 A 5 ALA A1004 ARG A1009 -1 N SER A1006 O HIS A1028 SHEET 3 A 5 SER A1122 GLN A1131 -1 O PHE A1124 N ALA A1007 SHEET 4 A 5 GLY A1048 LEU A1057 -1 N ALA A1049 O LEU A1129 SHEET 5 A 5 THR A1090 LEU A1099 -1 O LEU A1099 N GLY A1048 SHEET 1 B 4 GLN A1020 PRO A1021 0 SHEET 2 B 4 GLN A1104 ARG A1111 -1 O LEU A1109 N GLN A1020 SHEET 3 B 4 ARG A1041 THR A1043 -1 N PHE A1042 O VAL A1105 SHEET 4 B 4 PHE A1035 ASP A1036 -1 N ASP A1036 O ARG A1041 SHEET 1 C 4 GLN A1020 PRO A1021 0 SHEET 2 C 4 GLN A1104 ARG A1111 -1 O LEU A1109 N GLN A1020 SHEET 3 C 4 LEU A1065 ARG A1071 -1 N MET A1070 O TRP A1106 SHEET 4 C 4 GLU A1074 ALA A1081 -1 O MET A1076 N LEU A1069 LINK OE2 GLU A1089 CA CA A1201 1555 1555 2.53 LINK OE1 GLU A1089 CA CA A1201 1555 1555 2.56 LINK CA CA A1201 O HOH A1324 1555 1555 2.44 CISPEP 1 ALA A 1085 PRO A 1086 0 -3.53 SITE 1 AC1 2 GLU A1089 HOH A1324 CRYST1 94.985 94.985 94.985 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010528 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010528 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010528 0.00000