HEADER HYDROLASE 24-JAN-14 4OVY TITLE CRYSTAL STRUCTURE OF HALOACID DEHALOGENASE DOMAIN PROTEIN HYDROLASE TITLE 2 FROM PLANCTOMYCES LIMNOPHILUS DSM 3776 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HALOACID DEHALOGENASE DOMAIN PROTEIN HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 24-333; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLANCTOMYCES LIMNOPHILUS; SOURCE 3 ORGANISM_TAXID: 521674; SOURCE 4 STRAIN: DSM 3776; SOURCE 5 GENE: PLIM_1241; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PGROW7-K; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG73 KEYWDS HYDROLASE, PUTATIVE PHOSPHATASE, MCSG, PSI-BIOLOGY, STRUCTURAL KEYWDS 2 GENOMICS, MIDWEST CENTER FOR STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,M.GU,M.ENDRES,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 27-DEC-23 4OVY 1 REMARK REVDAT 3 22-NOV-17 4OVY 1 SOURCE JRNL REMARK REVDAT 2 25-FEB-15 4OVY 1 REMARK REVDAT 1 05-FEB-14 4OVY 0 JRNL AUTH C.CHANG,M.GU,M.ENDRES,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF HALOACID DEHALOGENASE DOMAIN PROTEIN JRNL TITL 2 HYDROLASE FROM PLANCTOMYCES LIMNOPHILUS DSM 3776 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 3 NUMBER OF REFLECTIONS : 30734 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.133 REMARK 3 R VALUE (WORKING SET) : 0.131 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1551 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1219 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 51.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.1590 REMARK 3 BIN FREE R VALUE SET COUNT : 66 REMARK 3 BIN FREE R VALUE : 0.2100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2446 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : -1.72000 REMARK 3 B33 (A**2) : 1.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.200 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.180 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2596 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2473 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3518 ; 1.103 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5687 ; 0.723 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 313 ; 5.243 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 122 ;30.819 ;22.869 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 407 ;11.381 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;10.183 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 375 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2914 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 601 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5069 ; 1.497 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 86 ;30.554 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5161 ;10.653 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4OVY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000200041. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97899 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33799 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.94700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M TRIS-AMMONIUM CITRATE, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 36.47500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.75100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.47500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.75100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 