HEADER TOXIN, TRANSFERASE 28-JAN-14 4OW6 TITLE CRYSTAL STRUCTURE OF DIPHTHERIA TOXIN AT ACIDIC PH COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIPHTHERIA TOXIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 26-560; COMPND 5 EC: 2.4.2.36 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM DIPHTHERIAE; SOURCE 3 ORGANISM_TAXID: 698963; SOURCE 4 STRAIN: C7 (BETA); SOURCE 5 ATCC: 27012/C7 (BETA) KEYWDS DIPHTHERIA TOXIN TRANSLOCATION, MEMBRANE INSERTION, BICELLES, KEYWDS 2 MEMBRANE CHANNELS, TOXIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR O.LEKA,F.VALLESE,M.PIRAZZINI,P.BERTO,C.MONTECUCCO,G.ZANOTTI REVDAT 4 23-OCT-24 4OW6 1 REMARK REVDAT 3 27-DEC-23 4OW6 1 SOURCE KEYWDS REMARK REVDAT 2 01-OCT-14 4OW6 1 JRNL REVDAT 1 02-APR-14 4OW6 0 JRNL AUTH O.LEKA,F.VALLESE,M.PIRAZZINI,P.BERTO,C.MONTECUCCO,G.ZANOTTI JRNL TITL DIPHTHERIA TOXIN CONFORMATIONAL SWITCHING AT ACIDIC PH. JRNL REF FEBS J. V. 281 2115 2014 JRNL REFN ISSN 1742-464X JRNL PMID 24628974 JRNL DOI 10.1111/FEBS.12783 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 28350 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.322 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1406 - 6.0281 1.00 3062 156 0.2330 0.2901 REMARK 3 2 6.0281 - 4.7864 1.00 2883 160 0.2187 0.3017 REMARK 3 3 4.7864 - 4.1819 0.99 2869 146 0.1828 0.2400 REMARK 3 4 4.1819 - 3.7997 0.86 2458 118 0.2426 0.3741 REMARK 3 5 3.7997 - 3.5275 0.85 2391 131 0.2939 0.3521 REMARK 3 6 3.5275 - 3.3196 0.83 2304 149 0.2544 0.3874 REMARK 3 7 3.3196 - 3.1534 0.98 2745 130 0.2435 0.3556 REMARK 3 8 3.1534 - 3.0162 0.98 2758 157 0.2494 0.3318 REMARK 3 9 3.0162 - 2.9001 0.97 2717 155 0.2615 0.3539 REMARK 3 10 2.9001 - 2.8000 0.98 2711 150 0.2902 0.3423 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7522 REMARK 3 ANGLE : 1.507 10192 REMARK 3 CHIRALITY : 0.059 1153 REMARK 3 PLANARITY : 0.008 1323 REMARK 3 DIHEDRAL : 15.722 2714 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OW6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000200076. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8729 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30102 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.19200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.68300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 0.1 M TRIS REMARK 280 -HCL PH 8.5, 25% W/V PEG 