72.95000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 535 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 572 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 575 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 579 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 329 REMARK 465 PRO A 330 REMARK 465 SER A 331 REMARK 465 GLN A 332 REMARK 465 ASN A 333 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 66 -73.19 -100.34 REMARK 500 CYS A 161 37.99 -94.52 REMARK 500 GLN A 236 -126.75 55.02 REMARK 500 ASN A 257 -9.05 -147.69 REMARK 500 ALA A 273 -78.92 -56.14 REMARK 500 ASN A 274 28.78 88.73 REMARK 500 GLU A 288 -121.12 -144.51 REMARK 500 ASP A 292 -83.77 -154.48 REMARK 500 ASP A 301 -72.11 -151.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 409 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 65 OD2 REMARK 620 2 ASP A 67 O 100.2 REMARK 620 3 ASN A 257 OD1 95.7 77.3 REMARK 620 4 HOH A 662 O 140.5 99.8 121.8 REMARK 620 5 HOH A 733 O 59.2 157.3 111.7 92.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 409 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC100653 RELATED DB: TARGETTRACK DBREF 4OVY A 24 333 UNP D5SUM3 D5SUM3_PLAL2 24 333 SEQRES 1 A 310 GLU GLU PRO LEU PRO SER TRP ASN ASP SER ALA ALA ARG SEQRES 2 A 310 ARG ALA ILE LEU GLU TYR VAL LYS SER VAL THR THR GLU SEQRES 3 A 310 GLY SER PRO ARG PHE VAL PRO VAL SER GLU ARG ILE VAL SEQRES 4 A 310 THR PHE ASP ASN ASP GLY THR LEU TRP CYS GLU GLN PRO SEQRES 5 A 310 MSE TYR VAL GLN LEU ALA PHE ALA LEU ASP ARG VAL ARG SEQRES 6 A 310 LEU LEU ALA ASP LYS HIS PRO GLU TRP ARG THR GLU GLU SEQRES 7 A 310 PRO PHE ARG ALA VAL ILE GLU LYS ASP LEU PRO ALA LEU SEQRES 8 A 310 ALA LYS LEU GLY ALA LYS GLY LEU THR GLU LEU THR MSE SEQRES 9 A 310 ALA THR HIS ALA GLY MSE THR ASP ASP GLU PHE GLU ASN SEQRES 10 A 310 ILE VAL THR GLU TRP ILE ARG LYS ALA ARG HIS PRO LYS SEQRES 11 A 310 PHE HIS ARG PRO TYR THR GLU CYS VAL TYR GLN PRO MSE SEQRES 12 A 310 LEU GLU LEU LEU ALA PHE LEU ARG GLN HIS GLU PHE LYS SEQRES 13 A 310 THR PHE ILE VAL SER GLY ALA GLY ILE GLU PHE MSE ARG SEQRES 14 A 310 PRO TRP ALA LYS GLU VAL TYR GLY ILE PRO PRO GLU GLN SEQRES 15 A 310 VAL ILE GLY SER SER VAL LYS LEU LYS TYR GLU LEU ARG SEQRES 16 A 310 ASP GLY LYS PRO VAL LEU VAL ARG LEU ALA GLU LEU ASN SEQRES 17 A 310 PHE ILE ASP ASP GLN ALA GLY LYS PRO VAL GLY ILE ARG SEQRES 18 A 310 GLN VAL ILE GLY ARG ARG PRO VAL MSE ALA VAL GLY ASN SEQRES 19 A 310 SER ASP GLY ASP TYR GLU MSE LEU GLU TYR VAL THR SER SEQRES 20 A 310 GLY PRO ALA ASN GLY LEU GLY LEU ILE VAL HIS HIS THR SEQRES 21 A 310 ASP ALA VAL ARG GLU PHE ALA TYR ASP ARG GLN SER PRO SEQRES 22 A 310 PHE GLY ARG LEU ASP ARG ALA LEU THR ASP ALA THR SER SEQRES 23 A 310 LYS GLY TRP ILE VAL ILE ASP MSE GLN ARG ASP TRP LYS SEQRES 24 A 310 VAL ILE PHE PRO GLU SER ARG PRO SER GLN ASN MODRES 4OVY MSE A 76 MET MODIFIED RESIDUE MODRES 4OVY MSE A 127 MET MODIFIED RESIDUE MODRES 4OVY MSE A 133 MET MODIFIED RESIDUE MODRES 4OVY MSE A 166 MET MODIFIED RESIDUE MODRES 4OVY MSE A 191 MET MODIFIED RESIDUE MODRES 4OVY MSE A 253 MET MODIFIED RESIDUE MODRES 4OVY MSE A 264 MET MODIFIED RESIDUE MODRES 4OVY MSE A 317 MET MODIFIED RESIDUE HET MSE A 76 8 HET MSE A 127 8 HET MSE A 133 8 HET MSE A 166 8 HET MSE A 191 8 HET MSE A 253 8 HET MSE A 264 8 HET MSE A 317 8 HET CIT A 401 13 HET CIT A 402 13 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET CA A 409 