4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.72000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.01000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.64000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.01000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.72000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 70.64000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 188 REMARK 465 ASN A 189 REMARK 465 ARG A 190 REMARK 465 VAL A 191 REMARK 465 ARG A 192 REMARK 465 ARG A 193 REMARK 465 SER A 194 REMARK 465 VAL A 195 REMARK 465 GLY A 196 REMARK 465 SER A 197 REMARK 465 SER A 198 REMARK 465 LEU A 199 REMARK 465 LYS A 221 REMARK 465 GLU A 222 REMARK 465 HIS A 223 REMARK 465 GLY A 224 REMARK 465 PRO A 225 REMARK 465 ILE A 226 REMARK 465 LYS A 227 REMARK 465 ASN A 228 REMARK 465 LYS A 229 REMARK 465 MET A 230 REMARK 465 SER A 231 REMARK 465 GLU A 232 REMARK 465 SER A 233 REMARK 465 PRO A 234 REMARK 465 ASN A 235 REMARK 465 LYS A 236 REMARK 465 THR A 237 REMARK 465 VAL A 238 REMARK 465 SER A 239 REMARK 465 GLU A 240 REMARK 465 GLU A 241 REMARK 465 LYS A 242 REMARK 465 ALA A 243 REMARK 465 LYS A 244 REMARK 465 GLN A 245 REMARK 465 TYR A 246 REMARK 465 LEU A 247 REMARK 465 GLU A 248 REMARK 465 GLU A 249 REMARK 465 PHE A 250 REMARK 465 HIS A 251 REMARK 465 GLN A 252 REMARK 465 THR A 253 REMARK 465 ALA A 254 REMARK 465 LEU A 255 REMARK 465 GLU A 256 REMARK 465 HIS A 257 REMARK 465 PRO A 258 REMARK 465 GLU A 259 REMARK 465 LEU A 260 REMARK 465 SER A 261 REMARK 465 GLU A 262 REMARK 465 LEU A 263 REMARK 465 LYS A 264 REMARK 465 THR A 265 REMARK 465 VAL A 266 REMARK 465 GLY B 188 REMARK 465 ASN B 189 REMARK 465 ARG B 190 REMARK 465 VAL B 191 REMARK 465 ARG B 192 REMARK 465 ARG B 193 REMARK 465 SER B 194 REMARK 465 VAL B 195 REMARK 465 GLY B 196 REMARK 465 SER B 197 REMARK 465 SER B 198 REMARK 465 LEU B 199 REMARK 465 LYS B 221 REMARK 465 GLU B 222 REMARK 465 HIS B 223 REMARK 465 GLY B 224 REMARK 465 PRO B 225 REMARK 465 ILE B 226 REMARK 465 LYS B 227 REMARK 465 ASN B 228 REMARK 465 LYS B 229 REMARK 465 MET B 230 REMARK 465 SER B 231 REMARK 465 GLU B 232 REMARK 465 SER B 233 REMARK 465 PRO B 234 REMARK 465 ASN B 235 REMARK 465 LYS B 236 REMARK 465 THR B 237 REMARK 465 VAL B 238 REMARK 465 SER B 239 REMARK 465 GLU B 240 REMARK 465 GLU B 241 REMARK 465 LYS B 242 REMARK 465 ALA B 243 REMARK 465 LYS B 244 REMARK 465 GLN B 245 REMARK 465 TYR B 246 REMARK 465 LEU B 247 REMARK 465 GLU B 248 REMARK 465 GLU B 249 REMARK 465 PHE B 250 REMARK 465 HIS B 251 REMARK 465 GLN B 252 REMARK 465 THR B 253 REMARK 465 ALA B 254 REMARK 465 LEU B 255 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 256 CG CD OE1 OE2 REMARK 470 HIS B 257 CG ND1 CD2 CE1 NE2 REMARK 470 PRO B 258 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU B 106 NH2 ARG B 126 1.98 REMARK 500 O ASN A 45 NZ LYS A 51 2.13 REMARK 500 OE1 GLN B 515 NZ LYS B 522 2.14 REMARK 500 OG SER A 337 O ALA A 356 2.14 REMARK 500 OG SER B 337 O ALA B 356 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 388 C - N - CA ANGL. DEV. = 10.2 DEGREES REMARK 500 PRO B 438 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 43 -10.04 76.05 REMARK 500 SER A 132 -23.31 61.68 REMARK 500 ILE A 165 139.41 -171.70 REMARK 500 ALA A 185 9.49 -69.16 REMARK 500 LYS A 212 0.35 -63.59 REMARK 500 GLU A 218 -155.23 -82.99 REMARK 500 SER A 219 -72.07 -113.66 REMARK 500 PHE A 273 -39.86 76.41 REMARK 500 ILE A 306 35.34 -96.85 REMARK 500 PRO A 345 21.43 -68.22 REMARK 500 VAL A 347 -38.75 -133.92 REMARK 500 LEU A 350 24.89 26.06 REMARK 500 TYR A 358 -87.29 -111.56 REMARK 500 HIS A 391 131.95 -171.95 REMARK 500 TYR A 394 -155.01 -91.86 REMARK 500 ALA A 395 121.00 -170.72 REMARK 500 VAL A 401 -34.97 -37.82 REMARK 500 ASN A 424 -68.71 -148.78 REMARK 500 ASP A 465 -151.08 -155.33 REMARK 500 ASP A 467 53.20 85.40 REMARK 500 ASN A 481 104.21 -52.80 REMARK 500 SER A 496 36.10 -97.97 REMARK 500 GLU A 497 -171.92 -68.19 REMARK 500 SER A 501 62.96 -59.01 REMARK 500 ASN A 502 37.43 -142.18 REMARK 500 GLU A 503 7.03 -150.69 REMARK 500 ASP A 519 54.07 -1.94 REMARK 500 SER A 525 109.66 -52.14 REMARK 500 ARG B 133 154.85 177.14 REMARK 500 ALA B 141 149.65 -179.38 REMARK 500 ALA B 156 -9.58 -59.40 REMARK 500 SER B 219 64.06 -104.38 REMARK 500 SER B 261 91.77 -22.24 REMARK 500 GLU B 262 -23.29 -151.99 REMARK 500 LEU B 263 -54.86 -177.42 REMARK 500 THR B 265 81.14 -151.43 REMARK 500 PRO B 271 63.40 -65.26 REMARK 500 PHE B 273 -16.42 -146.54 REMARK 500 ALA B 274 -171.76 66.12 REMARK 500 ILE B 306 33.27 -98.95 REMARK 500 GLU B 349 -154.14 -167.43 REMARK 500 LEU B 350 2.02 -28.51 REMARK 500 TYR B 358 -87.80 -113.18 REMARK 500 HIS B 391 134.14 -175.26 REMARK 500 ALA B 395 121.96 -174.84 REMARK 500 ASN B 424 -69.21 -147.19 REMARK 500 ASP B 465 -156.60 -153.11 REMARK 500 ASN B 481 105.09 -53.49 REMARK 500 SER B 496 1.77 -177.41 REMARK 500 GLU B 497 -167.84 -68.58 REMARK 500 REMARK 500 THIS ENTRY HAS 52 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 4OW6 A 1 535 UNP H2GU79 H2GU79_CORD7 26 560 DBREF 4OW6 B 1 535 UNP H2GU79 H2GU79_CORD7 26 560 SEQRES 1 A 535 GLY ALA ASP ASP VAL VAL ASP SER SER LYS SER PHE VAL SEQRES 2 A 535 MET GLU ASN PHE SER SER TYR HIS GLY THR LYS PRO GLY