1 HETNAM MSE SELENOMETHIONINE HETNAM CIT CITRIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 CIT 2(C6 H8 O7) FORMUL 4 EDO 6(C2 H6 O2) FORMUL 10 CA CA 2+ FORMUL 11 HOH *236(H2 O) HELIX 1 AA1 SER A 33 THR A 48 1 16 HELIX 2 AA2 PRO A 56 GLU A 59 5 4 HELIX 3 AA3 TYR A 77 ALA A 91 1 15 HELIX 4 AA4 ASP A 92 THR A 99 5 8 HELIX 5 AA5 PRO A 102 GLU A 108 1 7 HELIX 6 AA6 ASP A 110 ALA A 115 1 6 HELIX 7 AA7 LEU A 117 HIS A 130 1 14 HELIX 8 AA8 THR A 134 ALA A 149 1 16 HELIX 9 AA9 PRO A 157 CYS A 161 5 5 HELIX 10 AB1 TYR A 163 HIS A 176 1 14 HELIX 11 AB2 ILE A 188 ARG A 192 1 5 HELIX 12 AB3 TRP A 194 GLY A 200 1 7 HELIX 13 AB4 PRO A 202 GLU A 204 5 3 HELIX 14 AB5 ALA A 237 ILE A 247 1 11 HELIX 15 AB6 SER A 258 GLY A 260 5 3 HELIX 16 AB7 ASP A 261 SER A 270 1 10 HELIX 17 AB8 ASP A 301 GLY A 311 1 11 HELIX 18 AB9 MSE A 317 TRP A 321 1 5 SHEET 1 AA1 7 LYS A 221 PHE A 232 0 SHEET 2 AA1 7 VAL A 206 ARG A 218 -1 N GLU A 216 O VAL A 223 SHEET 3 AA1 7 LYS A 179 GLY A 187 1 N ALA A 186 O SER A 209 SHEET 4 AA1 7 ILE A 61 PHE A 64 1 N VAL A 62 O PHE A 181 SHEET 5 AA1 7 MSE A 253 GLY A 256 1 O VAL A 255 N THR A 63 SHEET 6 AA1 7 LEU A 276 THR A 283 1 O VAL A 280 N GLY A 256 SHEET 7 AA1 7 ALA A 290 TYR A 291 -1 O TYR A 291 N HIS A 282 SHEET 1 AA2 7 LYS A 221 PHE A 232 0 SHEET 2 AA2 7 VAL A 206 ARG A 218 -1 N GLU A 216 O VAL A 223 SHEET 3 AA2 7 LYS A 179 GLY A 187 1 N ALA A 186 O SER A 209 SHEET 4 AA2 7 ILE A 61 PHE A 64 1 N VAL A 62 O PHE A 181 SHEET 5 AA2 7 MSE A 253 GLY A 256 1 O VAL A 255 N THR A 63 SHEET 6 AA2 7 LEU A 276 THR A 283 1 O VAL A 280 N GLY A 256 SHEET 7 AA2 7 ILE A 313 ASP A 316 1 O ILE A 315 N ILE A 279 LINK C PRO A 75 N MSE A 76 1555 1555 1.33 LINK C MSE A 76 N TYR A 77 1555 1555 1.33 LINK C THR A 126 N MSE A 127 1555 1555 1.33 LINK C MSE A 127 N ALA A 128 1555 1555 1.33 LINK C GLY A 132 N MSE A 133 1555 1555 1.33 LINK C MSE A 133 N THR A 134 1555 1555 1.33 LINK C PRO A 165 N MSE A 166 1555 1555 1.33 LINK C MSE A 166 N LEU A 167 1555 1555 1.33 LINK C PHE A 190 N MSE A 191 1555 1555 1.33 LINK C MSE A 191 N ARG A 192 1555 1555 1.33 LINK C VAL A 252 N MSE A 253 1555 1555 1.33 LINK C MSE A 253 N ALA A 254 1555 1555 1.33 LINK C GLU A 263 N MSE A 264 1555 1555 1.33 LINK C MSE A 264 N LEU A 265 1555 1555 1.33 LINK C ASP A 316 N MSE A 317 1555 1555 1.34 LINK C MSE A 317 N GLN A 318 1555 1555 1.33 LINK OD2 ASP A 65 CA CA A 409 1555 1555 2.31 LINK O ASP A 67 CA CA A 409 1555 1555 2.46 LINK OD1 ASN A 257 CA CA A 409 1555 1555 2.42 LINK CA CA A 409 O HOH A 662 1555 1555 2.09 LINK CA CA A 409 O HOH A 733 1555 1555 2.82 CISPEP 1 GLN A 74 PRO A 75 0 3.32 CISPEP 2 GLU A 101 PRO A 102 0 -0.11 SITE 1 AC1 4 ARG A 37 ARG A 319 HOH A 622 HOH A 633 SITE 1 AC2 4 ARG A 150 PRO A 152 HIS A 155 HOH A 660 SITE 1 AC3 6 ILE A 188 ILE A 207 GLY A 208 SER A 210 SITE 2 AC3 6 EDO A 408 HOH A 533 SITE 1 AC4 6 ALA A 91 ASP A 92 ARG A 98 ALA A 237 SITE 2 AC4 6 GLU A 263 HOH A 509 SITE 1 AC5 1 GLN A 164 SITE 1 AC6 4 ASN A 31 GLN A 318 ARG A 319 LYS A 322 SITE 1 AC7 5 ASP A 67 ALA A 119 GLY A 185 ASP A 235 SITE 2 AC7 5 HOH A 626 SITE 1 AC8 5 ASN A 231 PHE A 232 GLN A 245 EDO A 403 SITE 2 AC8 5 HOH A 505 SITE 1 AC9 5 ASP A 65 ASP A 67 ASN A 257 HOH A 662 SITE 2 AC9 5 HOH A 733 CRYST1 72.950 75.502 64.357 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013708 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013245 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015538 0.00000