SEQRES 3 A 535 TYR VAL ASP SER ILE GLN LYS GLY ILE GLN LYS PRO LYS SEQRES 4 A 535 SER GLY THR GLN GLY ASN TYR ASP ASP ASP TRP LYS GLY SEQRES 5 A 535 PHE TYR SER THR ASP ASN LYS TYR ASP ALA ALA GLY TYR SEQRES 6 A 535 SER VAL ASP ASN GLU ASN PRO LEU SER GLY LYS ALA GLY SEQRES 7 A 535 GLY VAL VAL LYS VAL THR TYR PRO GLY LEU THR LYS VAL SEQRES 8 A 535 LEU ALA LEU LYS VAL ASP ASN ALA GLU THR ILE LYS LYS SEQRES 9 A 535 GLU LEU GLY LEU SER LEU THR GLU PRO LEU MET GLU GLN SEQRES 10 A 535 VAL GLY THR GLU GLU PHE ILE LYS ARG PHE GLY ASP GLY SEQRES 11 A 535 ALA SER ARG VAL VAL LEU SER LEU PRO PHE ALA GLU GLY SEQRES 12 A 535 SER SER SER VAL GLU TYR ILE ASN ASN TRP GLU GLN ALA SEQRES 13 A 535 LYS ALA LEU SER VAL GLU LEU GLU ILE ASN PHE GLU THR SEQRES 14 A 535 ARG GLY LYS ARG GLY GLN ASP ALA MET TYR GLU TYR MET SEQRES 15 A 535 ALA GLN ALA CYS ALA GLY ASN ARG VAL ARG ARG SER VAL SEQRES 16 A 535 GLY SER SER LEU SER CYS ILE ASN LEU ASP TRP ASP VAL SEQRES 17 A 535 ILE ARG ASP LYS THR LYS THR LYS ILE GLU SER LEU LYS SEQRES 18 A 535 GLU HIS GLY PRO ILE LYS ASN LYS MET SER GLU SER PRO SEQRES 19 A 535 ASN LYS THR VAL SER GLU GLU LYS ALA LYS GLN TYR LEU SEQRES 20 A 535 GLU GLU PHE HIS GLN THR ALA LEU GLU HIS PRO GLU LEU SEQRES 21 A 535 SER GLU LEU LYS THR VAL THR GLY THR ASN PRO VAL PHE SEQRES 22 A 535 ALA GLY ALA ASN TYR ALA ALA TRP ALA VAL ASN VAL ALA SEQRES 23 A 535 GLN VAL ILE ASP SER GLU THR ALA ASP ASN LEU GLU LYS SEQRES 24 A 535 THR THR ALA ALA LEU SER ILE LEU PRO GLY ILE GLY SER SEQRES 25 A 535 VAL MET GLY ILE ALA ASP GLY ALA VAL HIS HIS ASN THR SEQRES 26 A 535 GLU GLU ILE VAL ALA GLN SER ILE ALA LEU SER SER LEU SEQRES 27 A 535 MET VAL ALA GLN ALA ILE PRO LEU VAL GLY GLU LEU VAL SEQRES 28 A 535 ASP ILE GLY PHE ALA ALA TYR ASN PHE VAL GLU SER ILE SEQRES 29 A 535 ILE ASN LEU PHE GLN VAL VAL HIS ASN SER TYR ASN ARG SEQRES 30 A 535 PRO ALA TYR SER PRO GLY HIS LYS THR GLN PRO PHE LEU SEQRES 31 A 535 HIS ASP GLY TYR ALA VAL SER TRP ASN THR VAL GLU ASP SEQRES 32 A 535 SER ILE ILE ARG THR GLY PHE GLN GLY GLU SER GLY HIS SEQRES 33 A 535 ASP ILE LYS ILE THR ALA GLU ASN THR PRO LEU PRO ILE SEQRES 34 A 535 ALA GLY VAL LEU LEU PRO THR ILE PRO GLY LYS LEU ASP SEQRES 35 A 535 VAL ASN LYS SER LYS THR HIS ILE SER VAL ASN GLY ARG SEQRES 36 A 535 LYS ILE ARG MET ARG CYS ARG ALA ILE ASP GLY ASP VAL SEQRES 37 A 535 THR PHE CYS ARG PRO LYS SER PRO VAL TYR VAL GLY ASN SEQRES 38 A 535 GLY VAL HIS ALA ASN LEU HIS VAL ALA PHE HIS ARG SER SEQRES 39 A 535 SER SER GLU LYS ILE HIS SER ASN GLU ILE SER SER ASP SEQRES 40 A 535 SER ILE GLY VAL LEU GLY TYR GLN LYS THR VAL ASP HIS SEQRES 41 A 535 THR LYS VAL ASN SER LYS LEU SER LEU PHE PHE GLU ILE SEQRES 42 A 535 LYS SER SEQRES 1 B 535 GLY ALA ASP ASP VAL VAL ASP SER SER LYS SER PHE VAL SEQRES 2 B 535 MET GLU ASN PHE SER SER TYR HIS GLY THR LYS PRO GLY SEQRES 3 B 535 TYR VAL ASP SER ILE GLN LYS GLY ILE GLN LYS PRO LYS SEQRES 4 B 535 SER GLY THR GLN GLY ASN TYR ASP ASP ASP TRP LYS GLY SEQRES 5 B 535 PHE TYR SER THR ASP ASN LYS TYR ASP ALA ALA GLY TYR SEQRES 6 B 535 SER VAL ASP ASN GLU ASN PRO LEU SER GLY LYS ALA GLY SEQRES 7 B 535 GLY VAL VAL LYS VAL THR TYR PRO GLY LEU THR LYS VAL SEQRES 8 B 535 LEU ALA LEU LYS VAL ASP ASN ALA GLU THR ILE LYS LYS SEQRES 9 B 535 GLU LEU GLY LEU SER LEU THR GLU PRO LEU MET GLU GLN SEQRES 10 B 535 VAL GLY THR GLU GLU PHE ILE LYS ARG PHE GLY ASP GLY SEQRES 11 B 535 ALA SER ARG VAL VAL LEU SER LEU PRO PHE ALA GLU GLY SEQRES 12 B 535 SER SER SER VAL GLU TYR ILE ASN ASN TRP GLU GLN ALA SEQRES 13 B 535 LYS ALA LEU SER VAL GLU LEU GLU ILE ASN PHE GLU THR SEQRES 14 B 535 ARG GLY LYS ARG GLY GLN ASP ALA MET TYR GLU TYR MET SEQRES 15 B 535 ALA GLN ALA CYS ALA GLY ASN ARG VAL ARG ARG SER VAL SEQRES 16 B 535 GLY SER SER LEU SER CYS ILE ASN LEU ASP TRP ASP VAL SEQRES 17 B 535 ILE ARG ASP LYS THR LYS THR LYS ILE GLU SER LEU LYS SEQRES 18 B 535 GLU HIS GLY PRO ILE LYS ASN LYS MET SER GLU SER PRO SEQRES 19 B 535 ASN LYS THR VAL SER GLU GLU LYS ALA LYS GLN TYR LEU SEQRES 20 B 535 GLU GLU PHE HIS GLN THR ALA LEU GLU HIS PRO GLU LEU SEQRES 21 B 535 SER GLU LEU LYS THR VAL THR GLY THR ASN PRO VAL PHE SEQRES 22 B 535 ALA GLY ALA ASN TYR ALA ALA TRP ALA VAL ASN VAL ALA SEQRES 23 B 535 GLN VAL ILE ASP SER GLU THR ALA ASP ASN LEU GLU LYS SEQRES 24 B 535 THR THR ALA ALA LEU SER ILE LEU PRO GLY ILE GLY SER SEQRES 25 B 535 VAL MET GLY ILE ALA ASP GLY ALA VAL HIS HIS ASN THR SEQRES 26 B 535 GLU GLU ILE VAL ALA GLN SER ILE ALA LEU SER SER LEU SEQRES 27 B 535 MET VAL ALA GLN ALA ILE PRO LEU VAL GLY GLU LEU VAL SEQRES 28 B 535 ASP ILE GLY PHE ALA ALA TYR ASN PHE VAL GLU SER ILE SEQRES 29 B 535 ILE ASN LEU PHE GLN VAL VAL HIS ASN SER TYR ASN ARG SEQRES 30 B 535 PRO ALA TYR SER PRO GLY HIS LYS THR GLN PRO PHE LEU SEQRES 31 B 535 HIS ASP GLY TYR ALA VAL SER TRP ASN THR VAL GLU ASP SEQRES 32 B 535 SER ILE ILE ARG THR GLY PHE GLN GLY GLU SER GLY HIS SEQRES 33 B 535 ASP ILE LYS ILE THR ALA GLU ASN THR PRO LEU PRO ILE SEQRES 34 B 535 ALA GLY VAL LEU LEU PRO THR ILE PRO GLY LYS LEU ASP SEQRES 35 B 535 VAL ASN LYS SER LYS THR HIS ILE SER VAL ASN GLY ARG SEQRES 36 B 535 LYS ILE ARG MET ARG CYS ARG ALA ILE ASP GLY ASP VAL SEQRES 37 B 535 THR PHE CYS ARG PRO LYS SER PRO VAL TYR VAL GLY ASN SEQRES 38 B 535 GLY VAL HIS ALA ASN LEU HIS VAL ALA PHE HIS ARG SER SEQRES 39 B 535 SER SER GLU LYS ILE HIS SER ASN GLU ILE SER SER ASP SEQRES 40 B 535 SER ILE GLY VAL LEU GLY TYR GLN LYS THR VAL ASP HIS SEQRES 41 B 535 THR LYS VAL ASN SER LYS LEU SER LEU PHE PHE GLU ILE SEQRES 42 B 535 LYS SER HELIX 1 AA1 GLY A 1 VAL A 5 1 5 HELIX 2 AA2 SER A 30 GLY A 34 5 5 HELIX 3 AA3 ASP A 47 LYS A 51 5 5 HELIX 4 AA4 ASN A 58 GLY A 64 1 7 HELIX 5 AA5 ASN A 98 LEU A 106 1 9 HELIX 6 AA6 PRO A 113 GLY A 119 1 7 HELIX 7 AA7 THR A 120 GLY A 128 1 9 HELIX 8 AA8 GLU A 154 LEU A 159 5 6 HELIX 9 AA9 GLN A 175 ALA A 183 1 9 HELIX 10 AB1 GLN A 184 CYS A 186 5 3 HELIX 11 AB2 TRP A 206 THR A 215 1 10 HELIX 12 AB3 TYR A 278 ILE A 289 1 12 HELIX 13 AB4 ASP A 290 ASP A 295 1 6 HELIX 14 AB5 ASN A 296 ILE A 306 1 11 HELIX 15 AB6 GLY A 309 VAL A 313 5 5 HELIX 16 AB7 THR A 325 GLN A 342 1 18 HELIX 17 AB8 ALA A 343 VAL A 347 5 5 HELIX 18 AB9 TYR A 358 ASN A 376 1 19 HELIX 19 AC1 THR A 400 ILE A 405 5 6 HELIX 20 AC2 GLY B 1 VAL B 5 5 5 HELIX 21 AC3 ASP B 7 SER B 11 5 5 HELIX 22 AC4 SER B 30 GLY B 34 5 5 HELIX 23 AC5 ASP B 47 LYS B 51 5 5 HELIX 24 AC6 ASN B 58 GLY B 64 1 7 HELIX 25 AC7 ASN B 98 LEU B 106 1 9 HELIX 26 AC8 PRO B 113 VAL B 118 1 6 HELIX 27 AC9 THR B 120 GLY B 128 1 9 HELIX 28 AD1 GLU B 154 LEU B 159 5 6 HELIX 29 AD2 GLN B 175 ALA B 183 1 9 HELIX 30 AD3 GLN B 184 CYS B 186 5 3 HELIX 31 AD4 TRP B 206 GLU B 218 1 13 HELIX 32 AD5 ALA B 276 ILE B 289 1 14 HELIX 33 AD6 ASP B 290 ASP B 295 1 6 HELIX 34 AD7 ASN B 296 ILE B 306 1 11 HELIX 35 AD8 GLY B 309 VAL B 313 5 5 HELIX 36 AD9 THR B 325 GLN B 342 1 18 HELIX 37 AE1 ALA B 343 GLY B 348 1 6 HELIX 38 AE2 TYR B 358 ASN B 376 1 19 HELIX 39 AE3 THR B 400 ASP B 403 5 4 SHEET 1 AA1 5 VAL A 6 GLU A 15 0 SHEET 2 AA1 5 LEU A 88 LEU A 94 -1 O VAL A 91 N PHE A 12 SHEET 3 AA1 5 VAL A 134 PRO A 139 1 O VAL A 135 N LEU A 92 SHEET 4 AA1 5 VAL A 147 ASN A 151 -1 O GLU A 148 N LEU A 138 SHEET 5 AA1 5 PHE A 53 THR A 56 -1 N SER A 55 O TYR A 149 SHEET 1 AA2 3 SER A 18 THR A 23 0 SHEET 2 AA2 3 GLY A 79 THR A 84 -1 O VAL A 83 N SER A 19 SHEET 3 AA2 3 SER A 160 ASN A 166 -1 O GLU A 162 N LYS A 82 SHEET 1 AA3 2 ILE A 316 ALA A 317 0 SHEET 2 AA3 2 ALA A 320 VAL A 321 -1 O ALA A 320 N ALA A 317 SHEET 1 AA4 4 TYR A 394 TRP A 398 0 SHEET 2 AA4 4 GLU A 413 ALA A 422 -1 O LYS A 419 N SER A 397 SHEET 3 AA4 4 ALA A 485 HIS A 492 -1 O VAL A 489 N HIS A 416 SHEET 4 AA4 4 ASP A 442 VAL A 443 -1 N ASP A 442 O HIS A 492 SHEET 1 AA5 9 TYR A 394 TRP A 398 0 SHEET 2 AA5 9 GLU A 413 ALA A 422 -1 O LYS A 419 N SER A 397 SHEET 3 AA5 9 ALA A 485 HIS A 492 -1 O VAL A 489 N HIS A 416 SHEET 4 AA5 9 HIS A 449 VAL A 452 -1 N HIS A 449 O HIS A 488 SHEET 5 AA5 9 ARG A 455 ARG A 462 -1 O ILE A 457 N ILE A 450 SHEET 6 AA5 9 VAL A 468 PRO A 473 -1 O ARG A 472 N ARG A 460 SHEET 7 AA5 9 GLY A 431 PRO A 435 -1 N LEU A 434 O THR A 469 SHEET 8 AA5 9 SER A 508 VAL A 518 -1 O GLY A 510 N LEU A 433 SHEET 9 AA5 9 THR A 521 PHE A 530 -1 O THR A 521 N VAL A 518 SHEET 1 AA6 2 LEU A 427 PRO A 428 0 SHEET 2 AA6 2 TYR A 478 VAL A 479 -1 O VAL A 479 N LEU A 427 SHEET 1 AA7 5 PHE B 12 GLU B 15 0 SHEET 2 AA7 5 LEU B 88 ALA B 93 -1 O VAL B 91 N PHE B 12 SHEET 3 AA7 5 VAL B 134 PRO B 139 1 O VAL B 135 N LEU B 92 SHEET 4 AA7 5 VAL B 147 ASN B 151 -1 O GLU B 148 N LEU B 138 SHEET 5 AA7 5 PHE B 53 THR B 56 -1 N SER B 55 O TYR B 149 SHEET 1 AA8 3 SER B 18 THR B 23 0 SHEET 2 AA8 3 GLY B 79 THR B 84 -1 O VAL B 83 N SER B 19 SHEET 3 AA8 3 SER B 160 ASN B 166 -1 O GLU B 162 N LYS B 82 SHEET 1 AA9 4 TYR B 394 TRP B 398 0 SHEET 2 AA9 4 GLY B 412 ALA B 422 -1 O LYS B 419 N SER B 397 SHEET 3 AA9 4 ALA B 485 ARG B 493 -1 O ARG B 493 N GLY B 412 SHEET 4 AA9 4 ASP B 442 VAL B 443 -1 N ASP B 442 O HIS B 492 SHEET 1 AB1 9 TYR B 394 TRP B 398 0 SHEET 2 AB1 9 GLY B 412 ALA B 422 -1 O LYS B 419 N SER B 397 SHEET 3 AB1 9 ALA B 485 ARG B 493 -1 O ARG B 493 N GLY B 412 SHEET 4 AB1 9 HIS B 449 VAL B 452 -1 N HIS B 449 O HIS B 488 SHEET 5 AB1 9 ARG B 455 ALA B 463 -1 O ARG B 455 N VAL B 452 SHEET 6 AB1 9 VAL B 468 PRO B 473 -1 O PHE B 470 N ARG B 462 SHEET 7 AB1 9 GLY B 431 PRO B 435 -1 N LEU B 434 O THR B 469 SHEET 8 AB1 9 SER B 508 VAL B 518 -1 O LEU B 512 N GLY B 431 SHEET 9 AB1 9 THR B 521 PHE B 530 -1 O LEU B 529 N ILE B 509 SHEET 1 AB2 2 ILE B 405 ARG B 407 0 SHEET 2 AB2 2 GLU B 532 LYS B 534 1 O GLU B 532 N ILE B 406 SHEET 1 AB3 2 LEU B 427 PRO B 428 0 SHEET 2 AB3 2 TYR B 478 VAL B 479 -1 O VAL B 479 N LEU B 427 SSBOND 1 CYS A 186 CYS A 201 1555 1555 2.27 SSBOND 2 CYS A 461 CYS A 471 1555 1555 2.06 SSBOND 3 CYS B 186 CYS B 201 1555 1555 2.22 SSBOND 4 CYS B 461 CYS B 471 1555 1555 2.05 CISPEP 1 SER B 494 SER B 495 0 0.78 CISPEP 2 SER B 495 SER B 496 0 -10.34 CRYST1 47.440 141.280 176.020 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021079 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007078 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005681 0.00000